Miyakogusa Predicted Gene

Lj5g3v1794730.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1794730.1 Non Characterized Hit- tr|B9T7P5|B9T7P5_RICCO
Microtubule associated protein xmap215, putative
OS=Ri,82.12,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; MICROTUBULE
ASSOCIATED PROTEIN XMAP215,NULL; no description,Arma,CUFF.55976.1
         (662 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g094165.1 | microtubule organization protein | HC | chr1:4...  1070   0.0  
Medtr8g023010.1 | microtubule organization protein | HC | chr8:8...  1028   0.0  
Medtr8g026860.1 | microtubule organization protein | LC | chr8:9...   232   8e-61
Medtr8g027640.1 | microtubule organization protein | HC | chr8:9...   136   6e-32

>Medtr1g094165.1 | microtubule organization protein | HC |
           chr1:42365655-42345958 | 20130731
          Length = 2024

 Score = 1070 bits (2768), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 531/659 (80%), Positives = 568/659 (86%), Gaps = 4/659 (0%)

Query: 1   MSSXXXXXXXXXXXXPWEDRLFHKNWKVRSEANVDLASLCDSISDPKDSRIREFGPFFRK 60
           MSS            PWEDRL HKNWKVR+EAN+DLASLCDSI+DPKD RIREFG FF+K
Sbjct: 1   MSSEEEKLLKEAKKLPWEDRLSHKNWKVRNEANIDLASLCDSITDPKDPRIREFGHFFKK 60

Query: 61  TVADSNAPVQEKALDALIAYLRAADADAGRFGKEVCDAIVAKCMTGRPKTVEKAQAVFML 120
           TV+DSNAPVQEKALDALIAYLRAADADA RFGKEVCDA+VAKC+TGRPKTVEKAQAVF+L
Sbjct: 61  TVSDSNAPVQEKALDALIAYLRAADADASRFGKEVCDAVVAKCLTGRPKTVEKAQAVFLL 120

Query: 121 WVELEAVDAFLDAMEKAIKHKVSKAVVPAIDVMFQALSEFGAKVVPPKRILKMLPELFEH 180
           WVELEAVDAFLDAMEKAIK+KV+KAVVPAIDVMFQALSEFG+K+VPPKRILKMLPELF+H
Sbjct: 121 WVELEAVDAFLDAMEKAIKNKVAKAVVPAIDVMFQALSEFGSKIVPPKRILKMLPELFDH 180

Query: 181 QDQNVRACSKGLTLELCRWIGKDSVKSILFEKMRDTMKKELETELVNVSGAGKPSRKIRS 240
           QDQNVRA SKGLTLELCRWIGKD+VKSILFEKMRDTMKKELE E+VNV+G  KPSRKIRS
Sbjct: 181 QDQNVRASSKGLTLELCRWIGKDNVKSILFEKMRDTMKKELEAEVVNVTGIAKPSRKIRS 240

Query: 241 EQDKEPELEAVSETVGPGPSEESGTDAPQEIDEYELVDPVDILTPLEKSGFWDGVKATKW 300
           EQDKEPE E +SE VG GP+EESG+DAPQEIDEYELVDPVDILTPLEKSGFWDGVKATKW
Sbjct: 241 EQDKEPEQETISEVVGAGPAEESGSDAPQEIDEYELVDPVDILTPLEKSGFWDGVKATKW 300

Query: 301 SERKEAVAELTKLASTKRISPGDFSEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTH 360
            ERKEAV ELTKLASTKRISPGDFSEVCRTLKKLITDVNIAVAVEA+QAIGNLARGLRT+
Sbjct: 301 LERKEAVGELTKLASTKRISPGDFSEVCRTLKKLITDVNIAVAVEAVQAIGNLARGLRTN 360

Query: 361 FSASCRFXXXXXXXXXXXXXXXXADALTQTLQAMHKAGCIGLIDVVEDVKIATKNKVPLV 420
           FSAS RF                 +AL+QTLQA+HKAGCI L+DVVEDVKIATKNKVPLV
Sbjct: 361 FSASSRFLLPVLLEKLKEKKPTMTEALSQTLQAIHKAGCISLVDVVEDVKIATKNKVPLV 420

Query: 421 RSLTLTWVTFCIESSNKGIITKMHKDYVPILMESLNDGTPEVRDXXXXXXXXXXKSVGMR 480
           RS T+TWVTFCIE+SNKGIITK+HKDYVPI ME LNDGTPEVRD          KSVGMR
Sbjct: 421 RSSTMTWVTFCIETSNKGIITKVHKDYVPICMECLNDGTPEVRDAAFSALAAIAKSVGMR 480

Query: 481 PLEKSLEKLDDVRRKKLSEMISGSEDALPGGSSTALVQNTRXXXXXXXXXXXXFVKRSAT 540
           PLE+SLEKLDDVRRKKLSEMISGSEDA+PGGSST  VQN R               RSA 
Sbjct: 481 PLERSLEKLDDVRRKKLSEMISGSEDAVPGGSSTVSVQNARASASSTETGAPV---RSAA 537

Query: 541 SMLSGKRPVQAAPAVKKGGTAKSGTNKKADGNAQSKVSKSIEPPEDVEPTEMSLDEIESR 600
           SMLSGKRPVQ+AP  KKGG  KSGT+KK DG +Q K SKSIE PEDVEPTEM L+EIESR
Sbjct: 538 SMLSGKRPVQSAPVTKKGGAVKSGTSKKVDGVSQ-KASKSIETPEDVEPTEMGLEEIESR 596

Query: 601 IGSLINPDTINLLKSAVWKERLEAISSLKQQVEGLHDLDKSVEILIRLLCTLPGWGEKN 659
           IGSL+  DTI LLKSAVWKERLEAISSLKQQVEGL +LD+SVEILIRLLCTLPGWGEKN
Sbjct: 597 IGSLLQSDTITLLKSAVWKERLEAISSLKQQVEGLQNLDQSVEILIRLLCTLPGWGEKN 655


>Medtr8g023010.1 | microtubule organization protein | HC |
           chr8:8209525-8188523 | 20130731
          Length = 1897

 Score = 1028 bits (2659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 511/647 (78%), Positives = 555/647 (85%), Gaps = 5/647 (0%)

Query: 17  WEDRLFHKNWKVRSEANVDLASLCDSISDPKDSRIREFGPFFRKTVADSNAPVQEKALDA 76
           WEDRL HKNWKVR++AN+DLASL  SI+DP D RIR+FG +F+KTVADSNA VQEKALDA
Sbjct: 18  WEDRLSHKNWKVRNDANIDLASLFHSITDPNDPRIRQFGHYFKKTVADSNAAVQEKALDA 77

Query: 77  LIAYLRAADADAGRFGKEVCDAIVAKCMTGRPKTVEKAQAVFMLWVELEAVDAFLDAMEK 136
           LIAYL AADADA RFGKEVCDA+VAKC+TGRPKTVEKAQAVF+LWVELEAVDAFLDAMEK
Sbjct: 78  LIAYLHAADADAARFGKEVCDAVVAKCLTGRPKTVEKAQAVFLLWVELEAVDAFLDAMEK 137

Query: 137 AIKHKVSKAVVPAIDVMFQALSEFGAKVVPPKRILKMLPELFEHQDQNVRACSKGLTLEL 196
           AIK+KV+KAVVPAIDVMFQALSEFGAK+VPPKRIL+MLPELF+HQDQNVRA SKGLTLEL
Sbjct: 138 AIKNKVAKAVVPAIDVMFQALSEFGAKIVPPKRILRMLPELFDHQDQNVRASSKGLTLEL 197

Query: 197 CRWIGKDSVKSILFEKMRDTMKKELETELVNVSGAGKPSRKIRSEQDKEPELEAVSETVG 256
           CRWIGK++VKSILFEKMRDTMKKELE E+VNV+G  KPSRKIRSEQDKEPE E++SE VG
Sbjct: 198 CRWIGKENVKSILFEKMRDTMKKELEAEVVNVTGTAKPSRKIRSEQDKEPEQESISEVVG 257

Query: 257 PGPSEESGTDAPQEIDEYELVDPVDILTPLEKSGFWDGVKATKWSERKEAVAELTKLAST 316
           PGP+EESG+DAPQEIDEYELVDPVDIL PLEKSGFW GVKATKW ERKEAV ELTKLAST
Sbjct: 258 PGPAEESGSDAPQEIDEYELVDPVDILIPLEKSGFWKGVKATKWLERKEAVGELTKLAST 317

Query: 317 KRISPGDFSEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSASCRFXXXXXXXXX 376
           KRISPG+FSEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRT+FSAS RF         
Sbjct: 318 KRISPGEFSEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTNFSASSRFLLPVLLEKL 377

Query: 377 XXXXXXXADALTQTLQAMHKAGCIGLIDVVEDVKIATKNKVPLVRSLTLTWVTFCIESSN 436
                   +AL+QTLQA+HKAGCI L+D+VEDVK +TKNKVPLVRSLT+TWVTFCIE+SN
Sbjct: 378 KEKKPTMTEALSQTLQAIHKAGCISLVDIVEDVKKSTKNKVPLVRSLTMTWVTFCIETSN 437

Query: 437 KGIITKMHKDYVPILMESLNDGTPEVRDXXXXXXXXXXKSVGMRPLEKSLEKLDDVRRKK 496
           KGIITK+HKDYVPI M+ LNDGTPEVRD          K VGMRPLE+SLEKLDDVR+KK
Sbjct: 438 KGIITKVHKDYVPICMDCLNDGTPEVRDAAFSALTAIAKLVGMRPLERSLEKLDDVRKKK 497

Query: 497 LSEMISGSEDALPGGSSTALVQNTRXXXXXXXXXXXXFVK---RSATSMLSGKRPVQAA- 552
           LSEMISGSEDA+PGGSSTA VQN R                  +SA SML GKRPVQAA 
Sbjct: 498 LSEMISGSEDAVPGGSSTASVQNIRASASSAEVVVNFIFYAPIKSAASMLLGKRPVQAAV 557

Query: 553 PAVKKGGTAKSGTNKKADGNAQSKVSKSIEPPEDVEPTEMSLDEIESRIGSLINPDTINL 612
           P  KKGG  KSGT KK DG +Q K SKSIE PEDVEPTEM L+EIES+IGSLI  DTI L
Sbjct: 558 PVTKKGGVVKSGTKKKVDGVSQ-KASKSIETPEDVEPTEMGLEEIESQIGSLIQSDTIAL 616

Query: 613 LKSAVWKERLEAISSLKQQVEGLHDLDKSVEILIRLLCTLPGWGEKN 659
           LK A WKERLEAISSLKQQVEGL +LD+SVEILIRLLCTLPGWGEKN
Sbjct: 617 LKGAGWKERLEAISSLKQQVEGLQNLDQSVEILIRLLCTLPGWGEKN 663


>Medtr8g026860.1 | microtubule organization protein | LC |
           chr8:9336813-9333855 | 20130731
          Length = 251

 Score =  232 bits (592), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 136/254 (53%), Positives = 162/254 (63%), Gaps = 30/254 (11%)

Query: 17  WEDRLFHKNWKVRSEANVDLASLCDSISDPKDSRIREFGPFFRKTVADSNAPVQEKALDA 76
           W+D LFH NW+VRSEAN+DLAS+C SI DPKD RI EF         +SN  VQ KALDA
Sbjct: 5   WKDSLFHSNWEVRSEANIDLASICKSIIDPKDPRILEF--------VESNVDVQLKALDA 56

Query: 77  LIAYLRAADADAGRF-GKEVCDAIV-AKCMTGRPKTVEKAQAVFMLWVELEAVDAFLDAM 134
           LIAYLRAADADAGRF GK+VCDAIV +KC+  + KTV+KAQ V +LWVEL AVDAFL  +
Sbjct: 57  LIAYLRAADADAGRFFGKKVCDAIVDSKCLVRKRKTVKKAQEVLLLWVELGAVDAFLSPV 116

Query: 135 EKAIKHKVSKAVVPAIDVMFQALSEFGAKVVPPKRILKMLPELFEHQDQNVRACSKGLTL 194
                  V+  +            EFGAK+VP  RILKMLPEL+ H D+NVR   K L L
Sbjct: 117 YARTHKNVAYCIFT---------REFGAKIVPAIRILKMLPELYNHHDRNVRGSYKWLIL 167

Query: 195 ELCRWIGKDSVKSILFEKMRDTMK-KELETELVNVSGAGKPSRKIRSEQDKEPELEAVSE 253
           EL RWI KD VKSI F K R T+     E  L+++         +RSEQDK    E +S 
Sbjct: 168 ELYRWISKDDVKSIWFGKRRCTLSLYRGEAILISIPPF------LRSEQDK----ETISV 217

Query: 254 TVGPGPSEESGTDA 267
            +G GP++ S  DA
Sbjct: 218 VMGHGPAKVSVPDA 231


>Medtr8g027640.1 | microtubule organization protein | HC |
           chr8:9941657-9941154 | 20130731
          Length = 89

 Score =  136 bits (343), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 71/106 (66%), Positives = 78/106 (73%), Gaps = 17/106 (16%)

Query: 134 MEKAIKHKVSKAVVPAIDVMFQALSEFGAKVVPPKRILKMLPELFEHQDQNVRACSKGLT 193
           MEK IK K +KAVVPAIDVMFQALSEFGAK+VPPKRILK+LPELF+HQDQNV A SK LT
Sbjct: 1   MEKVIKKKFAKAVVPAIDVMFQALSEFGAKIVPPKRILKVLPELFDHQDQNVSASSKWLT 60

Query: 194 LELCRWIGKDSVKSILFEKMRDTMKKELETELVNVSGAGKPSRKIR 239
           LELC                  TMKKE E E+VNV+G  KPSR+IR
Sbjct: 61  LELCH-----------------TMKKEWEAEVVNVTGTAKPSRRIR 89