Miyakogusa Predicted Gene

Lj5g3v1794730.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1794730.1 Non Chatacterized Hit- tr|B9T7P5|B9T7P5_RICCO
Microtubule associated protein xmap215, putative
OS=Ri,82.12,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; MICROTUBULE
ASSOCIATED PROTEIN XMAP215,NULL; no description,Arma,CUFF.55976.1
         (662 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G35630.1 | Symbols: MOR1, GEM1 | ARM repeat superfamily prote...   936   0.0  

>AT2G35630.1 | Symbols: MOR1, GEM1 | ARM repeat superfamily protein
           | chr2:14966828-14980361 FORWARD LENGTH=1978
          Length = 1978

 Score =  936 bits (2418), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/647 (71%), Positives = 532/647 (82%), Gaps = 2/647 (0%)

Query: 16  PWEDRLFHKNWKVRSEANVDLASLCDSISDPKDSRIREFGPFFRKTVADSNAPVQEKALD 75
           PWEDRL HKNWKVR+EANVDLAS+ DSI+DPKD R+R+FG  FRKTVADSNAPVQEKALD
Sbjct: 16  PWEDRLGHKNWKVRNEANVDLASVFDSITDPKDPRLRDFGHLFRKTVADSNAPVQEKALD 75

Query: 76  ALIAYLRAADADAGRFGKEVCDAIVAKCMTGRPKTVEKAQAVFMLWVELEAVDAFLDAME 135
           ALIA+LRAAD+DAGR+ KEVCDAI  KC+TGR  TV+KAQA F+LWVELEAVD FLD ME
Sbjct: 76  ALIAFLRAADSDAGRYAKEVCDAIALKCLTGRKNTVDKAQAAFLLWVELEAVDVFLDTME 135

Query: 136 KAIKHKVSKAVVPAIDVMFQALSEFGAKVVPPKRILKMLPELFEHQDQNVRACSKGLTLE 195
           KAIK+KV+KAVVPA+DVMFQALSEFG+KV+PPKRILKMLPELF+HQDQNVRA +KG+TLE
Sbjct: 136 KAIKNKVAKAVVPAVDVMFQALSEFGSKVIPPKRILKMLPELFDHQDQNVRASAKGVTLE 195

Query: 196 LCRWIGKDSVKSILFEKMRDTMKKELETELVNVSGAGKPSRKIRSEQDKEPELEAVSETV 255
           LCRWIGKD VKSILFEKMRDTMKKELE EL NV+   KP+RKIRSEQDKEPE EA S+ V
Sbjct: 196 LCRWIGKDPVKSILFEKMRDTMKKELEAELANVTAGAKPTRKIRSEQDKEPEAEASSDVV 255

Query: 256 GPGPSEESGTDAPQEIDEYELVDPVDILTPLEKSGFWDGVKATKWSERKEAVAELTKLAS 315
           G GPSEE+  DAPQEIDEY+L+DPVDILTPLEKSGFWDGVKATKWSERKEAVAELTKLAS
Sbjct: 256 GDGPSEEAVADAPQEIDEYDLMDPVDILTPLEKSGFWDGVKATKWSERKEAVAELTKLAS 315

Query: 316 TKRISPGDFSEVCRTLKKLITDVNIAVAVEAIQAIGNLARGLRTHFSASCRFXXXXXXXX 375
           TK+I+PGDFSE+CRTLKKLITDVN+AVAVEAIQAIGNLA GLRTHFSAS RF        
Sbjct: 316 TKKIAPGDFSEICRTLKKLITDVNLAVAVEAIQAIGNLACGLRTHFSASSRFMLPVLLEK 375

Query: 376 XXXXXXXXADALTQTLQAMHKAGCIGLIDVVEDVKIATKNKVPLVRSLTLTWVTFCIESS 435
                    D LTQTLQ M+KAGC+ L+DV+EDVK A KNKVPLVRS TLTW+TFC+E+S
Sbjct: 376 LKEKKQSVTDPLTQTLQTMYKAGCLNLVDVIEDVKTAVKNKVPLVRSSTLTWLTFCLETS 435

Query: 436 NKGIITKMHKDYVPILMESLNDGTPEVRDXXXXXXXXXXKSVGMRPLEKSLEKLDDVRRK 495
           NK +I K HK+YVP+ ME LNDGTP+VRD          KSVGMRPLE+SLEKLDDVR+K
Sbjct: 436 NKALILKAHKEYVPLCMECLNDGTPDVRDAAFSALAAIAKSVGMRPLERSLEKLDDVRKK 495

Query: 496 KLSEMISGSEDALPGGSSTALVQNTRXXXXXXXXXXXXFVKRSATSMLSGKRPVQAAPAV 555
           KLSEMI+GS      G+S+  VQ++             FV++SA SMLSGKRP  +A A 
Sbjct: 496 KLSEMIAGSGGGDQAGTSSVTVQSS-VGSTATGNSDASFVRKSAASMLSGKRPAPSAQA- 553

Query: 556 KKGGTAKSGTNKKADGNAQSKVSKSIEPPEDVEPTEMSLDEIESRIGSLINPDTINLLKS 615
            K          K DG+ +++ SKS+EPPEDVEP EM L+EIE+R+GSL+ P+T++ LKS
Sbjct: 554 SKKVGTGKPGGGKKDGSVRNEGSKSVEPPEDVEPAEMGLEEIENRLGSLVKPETVSQLKS 613

Query: 616 AVWKERLEAISSLKQQVEGLHDLDKSVEILIRLLCTLPGWGEKNVQV 662
           +VWKERLEA  +LK+++EGL +LDKSVEIL+RLLC +PGW EKNVQV
Sbjct: 614 SVWKERLEATLALKEEIEGLQELDKSVEILVRLLCAVPGWNEKNVQV 660