Miyakogusa Predicted Gene
- Lj5g3v1513560.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1513560.1 Non Chatacterized Hit- tr|I3T2U3|I3T2U3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.1,0,Di19,Drought induced 19/ RING finger protein 114;
seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAM,CUFF.55410.1
(666 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59236 similar to UniRef100_Q8GT87 Cluster: Fiber prot... 1320 0.0
gnl|LJGI|TC73239 similar to UniRef100_A7Q8K7 Cluster: Chromosome... 640 0.0
gnl|LJGI|AV770146 similar to UniRef100_Q84J70 Cluster: Protein D... 153 2e-36
>gnl|LJGI|TC59236 similar to UniRef100_Q8GT87 Cluster: Fiber protein Fb2; n=1;
Gossypium barbadense|Rep: Fiber protein Fb2 - Gossypium
barbadense (Sea-island cotton) (Egyptian cotton),
partial (67%)
Length = 981
Score = 1320 bits (666), Expect = 0.0
Identities = 666/666 (100%)
Strand = Plus / Plus
Query: 1 atggacgctgattcctcttggactgctcgtctctcttctgcctccaggcgctatcaatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 atggacgctgattcctcttggactgctcgtctctcttctgcctccaggcgctatcaatcc 214
Query: 61 gctctccaatctcgatcagatatgttcatgggttttgatgaaaatgatgtggacgatgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gctctccaatctcgatcagatatgttcatgggttttgatgaaaatgatgtggacgatgac 274
Query: 121 gtaagggaggagtttctatgccccttttgttcggagtattttgatatcgttggattgtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gtaagggaggagtttctatgccccttttgttcggagtattttgatatcgttggattgtgc 334
Query: 181 tgccacattgatgaagagcatccaatggaggcgaagaatggggtatgtccagtttgtgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgccacattgatgaagagcatccaatggaggcgaagaatggggtatgtccagtttgtgca 394
Query: 241 tcgagggtgggggttgatatggtagcgcacattaccctacaacatggaaatatatttaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tcgagggtgggggttgatatggtagcgcacattaccctacaacatggaaatatatttaag 454
Query: 301 atgcagcgcaaaaggaaatcacgtaaaggtgggtcttattcaacgctatcattattgagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 atgcagcgcaaaaggaaatcacgtaaaggtgggtcttattcaacgctatcattattgagg 514
Query: 361 aaggaactgcgagaaggaaatttgcaatccctttttggtgggtcttcgtgtatagtgtcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aaggaactgcgagaaggaaatttgcaatccctttttggtgggtcttcgtgtatagtgtcc 574
Query: 421 tcatctaattctgcagctgatccactgttgtcgtcgtttatatcgcctttagctaatgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tcatctaattctgcagctgatccactgttgtcgtcgtttatatcgcctttagctaatgaa 634
Query: 481 cctaccagttctcagcctcatttgcacactgagacaagatcaaccaagaaaagcttggat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 cctaccagttctcagcctcatttgcacactgagacaagatcaaccaagaaaagcttggat 694
Query: 541 gagactgtatcaaaaaggaatgtggagacaccaaccttgtcagacaaagataaggaggag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 gagactgtatcaaaaaggaatgtggagacaccaaccttgtcagacaaagataaggaggag 754
Query: 601 aatgcaaaaagatgtgagtttgttcaaggtatgttgctgtccaccatgttggatgacgac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 aatgcaaaaagatgtgagtttgttcaaggtatgttgctgtccaccatgttggatgacgac 814
Query: 661 ttatga 666
||||||
Sbjct: 815 ttatga 820
>gnl|LJGI|TC73239 similar to UniRef100_A7Q8K7 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 533
Score = 640 bits (323), Expect = 0.0
Identities = 323/323 (100%)
Strand = Plus / Plus
Query: 344 cgctatcattattgaggaaggaactgcgagaaggaaatttgcaatccctttttggtgggt 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgctatcattattgaggaaggaactgcgagaaggaaatttgcaatccctttttggtgggt 60
Query: 404 cttcgtgtatagtgtcctcatctaattctgcagctgatccactgttgtcgtcgtttatat 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttcgtgtatagtgtcctcatctaattctgcagctgatccactgttgtcgtcgtttatat 120
Query: 464 cgcctttagctaatgaacctaccagttctcagcctcatttgcacactgagacaagatcaa 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgcctttagctaatgaacctaccagttctcagcctcatttgcacactgagacaagatcaa 180
Query: 524 ccaagaaaagcttggatgagactgtatcaaaaaggaatgtggagacaccaaccttgtcag 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccaagaaaagcttggatgagactgtatcaaaaaggaatgtggagacaccaaccttgtcag 240
Query: 584 acaaagataaggaggagaatgcaaaaagatgtgagtttgttcaaggtatgttgctgtcca 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acaaagataaggaggagaatgcaaaaagatgtgagtttgttcaaggtatgttgctgtcca 300
Query: 644 ccatgttggatgacgacttatga 666
|||||||||||||||||||||||
Sbjct: 301 ccatgttggatgacgacttatga 323
>gnl|LJGI|AV770146 similar to UniRef100_Q84J70 Cluster: Protein DEHYDRATION-INDUCED 19
homolog 3; n=1; Arabidopsis thaliana|Rep: Protein
DEHYDRATION-INDUCED 19 homolog 3 - Arabidopsis thaliana
(Mouse-ear cress), partial (16%)
Length = 503
Score = 153 bits (77), Expect = 2e-36
Identities = 80/81 (98%)
Strand = Plus / Minus
Query: 222 ggtatgtccagtttgtgcatcgagggtgggggttgatatggtagcgcacattaccctaca 281
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 ggtatgtccagtttgtgcatcgagggtgggggttgatatggtagcgcacattaccctacc 174
Query: 282 acatggaaatatatttaagat 302
|||||||||||||||||||||
Sbjct: 173 acatggaaatatatttaagat 153
Score = 63.9 bits (32), Expect = 1e-09
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 192 tgaagagcatccaatggaggcgaagaatggggtatg 227
|||||||||||| |||||||||||||||||||||||
Sbjct: 503 tgaagagcatcccatggaggcgaagaatggggtatg 468