Miyakogusa Predicted Gene
- Lj5g3v1496780.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1496780.1 Non Characterized Hit- tr|J3M7X9|J3M7X9_ORYBR
Uncharacterized protein OS=Oryza brachyantha GN=OB05G2,32.32,4e-18,no
description,NULL; PWWP DOMAIN-CONTAINING PROTEIN,NULL; PWWP,PWWP;
seg,NULL; Tudor/PWWP/MBT,NULL; ,CUFF.55355.1
(297 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g113180.1 | tudor/PWWP/MBT superfamily protein | HC | chr7... 328 4e-90
Medtr1g072780.2 | PWWP domain protein | HC | chr1:32307252-32311... 97 2e-20
Medtr1g072780.1 | PWWP domain protein | HC | chr1:32307252-32311... 97 2e-20
Medtr1g066890.1 | PWWP domain protein | HC | chr1:28755074-28752... 92 8e-19
Medtr2g104120.2 | PWWP domain protein | HC | chr2:44863629-44866... 87 2e-17
Medtr2g104120.1 | PWWP domain protein | HC | chr2:44863586-44866... 87 2e-17
Medtr6g005840.2 | PWWP domain protein | HC | chr6:998887-1002434... 87 2e-17
Medtr6g005840.1 | PWWP domain protein | HC | chr6:998884-1002403... 87 2e-17
Medtr1g049120.1 | PWWP domain protein | HC | chr1:18965627-18971... 84 1e-16
Medtr1g049120.2 | PWWP domain protein | HC | chr1:18965539-18969... 84 1e-16
Medtr4g036445.1 | PWWP domain protein | LC | chr4:13118547-13115... 84 2e-16
Medtr2g104980.1 | PWWP domain protein | HC | chr2:45248589-45246... 79 4e-15
Medtr6g005960.1 | PWWP domain protein | LC | chr6:918536-915636 ... 70 2e-12
>Medtr7g113180.1 | tudor/PWWP/MBT superfamily protein | HC |
chr7:46596764-46591846 | 20130731
Length = 1114
Score = 328 bits (841), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 170/293 (58%), Positives = 193/293 (65%), Gaps = 22/293 (7%)
Query: 26 GSERNGE------LSMGFEVGDMVWAKVKSHPWWPGHIYNEAFASAAVRRSKREGLVLVA 79
SERN E L GFEVGD+VW KVKSHPWWPGHIYN+AFAS +VRR++REG VLVA
Sbjct: 70 ASERNTEPETETDLGYGFEVGDLVWGKVKSHPWWPGHIYNQAFASPSVRRARREGHVLVA 129
Query: 80 FFGDSSYGWFESAELIPFDANFAEKSRQVNSRAFLKXXXXXXXXXXXXXXLGLVCRCRNA 139
FFGDSSYGWFE ELIPF+ANFAEKS+Q SR F+K LGL C+CRN
Sbjct: 130 FFGDSSYGWFEPDELIPFEANFAEKSQQTYSRTFVKAVEEAVDEASRRRGLGLACKCRNP 189
Query: 140 NIFHPTTVPGYFSVHVPDSEP-GIYSTAQIRKAINGFGPAEALAFVKQFASAPHGGGHRS 198
N F T V GY+SV V D EP G YS QI+KA + F P E L FV+ A AP G H S
Sbjct: 190 NNFRATKVQGYYSVDVNDYEPDGFYSENQIKKARDSFNPIETLDFVRDLAFAPLDGEHGS 249
Query: 199 IGFTKNKAAVVGFRRGVFEQYDEPYALAF---------------DQPVGHPIRAPLSGLL 243
I F +NKA V +R+ VFEQYDE YA AF +QP P +APLSG L
Sbjct: 250 IDFVQNKATVYAYRKAVFEQYDETYAQAFGVQRSRPSRPQNVPLNQPARQPPKAPLSGPL 309
Query: 244 VTGETLGGRKKTPKSPKVKDNSKKDNYIFKRRDEPSDCFQLTTKEDTPDAAEK 296
V ETLGG K KS K K+NSKKD Y+FKRRD+PSD QLT KE+ PDAAE+
Sbjct: 310 VIAETLGGGKSATKSVKFKENSKKDRYLFKRRDDPSDSSQLTYKEEIPDAAER 362
>Medtr1g072780.2 | PWWP domain protein | HC | chr1:32307252-32311486
| 20130731
Length = 994
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 89/204 (43%), Gaps = 6/204 (2%)
Query: 10 APPSSTVDHGEPSESNGSERNGELSMGFEVGDMVWAKVKSHPWWPGHIYNEAFASAAVRR 69
A V HG S S R G+ F V D+VW KV+SHPWWPG I++ + ASA +
Sbjct: 339 ASDGKVVKHGPVKSSGKSRREGK----FSVNDLVWGKVRSHPWWPGQIFDPSDASAQAMK 394
Query: 70 SKREGLVLVAFFGDSSYGWFESAELIPFDANFAEKSRQVNSRAFLKXXXXXXXXXXXXXX 129
R+ LVA++GD +Y W E ++L F ++F+ +Q N F
Sbjct: 395 HFRKNCYLVAYYGDGTYAWNEGSKLKSFRSHFSYIEKQKNLEVFRSAVDSALDEVKRRVE 454
Query: 130 LGLVCRCRNANIFHPTTVPGYFSVHVPDSEPGIYSTAQIRKAINGFGPAEALAFVKQFAS 189
GL C C + + + + + EP + F P + + ++K +
Sbjct: 455 FGLACSCIPKDTYDKIKLQVVENCGIR-QEPSLVHRVDESLNATSFSPEKLMEYLKALSK 513
Query: 190 APHGGGHRSIGFTKNKAAVVGFRR 213
GG R + T KA ++ F R
Sbjct: 514 FSTGGFDR-LELTTAKAQLLAFYR 536
>Medtr1g072780.1 | PWWP domain protein | HC | chr1:32307252-32311193
| 20130731
Length = 994
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 89/204 (43%), Gaps = 6/204 (2%)
Query: 10 APPSSTVDHGEPSESNGSERNGELSMGFEVGDMVWAKVKSHPWWPGHIYNEAFASAAVRR 69
A V HG S S R G+ F V D+VW KV+SHPWWPG I++ + ASA +
Sbjct: 339 ASDGKVVKHGPVKSSGKSRREGK----FSVNDLVWGKVRSHPWWPGQIFDPSDASAQAMK 394
Query: 70 SKREGLVLVAFFGDSSYGWFESAELIPFDANFAEKSRQVNSRAFLKXXXXXXXXXXXXXX 129
R+ LVA++GD +Y W E ++L F ++F+ +Q N F
Sbjct: 395 HFRKNCYLVAYYGDGTYAWNEGSKLKSFRSHFSYIEKQKNLEVFRSAVDSALDEVKRRVE 454
Query: 130 LGLVCRCRNANIFHPTTVPGYFSVHVPDSEPGIYSTAQIRKAINGFGPAEALAFVKQFAS 189
GL C C + + + + + EP + F P + + ++K +
Sbjct: 455 FGLACSCIPKDTYDKIKLQVVENCGIR-QEPSLVHRVDESLNATSFSPEKLMEYLKALSK 513
Query: 190 APHGGGHRSIGFTKNKAAVVGFRR 213
GG R + T KA ++ F R
Sbjct: 514 FSTGGFDR-LELTTAKAQLLAFYR 536
>Medtr1g066890.1 | PWWP domain protein | HC | chr1:28755074-28752288
| 20130731
Length = 928
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 24/171 (14%)
Query: 21 PSESNGSERNGELSMGFEVGDMVWAKVKSHPWWPGHIYNEAFASAAVRRSKREGLVLVAF 80
P ES SE N + V D+VW KV+SHPWWPG IY+ AS ++ ++E L+A+
Sbjct: 308 PRESESSEAN------YRVSDLVWGKVRSHPWWPGQIYDPLVASEKAKKQRKENCYLIAY 361
Query: 81 FGDSSYGWFESAELIPFDANFAEKSRQVNSRAFLKXXXXXXXXXXXXXXLGLVCRCRNAN 140
FGD ++ W +++ + PF +F+E +Q + F L C C
Sbjct: 362 FGDQTFAWNDTSMIKPFHKHFSEMEKQSDMENFRHAVDCALEEASRRVEFVLSCPC---- 417
Query: 141 IFHPTTVPGYFSVHVPDSEPGIYSTAQIRKAINGFGPAEALAFVKQFASAP 191
+PG ++ P + T I F P E + FVK A +P
Sbjct: 418 ------MPG-------ETYPEL-KTKVIANNAASFEPMELVNFVKSLAQSP 454
>Medtr2g104120.2 | PWWP domain protein | HC | chr2:44863629-44866684
| 20130731
Length = 854
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 19/179 (10%)
Query: 35 MGFEVGDMVWAKVKSHPWWPGHIYNEAFASAAVRRSKREGLVLVAFFGDSSYGWFESAEL 94
+ + V D+VW KV+ HPWWPG IY+ + AS R +E L+A+FGD ++ W + + +
Sbjct: 256 VNYRVSDLVWGKVRGHPWWPGQIYDPSVASEKARMHFKENCYLIAYFGDQTFAWNDVSVI 315
Query: 95 IPFDANFAEKSRQVNSRAFLKXXXXXXXXXXXXXXLGLVCRCRNANIFHPTTVPGYFSVH 154
PF +F E +Q + F GL C C +
Sbjct: 316 KPFHKHFTEMKKQNDLENFRHAVDCALEEASRRVEFGLSCPCMTGEV------------- 362
Query: 155 VPDSEPGIYSTAQIRKAINGFGPAEALAFVKQFASAPHGGGHRSIGFTKNKAAVVGFRR 213
P E + + A F P + + FVK A +P R + F ++A + F R
Sbjct: 363 SPKLETQLTANAAA-----SFEPTQLVNFVKSLAQSPLTEFDR-LEFVSSRAQLSAFYR 415
>Medtr2g104120.1 | PWWP domain protein | HC | chr2:44863586-44866594
| 20130731
Length = 854
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 19/179 (10%)
Query: 35 MGFEVGDMVWAKVKSHPWWPGHIYNEAFASAAVRRSKREGLVLVAFFGDSSYGWFESAEL 94
+ + V D+VW KV+ HPWWPG IY+ + AS R +E L+A+FGD ++ W + + +
Sbjct: 256 VNYRVSDLVWGKVRGHPWWPGQIYDPSVASEKARMHFKENCYLIAYFGDQTFAWNDVSVI 315
Query: 95 IPFDANFAEKSRQVNSRAFLKXXXXXXXXXXXXXXLGLVCRCRNANIFHPTTVPGYFSVH 154
PF +F E +Q + F GL C C +
Sbjct: 316 KPFHKHFTEMKKQNDLENFRHAVDCALEEASRRVEFGLSCPCMTGEV------------- 362
Query: 155 VPDSEPGIYSTAQIRKAINGFGPAEALAFVKQFASAPHGGGHRSIGFTKNKAAVVGFRR 213
P E + + A F P + + FVK A +P R + F ++A + F R
Sbjct: 363 SPKLETQLTANAAA-----SFEPTQLVNFVKSLAQSPLTEFDR-LEFVSSRAQLSAFYR 415
>Medtr6g005840.2 | PWWP domain protein | HC | chr6:998887-1002434 |
20130731
Length = 855
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 37 FEVGDMVWAKVKSHPWWPGHIYNEAFASAAVRRSKREGLVLVAFFGDSSYGWFESAELIP 96
F VGD VW K+KSHPWWPG +Y+ + AS + K+ +LVA+F D ++ W S++L P
Sbjct: 230 FSVGDFVWGKIKSHPWWPGRVYDLSNASELALKLKQNNRLLVAYF-DGTFAWCHSSQLKP 288
Query: 97 FDANFAEKSRQVNSRAFL----KXXXXXXXXXXXXXXLGLVCRCRNANIFHPTTVPG--- 149
F NF + RQ +S+AF + V + F P
Sbjct: 289 FKDNFDDMVRQGSSKAFTYAVQEAVNEVGRVLVTKMSRSFVVAEETKSEFAPMLAKNSGI 348
Query: 150 YFSVHVPDSEPGIYSTAQIRKAINGFGPAEALAFVKQFASAPHGGGHRSIGFTKNKAAVV 209
V VPDS GI S + + PAE L+ VKQ A + K + +
Sbjct: 349 KEGVFVPDS--GIESISAVT-----LEPAELLSQVKQIAEVIDIASILELEILKARLSAF 401
Query: 210 GFRRGVFEQ--YDEP---YALAFDQPVGHPIRAPLSG 241
F +G ++ Y+ P L V + + AP G
Sbjct: 402 YFSKGGYKLPCYEPPKLVLGLEDKDDVNNAVEAPSQG 438
>Medtr6g005840.1 | PWWP domain protein | HC | chr6:998884-1002403 |
20130731
Length = 897
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 37 FEVGDMVWAKVKSHPWWPGHIYNEAFASAAVRRSKREGLVLVAFFGDSSYGWFESAELIP 96
F VGD VW K+KSHPWWPG +Y+ + AS + K+ +LVA+F D ++ W S++L P
Sbjct: 272 FSVGDFVWGKIKSHPWWPGRVYDLSNASELALKLKQNNRLLVAYF-DGTFAWCHSSQLKP 330
Query: 97 FDANFAEKSRQVNSRAFL----KXXXXXXXXXXXXXXLGLVCRCRNANIFHPTTVPG--- 149
F NF + RQ +S+AF + V + F P
Sbjct: 331 FKDNFDDMVRQGSSKAFTYAVQEAVNEVGRVLVTKMSRSFVVAEETKSEFAPMLAKNSGI 390
Query: 150 YFSVHVPDSEPGIYSTAQIRKAINGFGPAEALAFVKQFASAPHGGGHRSIGFTKNKAAVV 209
V VPDS GI S + + PAE L+ VKQ A + K + +
Sbjct: 391 KEGVFVPDS--GIESISAVT-----LEPAELLSQVKQIAEVIDIASILELEILKARLSAF 443
Query: 210 GFRRGVFEQ--YDEP---YALAFDQPVGHPIRAPLSG 241
F +G ++ Y+ P L V + + AP G
Sbjct: 444 YFSKGGYKLPCYEPPKLVLGLEDKDDVNNAVEAPSQG 480
>Medtr1g049120.1 | PWWP domain protein | HC | chr1:18965627-18971838
| 20130731
Length = 938
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 3/178 (1%)
Query: 37 FEVGDMVWAKVKSHPWWPGHIYNEAFASAAVRRSKREGLVLVAFFGDSSYGWFESAELIP 96
F + DMVW KV+SHPWWPG I++ + AS ++ ++ VA+FGD ++ W E+++L
Sbjct: 290 FSLSDMVWGKVRSHPWWPGQIFDPSDASERAKKHYKKDCYFVAYFGDKTFAWNEASKLKH 349
Query: 97 FDANFAEKSRQVN-SRAFLKXXXXXXXXXXXXXXLGLVCRCRNANIFHPTTVPGYFSVHV 155
F A+F+ N S +F GL C C + + + V
Sbjct: 350 FRAHFSTIEEHRNRSESFQSAINCALDEVSRRVEYGLACSCIPKDTYDMIKSQTVENTGV 409
Query: 156 PDSEPGIYSTAQIRKAINGFGPAEALAFVKQFASAPHGGGHRSIGFTKNKAAVVGFRR 213
E I ++ F P + +VK + P G R + KA ++ + R
Sbjct: 410 -QQEISITHGVDESLNVDSFSPLNLIEYVKTLSEFPTAGFDR-LELVTAKAQLLAYNR 465
>Medtr1g049120.2 | PWWP domain protein | HC | chr1:18965539-18969182
| 20130731
Length = 938
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 3/178 (1%)
Query: 37 FEVGDMVWAKVKSHPWWPGHIYNEAFASAAVRRSKREGLVLVAFFGDSSYGWFESAELIP 96
F + DMVW KV+SHPWWPG I++ + AS ++ ++ VA+FGD ++ W E+++L
Sbjct: 290 FSLSDMVWGKVRSHPWWPGQIFDPSDASERAKKHYKKDCYFVAYFGDKTFAWNEASKLKH 349
Query: 97 FDANFAEKSRQVN-SRAFLKXXXXXXXXXXXXXXLGLVCRCRNANIFHPTTVPGYFSVHV 155
F A+F+ N S +F GL C C + + + V
Sbjct: 350 FRAHFSTIEEHRNRSESFQSAINCALDEVSRRVEYGLACSCIPKDTYDMIKSQTVENTGV 409
Query: 156 PDSEPGIYSTAQIRKAINGFGPAEALAFVKQFASAPHGGGHRSIGFTKNKAAVVGFRR 213
E I ++ F P + +VK + P G R + KA ++ + R
Sbjct: 410 -QQEISITHGVDESLNVDSFSPLNLIEYVKTLSEFPTAGFDR-LELVTAKAQLLAYNR 465
>Medtr4g036445.1 | PWWP domain protein | LC | chr4:13118547-13115726
| 20130731
Length = 622
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 3/178 (1%)
Query: 37 FEVGDMVWAKVKSHPWWPGHIYNEAFASAAVRRSKREGLVLVAFFGDSSYGWFESAELIP 96
F DMVW KVK++PWWPG I++ + AS + ++ VA+FGD S+ W E+++L
Sbjct: 314 FSFSDMVWGKVKTYPWWPGQIFDPSDASERAMKHYKKDCYFVAYFGDRSFAWNEASKLKD 373
Query: 97 FDANFAEKSRQVN-SRAFLKXXXXXXXXXXXXXXLGLVCRCRNANIFHPTTVPGYFSVHV 155
F A+F+ +Q + S++F GL C C + + + +
Sbjct: 374 FRAHFSTMEKQRSRSKSFQNAIDCALDEVSRRVEYGLACSCIPKDTYDMIKSQTVDNTGI 433
Query: 156 PDSEPGIYSTAQIRKAINGFGPAEALAFVKQFASAPHGGGHRSIGFTKNKAAVVGFRR 213
E I + ++ F P + + +VK + P G R + KA ++ F R
Sbjct: 434 R-QEISITRGVDESQNVDSFSPMKLIEYVKTQSKLPTSGLDR-LELVIAKAQLLAFNR 489
>Medtr2g104980.1 | PWWP domain protein | HC | chr2:45248589-45246991
| 20130731
Length = 453
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Query: 35 MGFEVGDMVWAKVKSHPWWPGHIYNEAFASAAVRRSKREGLVLVAFFGDSSYGWFESAEL 94
+ + V D+VW KV+ H WWPG IY + AS +R + L+A+FGD ++ W + + +
Sbjct: 231 VNYRVSDLVWGKVRGHSWWPGQIYVPSVASVKAKRHCKGNCYLIAYFGDQTFAWNDVSMI 290
Query: 95 IPFDANFAEKSRQVNSRAFLKXXXXXXXXXXXXXXLGLVCRC-----------RNANIFH 143
PF +F++ +Q + + F GL C C +A F
Sbjct: 291 KPFHKHFSQMEKQSDLKHFRHAVDCALEEASRHVEFGLSCPCMPGQALPKLNANDATSFE 350
Query: 144 PTTVPGYFSVHV 155
PT + + S H+
Sbjct: 351 PTELVNFKSEHI 362
>Medtr6g005960.1 | PWWP domain protein | LC | chr6:918536-915636 |
20130731
Length = 677
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 37 FEVGDMVWAKVKSHPWWPGHIYNEAFASAAVRRSKREGLVLVAFFGDSSYGWFESAELIP 96
F VGD VW K+KSH WWPG +Y+ + A + K++ +LVA+F D ++ W ++L P
Sbjct: 212 FSVGDFVWGKIKSHLWWPGRVYDPSDAPELALKLKQKNRLLVAYF-DGTFAWCHPSQLKP 270
Query: 97 FDANFAEKSRQVNSRAF 113
F NF RQ +S+ F
Sbjct: 271 FKDNFDNMVRQGSSKPF 287