Miyakogusa Predicted Gene

Lj5g3v1496780.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1496780.1 Non Chatacterized Hit- tr|J3M7X9|J3M7X9_ORYBR
Uncharacterized protein OS=Oryza brachyantha GN=OB05G2,32.32,4e-18,no
description,NULL; PWWP DOMAIN-CONTAINING PROTEIN,NULL; PWWP,PWWP;
seg,NULL; Tudor/PWWP/MBT,NULL; ,CUFF.55355.1
         (891 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75361 similar to UniRef100_A2Q337 Cluster: PWWP; n=1;...   882   0.0  

>gnl|LJGI|TC75361 similar to UniRef100_A2Q337 Cluster: PWWP; n=1; Medicago
           truncatula|Rep: PWWP - Medicago truncatula (Barrel
           medic), partial (11%)
          Length = 854

 Score =  882 bits (445), Expect = 0.0
 Identities = 478/489 (97%)
 Strand = Plus / Plus

                                                                       
Query: 7   tttagggtttgttcagaactcgcaccaccatcatccaccgttgatcacggtgaaccgtcg 66
           |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 366 tttagggtttgttcagaactcgcaccaccatcatccaccgttgatcatagtgaaccgtcg 425

                                                                       
Query: 67  gagtctaatggttctgagagaaatggcgagctatcaatgggtttcgaagtgggtgacatg 126
           |||||||||||||||||||||||||||| | | |||| ||||||||||||||||||||||
Sbjct: 426 gagtctaatggttctgagagaaatggcggggtgtcaacgggtttcgaagtgggtgacatg 485

                                                                       
Query: 127 gtgtgggcgaaggtgaagtctcacccatggtggccagggcatatatacaacgaagctttt 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gtgtgggcgaaggtgaagtctcacccatggtggccagggcatatatacaacgaagctttt 545

                                                                       
Query: 187 gcatcagccgcggtgcgtcgatccaagagggaagggctcgtgttggtggctttcttcggt 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gcatcagccgcggtgcgtcgatccaagagggaagggctcgtgttggtggctttcttcggt 605

                                                                       
Query: 247 gacagcagctatgggtggtttgaatcagctgagcttatcccctttgatgcgaattttgct 306
           ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 606 gacagcagctatgggtggtttgaatcagctgagcttatcccctttgatgagaatttcgct 665

                                                                       
Query: 307 gagaaatcgaggcaggtgaattccagagcattcttgaaggctgtggaagaggcagtggaa 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gagaaatcgaggcaggtgaattccagagcattcttgaaggctgtggaagaggcagtggaa 725

                                                                       
Query: 367 gaagctagtaggaggagtgctcttggattggtttgtaggtgtaggaacgctaatattttc 426
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 gaagctagtaggaggagtgctcttggattggtttgtaggtgtaggaacgctaatattttc 785

                                                                       
Query: 427 caccccaccactgttcccgggtatttttctgttcatgtgcctgactctgagcctggaata 486
           ||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 786 caccccaccactgttcaagggtatttttctgttcatgtgcctgactatgagcctggaata 845

                    
Query: 487 tattctact 495
           |||||||||
Sbjct: 846 tattctact 854