Miyakogusa Predicted Gene

Lj5g3v1412680.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1412680.1 Non Characterized Hit- tr|D8RCQ7|D8RCQ7_SELML
Putative uncharacterized protein OS=Selaginella
moelle,56.58,2e-17,RING/U-box,NULL; RING FINGER PROTEIN,NULL;
zf-C3HC4,Zinc finger, C3HC4 RING-type; ZF_RING_2,Zinc fin,CUFF.55194.1
         (398 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g115240.1 | E3 ubiquitin protein ligase DRIP2, putative | ...   579   e-165
Medtr7g096210.2 | E3 ubiquitin protein ligase DRIP2, putative | ...   341   9e-94
Medtr7g096210.1 | E3 ubiquitin protein ligase DRIP2, putative | ...   340   1e-93
Medtr1g057690.1 | hypothetical protein | LC | chr1:25354425-2535...   106   4e-23
Medtr1g093150.1 | hypothetical protein | LC | chr1:33789663-3378...   103   4e-22
Medtr7g021270.1 | hypothetical protein | HC | chr7:6706427-67050...    61   2e-09

>Medtr7g115240.1 | E3 ubiquitin protein ligase DRIP2, putative | HC
           | chr7:47590926-47596695 | 20130731
          Length = 428

 Score =  579 bits (1492), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 282/393 (71%), Positives = 322/393 (81%)

Query: 5   VKVKSDKLRPCMTCPLCRKLFKDATTISLCLHTFCRKCIYEKLSDEESDCCPVCNIDLGC 64
           VKVK + L  CMTCPLC KL KDATTISLCLHTFCRKCI+EKLSDEE D CPVCNIDLG 
Sbjct: 3   VKVKRENLEACMTCPLCHKLLKDATTISLCLHTFCRKCIHEKLSDEEVDSCPVCNIDLGI 62

Query: 65  VPVEKLRADHNLQDIRTKLFPLKRRKTKAPEVLSPIPLPAKRKERSLSSLAVIAPKVSMQ 124
           +PVEKLR DHNLQDIRTK+FP KR+K KA EV+   PLP KRKERSLSSL V APKVS  
Sbjct: 63  LPVEKLRPDHNLQDIRTKIFPCKRQKVKAEEVVPSTPLPPKRKERSLSSLVVSAPKVSTH 122

Query: 125 TGFTGKRTKTSNRKAASLRGCSFILEDPVKKEETNNEDNKDSSKAGQFKKHKPNEDMENS 184
           T FTGKRTKT+ RKAA+LRGCSFI E+ +KKEET+NEDN DSS A   KK++PNED +N+
Sbjct: 123 TTFTGKRTKTATRKAAALRGCSFIPEETIKKEETHNEDNPDSSIAETSKKNRPNEDTDNN 182

Query: 185 VELAEGKVDLWTPLNCLVEAANRTKSFKANSQATPVAELECPTTSHGGLDQPETTTKTGL 244
           ++L EGK DLWTPLNCLVEAANRTKS ++N Q TP+ +LE PTT HGGL+  E TTK+  
Sbjct: 183 IDLTEGKADLWTPLNCLVEAANRTKSSRSNLQGTPLTKLESPTTPHGGLEMSEITTKSEP 242

Query: 245 PAFAQNELNIPKCKIKDTGHKKLFGVDKDAKCVPSGPAKRKRLRPAGQKRAAASDMSASA 304
           P   Q EL++PK K K  GHK  FG DK    +PSGP KRKR+RP+ QKRAAA +MSASA
Sbjct: 243 PTSVQGELHMPKTKNKSNGHKTKFGDDKGGNTMPSGPVKRKRMRPSKQKRAAAFEMSASA 302

Query: 305 PGMLSATWGKCNRKNSPIWFSLVASEDQKGDASLPQISSCYLRIRDGTVPVSFIQKYLVK 364
             ML AT  +CNRKN+PIWF+LVASEDQ G+ SLPQIS+CYLRI+DGTVPVS+IQKYL+K
Sbjct: 303 QLMLDATESRCNRKNNPIWFTLVASEDQNGEVSLPQISACYLRIKDGTVPVSYIQKYLMK 362

Query: 365 KLNLASETEVEIMCQGQPVLPSLQLHNVVDLWF 397
           KLNLASE EVEIMC+GQ VLP+LQLHN+VDLWF
Sbjct: 363 KLNLASEAEVEIMCRGQSVLPTLQLHNLVDLWF 395


>Medtr7g096210.2 | E3 ubiquitin protein ligase DRIP2, putative | HC
           | chr7:38583482-38588861 | 20130731
          Length = 428

 Score =  341 bits (874), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 202/411 (49%), Positives = 254/411 (61%), Gaps = 38/411 (9%)

Query: 4   TVKVKSDKLRPCMTCPLCRKLFKDATTISLCLHTFCRKCIYEKLSDEESDCCPVCNIDLG 63
            VKVK + +  CMTCPLC  LFK  TTIS CLHTFCRKCIY+K +DE+ +CCPVCNIDLG
Sbjct: 5   VVKVKRETIAACMTCPLCNNLFKQPTTISECLHTFCRKCIYDKFTDEDLECCPVCNIDLG 64

Query: 64  CVPVEKLRADHNLQDIRTKLFPLKRRKTKAPE---VLSPIPLPAKRKERSLSSLAVIAPK 120
           CVP+EKLR DH  QD+R K+FPLK RK KAPE   V +  PLPAKRKERSLSSL V  P+
Sbjct: 65  CVPLEKLRPDHTKQDVRAKIFPLKGRKVKAPEPEAVAASEPLPAKRKERSLSSLVVNTPR 124

Query: 121 VSMQTGFTGKRTKTSNRKAASLRGCSFILEDPVKKEETNNED-----------NKDSSKA 169
           VS+QT  TG+RTK + RKA+SLR  SF ++  +KKE    +D           NK     
Sbjct: 125 VSVQTTMTGRRTKPT-RKASSLRSSSFSIDKSIKKEAELLDDCPESSSSPEASNKLRQNN 183

Query: 170 GQFK--KHKPNEDMENSVELAEGKVDLWTPLNCLVEAANRTKSFKANS-QATPVAELECP 226
           GQ +  +  PN   EN  +  + K+DLW PLNCLVE A+RTKS K+N+ Q +        
Sbjct: 184 GQSEGSQSAPNRVTENDSKTCDAKMDLWKPLNCLVEVASRTKSLKSNNIQGSDAKPEPAQ 243

Query: 227 TTSHGGLDQPETTTKTGLPAFAQNELNIPKCKIKDTGHKKLFGVDKDAKCVPSGPAKRKR 286
               G   Q     +    A  ++E   P            F V  D        AK  +
Sbjct: 244 ANESGSQVQKIKNKEKKRKAKVEDESISP------------FPVSSDT-------AKPNK 284

Query: 287 LRPAGQKRAAASDMSASAPGMLSATWGKCNRKNSPIWFSLVASEDQKGDASLPQISSCYL 346
           LR   +K+    +   S   ++ +T  K   K  PIWFSLVASE+Q+GD  LPQI + Y+
Sbjct: 285 LRRVRRKKEPFGESGISPQAVVDSTGSKL-FKGGPIWFSLVASENQEGDTPLPQIPASYV 343

Query: 347 RIRDGTVPVSFIQKYLVKKLNLASETEVEIMCQGQPVLPSLQLHNVVDLWF 397
           RI+DG+VPVSFIQKYL+KKL+L +ETE+EI+C GQPVLP+L LHN+V+LW 
Sbjct: 344 RIKDGSVPVSFIQKYLMKKLDLTNETEIEIICMGQPVLPTLTLHNLVELWL 394


>Medtr7g096210.1 | E3 ubiquitin protein ligase DRIP2, putative | HC
           | chr7:38583482-38588867 | 20130731
          Length = 429

 Score =  340 bits (873), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 199/412 (48%), Positives = 256/412 (62%), Gaps = 39/412 (9%)

Query: 4   TVKVKSDKLRPCMTCPLCRKLFKDATTISLCLHTFCRKCIYEKLSDEESDCCPVCNIDLG 63
            VKVK + +  CMTCPLC  LFK  TTIS CLHTFCRKCIY+K +DE+ +CCPVCNIDLG
Sbjct: 5   VVKVKRETIAACMTCPLCNNLFKQPTTISECLHTFCRKCIYDKFTDEDLECCPVCNIDLG 64

Query: 64  CVPVEKLRADHNLQDIRTKLFPLKRRKTKAPE---VLSPIPLPAKRKERSLSSLAVIAPK 120
           CVP+EKLR DH  QD+R K+FPLK RK KAPE   V +  PLPAKRKERSLSSL V  P+
Sbjct: 65  CVPLEKLRPDHTKQDVRAKIFPLKGRKVKAPEPEAVAASEPLPAKRKERSLSSLVVNTPR 124

Query: 121 VSMQTGFTGKRTKTSNRKAASLRGCSFILEDPVKKE--------------ETNNEDNKDS 166
           VS+QT  TG+RTK + RKA+SLR  SF ++  +KKE              E +N+  +++
Sbjct: 125 VSVQTTMTGRRTKPT-RKASSLRSSSFSIDKSIKKEAELLDDCPESSSSPEASNKLRQNN 183

Query: 167 SKAGQFKKHKPNEDMENSVELAEGKVDLWTPLNCLVEAANRTKSFKANS-QATPVAELEC 225
            +  +  +  PN   EN  +  + K+DLW PLNCLVE A+RTKS K+N+ Q +       
Sbjct: 184 GQQSEGSQSAPNRVTENDSKTCDAKMDLWKPLNCLVEVASRTKSLKSNNIQGSDAKPEPA 243

Query: 226 PTTSHGGLDQPETTTKTGLPAFAQNELNIPKCKIKDTGHKKLFGVDKDAKCVPSGPAKRK 285
                G   Q     +    A  ++E   P            F V  D        AK  
Sbjct: 244 QANESGSQVQKIKNKEKKRKAKVEDESISP------------FPVSSDT-------AKPN 284

Query: 286 RLRPAGQKRAAASDMSASAPGMLSATWGKCNRKNSPIWFSLVASEDQKGDASLPQISSCY 345
           +LR   +K+    +   S   ++ +T  K   K  PIWFSLVASE+Q+GD  LPQI + Y
Sbjct: 285 KLRRVRRKKEPFGESGISPQAVVDSTGSKL-FKGGPIWFSLVASENQEGDTPLPQIPASY 343

Query: 346 LRIRDGTVPVSFIQKYLVKKLNLASETEVEIMCQGQPVLPSLQLHNVVDLWF 397
           +RI+DG+VPVSFIQKYL+KKL+L +ETE+EI+C GQPVLP+L LHN+V+LW 
Sbjct: 344 VRIKDGSVPVSFIQKYLMKKLDLTNETEIEIICMGQPVLPTLTLHNLVELWL 395


>Medtr1g057690.1 | hypothetical protein | LC |
          chr1:25354425-25355604 | 20130731
          Length = 154

 Score =  106 bits (264), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 45/81 (55%), Positives = 60/81 (74%)

Query: 8  KSDKLRPCMTCPLCRKLFKDATTISLCLHTFCRKCIYEKLSDEESDCCPVCNIDLGCVPV 67
          +S ++  C++C LC++L  DAT I +C HTFC+KCIY KLSDE  DCCPVC++ LG  P 
Sbjct: 10 RSREIAKCLSCELCKQLLTDATKIIICFHTFCKKCIYTKLSDEILDCCPVCDVHLGIDPF 69

Query: 68 EKLRADHNLQDIRTKLFPLKR 88
           KLR+D NLQD R +LFP+ +
Sbjct: 70 SKLRSDFNLQDTRNRLFPIGK 90


>Medtr1g093150.1 | hypothetical protein | LC |
           chr1:33789663-33787293 | 20130731
          Length = 411

 Score =  103 bits (256), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 47/78 (60%), Positives = 66/78 (84%), Gaps = 1/78 (1%)

Query: 320 SPIWFSLVASEDQKGDASLPQISSCYLRIRDGTVPVSFIQKYLVKKLNLASETEVEIMCQ 379
           +PIWFSLVAS++Q   A LPQISS Y+ +R+G++PVS I+K+LV+KL+LASE EVEI+ +
Sbjct: 304 NPIWFSLVASKEQDVGA-LPQISSPYIMVRNGSLPVSHIKKHLVQKLDLASEAEVEILLR 362

Query: 380 GQPVLPSLQLHNVVDLWF 397
           G+PVL S+QL N+V++W 
Sbjct: 363 GKPVLCSMQLQNLVEMWL 380


>Medtr7g021270.1 | hypothetical protein | HC | chr7:6706427-6705001
           | 20130731
          Length = 366

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/58 (53%), Positives = 39/58 (67%)

Query: 317 RKNSPIWFSLVASEDQKGDASLPQISSCYLRIRDGTVPVSFIQKYLVKKLNLASETEV 374
           R +S IWF L AS++Q  +  LPQI   YLRI+DG + V  + KYLV KL L SE+EV
Sbjct: 304 RPHSGIWFMLQASQNQLKEPFLPQIPKNYLRIKDGRMTVRLLFKYLVSKLKLESESEV 361