Miyakogusa Predicted Gene
- Lj5g3v1412680.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1412680.1 Non Chatacterized Hit- tr|D8RCQ7|D8RCQ7_SELML
Putative uncharacterized protein OS=Selaginella
moelle,56.58,2e-17,RING/U-box,NULL; RING FINGER PROTEIN,NULL;
zf-C3HC4,Zinc finger, C3HC4 RING-type; ZF_RING_2,Zinc fin,CUFF.55194.1
(1194 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62720 similar to UniRef100_A7QVP5 Cluster: Chromosome... 1465 0.0
gnl|LJGI|FS347780 similar to UniRef100_A7PUM6 Cluster: Chromosom... 811 0.0
gnl|LJGI|TC63288 weakly similar to UniRef100_A7QVP5 Cluster: Chr... 220 2e-56
gnl|LJGI|DC594315 similar to UniRef100_A7PUM6 Cluster: Chromosom... 94 2e-18
>gnl|LJGI|TC62720 similar to UniRef100_A7QVP5 Cluster: Chromosome chr14 scaffold_190,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_190, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 1018
Score = 1465 bits (739), Expect = 0.0
Identities = 742/743 (99%)
Strand = Plus / Plus
Query: 1 atggtggcgacagtgaaagtgaagagcgataagctacgaccatgcatgacatgccctctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 atggtggcgacagtgaaagtgaagagcgataagctacgaccatgcatgacatgccctctt 335
Query: 61 tgccgtaaactcttcaaggatgctaccaccatctctctctgccttcataccttttgcagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgccgtaaactcttcaaggatgctaccaccatctctctctgccttcataccttttgcagg 395
Query: 121 aaatgcatttatgagaagctctcagatgaggagtctgattgctgtccagtgtgcaatatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 aaatgcatttatgagaagctctcagatgaggagtctgattgctgtccagtgtgcaatatt 455
Query: 181 gatctaggatgtgttccagtggaaaaactcagggcagaccacaatttgcaagacataaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gatctaggatgtgttccagtggaaaaactcagggcagaccacaatttgcaagacataaga 515
Query: 241 acaaaattatttcctctcaagagaagaaagaccaaggccccagaagttttgtctccaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 acaaaattatttcctctcaagagaagaaagaccaaggccccagaagttttgtctccaata 575
Query: 301 cccttgcctgcaaaaaggaaagaaagatcactttcgtcattggcggttattgctcccaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 cccttgcctgcaaaaaggaaagaaagatcactttcgtcattggcggttattgctcccaaa 635
Query: 361 gtttcaatgcaaactggcttcacaggaaagcggacaaaaaccagtaacagaaaagctgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 gtttcaatgcaaactggcttcacaggaaagcggacaaaaaccagtaacagaaaagctgcc 695
Query: 421 tcattacgtggatgtagttttattcttgaagaccccgtaaagaaggaagaaacaaataat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 tcattacgtggatgtagttttattcttgaagaccccgtaaagaaggaagaaacaaataat 755
Query: 481 gaagataataaggattcttccaaggctgggcaatttaagaagcataagcccaatgaagac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 gaagataataaggattcttccaaggctgggcaatttaagaagcataagcccaatgaagac 815
Query: 541 atggagaacagtgtggaacttgcagaagggaaggttgatctctggacaccattgaactgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 atggagaacagtgtggaacttgcagaagggaaggttgatctctggacaccattgaactgt 875
Query: 601 cttgttgaagctgcaaacagaacgaagtccttcaaggccaattcacaagctacacctgtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 876 cttgttgaagctgcaaacagaacgaagtccttcaaggccaattcacaagctacgcctgtt 935
Query: 661 gccgaattagagtgtccaactacttctcatggaggactagatcaacctgaaactacaacc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 gccgaattagagtgtccaactacttctcatggaggactagatcaacctgaaactacaacc 995
Query: 721 aaaacaggcctacctgcttttgc 743
|||||||||||||||||||||||
Sbjct: 996 aaaacaggcctacctgcttttgc 1018
>gnl|LJGI|FS347780 similar to UniRef100_A7PUM6 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 635
Score = 811 bits (409), Expect = 0.0
Identities = 409/409 (100%)
Strand = Plus / Minus
Query: 786 cggacataaaaaattattcggcgttgacaaggatgcgaaatgtgtgccttcaggaccagc 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 cggacataaaaaattattcggcgttgacaaggatgcgaaatgtgtgccttcaggaccagc 576
Query: 846 aaagcgaaaaaggttgcgtcctgctggtcagaaaagagctgcagcatctgatatgtctgc 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 aaagcgaaaaaggttgcgtcctgctggtcagaaaagagctgcagcatctgatatgtctgc 516
Query: 906 ctcagccccaggcatgctaagtgcaacttggggaaagtgtaacagaaaaaacagtcctat 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ctcagccccaggcatgctaagtgcaacttggggaaagtgtaacagaaaaaacagtcctat 456
Query: 966 ttggttttcattagttgcttcagaggatcagaaaggagatgcctccttgccacagatctc 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ttggttttcattagttgcttcagaggatcagaaaggagatgcctccttgccacagatctc 396
Query: 1026 atcttgttacttaagaataagagatggtaccgtgcccgtctcatttatacaaaaatacct 1085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 atcttgttacttaagaataagagatggtaccgtgcccgtctcatttatacaaaaatacct 336
Query: 1086 tgtgaagaaactcaatcttgccagtgaaacagaggtggaaataatgtgccagggtcagcc 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtgaagaaactcaatcttgccagtgaaacagaggtggaaataatgtgccagggtcagcc 276
Query: 1146 agtgctcccttctctgcaactgcataacgtggtagatctctggttccgg 1194
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 agtgctcccttctctgcaactgcataacgtggtagatctctggttccgg 227
>gnl|LJGI|TC63288 weakly similar to UniRef100_A7QVP5 Cluster: Chromosome chr14
scaffold_190, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_190, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (63%)
Length = 1636
Score = 220 bits (111), Expect = 2e-56
Identities = 458/571 (80%), Gaps = 2/571 (0%)
Strand = Plus / Plus
Query: 41 catgcatgacatgccctctttgccgtaaactcttcaaggatgctaccaccatctctctct 100
||||||||| ||||||||||||| ||| | |||| || ||||||||||| |||||||
Sbjct: 239 catgcatgaaatgccctctttgctataagattttcagagaagctaccaccatttctctct 298
Query: 101 gccttcataccttttgcaggaaatgcatttatgagaagctctcagatgaggagtctgatt 160
||||||| |||||||||||||| ||||| |||||||| || |||||||||||| ||||
Sbjct: 299 gccttcacaccttttgcaggaagtgcatatatgagaaactttcagatgaggagatggatt 358
Query: 161 gctgtccagtgtgcaatattgatctaggatgtgttccagtggaaaaactcagggcagacc 220
|||||||||| |||||||||||||| || || | |||||||||| |||||| | ||||
Sbjct: 359 gctgtccagtatgcaatattgatctggggtgcatggcagtggaaaagctcaggcctgacc 418
Query: 221 acaatttgcaagacataagaacaaaattatttcctctcaagagaagaaagaccaaggcc- 279
||||||||||||| || || | |||||||| ||| | ||| || ||||| ||| ||
Sbjct: 419 acaatttgcaagatatgagggccaaattattcccttttaagcaaaaaaaga-taagacct 477
Query: 280 ccagaagttttgtctccaatacccttgcctgcaaaaaggaaagaaagatcactttcgtca 339
| ||||||| | || | || || || || |||||||| |||||||||||||| |||
Sbjct: 478 caagaagttgttccttctgtatccccaccagcgaaaaggaaggaaagatcactttcatca 537
Query: 340 ttggcggttattgctcccaaagtttcaatgcaaactggcttcacaggaaagcggacaaaa 399
||| ||||| ||||||||||||||| | | |||||||| ||||||||| | || |||
Sbjct: 538 ctggtggttagtgctcccaaagtttcgacaaacactggctttacaggaaagagaactaaa 597
Query: 400 accagtaacagaaaagctgcctcattacgtggatgtagttttattcttgaagaccccgta 459
||||||| ||||| ||||| | ||||||||||| | ||||| |||||||| || ||
Sbjct: 598 accagtacaagaaaggctgctactttacgtggatgcaattttaaccttgaagaatccata 657
Query: 460 aagaaggaagaaacaaataatgaagataataaggattcttccaaggctgggcaatttaag 519
|||| |||| || | || |||| ||||| || | |||||| |||| || | ||||
Sbjct: 658 aagactgaaggaaaacatggtgaacataatttggttccttccacagctgagccttctaag 717
Query: 520 aagcataagcccaatgaagacatggagaacagtgtggaacttgcagaagggaaggttgat 579
||||||| |||||||||||| | |||||||| |||| ||| |||||| ||||||||||
Sbjct: 718 aagcataggcccaatgaagatacaaagaacagtatggaccttacagaagagaaggttgat 777
Query: 580 ctctggacaccattgaactgtcttgttgaag 610
||||||||||| ||| |||||||| ||||||
Sbjct: 778 ctctggacacccttgcactgtcttcttgaag 808
Score = 129 bits (65), Expect = 4e-29
Identities = 143/169 (84%)
Strand = Plus / Plus
Query: 953 aaaacagtcctatttggttttcattagttgcttcagaggatcagaaaggagatgcctcct 1012
|||||||| |||||||||||||||||||||||||||| || ||||||||||| |||
Sbjct: 1118 aaaacagtgctatttggttttcattagttgcttcagaagaccagaaaggagaatttccct 1177
Query: 1013 tgccacagatctcatcttgttacttaagaataagagatggtaccgtgcccgtctcattta 1072
|||| ||||| ||| | ||||| |||||||||| ||||||| || |||||||||||||
Sbjct: 1178 tgcctcagatttcagcatgttatttaagaataaaggatggtaatgttcccgtctcattta 1237
Query: 1073 tacaaaaataccttgtgaagaaactcaatcttgccagtgaaacagaggt 1121
| || || || |||| ||||||||| ||||||||||| ||| |||||||
Sbjct: 1238 ttcataagtatcttgcgaagaaacttaatcttgccagcgaagcagaggt 1286
>gnl|LJGI|DC594315 similar to UniRef100_A7PUM6 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 589
Score = 93.7 bits (47), Expect = 2e-18
Identities = 110/131 (83%)
Strand = Plus / Plus
Query: 103 cttcataccttttgcaggaaatgcatttatgagaagctctcagatgaggagtctgattgc 162
||||| || ||||||||||| ||||||||||| || || ||||||||||| | || |||
Sbjct: 455 cttcacacgttttgcaggaagtgcatttatgataaactttcagatgaggaattggaatgc 514
Query: 163 tgtccagtgtgcaatattgatctaggatgtgttccagtggaaaaactcagggcagaccac 222
|||||| | ||||| |||||| | || ||||||||| | || ||||| ||| ||||||||
Sbjct: 515 tgtccaatttgcaacattgatttgggctgtgttccacttgagaaactgaggccagaccac 574
Query: 223 aatttgcaaga 233
|||||||||||
Sbjct: 575 aatttgcaaga 585