Miyakogusa Predicted Gene

Lj5g3v1260890.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1260890.1 tr|D7KID0|D7KID0_ARALL Ubiquitin
carboxyl-terminal hydrolase OS=Arabidopsis lyrata subsp. lyrata
GN=,40.82,6e-19, ,CUFF.55099.1
         (169 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g36020.1                                                       265   2e-71
Glyma10g31560.1                                                       249   1e-66

>Glyma20g36020.1 
          Length = 937

 Score =  265 bits (677), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 129/157 (82%), Positives = 143/157 (91%), Gaps = 2/157 (1%)

Query: 13  LDRMKGGERKLFGTPLVTYLVENPQYGADIEESVHKLLAPLRKAYSSTKSHDDDEKENGF 72
           LD MK G+RKLFGTPLVTYLVE+PQ+GA+IE SVHK+L PLRKAYSS+KSHD   KENGF
Sbjct: 612 LDNMKAGDRKLFGTPLVTYLVEDPQFGANIEASVHKMLEPLRKAYSSSKSHDG--KENGF 669

Query: 73  ISAGSDEQSNISNTQSEPRNPTIGSREQEGTSSGESSFQLVLTNERCLSCEPFDRASFIK 132
           ISAGSDEQSNISNTQSE ++ T G++EQEGTS GESSFQLVLTNE CLSCEP ++ASFIK
Sbjct: 670 ISAGSDEQSNISNTQSESQSLTTGNKEQEGTSCGESSFQLVLTNECCLSCEPIEKASFIK 729

Query: 133 PSQHIRVFLDWTDKEHELYDASYLRDLPEVHKTGFTV 169
           P+Q +RVFLDWTDKEHELYDASYLRDLPEVHKTGFTV
Sbjct: 730 PNQVVRVFLDWTDKEHELYDASYLRDLPEVHKTGFTV 766


>Glyma10g31560.1 
          Length = 926

 Score =  249 bits (635), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 122/157 (77%), Positives = 137/157 (87%), Gaps = 2/157 (1%)

Query: 13  LDRMKGGERKLFGTPLVTYLVENPQYGADIEESVHKLLAPLRKAYSSTKSHDDDEKENGF 72
           LD MKGG+RKLFGTPLVT LVE+PQ+GA+IE SVHK+LAPLRK YSS+KSHD   KENGF
Sbjct: 601 LDNMKGGDRKLFGTPLVTCLVEDPQFGANIEASVHKMLAPLRKTYSSSKSHDG--KENGF 658

Query: 73  ISAGSDEQSNISNTQSEPRNPTIGSREQEGTSSGESSFQLVLTNERCLSCEPFDRASFIK 132
           IS  SDEQSNISNT+SE  + T G++EQEGTS GESS QLVLTNE CLSCEP ++AS IK
Sbjct: 659 ISGDSDEQSNISNTESESLSLTTGNKEQEGTSCGESSLQLVLTNESCLSCEPIEKASLIK 718

Query: 133 PSQHIRVFLDWTDKEHELYDASYLRDLPEVHKTGFTV 169
           P+Q +RVFLDWTDKE ELYD+SYLRDLPEVHKTGFTV
Sbjct: 719 PNQVVRVFLDWTDKEQELYDSSYLRDLPEVHKTGFTV 755