Miyakogusa Predicted Gene

Lj5g3v1238820.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1238820.1 Non Chatacterized Hit- tr|J3M0H5|J3M0H5_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB04G2,37.25,5e-19,ALMT,Aluminum-activated malate transporter;
seg,NULL,CUFF.55091.1
         (176 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G00910.1 | Symbols:  | Aluminium activated malate transporter...    78   2e-15

>AT4G00910.1 | Symbols:  | Aluminium activated malate transporter
           family protein | chr4:389370-391287 REVERSE LENGTH=497
          Length = 497

 Score = 78.2 bits (191), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 12/168 (7%)

Query: 1   MRSCASCLDALFGCINSENXXXXXXXXXXXXXXXXVGANTASVVRELAITMRNMTRSNKL 60
           MR CA CL+ L  CIN E                 + + ++ ++RELA  M+N  +S+K+
Sbjct: 332 MRRCAYCLENLSICINYETEAPDQVKNHFGEACMKLSSASSKILRELADMMKNTRKSSKM 391

Query: 61  DILVEEMNGAAQDLRDFLK-------YPNMVNPTTSHSANGEEVSANIKIPLMDIIQVVT 113
           D LV +MN A Q+L++ LK        P  V     +  + EE + ++   L +++ V T
Sbjct: 392 DFLVFDMNSAVQELQETLKNVPIETNKPEEVPSEEENKVDSEERTTSMS--LHEVLPVAT 449

Query: 114 VASLLIEIVARVEDIVKAVEELSDLAQFQLAECEKPKQVHSPNNKISP 161
           + SLLIE  AR++  V+AV+EL++LA F   E +  K+    N K  P
Sbjct: 450 LVSLLIENAARIQTAVEAVDELANLADF---EQDSKKKTGDNNTKQPP 494