Miyakogusa Predicted Gene
- Lj5g3v1176970.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1176970.1 tr|G7I4V2|G7I4V2_MEDTR COP1-interacting protein
OS=Medicago truncatula GN=MTR_1g075740 PE=4
SV=1,69.01,0,COP1-INTERACTING PROTEIN-RELATED,NULL; seg,NULL;
coiled-coil,NULL,NODE_13212_length_3985_cov_117.042908.path2.1
(3897 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82333 similar to UniRef100_A7NXD8 Cluster: Chromosome... 622 e-177
gnl|LJGI|BP063589 similar to UniRef100_A7NXD7 Cluster: Chromosom... 505 e-142
gnl|LJGI|BP037779 similar to UniRef100_A7NXD7 Cluster: Chromosom... 149 2e-34
>gnl|LJGI|TC82333 similar to UniRef100_A7NXD8 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (33%)
Length = 625
Score = 622 bits (314), Expect = e-177
Identities = 314/314 (100%)
Strand = Plus / Minus
Query: 3584 ctgaagcagttgagaagcctcaggtgaaggaatcaccgaaagggttcagacgactgttga 3643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctgaagcagttgagaagcctcaggtgaaggaatcaccgaaagggttcagacgactgttga 566
Query: 3644 agtttggaaaaaagagtcatggctcggctactgctggacacaacaccgagtcagataatg 3703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agtttggaaaaaagagtcatggctcggctactgctggacacaacaccgagtcagataatg 506
Query: 3704 ttagcatcgatggttctgaggcagatgagattggagttaatggttccagtaacgaagttc 3763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttagcatcgatggttctgaggcagatgagattggagttaatggttccagtaacgaagttc 446
Query: 3764 ataccttgaagaatttgatctctcaagatgaaattcctactgccagctcaactcaacaaa 3823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ataccttgaagaatttgatctctcaagatgaaattcctactgccagctcaactcaacaaa 386
Query: 3824 agtcttctcgctctttctccttgttatcgccatttcgaagcaagaatagtgagaaaaaga 3883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtcttctcgctctttctccttgttatcgccatttcgaagcaagaatagtgagaaaaaga 326
Query: 3884 ttatgatggcttga 3897
||||||||||||||
Sbjct: 325 ttatgatggcttga 312
>gnl|LJGI|BP063589 similar to UniRef100_A7NXD7 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 445
Score = 505 bits (255), Expect = e-142
Identities = 419/446 (93%), Gaps = 22/446 (4%)
Strand = Plus / Plus
Query: 99 acttgcctcaggcttgctcaacccatttctgtcccacttgaaggctgctcag-gatcaaa 157
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 1 acttgcctcaggcttgctcaacc-atttctgtcccacttgaaggctgctcagtgatcaaa 59
Query: 158 tggacaagg-gtggttattcaatt-gttcttg-agcctgag-ggtgtcaa-tgatgcctc 212
||||||||| |||||||||||||| ||||||| |||||||| |||||||| |||||||||
Sbjct: 60 tggacaaggtgtggttattcaatttgttcttgcagcctgagtggtgtcaactgatgcctc 119
Query: 213 -atggtttacaaa-aggaattgtt-gaaaggtttgttcg--ttttgtg-agcactcctg- 265
|||||||||||| |||||||||| ||||||||||||| ||||||| ||||||||||
Sbjct: 120 catggtttacaaacaggaattgtttgaaaggtttgttctgtttttgtgcagcactcctgc 179
Query: 266 ag-atattgg-aacgtgtgtatactttagaatc-ag-aaatcttacaaattgaag-aggc 320
|| ||||||| |||||||||||||||| || || |||||||||||||||||| ||||
Sbjct: 180 agcatattggcaacgtgtgtatactttcacctccagcaaatcttacaaattgaagcaggc 239
Query: 321 tattgcaattcaagg-aaacaattctttagggattagcactgtggaagaaaaccaagtaa 379
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tattgcaattcaaggcaaacaattctttagggattagcactgtggaagaaaaccaagtaa 299
Query: 380 agcatgtggaaagcactgaaggcagaaag-aatcaccaggatactaatgaggag-aaagc 437
||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 300 agcatgtggaaagcactgaaggcagaaagcaatcaccaggatactaatgaggagcaaagc 359
Query: 438 aattgtactttacaagcctgatgcacagccacttgaagcaaatggaagcaccacatcaga 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 aattgtactttacaagcctgatgcacagccacttgaagcaaatggaagcaccacatcaga 419
Query: 498 aggaaattcaaaagttcatcttctga 523
||||||||||||||||||||||||||
Sbjct: 420 aggaaattcaaaagttcatcttctga 445
>gnl|LJGI|BP037779 similar to UniRef100_A7NXD7 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (6%)
Length = 519
Score = 149 bits (75), Expect = 2e-34
Identities = 305/381 (80%), Gaps = 3/381 (0%)
Strand = Plus / Plus
Query: 2771 atactaaggcatcaatggcacggattagaagattgtcagaacccaaagtgagtacaactc 2830
|||| ||||||||||||||||| |||||||||||||||||||| ||| |||||| | ||
Sbjct: 14 atacaaaggcatcaatggcacgcattagaagattgtcagaacctaaaatgagtagcattc 73
Query: 2831 gtcagacttcctcagctaaaccgacaata---tcaaagattaaagcaactgatgtacctg 2887
| || |||||||||| |||| | || | |||| || ||||| | | |||| ||
Sbjct: 74 gacaaacttcctcagttaaagtaagaacaaattcaatgactaaagtagcggatgagactc 133
Query: 2888 agagaaaaaagatttctgctattgtgagtcatgataaaagcaagacagcagccctcccag 2947
|| |||||||||||||||||||||| |||||||||||||||||| ||| | || ||||
Sbjct: 134 ggaccaaaaagatttctgctattgtgaatcatgataaaagcaagactgcaactcttccag 193
Query: 2948 aactgaaaaccagaacacctaaagcaagtgacattgtccaaaacgtatcgtcagtcaaag 3007
||||||||| || || | ||||||||||| ||||| ||||| || ||| ||| | ||||
Sbjct: 194 aactgaaaatcaaaatatctaaagcaagtaacattttccaagacagatcatcaattaaag 253
Query: 3008 agaagattgagaagatggatgataacaaatcttctgtgaactcagaaggcactctgctca 3067
|||||| ||||| || ||| ||| || |||||| |||| |||||||| || ||| |
Sbjct: 254 agaagacacagaagctgaatggtaaaaagtcttctatgaattcagaaggtaccttgccga 313
Query: 3068 agacaaatgaaatgggattttcatccaataatgatggagatgacaatcctgtagttgaga 3127
| | |||||||| | ||||| || | |||||||||||||||||||| || ||||||
Sbjct: 314 aaaagaatgaaattttaatttcacacactgatgatggagatgacaatcctataattgaga 373
Query: 3128 agactgttgtgatgcttgagt 3148
||||||||||||| |||||||
Sbjct: 374 agactgttgtgatacttgagt 394