Miyakogusa Predicted Gene

Lj5g3v1097070.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1097070.1 Non Characterized Hit- tr|I1LYM0|I1LYM0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,85.24,0,DUF1681,Adaptin ear-binding coat-associated protein 1
NECAP-1; SUBFAMILY NOT NAMED,NULL; ATP-BINDING,gene.g61156.t1.1
         (271 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g069765.1 | adaptin ear-binding coat-associated protein 1 ...   414   e-116
Medtr2g091185.1 | adaptin ear-binding coat-associated protein 1 ...   128   4e-30

>Medtr1g069765.1 | adaptin ear-binding coat-associated protein 1 |
           HC | chr1:30432950-30430450 | 20130731
          Length = 279

 Score =  414 bits (1063), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 210/264 (79%), Positives = 223/264 (84%), Gaps = 10/264 (3%)

Query: 1   MSLEEEDESFEHTLLVVREVSVYKIPPRTTSG---------SDKIWTGRIRVVSRRDRCE 51
           MSLEEE+E F+HTLLVVREV+VYKIPPRTTSG         SDKIW+GR+RVVSRRDRCE
Sbjct: 1   MSLEEEEEGFDHTLLVVREVAVYKIPPRTTSGGYKCGEWLQSDKIWSGRLRVVSRRDRCE 60

Query: 52  IRLEDPASGDLFAACFVYPGQREGSVEPVLDSSRYFVLKIEDGQGKHAFIGLGFNERNEA 111
           IRLEDP SGDLFAACFV+PGQREGSVEPVLDSSRYFVLKIEDGQGKHAFIGLGF ERNEA
Sbjct: 61  IRLEDPNSGDLFAACFVFPGQREGSVEPVLDSSRYFVLKIEDGQGKHAFIGLGFAERNEA 120

Query: 112 FDFNVALSDHEKYVRREHDKESGNADAAEDSQIDIHPAVNHRLKEGETIRINVKHKTPGG 171
           FDFNVALSDHEKYVRREHDKESG+ADA+EDSQIDIHPAVNHRLKEGETIRINVKHK  GG
Sbjct: 121 FDFNVALSDHEKYVRREHDKESGDADASEDSQIDIHPAVNHRLKEGETIRINVKHKAAGG 180

Query: 172 TGMLSAAGLTGGHAATPKPKVLSLAXXXXXXXXXXXXXXXXXNDPVAARIVSTTHGSGPK 231
            GMLSAAGL+G H ATPKPKVL+LA                 NDPVAARI ST+  S  K
Sbjct: 181 AGMLSAAGLSGVHVATPKPKVLNLA-PPPGAGKIRSALPLPPNDPVAARIASTSPVSSVK 239

Query: 232 GTHEGVRHSTDALSDLSQLQKNLP 255
           GT EGV+ STD+LSDLSQLQKNLP
Sbjct: 240 GTKEGVKQSTDSLSDLSQLQKNLP 263


>Medtr2g091185.1 | adaptin ear-binding coat-associated protein 1 |
           HC | chr2:39329731-39325602 | 20130731
          Length = 287

 Score =  128 bits (322), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 104/180 (57%), Gaps = 19/180 (10%)

Query: 5   EEDESFEHTLLVVREVSVYKIPPRTTSGSDKI---------WTGRIRVVSRRDRCEIRLE 55
           E+ E  E  L  V E  VY IPPR ++ S +          W G ++VVS+ + C I+LE
Sbjct: 18  EDTEPIELVLFQVPECYVYIIPPRMSAASYRADEWDVNKWAWEGILKVVSKGEECIIKLE 77

Query: 56  DPASGDLFAACFVYPGQREGSVEPVLDSSRYFVLKIE---DGQGKHAFIGLGFNERNEAF 112
           D  +G+L+A  F+  G+    VE V+DSSRYFVL+IE   DG+ +HAFIG+GF ER EA+
Sbjct: 78  DKNTGELYARAFLRNGEPH-PVEAVIDSSRYFVLRIEENIDGRLRHAFIGIGFRERTEAY 136

Query: 113 DFNVALSDHEKYVRREHDKESGNADAAEDSQIDIHPAVNHRLKEGETIRINVKHKTPGGT 172
           DF  AL DH KY+ ++   E       + S +D      + LKEGET+ + +K+   GG 
Sbjct: 137 DFQAALHDHMKYLDKKKTAEEMEQHYQQSSSVD------YSLKEGETLVLQIKNNRSGGN 190