Miyakogusa Predicted Gene
- Lj5g3v1003390.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1003390.1 tr|G7IDL0|G7IDL0_MEDTR Centromere protein
OS=Medicago truncatula GN=MTR_1g071540 PE=4
SV=1,77.58,0,KIP1,KIP1-like; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; coiled-coil,NULL; seg,NULL,CUFF.54552.1
(3928 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP043204 homologue to UniRef100_A7NWS4 Cluster: Chromos... 141 4e-32
gnl|LJGI|TC76048 similar to UniRef100_A7PTZ5 Cluster: Chromosome... 54 7e-06
gnl|LJGI|TC71834 similar to UniRef100_A7PTZ5 Cluster: Chromosome... 54 7e-06
>gnl|LJGI|BP043204 homologue to UniRef100_A7NWS4 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 563
Score = 141 bits (71), Expect = 4e-32
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 1 atggatgtcaaggtgaagcaaatgattaagcttattgaagaagatgcagattcctttgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 atggatgtcaaggtgaagcaaatgattaagcttattgaagaagatgcagattcctttgcc 552
Query: 61 aggagagcaga 71
|||||||||||
Sbjct: 553 aggagagcaga 563
>gnl|LJGI|TC76048 similar to UniRef100_A7PTZ5 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 835
Score = 54.0 bits (27), Expect = 7e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 34 attgaagaagatgcagattcctttgcc 60
|||||||||||||||||||||||||||
Sbjct: 296 attgaagaagatgcagattcctttgcc 322
>gnl|LJGI|TC71834 similar to UniRef100_A7PTZ5 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 1106
Score = 54.0 bits (27), Expect = 7e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 34 attgaagaagatgcagattcctttgcc 60
|||||||||||||||||||||||||||
Sbjct: 204 attgaagaagatgcagattcctttgcc 230