Miyakogusa Predicted Gene
- Lj5g3v0657170.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0657170.1 Non Chatacterized Hit- tr|I1L8Z5|I1L8Z5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26782
PE,66.38,0,sigma70-ECF: RNA polymerase sigma factor, sigma-70,RNA
polymerase sigma-70; RNA POLYMERASE SIGMA
FAC,NODE_31328_length_2005_cov_71.025932.path2.1
(565 letters)
Database: trembl
41,451,118 sequences; 13,208,986,710 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
I1NAA3_SOYBN (tr|I1NAA3) Uncharacterized protein OS=Glycine max ... 713 0.0
I1JPP1_SOYBN (tr|I1JPP1) Uncharacterized protein OS=Glycine max ... 712 0.0
I1L8Z5_SOYBN (tr|I1L8Z5) Uncharacterized protein OS=Glycine max ... 708 0.0
I1LZ84_SOYBN (tr|I1LZ84) Uncharacterized protein OS=Glycine max ... 706 0.0
G7L3V2_MEDTR (tr|G7L3V2) RNA polymerase sigma factor rpoD OS=Med... 673 0.0
I3SER7_LOTJA (tr|I3SER7) Uncharacterized protein OS=Lotus japoni... 645 0.0
G7IA88_MEDTR (tr|G7IA88) RNA polymerase sigma factor OS=Medicago... 618 e-174
D7TQP0_VITVI (tr|D7TQP0) Putative uncharacterized protein OS=Vit... 586 e-165
B9S0J0_RICCO (tr|B9S0J0) RNA polymerase sigma factor rpoD, putat... 581 e-163
M5WAB7_PRUPE (tr|M5WAB7) Uncharacterized protein OS=Prunus persi... 580 e-163
B9MTE1_POPTR (tr|B9MTE1) Predicted protein OS=Populus trichocarp... 571 e-160
M1BY22_SOLTU (tr|M1BY22) Uncharacterized protein OS=Solanum tube... 499 e-138
E4MX68_THEHA (tr|E4MX68) mRNA, clone: RTFL01-17-E04 OS=Thellungi... 499 e-138
R0HNL5_9BRAS (tr|R0HNL5) Uncharacterized protein OS=Capsella rub... 496 e-138
D7LJA3_ARALL (tr|D7LJA3) RNA polymerase sigma-70 factor OS=Arabi... 495 e-137
K4CQJ3_SOLLC (tr|K4CQJ3) Uncharacterized protein OS=Solanum lyco... 493 e-137
M1BY20_SOLTU (tr|M1BY20) Uncharacterized protein OS=Solanum tube... 486 e-135
M4DL32_BRARP (tr|M4DL32) Uncharacterized protein OS=Brassica rap... 483 e-134
M1BY21_SOLTU (tr|M1BY21) Uncharacterized protein OS=Solanum tube... 443 e-122
M0RSY5_MUSAM (tr|M0RSY5) Uncharacterized protein OS=Musa acumina... 425 e-116
I1K2F4_SOYBN (tr|I1K2F4) Uncharacterized protein (Fragment) OS=G... 416 e-113
G7L2W1_MEDTR (tr|G7L2W1) RNA polymerase sigma factor rpoD OS=Med... 371 e-100
R0FW66_9BRAS (tr|R0FW66) Uncharacterized protein OS=Capsella rub... 362 2e-97
K4A7Y8_SETIT (tr|K4A7Y8) Uncharacterized protein OS=Setaria ital... 343 1e-91
I1GKK0_BRADI (tr|I1GKK0) Uncharacterized protein OS=Brachypodium... 338 3e-90
J3MRH6_ORYBR (tr|J3MRH6) Uncharacterized protein OS=Oryza brachy... 337 1e-89
M0WB53_HORVD (tr|M0WB53) Uncharacterized protein OS=Hordeum vulg... 333 8e-89
M0WB57_HORVD (tr|M0WB57) Uncharacterized protein OS=Hordeum vulg... 333 9e-89
M0WB51_HORVD (tr|M0WB51) Uncharacterized protein OS=Hordeum vulg... 333 1e-88
M0WB48_HORVD (tr|M0WB48) Uncharacterized protein OS=Hordeum vulg... 332 2e-88
I1QGT9_ORYGL (tr|I1QGT9) Uncharacterized protein OS=Oryza glaber... 332 3e-88
Q84LK8_ORYSJ (tr|Q84LK8) Os08g0242800 protein OS=Oryza sativa su... 332 3e-88
B4FJ30_MAIZE (tr|B4FJ30) SIGMA70-like transcription factor OS=Ze... 330 9e-88
M1BY23_SOLTU (tr|M1BY23) Uncharacterized protein OS=Solanum tube... 329 2e-87
M8A8U2_TRIUA (tr|M8A8U2) RNA polymerase sigma factor rpoD OS=Tri... 327 1e-86
Q9ZPL0_MAIZE (tr|Q9ZPL0) Sigma factor SIG6 OS=Zea mays GN=sig6 P... 323 1e-85
B8BC85_ORYSI (tr|B8BC85) Putative uncharacterized protein OS=Ory... 322 4e-85
A3BR19_ORYSJ (tr|A3BR19) Putative uncharacterized protein OS=Ory... 321 5e-85
M8BZZ6_AEGTA (tr|M8BZZ6) RNA polymerase sigma factor rpoD OS=Aeg... 301 4e-79
Q9AYR7_9BRYO (tr|Q9AYR7) PpSIG2 OS=Physcomitrella patens GN=Sig2... 296 2e-77
E1C9M6_PHYPA (tr|E1C9M6) Plastid sigma facor SIG2 OS=Physcomitre... 296 2e-77
K0ISZ8_MARPO (tr|K0ISZ8) Plastid RNA polymerase sigma factor 2 O... 295 2e-77
A9RTR4_PHYPA (tr|A9RTR4) Uncharacterized protein OS=Physcomitrel... 277 8e-72
K8GQ72_9CYAN (tr|K8GQ72) RNA polymerase sigma factor OS=Oscillat... 260 9e-67
B7KDV7_CYAP7 (tr|B7KDV7) RNA polymerase sigma factor OS=Cyanothe... 259 2e-66
A9RTR6_PHYPA (tr|A9RTR6) Uncharacterized protein OS=Physcomitrel... 259 2e-66
B8LQB0_PICSI (tr|B8LQB0) Putative uncharacterized protein OS=Pic... 258 4e-66
F5UG89_9CYAN (tr|F5UG89) RNA polymerase sigma factor OS=Microcol... 258 4e-66
B8LLW6_PICSI (tr|B8LLW6) Putative uncharacterized protein OS=Pic... 258 5e-66
E0UHZ3_CYAP2 (tr|E0UHZ3) RNA polymerase sigma factor OS=Cyanothe... 258 5e-66
K9ZHC6_ANACC (tr|K9ZHC6) RNA polymerase sigma factor OS=Anabaena... 257 9e-66
G6FUP1_9CYAN (tr|G6FUP1) RNA polymerase sigma factor OS=Fischere... 257 1e-65
A0ZJC3_NODSP (tr|A0ZJC3) RNA polymerase sigma factor OS=Nodulari... 257 1e-65
K9VRX0_9CYAN (tr|K9VRX0) RNA polymerase sigma factor OS=Oscillat... 257 1e-65
C7QR23_CYAP0 (tr|C7QR23) RNA polymerase sigma factor OS=Cyanothe... 256 2e-65
B7K1V2_CYAP8 (tr|B7K1V2) RNA polymerase sigma factor OS=Cyanothe... 256 2e-65
F4XPJ0_9CYAN (tr|F4XPJ0) RNA polymerase sigma factor OS=Moorea p... 256 2e-65
K9S7N4_9CYAN (tr|K9S7N4) RNA polymerase sigma factor OS=Geitleri... 256 2e-65
K9WH45_9CYAN (tr|K9WH45) RNA polymerase sigma factor OS=Microcol... 255 3e-65
Q9L4T2_NOSP7 (tr|Q9L4T2) RNA polymerase sigma factor OS=Nostoc p... 255 4e-65
K9T849_9CYAN (tr|K9T849) RNA polymerase sigma factor OS=Pleuroca... 255 4e-65
K9Q8G4_9NOSO (tr|K9Q8G4) RNA polymerase sigma factor OS=Nostoc s... 255 4e-65
K9TM07_9CYAN (tr|K9TM07) RNA polymerase sigma factor OS=Oscillat... 255 4e-65
K9XHA2_9CHRO (tr|K9XHA2) RNA polymerase sigma factor OS=Gloeocap... 254 4e-65
K9YFR5_HALP7 (tr|K9YFR5) RNA polymerase sigma factor OS=Halothec... 254 4e-65
K9PJQ4_9CYAN (tr|K9PJQ4) RNA polymerase sigma factor OS=Calothri... 254 5e-65
D7E0K7_NOSA0 (tr|D7E0K7) RNA polymerase sigma factor OS=Nostoc a... 254 5e-65
B4W0Y8_9CYAN (tr|B4W0Y8) RNA polymerase sigma factor OS=Coleofas... 254 5e-65
B4WPM0_9SYNE (tr|B4WPM0) RNA polymerase sigma factor OS=Synechoc... 254 6e-65
K9QTZ2_NOSS7 (tr|K9QTZ2) RNA polymerase sigma factor OS=Nostoc s... 254 9e-65
Q3MDA3_ANAVT (tr|Q3MDA3) RNA polymerase sigma factor OS=Anabaena... 253 1e-64
Q7U5C4_SYNPX (tr|Q7U5C4) RNA polymerase sigma factor OS=Synechoc... 253 1e-64
M1WSP5_9NOST (tr|M1WSP5) RNA polymerase sigma factor OS=Richelia... 253 2e-64
B9SDA3_RICCO (tr|B9SDA3) RNA polymerase sigma factor rpoD1, puta... 253 2e-64
D7UB90_VITVI (tr|D7UB90) Putative uncharacterized protein OS=Vit... 253 2e-64
Q05YJ7_9SYNE (tr|Q05YJ7) RNA polymerase sigma factor OS=Synechoc... 253 2e-64
K9XY46_STAC7 (tr|K9XY46) RNA polymerase sigma factor OS=Stanieri... 253 2e-64
R0IC61_9BRAS (tr|R0IC61) Uncharacterized protein OS=Capsella rub... 252 2e-64
Q3AWQ6_SYNS9 (tr|Q3AWQ6) RNA polymerase sigma factor OS=Synechoc... 252 3e-64
D8G4S3_9CYAN (tr|D8G4S3) RNA polymerase sigma factor OS=Oscillat... 252 3e-64
K9Q1H6_9CYAN (tr|K9Q1H6) RNA polymerase sigma factor OS=Leptolyn... 252 3e-64
D0CLH5_9SYNE (tr|D0CLH5) RNA polymerase sigma factor OS=Synechoc... 252 4e-64
K9R7S3_9CYAN (tr|K9R7S3) RNA polymerase sigma factor OS=Rivulari... 251 4e-64
K9TYL7_9CYAN (tr|K9TYL7) RNA polymerase sigma factor OS=Chroococ... 251 4e-64
Q3ALS7_SYNSC (tr|Q3ALS7) RNA polymerase sigma factor OS=Synechoc... 251 6e-64
K9X1I3_9NOST (tr|K9X1I3) RNA polymerase sigma factor OS=Cylindro... 251 8e-64
A9BEB7_PROM4 (tr|A9BEB7) RNA polymerase sigma factor OS=Prochlor... 250 9e-64
K9W354_9CYAN (tr|K9W354) RNA polymerase sigma factor OS=Crinaliu... 250 9e-64
D4TQC8_9NOST (tr|D4TQC8) RNA polymerase sigma factor OS=Raphidio... 250 9e-64
K9V2E9_9CYAN (tr|K9V2E9) RNA polymerase sigma factor OS=Calothri... 250 1e-63
A4CRY9_SYNPV (tr|A4CRY9) RNA polymerase sigma factor OS=Synechoc... 250 1e-63
D7KIT0_ARALL (tr|D7KIT0) Putative uncharacterized protein OS=Ara... 249 1e-63
G4FIM1_9SYNE (tr|G4FIM1) RNA polymerase sigma factor OS=Synechoc... 249 2e-63
K9YRT3_DACSA (tr|K9YRT3) RNA polymerase sigma factor OS=Dactyloc... 249 2e-63
Q10UV2_TRIEI (tr|Q10UV2) RNA polymerase sigma factor OS=Trichode... 249 2e-63
A5GJC2_SYNPW (tr|A5GJC2) RNA polymerase sigma factor OS=Synechoc... 249 3e-63
D4TFK7_9NOST (tr|D4TFK7) RNA polymerase sigma factor OS=Cylindro... 248 3e-63
B9IPZ1_POPTR (tr|B9IPZ1) Predicted protein OS=Populus trichocarp... 248 4e-63
Q59965_SYNP2 (tr|Q59965) RNA polymerase sigma factor OS=Synechoc... 248 4e-63
A2C0V5_PROM1 (tr|A2C0V5) RNA polymerase sigma factor OS=Prochlor... 248 5e-63
Q46GS6_PROMT (tr|Q46GS6) RNA polymerase sigma factor OS=Prochlor... 248 6e-63
Q0I8I7_SYNS3 (tr|Q0I8I7) RNA polymerase sigma factor OS=Synechoc... 248 7e-63
K7KHD7_SOYBN (tr|K7KHD7) Uncharacterized protein OS=Glycine max ... 247 8e-63
L8L5U0_9SYNC (tr|L8L5U0) RNA polymerase sigma factor OS=Synechoc... 247 8e-63
B5ILG7_9CHRO (tr|B5ILG7) RNA polymerase sigma factor OS=Cyanobiu... 247 9e-63
Q7V698_PROMM (tr|Q7V698) RNA polymerase sigma factor OS=Prochlor... 247 9e-63
L8LB48_9CYAN (tr|L8LB48) RNA polymerase sigma factor OS=Leptolyn... 247 1e-62
Q7VD88_PROMA (tr|Q7VD88) RNA polymerase sigma factor OS=Prochlor... 246 2e-62
F2HHX7_9CRYP (tr|F2HHX7) RNA-polymerase sigma factor OS=Cryptomo... 246 2e-62
K7W4G2_9NOST (tr|K7W4G2) RNA polymerase sigma factor OS=Anabaena... 246 3e-62
M4DQ26_BRARP (tr|M4DQ26) Uncharacterized protein OS=Brassica rap... 245 3e-62
A5GSD3_SYNR3 (tr|A5GSD3) RNA polymerase sigma factor OS=Synechoc... 245 3e-62
B8HPM3_CYAP4 (tr|B8HPM3) RNA polymerase sigma factor OS=Cyanothe... 245 4e-62
L8M7W7_9CYAN (tr|L8M7W7) RNA polymerase sigma factor OS=Xenococc... 245 4e-62
A2C7M0_PROM3 (tr|A2C7M0) RNA polymerase sigma factor OS=Prochlor... 245 4e-62
B1X5Q2_PAUCH (tr|B1X5Q2) RNA polymerase sigma factor OS=Paulinel... 245 5e-62
M0STE2_MUSAM (tr|M0STE2) Uncharacterized protein OS=Musa acumina... 244 6e-62
B0CDC4_ACAM1 (tr|B0CDC4) RNA polymerase sigma factor OS=Acaryoch... 244 6e-62
Q710C3_SPIOL (tr|Q710C3) Sigma factor OS=Spinacia oleracea GN=si... 244 6e-62
A9RG56_PHYPA (tr|A9RG56) Uncharacterized protein OS=Physcomitrel... 244 7e-62
K4AY41_SOLLC (tr|K4AY41) Uncharacterized protein OS=Solanum lyco... 244 8e-62
L8LPU5_9CHRO (tr|L8LPU5) RNA polymerase sigma factor OS=Gloeocap... 244 8e-62
A3Z5L5_9SYNE (tr|A3Z5L5) RNA polymerase sigma factor OS=Synechoc... 243 1e-61
Q5N3Q1_SYNP6 (tr|Q5N3Q1) RNA polymerase sigma factor OS=Synechoc... 243 1e-61
K9SJF8_9CYAN (tr|K9SJF8) RNA polymerase sigma factor OS=Pseudana... 243 2e-61
K1X4L7_SPIPL (tr|K1X4L7) RNA polymerase sigma factor OS=Arthrosp... 243 2e-61
H1WE70_9CYAN (tr|H1WE70) RNA polymerase sigma factor OS=Arthrosp... 243 2e-61
B5VWQ7_SPIMA (tr|B5VWQ7) RNA polymerase sigma factor OS=Arthrosp... 243 2e-61
A0YTZ3_LYNSP (tr|A0YTZ3) RNA polymerase sigma factor OS=Lyngbya ... 243 2e-61
K6DHZ3_SPIPL (tr|K6DHZ3) RNA polymerase sigma factor OS=Arthrosp... 243 2e-61
D5A0H0_SPIPL (tr|D5A0H0) RNA polymerase sigma factor OS=Arthrosp... 243 2e-61
Q9MTH3_SINAL (tr|Q9MTH3) Sigma factor 2 (Precursor) OS=Sinapis a... 243 2e-61
M4EPL2_BRARP (tr|M4EPL2) Uncharacterized protein OS=Brassica rap... 243 2e-61
K9UM88_9CHRO (tr|K9UM88) RNA polymerase sigma factor OS=Chamaesi... 242 2e-61
Q05RP2_9SYNE (tr|Q05RP2) RNA polymerase sigma factor OS=Synechoc... 242 2e-61
Q98RZ3_GUITH (tr|Q98RZ3) RNA-polymerase sigma factor OS=Guillard... 242 2e-61
A9BK56_HEMAN (tr|A9BK56) RpoD OS=Hemiselmis andersenii GN=HAN_1g... 242 3e-61
A2BVF8_PROM5 (tr|A2BVF8) RNA polymerase sigma factor OS=Prochlor... 242 3e-61
Q8S9D0_GUITH (tr|Q8S9D0) RNA polymerase sigma factor OS=Guillard... 242 3e-61
K9Z8E6_CYAAP (tr|K9Z8E6) RNA polymerase sigma factor OS=Cyanobac... 242 3e-61
Q31C37_PROM9 (tr|Q31C37) RNA polymerase sigma factor OS=Prochlor... 242 3e-61
B9P0P2_PROMR (tr|B9P0P2) RNA polymerase sigma factor OS=Prochlor... 241 4e-61
K9RSJ7_SYNP3 (tr|K9RSJ7) RNA polymerase sigma factor OS=Synechoc... 241 5e-61
M1D2M3_SOLTU (tr|M1D2M3) Uncharacterized protein OS=Solanum tube... 241 5e-61
K9YJV2_CYASC (tr|K9YJV2) RNA polymerase sigma factor OS=Cyanobac... 241 5e-61
A8G3L2_PROM2 (tr|A8G3L2) RNA polymerase sigma factor OS=Prochlor... 241 5e-61
Q7V2I0_PROMP (tr|Q7V2I0) RNA polymerase sigma factor OS=Prochlor... 241 6e-61
A3PBM1_PROM0 (tr|A3PBM1) RNA polymerase sigma factor OS=Prochlor... 241 7e-61
A2BPX8_PROMS (tr|A2BPX8) RNA polymerase sigma factor OS=Prochlor... 241 7e-61
R7QDV9_CHOCR (tr|R7QDV9) Stackhouse genomic scaffold, scaffold_2... 241 8e-61
J7G2H9_9CRYP (tr|J7G2H9) RNA-polymerase sigma factor OS=Chroomon... 241 8e-61
K9P2V4_CYAGP (tr|K9P2V4) RNA polymerase sigma factor OS=Cyanobiu... 240 1e-60
B9I6F1_POPTR (tr|B9I6F1) Predicted protein OS=Populus trichocarp... 240 1e-60
M5VUM6_PRUPE (tr|M5VUM6) Uncharacterized protein OS=Prunus persi... 239 2e-60
A4RYI5_OSTLU (tr|A4RYI5) Predicted protein OS=Ostreococcus lucim... 239 2e-60
M0TIC0_MUSAM (tr|M0TIC0) Uncharacterized protein OS=Musa acumina... 238 4e-60
K9SYS4_9SYNE (tr|K9SYS4) RNA polymerase sigma factor OS=Synechoc... 238 7e-60
Q8DL79_THEEB (tr|Q8DL79) RNA polymerase sigma factor OS=Thermosy... 238 7e-60
K9EXS2_9CYAN (tr|K9EXS2) RNA polymerase sigma factor OS=Leptolyn... 236 3e-59
A3YZH3_9SYNE (tr|A3YZH3) RNA polymerase sigma factor OS=Synechoc... 235 5e-59
C1MUC7_MICPC (tr|C1MUC7) Predicted protein OS=Micromonas pusilla... 234 6e-59
A3IZB7_9CHRO (tr|A3IZB7) RNA polymerase sigma factor OS=Cyanothe... 234 7e-59
Q017N3_OSTTA (tr|Q017N3) SigA (ISS) OS=Ostreococcus tauri GN=Ot0... 234 9e-59
M0TES6_MUSAM (tr|M0TES6) Uncharacterized protein OS=Musa acumina... 234 1e-58
G7J988_MEDTR (tr|G7J988) RNA polymerase sigma factor rpoD OS=Med... 232 3e-58
Q2JT33_SYNJA (tr|Q2JT33) RNA polymerase sigma factor OS=Synechoc... 232 4e-58
B1WQ73_CYAA5 (tr|B1WQ73) RNA polymerase sigma factor OS=Cyanothe... 232 4e-58
G6GV95_9CHRO (tr|G6GV95) RNA polymerase sigma factor OS=Cyanothe... 232 4e-58
Q4BYC5_CROWT (tr|Q4BYC5) RNA polymerase sigma factor OS=Crocosph... 231 4e-58
L8N2V5_9CYAN (tr|L8N2V5) RNA polymerase sigma factor OS=Pseudana... 231 5e-58
E0UE62_CYAP2 (tr|E0UE62) RNA polymerase sigma factor OS=Cyanothe... 231 8e-58
G5JAP6_CROWT (tr|G5JAP6) RNA polymerase sigma factor OS=Crocosph... 230 9e-58
Q7NHG5_GLOVI (tr|Q7NHG5) RNA polymerase sigma factor OS=Gloeobac... 230 1e-57
K9EWZ9_9CYAN (tr|K9EWZ9) RNA polymerase sigma factor OS=Leptolyn... 230 1e-57
L8NRV5_MICAE (tr|L8NRV5) RNA polymerase sigma factor OS=Microcys... 230 1e-57
A8YCV8_MICAE (tr|A8YCV8) RNA polymerase sigma factor OS=Microcys... 230 1e-57
C1E4E8_MICSR (tr|C1E4E8) Predicted protein OS=Micromonas sp. (st... 230 1e-57
I4G7M0_MICAE (tr|I4G7M0) RNA polymerase sigma factor OS=Microcys... 230 1e-57
I4H4V9_MICAE (tr|I4H4V9) RNA polymerase sigma factor OS=Microcys... 229 2e-57
L7E8N7_MICAE (tr|L7E8N7) RNA polymerase sigma factor OS=Microcys... 229 2e-57
I4HMJ3_MICAE (tr|I4HMJ3) RNA polymerase sigma factor OS=Microcys... 229 2e-57
I4GJA8_MICAE (tr|I4GJA8) RNA polymerase sigma factor OS=Microcys... 229 2e-57
I4FIV5_MICAE (tr|I4FIV5) RNA polymerase sigma factor OS=Microcys... 229 2e-57
I4GV22_MICAE (tr|I4GV22) RNA polymerase sigma factor OS=Microcys... 229 2e-57
I4FPN8_MICAE (tr|I4FPN8) RNA polymerase sigma factor OS=Microcys... 229 2e-57
I4I0R7_MICAE (tr|I4I0R7) RNA polymerase sigma factor OS=Microcys... 229 2e-57
I4GQP9_MICAE (tr|I4GQP9) RNA polymerase sigma factor OS=Microcys... 229 2e-57
B0JU57_MICAN (tr|B0JU57) RNA polymerase sigma factor OS=Microcys... 229 2e-57
I4IWN2_MICAE (tr|I4IWN2) RNA polymerase sigma factor OS=Microcys... 229 2e-57
I4FLI6_MICAE (tr|I4FLI6) RNA polymerase sigma factor OS=Microcys... 229 2e-57
I4H3L6_MICAE (tr|I4H3L6) RNA polymerase sigma factor OS=Microcys... 229 2e-57
A8YBI5_MICAE (tr|A8YBI5) RNA polymerase sigma factor OS=Microcys... 229 2e-57
I4IAI2_9CHRO (tr|I4IAI2) RNA polymerase sigma factor OS=Microcys... 229 2e-57
I4HZ12_MICAE (tr|I4HZ12) RNA polymerase sigma factor OS=Microcys... 229 2e-57
I4GN30_MICAE (tr|I4GN30) RNA polymerase sigma factor OS=Microcys... 229 2e-57
I4GB76_MICAE (tr|I4GB76) RNA polymerase sigma factor OS=Microcys... 229 2e-57
I4FFA4_MICAE (tr|I4FFA4) RNA polymerase sigma factor OS=Microcys... 229 2e-57
B1PVV9_MICAE (tr|B1PVV9) RNA polymerase sigma factor OS=Microcys... 229 2e-57
I4IUY9_MICAE (tr|I4IUY9) RNA polymerase sigma factor OS=Microcys... 229 3e-57
L8LL46_9CHRO (tr|L8LL46) RNA polymerase sigma factor OS=Gloeocap... 229 3e-57
B0JGK3_MICAN (tr|B0JGK3) RNA polymerase sigma factor OS=Microcys... 228 4e-57
I4HLE0_MICAE (tr|I4HLE0) RNA polymerase sigma factor OS=Microcys... 228 4e-57
I4IFY1_9CHRO (tr|I4IFY1) RNA polymerase sigma factor OS=Microcys... 228 5e-57
B7K8N4_CYAP7 (tr|B7K8N4) RNA polymerase sigma factor OS=Cyanothe... 227 8e-57
B8C130_THAPS (tr|B8C130) RNA polymerase (Fragment) OS=Thalassios... 227 1e-56
Q2JS52_SYNJA (tr|Q2JS52) RNA polymerase sigma factor OS=Synechoc... 226 2e-56
B2IZR4_NOSP7 (tr|B2IZR4) RNA polymerase sigma factor OS=Nostoc p... 226 2e-56
Q4C7J7_CROWT (tr|Q4C7J7) RNA polymerase sigma factor OS=Crocosph... 226 3e-56
G5JAB0_CROWT (tr|G5JAB0) RNA polymerase sigma factor OS=Crocosph... 226 3e-56
B1WS32_CYAA5 (tr|B1WS32) RNA polymerase sigma factor OS=Cyanothe... 226 3e-56
G6GVW3_9CHRO (tr|G6GVW3) RNA polymerase sigma factor OS=Cyanothe... 226 3e-56
L8AT57_9SYNC (tr|L8AT57) RNA polymerase sigma factor OS=Synechoc... 225 3e-56
F7ULM9_SYNYG (tr|F7ULM9) RNA polymerase sigma factor OS=Synechoc... 225 3e-56
M1MNH4_9SYNC (tr|M1MNH4) RNA polymerase sigma factor OS=Synechoc... 225 3e-56
H0PJ89_9SYNC (tr|H0PJ89) RNA polymerase sigma factor OS=Synechoc... 225 3e-56
H0PED4_9SYNC (tr|H0PED4) RNA polymerase sigma factor OS=Synechoc... 225 3e-56
H0P220_9SYNC (tr|H0P220) RNA polymerase sigma factor OS=Synechoc... 225 3e-56
A3ISY9_9CHRO (tr|A3ISY9) RNA polymerase sigma factor OS=Cyanothe... 225 3e-56
B8HQG4_CYAP4 (tr|B8HQG4) RNA polymerase sigma factor OS=Cyanothe... 225 4e-56
D3EMZ4_UCYNA (tr|D3EMZ4) RNA polymerase sigma factor OS=cyanobac... 225 5e-56
C7QM79_CYAP0 (tr|C7QM79) RNA polymerase sigma factor OS=Cyanothe... 224 5e-56
Q55525_SYNY3 (tr|Q55525) RNA polymerase sigma factor OS=Synechoc... 224 5e-56
F7URP3_SYNYG (tr|F7URP3) RNA polymerase sigma factor OS=Synechoc... 224 5e-56
M1MBB9_9SYNC (tr|M1MBB9) RNA polymerase sigma factor OS=Synechoc... 224 5e-56
H0PFH3_9SYNC (tr|H0PFH3) RNA polymerase sigma factor OS=Synechoc... 224 5e-56
H0PAJ0_9SYNC (tr|H0PAJ0) RNA polymerase sigma factor OS=Synechoc... 224 5e-56
H0NY38_9SYNC (tr|H0NY38) RNA polymerase sigma factor OS=Synechoc... 224 5e-56
Q2JIA4_SYNJB (tr|Q2JIA4) RNA polymerase sigma factor OS=Synechoc... 224 7e-56
D8FXC8_9CYAN (tr|D8FXC8) RNA polymerase sigma factor OS=Oscillat... 224 7e-56
K2A8X5_9BACT (tr|K2A8X5) RNA polymerase sigma factor OS=uncultur... 224 8e-56
K9T8P2_9CYAN (tr|K9T8P2) RNA polymerase sigma factor OS=Pleuroca... 223 1e-55
Q2JJL6_SYNJB (tr|Q2JJL6) RNA polymerase sigma factor OS=Synechoc... 223 2e-55
B7K407_CYAP8 (tr|B7K407) RNA polymerase sigma factor OS=Cyanothe... 223 2e-55
K9Z5T0_CYAAP (tr|K9Z5T0) RNA polymerase sigma factor OS=Cyanobac... 223 2e-55
K9SDK2_9CYAN (tr|K9SDK2) RNA polymerase sigma factor OS=Geitleri... 222 3e-55
B2J7M4_NOSP7 (tr|B2J7M4) RNA polymerase sigma factor OS=Nostoc p... 221 6e-55
B4WSK5_9SYNE (tr|B4WSK5) RNA polymerase sigma factor, cyanobacte... 221 8e-55
K9SH00_9CYAN (tr|K9SH00) RNA polymerase sigma factor OS=Pseudana... 220 1e-54
Q10XF4_TRIEI (tr|Q10XF4) RNA polymerase, sigma 28 subunit OS=Tri... 220 1e-54
H1WB17_9CYAN (tr|H1WB17) RNA polymerase sigma factor OS=Arthrosp... 219 2e-54
B2IZW2_NOSP7 (tr|B2IZW2) RNA polymerase sigma factor OS=Nostoc p... 219 2e-54
K9U8Z9_9CYAN (tr|K9U8Z9) RNA polymerase sigma factor OS=Chroococ... 219 2e-54
K9YNZ9_CYASC (tr|K9YNZ9) RNA polymerase sigma factor OS=Cyanobac... 219 2e-54
K9RCV1_9CYAN (tr|K9RCV1) RNA polymerase sigma factor OS=Rivulari... 219 3e-54
L8M4M2_9CYAN (tr|L8M4M2) RNA polymerase sigma factor OS=Xenococc... 219 3e-54
I4IAS0_9CHRO (tr|I4IAS0) RNA polymerase sigma factor rpoD3 OS=Mi... 219 3e-54
K8F5W9_9CHLO (tr|K8F5W9) RNA polymerase sigma factor RpoD OS=Bat... 219 3e-54
C7QVB1_CYAP0 (tr|C7QVB1) RNA polymerase, sigma 70 subunit, RpoD ... 218 4e-54
B7JX54_CYAP8 (tr|B7JX54) RNA polymerase, sigma 70 subunit, RpoD ... 218 4e-54
L8N838_9CYAN (tr|L8N838) RNA polymerase sigma factor OS=Pseudana... 218 4e-54
Q8DM59_THEEB (tr|Q8DM59) Group2 RNA polymerase sigma factor OS=T... 218 4e-54
K9SR03_9SYNE (tr|K9SR03) RNA polymerase sigma factor OS=Synechoc... 218 4e-54
K9XMI4_STAC7 (tr|K9XMI4) RNA polymerase sigma factor OS=Stanieri... 218 4e-54
K6DZP2_SPIPL (tr|K6DZP2) RNA polymerase sigma factor OS=Arthrosp... 218 5e-54
D5A2C0_SPIPL (tr|D5A2C0) RNA polymerase sigma factor OS=Arthrosp... 218 5e-54
B4W0H2_9CYAN (tr|B4W0H2) RNA polymerase sigma factor OS=Coleofas... 218 5e-54
K9TQ38_9CYAN (tr|K9TQ38) RNA polymerase sigma factor OS=Oscillat... 218 6e-54
D4TH69_9NOST (tr|D4TH69) RNA polymerase sigma factor OS=Cylindro... 218 7e-54
L8LWE0_9CYAN (tr|L8LWE0) RNA polymerase sigma factor, cyanobacte... 218 7e-54
K8GTQ7_9CYAN (tr|K8GTQ7) RNA polymerase sigma factor OS=Oscillat... 217 8e-54
B5W8F6_SPIMA (tr|B5W8F6) RNA polymerase sigma factor OS=Arthrosp... 217 9e-54
K9ZCE5_ANACC (tr|K9ZCE5) RNA polymerase sigma factor OS=Anabaena... 217 9e-54
D4TMC1_9NOST (tr|D4TMC1) RNA polymerase sigma factor OS=Raphidio... 217 1e-53
A0YXP5_LYNSP (tr|A0YXP5) RNA polymerase sigma factor OS=Lyngbya ... 217 1e-53
B1XQ38_SYNP2 (tr|B1XQ38) Sigma factor OS=Synechococcus sp. (stra... 216 1e-53
K9Q859_9NOSO (tr|K9Q859) RNA polymerase sigma factor OS=Nostoc s... 216 2e-53
B4WG00_9SYNE (tr|B4WG00) RNA polymerase sigma factor OS=Synechoc... 216 2e-53
I4HQ77_MICAE (tr|I4HQ77) RNA polymerase sigma factor rpoD3 OS=Mi... 216 2e-53
I4FRP5_MICAE (tr|I4FRP5) RNA polymerase sigma factor rpoD3 OS=Mi... 216 2e-53
E0UIU1_CYAP2 (tr|E0UIU1) RNA polymerase, sigma 70 subunit, RpoD ... 216 2e-53
K9V799_9CYAN (tr|K9V799) RNA polymerase sigma factor OS=Calothri... 216 2e-53
K9XV83_STAC7 (tr|K9XV83) RNA polymerase, sigma 70 subunit, RpoD ... 216 2e-53
K9WSJ0_9NOST (tr|K9WSJ0) RNA polymerase sigma factor OS=Cylindro... 216 2e-53
K9TEU2_9CYAN (tr|K9TEU2) RNA polymerase sigma factor, cyanobacte... 216 3e-53
K1VQH8_SPIPL (tr|K1VQH8) RNA polymerase sigma factor OS=Arthrosp... 216 3e-53
G6FPH6_9CYAN (tr|G6FPH6) RNA polymerase sigma factor OS=Fischere... 216 3e-53
F2CZB8_HORVD (tr|F2CZB8) Predicted protein OS=Hordeum vulgare va... 215 3e-53
L8L915_9CYAN (tr|L8L915) RNA polymerase sigma factor, cyanobacte... 215 3e-53
Q7NEW6_GLOVI (tr|Q7NEW6) RNA polymerase sigma factor OS=Gloeobac... 214 5e-53
A0ZFS4_NODSP (tr|A0ZFS4) RNA polymerase sigma factor OS=Nodulari... 214 5e-53
K9X9V9_9CHRO (tr|K9X9V9) RNA polymerase sigma factor OS=Gloeocap... 214 6e-53
L8KU07_9SYNC (tr|L8KU07) RNA polymerase sigma factor OS=Synechoc... 214 7e-53
K9QUH7_NOSS7 (tr|K9QUH7) RNA polymerase sigma factor OS=Nostoc s... 214 7e-53
K7WMI0_9NOST (tr|K7WMI0) RNA polymerase sigma factor OS=Anabaena... 214 8e-53
K9VQV7_9CYAN (tr|K9VQV7) RNA polymerase sigma factor OS=Oscillat... 214 9e-53
F5UG18_9CYAN (tr|F5UG18) RNA polymerase sigma factor OS=Microcol... 214 9e-53
F5UJ50_9CYAN (tr|F5UJ50) RNA polymerase, sigma 70 subunit, RpoD ... 214 9e-53
B1XNJ6_SYNP2 (tr|B1XNJ6) RNA polymerase sigma factor OS=Synechoc... 214 1e-52
P96033_SYNSP (tr|P96033) RNA polymerase sigma factor OS=Synechoc... 214 1e-52
D8G620_9CYAN (tr|D8G620) RNA polymerase sigma factor SigD OS=Osc... 214 1e-52
Q5MZI5_SYNP6 (tr|Q5MZI5) Group2 RNA polymerase sigma factor RpoD... 214 1e-52
D7E0T9_NOSA0 (tr|D7E0T9) RNA polymerase, sigma 70 subunit, RpoD ... 213 1e-52
K9VD31_9CYAN (tr|K9VD31) RNA polymerase, sigma 70 subunit, RpoD ... 213 1e-52
K9RTH4_SYNP3 (tr|K9RTH4) RNA polymerase sigma factor, cyanobacte... 213 1e-52
I4GS23_MICAE (tr|I4GS23) RNA polymerase sigma factor rpoD3 OS=Mi... 213 2e-52
K9S928_9CYAN (tr|K9S928) RNA polymerase sigma factor OS=Geitleri... 213 2e-52
K9EMY3_9CYAN (tr|K9EMY3) RNA polymerase sigma factor, cyanobacte... 213 2e-52
B7KAB6_CYAP7 (tr|B7KAB6) RNA polymerase, sigma 70 subunit, RpoD ... 213 2e-52
Q116K5_TRIEI (tr|Q116K5) RNA polymerase sigma factor OS=Trichode... 213 2e-52
D7E4D5_NOSA0 (tr|D7E4D5) RNA polymerase sigma factor OS=Nostoc a... 213 2e-52
K9PTA0_9CYAN (tr|K9PTA0) RNA polymerase sigma factor OS=Calothri... 213 2e-52
Q39515_CYACA (tr|Q39515) Chloroplast RNA polymerase sigma subuni... 213 2e-52
K9XK63_9CHRO (tr|K9XK63) RNA polymerase sigma factor OS=Gloeocap... 213 2e-52
I4H5M1_MICAE (tr|I4H5M1) RNA polymerase sigma factor rpoD3 OS=Mi... 212 3e-52
K9XM05_9CHRO (tr|K9XM05) RNA polymerase, sigma 70 subunit, RpoD ... 212 3e-52
B0C249_ACAM1 (tr|B0C249) RNA polymerase sigma factor OS=Acaryoch... 212 3e-52
Q3MBX2_ANAVT (tr|Q3MBX2) Sigma 28 (Flagella/Sporulation) OS=Anab... 212 3e-52
Q3MBV9_ANAVT (tr|Q3MBV9) RNA polymerase sigma factor OS=Anabaena... 212 3e-52
B8HU39_CYAP4 (tr|B8HU39) RNA polymerase sigma factor OS=Cyanothe... 212 3e-52
Q9KHE5_NOSS1 (tr|Q9KHE5) RNA polymerase sigma factor OS=Nostoc s... 212 3e-52
K9QHM1_9NOSO (tr|K9QHM1) RNA polymerase, sigma 70 subunit, RpoD ... 212 3e-52
Q8S9C8_CYAPA (tr|Q8S9C8) RNA polymerase sigma factor OS=Cyanopho... 212 3e-52
I4ISK0_MICAE (tr|I4ISK0) RNA polymerase sigma factor rpoD3 OS=Mi... 212 3e-52
K9Y6K9_HALP7 (tr|K9Y6K9) RNA polymerase sigma factor OS=Halothec... 212 3e-52
I4G0I4_MICAE (tr|I4G0I4) RNA polymerase sigma factor rpoD3 OS=Mi... 212 3e-52
K9TZY6_9CYAN (tr|K9TZY6) RNA polymerase sigma factor OS=Chroococ... 212 3e-52
A0ZN70_NODSP (tr|A0ZN70) RNA polymerase sigma factor OS=Nodulari... 212 3e-52
K8GCA2_9CYAN (tr|K8GCA2) RNA polymerase sigma factor, cyanobacte... 212 3e-52
B2J979_NOSP7 (tr|B2J979) RNA polymerase, sigma 70 subunit, RpoD ... 212 4e-52
B0JTP4_MICAN (tr|B0JTP4) Group 2 RNA polymerase sigma factor OS=... 212 4e-52
L8NM63_MICAE (tr|L8NM63) RNA polymerase sigma factor rpoD2 OS=Mi... 212 4e-52
A8YAB5_MICAE (tr|A8YAB5) Genome sequencing data, contig C249 OS=... 212 4e-52
K9X3C6_9NOST (tr|K9X3C6) RNA polymerase sigma factor, cyanobacte... 212 4e-52
F4Y0Z1_9CYAN (tr|F4Y0Z1) Putative RNA polymerase sigma factor OS... 211 4e-52
R7QJX2_CHOCR (tr|R7QJX2) Stackhouse genomic scaffold, scaffold_3... 211 5e-52
L7E3E5_MICAE (tr|L7E3E5) RNA polymerase sigma factor OS=Microcys... 211 5e-52
I4GLZ5_MICAE (tr|I4GLZ5) RNA polymerase sigma factor rpoD3 OS=Mi... 211 5e-52
I4FIK9_MICAE (tr|I4FIK9) RNA polymerase sigma factor rpoD3 OS=Mi... 211 5e-52
D4CMB1_9FIRM (tr|D4CMB1) RNA polymerase sigma factor OS=Oribacte... 211 5e-52
R8W2M7_9CLOT (tr|R8W2M7) RNA polymerase sigma factor RpoD OS=But... 211 5e-52
F5UJI7_9CYAN (tr|F5UJI7) RNA polymerase sigma factor OS=Microcol... 211 5e-52
K9QYS3_NOSS7 (tr|K9QYS3) RNA polymerase sigma factor, cyanobacte... 211 6e-52
P96034_SYNSP (tr|P96034) Sigma factor OS=Synechococcus sp. GN=si... 211 7e-52
D4TFM7_9NOST (tr|D4TFM7) SigD (Sigma 28 (Flagella/spoulation)) O... 211 7e-52
K9U2G0_9CYAN (tr|K9U2G0) RNA polymerase, sigma 70 subunit, RpoD ... 210 1e-51
G6FRT8_9CYAN (tr|G6FRT8) RNA polymerase, sigma 70 subunit, RpoD ... 210 1e-51
L8L7Y4_9CYAN (tr|L8L7Y4) RNA polymerase sigma factor OS=Leptolyn... 210 1e-51
K9ZFX7_ANACC (tr|K9ZFX7) RNA polymerase, sigma 70 subunit, RpoD ... 210 1e-51
K9RZ35_SYNP3 (tr|K9RZ35) RNA polymerase sigma factor OS=Synechoc... 210 1e-51
R6D821_9FIRM (tr|R6D821) RNA polymerase sigma factor OS=Firmicut... 210 1e-51
A5JEM2_9STRA (tr|A5JEM2) Chloroplast RNA-polymerase sigma factor... 210 1e-51
H1WGX8_9CYAN (tr|H1WGX8) Group 2 RNA polymerase sigma factor Sig... 210 2e-51
K9WNS7_9CYAN (tr|K9WNS7) RNA polymerase sigma factor, cyanobacte... 209 2e-51
I1ILU6_BRADI (tr|I1ILU6) Uncharacterized protein OS=Brachypodium... 209 2e-51
Q9KHE8_NOSS1 (tr|Q9KHE8) Group 2 sigma 70-type sigma factor D OS... 209 2e-51
K7WX98_9NOST (tr|K7WX98) RpoD family RNA polymerase sigma subuni... 209 2e-51
R5D398_9FIRM (tr|R5D398) RNA polymerase sigma factor OS=Firmicut... 209 2e-51
K9Z739_CYAAP (tr|K9Z739) RNA polymerase, sigma 70 subunit, RpoD ... 209 2e-51
Q5N3S3_SYNP6 (tr|Q5N3S3) Group2 RNA polymerase sigma factor RpoD... 209 2e-51
K9V798_9CYAN (tr|K9V798) RNA polymerase, sigma 70 subunit, RpoD ... 209 2e-51
F4XU70_9CYAN (tr|F4XU70) RNA polymerase sigma factor OS=Moorea p... 209 2e-51
A0YTG7_LYNSP (tr|A0YTG7) RNA polymerase sigma factor OS=Lyngbya ... 209 2e-51
I4I200_MICAE (tr|I4I200) RNA polymerase sigma factor rpoD3 OS=Mi... 209 3e-51
B8HR54_CYAP4 (tr|B8HR54) RNA polymerase, sigma 70 subunit, RpoD ... 208 4e-51
D1B614_THEAS (tr|D1B614) RNA polymerase sigma factor OS=Thermana... 208 4e-51
R6TIZ6_9STAP (tr|R6TIZ6) RNA polymerase sigma factor OS=Staphylo... 208 4e-51
K9W3C4_9CYAN (tr|K9W3C4) RNA polymerase sigma factor OS=Crinaliu... 208 5e-51
B1LBI9_THESQ (tr|B1LBI9) RNA polymerase sigma factor OS=Thermoto... 208 5e-51
A5IMD4_THEP1 (tr|A5IMD4) RNA polymerase sigma factor OS=Thermoto... 208 5e-51
K9QHC9_9NOSO (tr|K9QHC9) RNA polymerase sigma factor OS=Nostoc s... 208 5e-51
K9XPH8_STAC7 (tr|K9XPH8) RNA polymerase sigma factor OS=Stanieri... 208 5e-51
D2C3Z1_THENR (tr|D2C3Z1) RNA polymerase sigma factor OS=Thermoto... 208 5e-51
K8GMJ3_9CYAN (tr|K8GMJ3) RNA polymerase sigma factor OS=Oscillat... 208 5e-51
R5SI72_9GAMM (tr|R5SI72) RNA polymerase sigma factor OS=Acinetob... 208 5e-51
E3IYX9_FRASU (tr|E3IYX9) RNA polymerase sigma factor OS=Frankia ... 208 6e-51
M0XE63_HORVD (tr|M0XE63) Uncharacterized protein OS=Hordeum vulg... 208 6e-51
L8L758_9CYAN (tr|L8L758) RNA polymerase sigma factor OS=Leptolyn... 208 6e-51
J9H086_9THEM (tr|J9H086) RNA polymerase sigma factor OS=Thermoto... 208 6e-51
G4FFI6_THEMA (tr|G4FFI6) RNA polymerase sigma factor OS=Thermoto... 208 6e-51
K9VNL0_9CYAN (tr|K9VNL0) RNA polymerase sigma factor OS=Oscillat... 208 6e-51
K1VW29_SPIPL (tr|K1VW29) RNA polymerase sigma 70 subunit RpoD fa... 207 6e-51
B5VZJ5_SPIMA (tr|B5VZJ5) RNA polymerase, sigma 70 subunit, RpoD ... 207 6e-51
K9RA84_9CYAN (tr|K9RA84) RNA polymerase sigma factor OS=Rivulari... 207 6e-51
B4VTM7_9CYAN (tr|B4VTM7) RNA polymerase sigma factor, cyanobacte... 207 7e-51
K4A8A6_SETIT (tr|K4A8A6) Uncharacterized protein OS=Setaria ital... 207 7e-51
K9PYY3_9CYAN (tr|K9PYY3) RNA polymerase, sigma 70 subunit, RpoD ... 207 7e-51
B9K8D5_THENN (tr|B9K8D5) RNA polymerase sigma factor OS=Thermoto... 207 7e-51
M0XE64_HORVD (tr|M0XE64) Uncharacterized protein OS=Hordeum vulg... 207 8e-51
F9DNC2_9BACL (tr|F9DNC2) RNA polymerase sigma factor OS=Sporosar... 207 8e-51
A5V244_ROSS1 (tr|A5V244) RNA polymerase sigma factor OS=Roseifle... 207 9e-51
K9V3Z1_9CYAN (tr|K9V3Z1) RNA polymerase sigma factor OS=Calothri... 207 9e-51
K6E178_SPIPL (tr|K6E178) RNA polymerase sigma factor SigD OS=Art... 207 1e-50
K9PG81_9CYAN (tr|K9PG81) RNA polymerase, sigma 70 subunit, RpoD ... 207 1e-50
L8L7S5_9CYAN (tr|L8L7S5) RNA polymerase sigma factor OS=Leptolyn... 207 1e-50
K9X1J5_9NOST (tr|K9X1J5) RNA polymerase sigma factor OS=Cylindro... 207 1e-50
R5H7U6_9FIRM (tr|R5H7U6) RNA polymerase sigma factor OS=Firmicut... 207 1e-50
C2KW80_9FIRM (tr|C2KW80) RNA polymerase sigma factor OS=Oribacte... 206 1e-50
Q117X0_TRIEI (tr|Q117X0) RNA polymerase sigma factor OS=Trichode... 206 1e-50
B0C890_ACAM1 (tr|B0C890) RNA polymerase sigma-70 factor OS=Acary... 206 1e-50
R6PFH1_9CLOT (tr|R6PFH1) RNA polymerase sigma factor OS=Clostrid... 206 1e-50
M1V5C7_CYAME (tr|M1V5C7) Sigma subunit for chloroplast RNA polym... 206 2e-50
K9SD40_9CYAN (tr|K9SD40) RNA polymerase sigma factor OS=Geitleri... 206 2e-50
K9UHM5_9CHRO (tr|K9UHM5) RNA polymerase sigma factor, cyanobacte... 206 2e-50
M8AUB6_AEGTA (tr|M8AUB6) RNA polymerase sigma factor rpoD OS=Aeg... 206 2e-50
K9Q243_9CYAN (tr|K9Q243) RNA polymerase sigma factor OS=Leptolyn... 206 2e-50
R5SYW6_9CLOT (tr|R5SYW6) RNA polymerase sigma factor OS=Clostrid... 206 2e-50
K9ZHT8_ANACC (tr|K9ZHT8) RNA polymerase sigma factor OS=Anabaena... 206 2e-50
L8LVR4_9CHRO (tr|L8LVR4) RNA polymerase sigma factor, cyanobacte... 206 2e-50
Q9ZPL2_MAIZE (tr|Q9ZPL2) Sigma factor SIG2A OS=Zea mays GN=sig2A... 206 2e-50
K2EUZ1_9BACT (tr|K2EUZ1) RNA polymerase sigma factor OS=uncultur... 206 2e-50
B9XH89_9BACT (tr|B9XH89) RNA polymerase sigma factor OS=Pedospha... 206 2e-50
B1X0Q3_CYAA5 (tr|B1X0Q3) Group 2 sigma-70 RNA polymerase sigma f... 206 2e-50
G6GT77_9CHRO (tr|G6GT77) RNA polymerase, sigma 70 subunit, RpoD ... 206 2e-50
K7UQN4_MAIZE (tr|K7UQN4) Sigma factor SIG2A OS=Zea mays GN=ZEAMM... 206 2e-50
A8F8P3_THELT (tr|A8F8P3) RNA polymerase sigma factor OS=Thermoto... 206 2e-50
I0JXE6_9BACT (tr|I0JXE6) RNA polymerase sigma factor OS=Methylac... 206 3e-50
A7NGG2_ROSCS (tr|A7NGG2) RNA polymerase sigma factor OS=Roseifle... 206 3e-50
I1QZW7_ORYGL (tr|I1QZW7) Uncharacterized protein OS=Oryza glaber... 206 3e-50
R7E2W0_9BACT (tr|R7E2W0) RNA polymerase sigma factor OS=Akkerman... 205 3e-50
C5WQ19_SORBI (tr|C5WQ19) Putative uncharacterized protein Sb01g0... 205 3e-50
K9PLW5_9CYAN (tr|K9PLW5) RNA polymerase sigma factor OS=Calothri... 205 3e-50
B9KZ85_THERP (tr|B9KZ85) RNA polymerase sigma factor OS=Thermomi... 205 3e-50
K9YIA7_CYASC (tr|K9YIA7) RNA polymerase, sigma 70 subunit, RpoD ... 205 3e-50
R7GF20_9CLOT (tr|R7GF20) RNA polymerase sigma factor OS=Clostrid... 205 4e-50
G6FXB6_9CYAN (tr|G6FXB6) RNA polymerase sigma factor OS=Fischere... 205 4e-50
K9F2V1_9CYAN (tr|K9F2V1) RNA polymerase sigma factor OS=Leptolyn... 205 4e-50
Q53KH8_ORYSJ (tr|Q53KH8) Os11g0448400 protein OS=Oryza sativa su... 205 4e-50
Q7XXT0_ORYSJ (tr|Q7XXT0) Plastid sigma factor 2A OS=Oryza sativa... 205 4e-50
Q53JE7_ORYSJ (tr|Q53JE7) Sigma-70 region 3, putative OS=Oryza sa... 205 4e-50
D7E0F2_NOSA0 (tr|D7E0F2) RNA polymerase sigma factor OS=Nostoc a... 205 4e-50
K9R7J2_9CYAN (tr|K9R7J2) RNA polymerase sigma factor OS=Rivulari... 205 4e-50
M1WYW2_9NOST (tr|M1WYW2) RNA polymerase sigma factor OS=Richelia... 205 4e-50
F7YWL1_9THEM (tr|F7YWL1) RNA polymerase sigma factor OS=Thermoto... 205 4e-50
G6HQ03_9ACTO (tr|G6HQ03) RNA polymerase sigma factor OS=Frankia ... 205 4e-50
G9WTV1_9FIRM (tr|G9WTV1) RNA polymerase sigma factor OS=Oribacte... 205 5e-50
F5T4Z3_9FIRM (tr|F5T4Z3) RNA polymerase sigma factor OS=Oribacte... 205 5e-50
D4ZXY7_SPIPL (tr|D4ZXY7) Group 2 RNA polymerase sigma factor Sig... 205 5e-50
B1XKF5_SYNP2 (tr|B1XKF5) RNA polymerase sigma factor OS=Synechoc... 205 5e-50
J3N844_ORYBR (tr|J3N844) Uncharacterized protein OS=Oryza brachy... 205 5e-50
B8AUZ3_ORYSI (tr|B8AUZ3) Putative uncharacterized protein OS=Ory... 205 5e-50
R6JDR2_9BACT (tr|R6JDR2) RNA polymerase sigma factor OS=Akkerman... 204 5e-50
K6J7D0_LEPIR (tr|K6J7D0) RNA polymerase sigma factor OS=Leptospi... 204 6e-50
B2UM02_AKKM8 (tr|B2UM02) RNA polymerase sigma factor OS=Akkerman... 204 6e-50
M6CT15_9LEPT (tr|M6CT15) RNA polymerase sigma factor RpoD OS=Lep... 204 6e-50
A9B1B6_HERA2 (tr|A9B1B6) RNA polymerase sigma factor OS=Herpetos... 204 6e-50
N1WSN9_9LEPT (tr|N1WSN9) RNA polymerase sigma factor RpoD OS=Lep... 204 6e-50
D4TPM4_9NOST (tr|D4TPM4) SigD (Sigma 28 (Flagella/spoulation)) O... 204 6e-50
M6ZKT9_9LEPT (tr|M6ZKT9) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6Z033_9LEPT (tr|M6Z033) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6Y994_9LEPT (tr|M6Y994) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6XKD7_9LEPT (tr|M6XKD7) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6WWN1_9LEPT (tr|M6WWN1) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6V5P5_9LEPT (tr|M6V5P5) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6U5Y1_9LEPT (tr|M6U5Y1) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6SQ06_9LEPT (tr|M6SQ06) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6JUU0_9LEPT (tr|M6JUU0) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6JUS0_9LEPT (tr|M6JUS0) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6IMY5_9LEPT (tr|M6IMY5) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6G3Z1_9LEPT (tr|M6G3Z1) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6FF31_9LEPT (tr|M6FF31) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6EI47_9LEPT (tr|M6EI47) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6E8R7_9LEPT (tr|M6E8R7) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6DES8_9LEPT (tr|M6DES8) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6C1C5_9LEPT (tr|M6C1C5) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M5ZRC4_LEPIR (tr|M5ZRC4) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M5V708_LEPIR (tr|M5V708) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M3G6H4_9LEPT (tr|M3G6H4) RNA polymerase sigma factor OS=Leptospi... 204 7e-50
M3EH80_LEPIR (tr|M3EH80) RNA polymerase sigma factor OS=Leptospi... 204 7e-50
K8ML49_9LEPT (tr|K8ML49) RNA polymerase sigma factor OS=Leptospi... 204 7e-50
K8LI59_9LEPT (tr|K8LI59) RNA polymerase sigma factor OS=Leptospi... 204 7e-50
K8IHI3_9LEPT (tr|K8IHI3) RNA polymerase sigma factor OS=Leptospi... 204 7e-50
K8H6V8_9LEPT (tr|K8H6V8) RNA polymerase sigma factor OS=Leptospi... 204 7e-50
K6JEX4_9LEPT (tr|K6JEX4) RNA polymerase sigma factor OS=Leptospi... 204 7e-50
K6HHP2_9LEPT (tr|K6HHP2) RNA polymerase sigma factor OS=Leptospi... 204 7e-50
K6HBM9_9LEPT (tr|K6HBM9) RNA polymerase sigma factor OS=Leptospi... 204 7e-50
K6GDC7_9LEPT (tr|K6GDC7) RNA polymerase sigma factor OS=Leptospi... 204 7e-50
J5DV71_LEPIR (tr|J5DV71) RNA polymerase sigma factor OS=Leptospi... 204 7e-50
J4T0P9_9LEPT (tr|J4T0P9) RNA polymerase sigma factor OS=Leptospi... 204 7e-50
D4TGH9_9NOST (tr|D4TGH9) RNA polymerase sigma factor OS=Cylindro... 204 7e-50
K9QQ38_NOSS7 (tr|K9QQ38) RNA polymerase sigma factor OS=Nostoc s... 204 7e-50
M6QAJ4_9LEPT (tr|M6QAJ4) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6LEM2_9LEPT (tr|M6LEM2) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6FE78_9LEPT (tr|M6FE78) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M5ZZF6_9LEPT (tr|M5ZZF6) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M3ES55_9LEPT (tr|M3ES55) RNA polymerase sigma factor OS=Leptospi... 204 7e-50
K8KIH4_9LEPT (tr|K8KIH4) RNA polymerase sigma factor OS=Leptospi... 204 7e-50
D4TSS7_9NOST (tr|D4TSS7) RNA polymerase sigma factor OS=Raphidio... 204 7e-50
M6UKV4_9LEPT (tr|M6UKV4) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
K8KZW0_9LEPT (tr|K8KZW0) RNA polymerase sigma factor OS=Leptospi... 204 7e-50
M6VK00_LEPIR (tr|M6VK00) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
A0ZIW0_NODSP (tr|A0ZIW0) RNA polymerase sigma factor OS=Nodulari... 204 7e-50
K8XXK6_9LEPT (tr|K8XXK6) RNA polymerase sigma factor OS=Leptospi... 204 7e-50
J0LNN8_9FIRM (tr|J0LNN8) RNA polymerase sigma factor OS=Oribacte... 204 7e-50
G9WMC0_9FIRM (tr|G9WMC0) RNA polymerase sigma factor OS=Oribacte... 204 7e-50
G7QLF6_LEPII (tr|G7QLF6) RNA polymerase sigma factor OS=Leptospi... 204 7e-50
N6XKN4_LEPIR (tr|N6XKN4) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
N1VQ39_LEPIT (tr|N1VQ39) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
N1TNK3_LEPIR (tr|N1TNK3) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M7A3F1_LEPIR (tr|M7A3F1) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6YIS9_LEPIR (tr|M6YIS9) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6TWM3_LEPIR (tr|M6TWM3) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6SNB3_LEPIT (tr|M6SNB3) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6QTI5_LEPIR (tr|M6QTI5) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6QP00_LEPIR (tr|M6QP00) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6PUF5_LEPIR (tr|M6PUF5) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6PM28_LEPIR (tr|M6PM28) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6PEU2_LEPIR (tr|M6PEU2) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6NTU3_LEPIR (tr|M6NTU3) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6NJ65_LEPIR (tr|M6NJ65) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
M6MX54_LEPIR (tr|M6MX54) RNA polymerase sigma factor RpoD OS=Lep... 204 7e-50
>I1NAA3_SOYBN (tr|I1NAA3) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 554
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/547 (67%), Positives = 425/547 (77%), Gaps = 9/547 (1%)
Query: 20 VMMLHEQAVPAVSSWPSGIAAQHFPTSVLLQEQRDEYKPLLHI-NKEDKTPQATSSMRPM 78
V MLHEQA PAV+SW S AAQHFPTSVLLQEQRDEYKP LH+ NKE T + R M
Sbjct: 16 VTMLHEQAAPAVASWSSSSAAQHFPTSVLLQEQRDEYKPFLHVHNKE-----TTLNTRQM 70
Query: 79 DVALVQEKNNTGNADELVHNFMQQLHLRCHLQNLLSSSLTREIAASSTLQSITDDSERSP 138
D+ V EK NT NAD+LVH+F+QQLHLR HLQNLL+ S TR IAASS LQ + DSE
Sbjct: 71 DMTSVHEKGNTSNADQLVHDFVQQLHLRSHLQNLLTCSPTRGIAASSILQPVDIDSEWPA 130
Query: 139 DGLQWNXXXXXXXXXXXXXXXXXXXXXXKLIEADDDDNDDSLPFGLASTCFPDSSVRRNK 198
DG+ N KLIE DDDD LP GLAST DSS+++NK
Sbjct: 131 DGVPRNAVSLAQQALSASKQAVSTTGEMKLIEIDDDD---PLPSGLASTSLTDSSLKKNK 187
Query: 199 IVRSTRLXXXXXXXXXXXXXXVLDDESYLTRKSDVQGRLRVEKKLKEGLDQNDPLRMFLW 258
+VRSTR+ LD+ESYL RKSDVQ RLR+EKKLKEG D NDPLR+FL
Sbjct: 188 VVRSTRIIERLSKQRKSSKSKFLDEESYLERKSDVQRRLRLEKKLKEGYDPNDPLRLFLS 247
Query: 259 GPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQTQ 318
GPE+++LLT EEESQLI+Q+Q+L RLEEVKIRLQ+Q REPT+AEWAD VG SCYALQTQ
Sbjct: 248 GPESRQLLTREEESQLITQLQDLSRLEEVKIRLQTQLRREPTLAEWADAVGHSCYALQTQ 307
Query: 319 LRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFA 378
L RSKEKL HANLRMVVH+AK+Y GRGLS QDL QEGS GLMKS+EKFKP+AGCRF
Sbjct: 308 LHCANRSKEKLFHANLRMVVHIAKHYQGRGLSLQDLFQEGSTGLMKSIEKFKPEAGCRFG 367
Query: 379 SYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIG 438
+YAYWWIR +R+A+FLHSRTIRLPEN+YTLLGK+IEAKK Y +EGN+HPTKEELARK+G
Sbjct: 368 TYAYWWIRHAVRKAIFLHSRTIRLPENLYTLLGKVIEAKKSYIQEGNLHPTKEELARKVG 427
Query: 439 VTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHARNLL 498
+T++K++ LL A+R P+SMQQTVW DQDTT+QEITAD+AIE PDV V+KQLMR H NLL
Sbjct: 428 ITIEKMDNLLFASRNPISMQQTVWADQDTTFQEITADSAIEIPDVTVSKQLMRMHVHNLL 487
Query: 499 HTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGLD 558
+ L+P+ER IIRLRFGIEDG EK+LS+IG VFGL+KERVRQLESRAL KL+QCL S GLD
Sbjct: 488 NILSPKERGIIRLRFGIEDGEEKTLSDIGKVFGLTKERVRQLESRALLKLRQCLESQGLD 547
Query: 559 AYANLLV 565
AY +LLV
Sbjct: 548 AYTDLLV 554
>I1JPP1_SOYBN (tr|I1JPP1) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 554
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/547 (67%), Positives = 424/547 (77%), Gaps = 9/547 (1%)
Query: 20 VMMLHEQAVPAVSSWPSGIAAQHFPTSVLLQEQRDEYKPLLHI-NKEDKTPQATSSMRPM 78
V MLHEQA PAV+SW S AAQHFPTSVLLQEQRDEYKPLLH+ NKE T + R M
Sbjct: 16 VTMLHEQAAPAVASWSSSSAAQHFPTSVLLQEQRDEYKPLLHVHNKE-----TTLNTRQM 70
Query: 79 DVALVQEKNNTGNADELVHNFMQQLHLRCHLQNLLSSSLTREIAASSTLQSITDDSERSP 138
D+ V EK N N D+LVH+F+QQLHLR HLQNLL+ S TR IAASS LQ + DSE
Sbjct: 71 DMTSVHEKGNMSNGDQLVHDFVQQLHLRSHLQNLLTCSPTRGIAASSILQPVDIDSEWPA 130
Query: 139 DGLQWNXXXXXXXXXXXXXXXXXXXXXXKLIEADDDDNDDSLPFGLASTCFPDSSVRRNK 198
DGL N KLIE DDDD LPFGLAST +SS+++NK
Sbjct: 131 DGLPGNAISLAQQALSASKQAVSTTGEMKLIEIDDDD---PLPFGLASTSLANSSLKKNK 187
Query: 199 IVRSTRLXXXXXXXXXXXXXXVLDDESYLTRKSDVQGRLRVEKKLKEGLDQNDPLRMFLW 258
+VRSTR+ ++D+ESYL RKSDVQ RLR+EKKLKEG DQNDPLR+FL
Sbjct: 188 VVRSTRIIERRSKQRKSSKSKIIDEESYLERKSDVQRRLRLEKKLKEGYDQNDPLRLFLS 247
Query: 259 GPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQTQ 318
GPE+++LLT EEES LI+Q+Q+L R EEVKIRLQSQ REPT+AEWAD VGLSCY LQTQ
Sbjct: 248 GPESRQLLTREEESLLITQLQDLSRFEEVKIRLQSQLRREPTLAEWADAVGLSCYTLQTQ 307
Query: 319 LRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFA 378
L RSKEKL HANLRMVVH+AK+Y GRGLS QDL QEGS GLMKS++KFKP+AGCRF
Sbjct: 308 LHCANRSKEKLFHANLRMVVHIAKHYQGRGLSLQDLFQEGSTGLMKSIQKFKPEAGCRFG 367
Query: 379 SYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIG 438
+YAYWWIR IR+A+FLHSRTIRLPEN+YTLLGKLIEAKK Y +EGN+HPTKEELAR++G
Sbjct: 368 TYAYWWIRHAIRKAIFLHSRTIRLPENLYTLLGKLIEAKKSYIQEGNLHPTKEELARRVG 427
Query: 439 VTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHARNLL 498
+TV+KL+ LL A+R P+SMQQT+W DQDTT+QEITAD+AIE P V V+KQLMRRH NLL
Sbjct: 428 ITVEKLDNLLFASRNPISMQQTLWVDQDTTFQEITADSAIEIPGVTVSKQLMRRHVHNLL 487
Query: 499 HTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGLD 558
+ L+P+E+ IIRLRFGIEDG EK+LS+IG VFGL+KERVRQLE RAL KLKQCL S GLD
Sbjct: 488 NILSPKEKGIIRLRFGIEDGKEKTLSDIGKVFGLTKERVRQLECRALSKLKQCLESQGLD 547
Query: 559 AYANLLV 565
AY +LLV
Sbjct: 548 AYIDLLV 554
>I1L8Z5_SOYBN (tr|I1L8Z5) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 575
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/546 (64%), Positives = 416/546 (76%), Gaps = 4/546 (0%)
Query: 20 VMMLHEQAVPAVSSWPSGIAAQHFPTSVLLQEQRDEYKPLLHINKEDKTPQATSSMRPMD 79
V+MLHEQA P V+SW S +AQ+FP SVLL EQRDEY+PLLH++KEDKT QA S R MD
Sbjct: 34 VLMLHEQASPTVASWSSNFSAQNFPASVLLPEQRDEYRPLLHMSKEDKTSQAMLSTRQMD 93
Query: 80 VALVQEKNNTGNADELVHNFMQQLHLRCHLQNLLSSSLTREIAASSTLQSITDDSERSPD 139
V E+NNT NAD++V +F + LH +LQ LL+SS E+AASSTL+ ++ D ER P+
Sbjct: 94 TVTVHEENNTENADQVVLDFRKHLHHWPNLQYLLTSSQIGEVAASSTLEHVSVDLERRPN 153
Query: 140 GLQWNXXXXXXXXXXXXXXXXXXXXXXKLIEADDDDNDDSLPFGLASTCFPDSSVRRNKI 199
G+Q+N K I+ADDD S+PFGLAST D S+ RNK
Sbjct: 154 GVQFNGVSLAKKALSTSKQESSVVEDLKSIKADDD----SIPFGLASTSLADPSIGRNKT 209
Query: 200 VRSTRLXXXXXXXXXXXXXXVLDDESYLTRKSDVQGRLRVEKKLKEGLDQNDPLRMFLWG 259
VRSTRL V+DDE+YL RK D Q +LR EKK E LDQ+DPLR+FLWG
Sbjct: 210 VRSTRLLERRSKQRKVPKSKVIDDETYLARKDDAQEKLRAEKKKNEELDQDDPLRLFLWG 269
Query: 260 PETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQTQL 319
PETK+LLT E+ESQLISQIQ+L RLEEVK LQSQFGREPTMAEWA+G GL+C LQ+QL
Sbjct: 270 PETKQLLTLEQESQLISQIQDLLRLEEVKTNLQSQFGREPTMAEWAEGAGLNCRLLQSQL 329
Query: 320 RSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFAS 379
SG RS+EKLI ANLRMVVHVAK+Y GRGLS QDLLQEGSMGLMKSVEKF P AG RF +
Sbjct: 330 HSGNRSREKLIQANLRMVVHVAKSYQGRGLSLQDLLQEGSMGLMKSVEKFNPLAGSRFGN 389
Query: 380 YAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGV 439
YA+WWIRQ IR+A+F HSRTIRLPE V+ LLGK++EAKK Y +EGN+HPTKEELAR++GV
Sbjct: 390 YAFWWIRQAIRKAVFRHSRTIRLPEKVFILLGKVMEAKKLYIQEGNLHPTKEELARRVGV 449
Query: 440 TVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHARNLLH 499
TV+K++ LL +ARIP+SMQQTVW DQ+TT+QEITAD +E DV V KQLMRRH N+L
Sbjct: 450 TVEKIDKLLFSARIPISMQQTVWADQNTTFQEITADPTVEATDVTVEKQLMRRHVLNVLS 509
Query: 500 TLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGLDA 559
L+P+ERRIIRLR+G EDG +KSLSEIG +FGLSKERVRQLE RAL KLK+CL GLDA
Sbjct: 510 VLHPKERRIIRLRYGFEDGEQKSLSEIGDIFGLSKERVRQLEIRALYKLKKCLVKQGLDA 569
Query: 560 YANLLV 565
Y +LL+
Sbjct: 570 YVDLLL 575
>I1LZ84_SOYBN (tr|I1LZ84) Uncharacterized protein OS=Glycine max PE=4 SV=2
Length = 574
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/547 (64%), Positives = 416/547 (76%), Gaps = 4/547 (0%)
Query: 19 TVMMLHEQAVPAVSSWPSGIAAQHFPTSVLLQEQRDEYKPLLHINKEDKTPQATSSMRPM 78
+V+ML EQA P V+SW S +AQ+FP SVLLQEQRDEY+PLLH++KEDKT QA S R M
Sbjct: 32 SVLMLREQASPTVASWSSNFSAQNFPASVLLQEQRDEYRPLLHMSKEDKTSQAMLSTRQM 91
Query: 79 DVALVQEKNNTGNADELVHNFMQQLHLRCHLQNLLSSSLTREIAASSTLQSITDDSERSP 138
D +V E+NNT NAD++V +F + LH HLQNLL+SS T EI+ASSTLQ ++ D +R
Sbjct: 92 DTVMVHEENNTENADQVVLDFRKHLHYWPHLQNLLASSQTGEISASSTLQQVSSDLDRHT 151
Query: 139 DGLQWNXXXXXXXXXXXXXXXXXXXXXXKLIEADDDDNDDSLPFGLASTCFPDSSVRRNK 198
+G+Q N K I+ADDD S+PFGLAST D S+ RNK
Sbjct: 152 NGVQCNRVSLAKKALSTSKQGSSVVEDLKSIKADDD----SIPFGLASTGLADPSIGRNK 207
Query: 199 IVRSTRLXXXXXXXXXXXXXXVLDDESYLTRKSDVQGRLRVEKKLKEGLDQNDPLRMFLW 258
VRSTRL V+DDE+YL RK D +LRVEKK E LDQNDPL FL
Sbjct: 208 TVRSTRLLERRSKQRKVPKSKVIDDETYLARKDDAHEKLRVEKKKNEELDQNDPLCFFLR 267
Query: 259 GPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQTQ 318
GPETK+LLT E+ESQLISQIQ+L RLEEVK +LQSQFGREPTMAEWA+GVGL+C L Q
Sbjct: 268 GPETKQLLTLEQESQLISQIQDLLRLEEVKTKLQSQFGREPTMAEWAEGVGLNCRMLHAQ 327
Query: 319 LRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFA 378
LRSG+RS+EKLI ANLRMVVHVAK+Y GRGLS QDLLQEGSMGLMKSVEKF P G RF
Sbjct: 328 LRSGSRSREKLIQANLRMVVHVAKSYQGRGLSLQDLLQEGSMGLMKSVEKFNPLVGSRFG 387
Query: 379 SYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIG 438
+YA+WWIRQ IR+A+F HSRTIRLPE V+ LLGK++EAKK Y +EGN+HPTKEELAR++G
Sbjct: 388 NYAFWWIRQAIRKAVFRHSRTIRLPEKVFILLGKVMEAKKLYIQEGNLHPTKEELARRVG 447
Query: 439 VTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHARNLL 498
VTV+K++ LL +ARIP+SMQQTVW DQ+TT+QEITAD +E DV V KQLMR+H N+L
Sbjct: 448 VTVEKIDKLLFSARIPISMQQTVWADQNTTFQEITADPTVEATDVSVEKQLMRQHVLNVL 507
Query: 499 HTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGLD 558
L+P+ERRIIRLR+G EDG +KSLSEIG +FGLSKERVRQLE RAL KLK+CL GLD
Sbjct: 508 SILHPKERRIIRLRYGFEDGEQKSLSEIGDIFGLSKERVRQLEIRALYKLKKCLVKQGLD 567
Query: 559 AYANLLV 565
AY +LL+
Sbjct: 568 AYVDLLL 574
>G7L3V2_MEDTR (tr|G7L3V2) RNA polymerase sigma factor rpoD OS=Medicago truncatula
GN=MTR_7g101840 PE=4 SV=1
Length = 557
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/555 (62%), Positives = 415/555 (74%), Gaps = 22/555 (3%)
Query: 19 TVMML-HEQAVPAVSSWPSGIAAQHFPTSVLLQEQRDEYKPLLH-INKEDKTPQATSSMR 76
+VMM H+QA PA+SSWP+ FPTSVLLQE RDEYKPLLH N+++K PQAT + R
Sbjct: 17 SVMMPPHDQAAPALSSWPTT-----FPTSVLLQEHRDEYKPLLHTCNEDNKPPQATLNTR 71
Query: 77 PMDVALVQEKNNTGNADEL------VHNFMQQLHLRCHLQNLLSSSLTREIAASSTLQSI 130
D+ + EK TG+ D VHN M QLHLRCHLQNLL+SS E SS+ S
Sbjct: 72 VTDMTSICEKIITGDGDGDGHVDVSVHNCMHQLHLRCHLQNLLASS-PEEDFVSSSSSSS 130
Query: 131 TDDSERSPDGLQWNXXXXXXXXXXXXXXXXXXXXXXKLIEADDDDNDDSLPFGLASTCFP 190
+ + DG QW+ KL++ DDDD SLP GLA
Sbjct: 131 SSSTMLPADGFQWDALTLAKQALSASKQAAAVAQELKLVKIDDDD---SLPLGLA----- 182
Query: 191 DSSVRRNKIVRSTRLXXXXXXXXXXXXXXVLDDESYLTRKSDVQGRLRVEKKLKEGLDQN 250
DSS+ +NKIVRS RL VLDDE YLT+KS+VQ RLR+EKKLKEGLD N
Sbjct: 183 DSSLGKNKIVRSIRLKERRSKQRKVSNSKVLDDEMYLTKKSNVQRRLRLEKKLKEGLDGN 242
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
LR+FLW PETK+LL+ EEESQLI+QIQ+LF+L+E KI+LQS FGREPT+AEWADGVGL
Sbjct: 243 HALRLFLWSPETKQLLSIEEESQLIAQIQDLFKLKETKIKLQSHFGREPTLAEWADGVGL 302
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
SC LQ +L G RSK+KLIHANLR+VVH+AK Y GRGLS QDLLQEGSMGLM+SVEKFK
Sbjct: 303 SCRDLQKRLHCGNRSKDKLIHANLRLVVHIAKYYQGRGLSLQDLLQEGSMGLMRSVEKFK 362
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
PQAGCRF++YAYWWIRQTIRRALFLHS+TIRLPEN Y LLGK+ EAKK Y +EGN+HPTK
Sbjct: 363 PQAGCRFSTYAYWWIRQTIRRALFLHSKTIRLPENFYALLGKIAEAKKSYIKEGNLHPTK 422
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
EE+A+++G+TVD+LE+LL + R PLSM++ VW D DTT+QEITAD++IE P+V VAKQLM
Sbjct: 423 EEIAKRVGITVDRLEMLLFSTRTPLSMERAVWADSDTTFQEITADSSIEIPNVCVAKQLM 482
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R H RNLL L P+ER+++RLRFGIEDGYEKSL+EIG V G+ KERVRQLES+AL+KLKQ
Sbjct: 483 RSHVRNLLGILPPKERKVLRLRFGIEDGYEKSLTEIGKVLGVCKERVRQLESQALNKLKQ 542
Query: 551 CLASHGLDAYANLLV 565
CL S LDAY +L+V
Sbjct: 543 CLVSQQLDAYVDLIV 557
>I3SER7_LOTJA (tr|I3SER7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
Length = 311
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/311 (100%), Positives = 311/311 (100%)
Query: 255 MFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYA 314
MFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYA
Sbjct: 1 MFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYA 60
Query: 315 LQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAG 374
LQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAG
Sbjct: 61 LQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAG 120
Query: 375 CRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELA 434
CRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELA
Sbjct: 121 CRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELA 180
Query: 435 RKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHA 494
RKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHA
Sbjct: 181 RKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHA 240
Query: 495 RNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLAS 554
RNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLAS
Sbjct: 241 RNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLAS 300
Query: 555 HGLDAYANLLV 565
HGLDAYANLLV
Sbjct: 301 HGLDAYANLLV 311
>G7IA88_MEDTR (tr|G7IA88) RNA polymerase sigma factor OS=Medicago truncatula
GN=MTR_1g063850 PE=4 SV=1
Length = 567
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 315/553 (56%), Positives = 399/553 (72%), Gaps = 22/553 (3%)
Query: 19 TVMMLHEQAVPAVSSWPSGIAAQHFPTSVLLQEQRDEYKPLLHINKEDKTPQATSSMRPM 78
+V+ML EQ P V++W + ++Q+FPTSVLLQEQ DEY+PLLHI+K+DKT QAT + R M
Sbjct: 31 SVLMLREQVAPTVTAWCTSYSSQNFPTSVLLQEQCDEYRPLLHISKKDKTCQATLNTRQM 90
Query: 79 DVALVQEKNNTGNADELVHNFMQQLHLRCHLQNLLSSSLTREIAASSTLQSITDDSERSP 138
D+ VQEKN+T N D++ +F Q LHL L+NLL+SS T E+ SSTLQ
Sbjct: 91 DMVSVQEKNDTSNTDQVARDFRQHLHLLPRLENLLTSSQTGEMDGSSTLQH--------A 142
Query: 139 DGLQWNXXXXXXXXXXXXXXXXXXXXXXKLIEADDDDNDDSLPFGLAS-TCFPDSS---- 193
D LQ N I+AD+D D+S+PFGL +C SS
Sbjct: 143 DSLQCNAVSLSKQAASVAEDLIS-------IKADED-ADNSIPFGLVPPSCLASSSSAEP 194
Query: 194 -VRRNKIVRSTRLXXXXXXXXXXXXXXVLDDESYLTRKSDVQGRLRVEKKLKEGLDQNDP 252
+ NK VRSTRL V D E+YL K + +L+V+KK+ +G++Q+DP
Sbjct: 195 LLGGNKTVRSTRLRERRAKERKVPKLKVKDKETYLDGKDAAEEKLQVQKKISKGMNQSDP 254
Query: 253 LRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSC 312
L FL PE+K+LLT E+ESQL+ QIQ L RLE++K LQSQFGREPTMAEWA+G GL+C
Sbjct: 255 LNKFLQSPESKQLLTSEQESQLVVQIQELLRLEDLKTSLQSQFGREPTMAEWAEGAGLNC 314
Query: 313 YALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQ 372
++ QLR G RS+EKLI ANLR+V ++AK+Y GRGLS +DLLQEGS GL+KS++KFK Q
Sbjct: 315 RKMKAQLRCGNRSREKLIQANLRLVHYIAKSYQGRGLSIEDLLQEGSTGLIKSIKKFKTQ 374
Query: 373 AGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEE 432
AGCRFASYAYWWI+Q IR+A++ HSRTIRLPE VY L K++EAKK Y EGN++PTKEE
Sbjct: 375 AGCRFASYAYWWIKQAIRKAIYNHSRTIRLPEKVYNKLSKVLEAKKLYKEEGNLNPTKEE 434
Query: 433 LARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRR 492
LAR++G++ DK++ LL ARIP+SMQ TV ++ DTT+QEITAD AIE+P++ VAKQLMRR
Sbjct: 435 LARRVGISPDKVDRLLFVARIPISMQNTVGSETDTTFQEITADCAIESPNMSVAKQLMRR 494
Query: 493 HARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCL 552
H N+L+ L P+ERRIIRLRFG EDG EKSLSEIG +FGLS+ERVRQLESRAL KLK+ L
Sbjct: 495 HVLNVLNILRPKERRIIRLRFGFEDGEEKSLSEIGEIFGLSRERVRQLESRALYKLKKYL 554
Query: 553 ASHGLDAYANLLV 565
GLDAYA+LL+
Sbjct: 555 VGQGLDAYADLLI 567
>D7TQP0_VITVI (tr|D7TQP0) Putative uncharacterized protein OS=Vitis vinifera
GN=VIT_08s0040g01560 PE=4 SV=1
Length = 561
Score = 586 bits (1510), Expect = e-165, Method: Compositional matrix adjust.
Identities = 306/549 (55%), Positives = 386/549 (70%), Gaps = 15/549 (2%)
Query: 19 TVMMLHEQAVPAVSSWPSGIAAQHFPTSVLLQEQRDEYKPLLHINKEDKTPQATSSMRPM 78
+V+MLH+Q PAV+S P+ IA + FPTSVLLQEQRDEY+P K+++T QAT R M
Sbjct: 26 SVLMLHDQVAPAVASIPTTIA-RKFPTSVLLQEQRDEYRPFPQALKDERTFQATLEKRQM 84
Query: 79 DVALVQEKNNTGNADELVHNFMQQLHLRCHLQNLLSSSLTREIA--ASSTLQSITDDSER 136
++ + ++ N+ + ++ + NF +QL L+ L L SS T E + +SS ++SIT D E
Sbjct: 85 EIVVSADEENSDDHNQYMVNFERQLLLQPGLWYSLPSSQTGEKSPFSSSIMKSITTDIEN 144
Query: 137 SPDGLQWNXXXXXXXXXXXXXXXXXXXXXXKLIEADDDDNDDSLPFGLASTCFPDSSVRR 196
S D + KL+ AD +D+ ++S P
Sbjct: 145 SMDVKPCDVLALAKKALSASKQAVSLYENAKLLGADLEDSPSPSLGAISSPNLP----LE 200
Query: 197 NKIVRSTRLXXXXXXXXXXXXXXVLDDESYLTRKSDVQGRLRVEKKLKEGLDQNDPLRMF 256
K VRSTRL V E++ +R+++VQ +K+ EG D DPLR+F
Sbjct: 201 EKTVRSTRLLERRSKKRRNPKVAV--HENHGSRRAEVQ------RKINEGYDPKDPLRLF 252
Query: 257 LWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQ 316
LWGPET+KLLT +EES+LI QIQ L RLEEVK RLQS REPT+ EWA+ VGLSC LQ
Sbjct: 253 LWGPETRKLLTAKEESELIVQIQELMRLEEVKKRLQSHLKREPTVVEWAEAVGLSCQVLQ 312
Query: 317 TQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCR 376
+QL SG RS++KLI+ANLRMVVH+AK Y GRGL+ QDLLQEGSMGLM SVEKFKP AGCR
Sbjct: 313 SQLHSGNRSRQKLIYANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCR 372
Query: 377 FASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARK 436
FASYAYWWIRQ +R+A+F HSRTIRLPEN+Y+LLGK+ EAK+ + +EG+ PTKEE+A +
Sbjct: 373 FASYAYWWIRQAVRKAIFQHSRTIRLPENMYSLLGKVKEAKRLFIQEGHHDPTKEEIAER 432
Query: 437 IGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHARN 496
+G+T++KL+ LL R+PLSMQQ VW DQDTT+QE+TADT IE PDV VAKQLMR+H RN
Sbjct: 433 VGITIEKLQRLLLHTRMPLSMQQPVWADQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRN 492
Query: 497 LLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHG 556
LLH L P+ERRIIRLRFGI DG ++LSEIG VFG SKERVRQLE RAL KLKQCL+SHG
Sbjct: 493 LLHVLTPKERRIIRLRFGIGDGIPRTLSEIGLVFGFSKERVRQLEQRALHKLKQCLSSHG 552
Query: 557 LDAYANLLV 565
L++Y +LLV
Sbjct: 553 LESYTDLLV 561
>B9S0J0_RICCO (tr|B9S0J0) RNA polymerase sigma factor rpoD, putative OS=Ricinus
communis GN=RCOM_1355260 PE=4 SV=1
Length = 548
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 306/546 (56%), Positives = 378/546 (69%), Gaps = 32/546 (5%)
Query: 20 VMMLHEQAVPAVSSWPSGIAAQHFPTSVLLQEQRDEYKPLLHINKEDKTPQATSSMRPMD 79
V MLHEQAVPAV+S P+ A++FPTSVLLQEQRDE++PLL+I KEDKT QAT + MD
Sbjct: 35 VFMLHEQAVPAVTSAPTTSIARNFPTSVLLQEQRDEFRPLLNIFKEDKTFQATVDTKQMD 94
Query: 80 VALVQEKNNTGNADELVHNFMQQLHLRCHLQNLLSSSLTREIAASSTLQSITDDSERSPD 139
T + + + + + QL L +L + S T+QSIT +++
Sbjct: 95 PG-------TSDQEGICSDVLDQLILHSNL------------SWSLTMQSITTNTDEL-- 133
Query: 140 GLQWNXXXXXXXXXXXXXXXXXXXXXXKLIEADDDDNDDSLPFGLASTCFPDSSVRRNKI 199
L+ + DD++ GL T + S+ K
Sbjct: 134 -----MVVEPTNVIDLARKALSASKEAALLAQKCANLDDTVSTGLEPTDLSNFSLEEVKT 188
Query: 200 VRSTRLXXXXXXXXXXXXXXVLDDESYLTRKSDVQGRLRVEKKLKEGLDQNDPLRMFLWG 259
VRSTR + E Y +R++ VQ KK+ EG D DPLR+FLWG
Sbjct: 189 VRSTRRLERQSKNRRVTKTKEIFHEPYSSRRAGVQ------KKINEGFDPKDPLRLFLWG 242
Query: 260 PETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQTQL 319
PETK+LLT +EES+LI Q+Q+L LE VK + + QFGR+PT+ EWAD VGLS +Q+QL
Sbjct: 243 PETKQLLTAKEESELIGQVQDLMSLENVKEKFKLQFGRDPTLVEWADAVGLSYSVMQSQL 302
Query: 320 RSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFAS 379
SG RS+EKLI+ANLRMVVH+AK Y GRGLS QDLLQEGSMGLMKS+EKFKPQ GCRFA+
Sbjct: 303 HSGNRSREKLINANLRMVVHIAKQYQGRGLSLQDLLQEGSMGLMKSIEKFKPQVGCRFAT 362
Query: 380 YAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGV 439
YAYWWIRQT+R+A+F HSRTIRLPENVY LGK+ EAK+ Y EGN +PTKEELA++IG+
Sbjct: 363 YAYWWIRQTVRKAIFQHSRTIRLPENVYHTLGKVSEAKRSYIMEGNHNPTKEELAKRIGI 422
Query: 440 TVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHARNLLH 499
T +LE LL AR+PLSMQQTVW DQ+TT+QEITAD +E P++ VAKQLMR+H +LL+
Sbjct: 423 TTVRLERLLYMARMPLSMQQTVWADQETTFQEITADIEVEIPELCVAKQLMRKHVLSLLN 482
Query: 500 TLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGLDA 559
LNPRER+IIRLR+GIEDG +KSLSEIG+VFGLSKERVRQLESRAL KLKQCLASHGL+A
Sbjct: 483 ILNPRERKIIRLRYGIEDGKKKSLSEIGSVFGLSKERVRQLESRALYKLKQCLASHGLEA 542
Query: 560 YANLLV 565
YA+LLV
Sbjct: 543 YADLLV 548
>M5WAB7_PRUPE (tr|M5WAB7) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa003513mg PE=4 SV=1
Length = 568
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 312/551 (56%), Positives = 384/551 (69%), Gaps = 20/551 (3%)
Query: 20 VMMLHEQAVPAVSSWPSGIAAQHFPTSVLLQEQRDEYKPLLHINKEDKTPQAT-SSMRPM 78
V+MLHEQAVPAV+S P A+HFPTSVLLQEQRDE+KPLLH+ KEDKT +A M+
Sbjct: 33 VLMLHEQAVPAVTSVPITSVARHFPTSVLLQEQRDEFKPLLHVLKEDKTSEAALDRMQIE 92
Query: 79 DVALVQEKNNTGNADELVHNFMQQLHLRCHLQNLLSSSLTREIAASS-TLQSITDDSERS 137
A V E + + LV++ QL L + ++ SS T ++ TL+S+T S +
Sbjct: 93 TGASVHEDLDIDDFYPLVNSSKPQL-LNHDILDVFSSLQTGAKPSTPLTLESLTTASNKH 151
Query: 138 PDGLQWNXXXXXXXXXXXXXXXXXXXXXXKLIEADDDDNDDSLPFGLASTCFPDSSVRRN 197
D N + + AD DD L T + V
Sbjct: 152 MDVEPCNVVALAKKALSASREAASLAEDSQSMGADFDD--------LGYTSLANWIVEEE 203
Query: 198 KIVRSTRLXXXXXXXXXXX---XXXVLDDESYLTRKSDVQGRLRVEKKLKEGLDQNDPLR 254
K VRSTR+ V+ ES SDV+ KK+ EG + NDPLR
Sbjct: 204 KTVRSTRILERRRKRIKTRKVPKSKVIGHESNSFTGSDVR------KKISEGFNPNDPLR 257
Query: 255 MFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYA 314
+FLWGPET++LLT +EE++LI+++Q+LF+LEEVK RLQ+QFGREPT+ EWA+ VG+SC
Sbjct: 258 LFLWGPETRQLLTAKEEAELIARVQDLFKLEEVKSRLQTQFGREPTLIEWAEAVGISCQI 317
Query: 315 LQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAG 374
L++QLRSGT S+EKLI+ANLRMVVH+AK Y GRGL QDL+QEGSMGLMKSVEKFKPQAG
Sbjct: 318 LKSQLRSGTSSREKLIYANLRMVVHIAKQYQGRGLGLQDLMQEGSMGLMKSVEKFKPQAG 377
Query: 375 CRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELA 434
CRFA+YAYWWIRQT+R+A+F HSRTIRLPENVY+LLGK++EAKK +EGN +P KEELA
Sbjct: 378 CRFATYAYWWIRQTVRKAIFQHSRTIRLPENVYSLLGKVLEAKKSCIQEGNHNPNKEELA 437
Query: 435 RKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHA 494
R++G+TV+KLE LL A R+PLSMQQ VW DQDTT+QE+TADT +E PDV VAKQLMR+H
Sbjct: 438 RRVGITVEKLEKLLYATRMPLSMQQPVWADQDTTFQEVTADTGVEIPDVSVAKQLMRQHV 497
Query: 495 RNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLAS 554
R+LL LN RER IIRLR+GIEDG ++SLSEIG +FGLSKERVRQLESRA KL+Q L S
Sbjct: 498 RHLLSILNLREREIIRLRYGIEDGKQRSLSEIGGMFGLSKERVRQLESRAFLKLRQSLGS 557
Query: 555 HGLDAYANLLV 565
GL AY LLV
Sbjct: 558 QGLGAYGPLLV 568
>B9MTE1_POPTR (tr|B9MTE1) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_809851 PE=4 SV=1
Length = 535
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 307/547 (56%), Positives = 374/547 (68%), Gaps = 40/547 (7%)
Query: 19 TVMMLHEQAVPAVSSWPSGIAAQHFPTSVLLQEQRDEYKPLLHINKEDKTPQATSSMRPM 78
+V++L EQA PAVSS P+ AQHFPTSVLLQEQRDE++PL +I KED+ QAT R
Sbjct: 27 SVLILREQATPAVSSIPTTSTAQHFPTSVLLQEQRDEFRPLQNIFKEDRASQATLDRRKT 86
Query: 79 DVALV-QEKNNTGNADELVHNFMQQLHLRCHLQNLLSSSLTREIAASSTLQSITDDSERS 137
++ E ++ D+LV NF QLH NL + E L + +
Sbjct: 87 EIGTSGHEGKDSDELDQLVENFEYQLHHWPAYWNLTDKLIDVEPTNVINLAKRALSASKH 146
Query: 138 PDGLQWNXXXXXXXXXXXXXXXXXXXXXXKLIEADDDDNDDSLPFGLASTCFPDSSVRRN 197
L AD++ + D+L AST S+
Sbjct: 147 AAFL-----------------------------ADNNTDLDNL----ASTSSSSFSLEEV 173
Query: 198 KIVRSTRLXXXXXXXXXXXXXXVLDDESYLTRKSDVQGRLRVEKKLKEGLDQNDPLRMFL 257
KIVRS R L E+Y ++ +D+Q K+L +G D NDPLR+FL
Sbjct: 174 KIVRSRRHLARQSLNRRAPKTKDLIFETYDSKSADIQ------KRLSQGFDPNDPLRLFL 227
Query: 258 WGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQT 317
WGPETK+LLT +EE +LI+QIQ+L LE VK RL+SQFGREPT+ EWA VGLSC+ L+
Sbjct: 228 WGPETKQLLTAKEEFELIAQIQDLMNLEGVKNRLESQFGREPTLVEWAQAVGLSCHVLKL 287
Query: 318 QLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRF 377
QL SG RS+EKLI+ANLRMVVH+AK Y RGL QDLLQEG++GLMKS+EKFKPQAGCRF
Sbjct: 288 QLHSGNRSREKLINANLRMVVHIAKRYQNRGLGLQDLLQEGTVGLMKSIEKFKPQAGCRF 347
Query: 378 ASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKI 437
A+YAYWWIRQTI +A+F HSRTIRLPENVY LLGK++EAK+ Y +EGN PT EE+AR++
Sbjct: 348 ATYAYWWIRQTITKAIFQHSRTIRLPENVYGLLGKVMEAKRSYIQEGNHQPTAEEIARRV 407
Query: 438 GVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHARNL 497
G+ +DKLE LL R PLSMQQTVW+DQ+TT+QEITADT IE PD+ VAKQLMR+H R L
Sbjct: 408 GIAIDKLEKLLCFTRTPLSMQQTVWSDQNTTFQEITADTEIEIPDMSVAKQLMRKHIRGL 467
Query: 498 LHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGL 557
L+ L+ +ERRIIRLRFGIEDG +KSLSEIG VFGLSKERVRQLESRAL KLKQC+ SHGL
Sbjct: 468 LNILSLKERRIIRLRFGIEDGKQKSLSEIGNVFGLSKERVRQLESRALYKLKQCVGSHGL 527
Query: 558 DAYANLL 564
DAYA+LL
Sbjct: 528 DAYADLL 534
>M1BY22_SOLTU (tr|M1BY22) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400021553 PE=4 SV=1
Length = 562
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 275/547 (50%), Positives = 355/547 (64%), Gaps = 13/547 (2%)
Query: 19 TVMMLHEQAVPAVSSWPSGIAAQHFPTSVLLQEQRDEYKPLLHINKEDKTPQATSSMRPM 78
+V+MLHE A P +SS P +H P S + EQ+ E + LH+ KE+KT AT R +
Sbjct: 27 SVLMLHEHAAPVLSSVPHAYLGRHVPASAIGPEQQFENRLQLHLVKEEKTSLATIDRRLV 86
Query: 79 DVALVQ-EKNNTGNADELVHNFMQQLHLRCHLQNLLSSSLTREIAASSTLQSITDDSERS 137
D A + E+N+ ++++ ++ QL LRC + S + L +
Sbjct: 87 DAASSELEENDAVDSEQNINALQVQL-LRCPGPSY--SFPPYYLKGKGPLSPNKEPLHSK 143
Query: 138 PDGLQWNXXXXXXXXXXXXXXXXXXXXXXKLIEADDDDNDDSLPFGLASTCFPDSSVRRN 197
D L L+ D DDS ST D ++
Sbjct: 144 GDKL---MNFEPHSVVALARKALLASREAALLAEDSKLLDDSNFPNFLSTNLVDDKLKEQ 200
Query: 198 KIVRSTRLXXXXXXXXXXXXXXVLDDESYLTRKSDVQGRLRVEKKLKEGLDQNDPLRMFL 257
+ VRSTR + ++++ GR V +K+ E +D NDPLRMFL
Sbjct: 201 RTVRSTRFTERQSRKRGA------PKPTQQVQETNRSGRPDVRRKVNESIDLNDPLRMFL 254
Query: 258 WGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQT 317
WGPETK+LLT +EES+LI +IQ +L+EVK +LQ QF EPT EWA+ G++ L++
Sbjct: 255 WGPETKQLLTAKEESELIVKIQISMKLQEVKHQLQIQFAHEPTSVEWAEAAGITSRELKS 314
Query: 318 QLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRF 377
QL SG S+EKLI+ANLRMVVH+AK Y GRGL+ QDLLQEGSMGLMKSVEKFKPQAGCRF
Sbjct: 315 QLLSGKSSREKLINANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMKSVEKFKPQAGCRF 374
Query: 378 ASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKI 437
+YAYWWIRQ++R+A+F HSRTIRLPENVY LL K+ +AKK ++GN +PTKE++A
Sbjct: 375 PTYAYWWIRQSVRKAIFQHSRTIRLPENVYALLSKVKDAKKECIQQGNRYPTKEDIASCA 434
Query: 438 GVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHARNL 497
G++V++L+ LLS R PLSMQQ+VW+DQDTT+QEITAD AIE P++ V+KQLMRRH R L
Sbjct: 435 GMSVERLQNLLSNVRTPLSMQQSVWSDQDTTFQEITADNAIEAPELSVSKQLMRRHIRGL 494
Query: 498 LHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGL 557
L+ L+P+ER+IIRLRFGI DG KSLSEIGTVFGLSKERVRQLE+RAL KLKQ L HGL
Sbjct: 495 LNVLSPKERKIIRLRFGIGDGKPKSLSEIGTVFGLSKERVRQLETRALYKLKQNLNKHGL 554
Query: 558 DAYANLL 564
DAY++LL
Sbjct: 555 DAYSDLL 561
>E4MX68_THEHA (tr|E4MX68) mRNA, clone: RTFL01-17-E04 OS=Thellungiella halophila
PE=2 SV=1
Length = 547
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 271/548 (49%), Positives = 357/548 (65%), Gaps = 30/548 (5%)
Query: 19 TVMMLHEQ-AVPAVSSWPSGIAAQHFPTSVLLQEQRDEYKPLLHINKEDKTPQATSSMRP 77
+V+MLHEQ A P V+S ++HFP SVL QE R+E KPL H +ED+T Q T R
Sbjct: 29 SVVMLHEQTATPVVNSRHLTSLSRHFPASVLSQELREESKPLSHALREDRTSQLTLERRQ 88
Query: 78 MDVALVQEKNNTGNADELVHNFMQQLHLRCHLQNLLSSSLTREIAASSTLQSITDDSERS 137
D LV + + F QQL L NLL S LT E + + D
Sbjct: 89 FD-ELVSSRED--------EKFEQQLLHSAGLWNLLISPLTTEKQLPAVVSPSADA---- 135
Query: 138 PDGLQWNXXXXXXXXXXXXXXXXXXXXXXKLIEADDDDNDDSLPFGLASTCFPDSSVRRN 197
+ + EAD DN +S P+ +
Sbjct: 136 ------DLCDLVALAQKALSASKQAALLVENSEADPPDNPRDSLSTSSSMSLPE----KG 185
Query: 198 KIVRSTRLXXXXXXXXXXXXXXVLDDESYLTRKSDVQGRLRVEKKLKEGLDQNDPLRMFL 257
IVRS R +D E Y+ +K + +KK+K+G D +D L++FL
Sbjct: 186 TIVRSKRQLERRAKNRRAPKSNNMDSEGYVPQK------INAKKKMKQGFDTDDALQLFL 239
Query: 258 WGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQT 317
WGPETK+LLT +EE++LI+ IQ+L +LE+VK +L+SQ G EPT+ EWA+ +GLS L++
Sbjct: 240 WGPETKQLLTAKEEAELIAHIQHLIKLEKVKTKLESQNGCEPTIGEWAEAMGLSSPVLKS 299
Query: 318 QLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRF 377
++ G S+EKLI ANLR+VVH+AK Y RGL+FQDLLQEGSMGLMKSVEKFKPQ+GCRF
Sbjct: 300 EIHRGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRF 359
Query: 378 ASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKI 437
A+YAYWWIRQ+IR+++F +SRTIRLPENVY LLGK+ EA+K ++GN P+KE+LA +
Sbjct: 360 ATYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCIQDGNYRPSKEQLASHV 419
Query: 438 GVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHARNL 497
GV+ +KL+ LL R PLSMQQ +W+DQDTT+QE+T D+ IETP + V KQLMR H RNL
Sbjct: 420 GVSTEKLDKLLYNTRTPLSMQQPIWSDQDTTFQEVTPDSGIETPSMSVGKQLMRNHVRNL 479
Query: 498 LHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGL 557
L+ L+P+E+RII+LRFGI+ G ++SLSEIG ++GLSKERVRQLESRAL +LKQ ++SHGL
Sbjct: 480 LNVLSPKEKRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMSSHGL 539
Query: 558 DAYANLLV 565
+AYA+LLV
Sbjct: 540 NAYADLLV 547
>R0HNL5_9BRAS (tr|R0HNL5) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10022939mg PE=4 SV=1
Length = 547
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 271/548 (49%), Positives = 354/548 (64%), Gaps = 31/548 (5%)
Query: 20 VMMLHEQ-AVPAV-SSWPSGIAAQHFPTSVLLQEQRDEYKPLLHINKEDKTPQATSSMRP 77
V+MLHEQ A P V +S ++HFP SVL QE R+E +PL H +ED+T Q T R
Sbjct: 29 VVMLHEQTATPVVVNSRHLNSLSRHFPASVLSQEPREESRPLSHAFREDRTSQLTLERRQ 88
Query: 78 MDVALVQEKNNTGNADELVHNFMQQLHLRCHLQNLLSSSLTREIAASSTLQSITDDSERS 137
D + ++ T F QQL L NLL S +T E + + + D
Sbjct: 89 FDELVSSREDET---------FEQQLIQSAGLWNLLISPITAEKQLPAAVSPLADA---- 135
Query: 138 PDGLQWNXXXXXXXXXXXXXXXXXXXXXXKLIEADDDDNDDSLPFGLASTCFPDSSVRRN 197
EA+ DN +S P+
Sbjct: 136 ------ELCDVVALAQKALSASKQAALLADDTEANPSDNSGDSLSTSSSMSLPEEGT--- 186
Query: 198 KIVRSTRLXXXXXXXXXXXXXXVLDDESYLTRKSDVQGRLRVEKKLKEGLDQNDPLRMFL 257
IVRS RL +D+E Y+ +KS+ + KK K+G+D +D L++FL
Sbjct: 187 -IVRSKRLLERRAKNRRAPKSNDVDNEGYVPQKSNAK------KKFKQGVDTDDALQLFL 239
Query: 258 WGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQT 317
WGPETK+LLT +EE++LIS IQ+L +LE+VK +L+SQ G EPT+ EWA+ +G+S L++
Sbjct: 240 WGPETKQLLTAKEEAELISHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPVLKS 299
Query: 318 QLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRF 377
++ G S+EKLI ANLR+VVH+AK Y RGL+FQDLLQEGSMGLMKSVEKFKPQ+GCRF
Sbjct: 300 EIHRGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRF 359
Query: 378 ASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKI 437
A+YAYWWIRQ+IR+++F +SRTIRLPENVY LLGK+ EA+K +EGN P+KE+LA +
Sbjct: 360 ATYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEQLAGHV 419
Query: 438 GVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHARNL 497
GV+ +KL+ LL R PLSMQQ +W+DQDTT+QEIT D+ IE P + V KQLMR H RNL
Sbjct: 420 GVSKEKLDKLLYNTRTPLSMQQPIWSDQDTTFQEITPDSGIEIPTISVGKQLMRNHVRNL 479
Query: 498 LHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGL 557
L+ L+P+ER II+LRFGIE G ++SLSEIG ++GLSKERVRQLESRAL +LKQ ++SHGL
Sbjct: 480 LNVLSPKERSIIKLRFGIEGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMSSHGL 539
Query: 558 DAYANLLV 565
AYA+LLV
Sbjct: 540 HAYADLLV 547
>D7LJA3_ARALL (tr|D7LJA3) RNA polymerase sigma-70 factor OS=Arabidopsis lyrata
subsp. lyrata GN=SIGF PE=4 SV=1
Length = 546
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 271/548 (49%), Positives = 353/548 (64%), Gaps = 30/548 (5%)
Query: 19 TVMMLHEQAV-PAVSSWPSGIAAQHFPTSVLLQEQRDEYKPLLHINKEDKTPQATSSMRP 77
+V+MLHEQ P V+S ++HFP SVL QE R+E +PL H +ED+T Q T R
Sbjct: 28 SVVMLHEQTTTPVVNSRHLNSLSRHFPASVLSQEPREESRPLSHALREDRTSQLTLERRQ 87
Query: 78 MDVALVQEKNNTGNADELVHNFMQQLHLRCHLQNLLSSSLTREIAASSTLQSITDDSERS 137
D LV + + F QQL L NLL S LT E + + D
Sbjct: 88 FD-ELVSSRED--------EKFEQQLLHSAGLWNLLISPLTAETKLPPVVPPLAD----- 133
Query: 138 PDGLQWNXXXXXXXXXXXXXXXXXXXXXXKLIEADDDDNDDSLPFGLASTCFPDSSVRRN 197
L+ D + N G ST S +
Sbjct: 134 ---------AELCDIVALAQKALSASKQAALLADDTEANPSDNTRGSLSTSSSMSLPEKG 184
Query: 198 KIVRSTRLXXXXXXXXXXXXXXVLDDESYLTRKSDVQGRLRVEKKLKEGLDQNDPLRMFL 257
IVRS R +D+E Y+ +K + +KK K+G+D +D L++FL
Sbjct: 185 AIVRSKRQLERRAKNRRAPKSNDVDNEGYVPQK------INAKKKFKQGVDTDDALQLFL 238
Query: 258 WGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQT 317
WGPETK+LLT +EE++LIS IQ+L +LE+VK +L+SQ G EPT+ EWA+ +G+S L++
Sbjct: 239 WGPETKQLLTAKEEAELISHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPDLKS 298
Query: 318 QLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRF 377
++ G S+EKLI ANLR+VVH+AK Y RGL+FQDLLQEGSMGLMKSVEKFKPQ+GCRF
Sbjct: 299 EIHRGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRF 358
Query: 378 ASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKI 437
A+YAYWWIRQ+IR+++F +SRTIRLPENVY LLGK+ EA+K +EGN P+KE+LA +
Sbjct: 359 ATYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEQLAGHV 418
Query: 438 GVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHARNL 497
GV+ +KL+ LL R PLSMQQ +W+DQDTT+QEIT D+ IETP + V KQ+MR H RNL
Sbjct: 419 GVSTEKLDKLLYNTRTPLSMQQPIWSDQDTTFQEITPDSGIETPTMSVGKQMMRNHVRNL 478
Query: 498 LHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGL 557
L+ L+P+ERRII+LRFGI+ G ++SLSEIG ++GLSKERVRQLESRAL +LKQ + SHGL
Sbjct: 479 LNVLSPKERRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQHMNSHGL 538
Query: 558 DAYANLLV 565
AYA+LLV
Sbjct: 539 HAYADLLV 546
>K4CQJ3_SOLLC (tr|K4CQJ3) Uncharacterized protein OS=Solanum lycopersicum
GN=Solyc09g008040.2 PE=4 SV=1
Length = 563
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 273/547 (49%), Positives = 350/547 (63%), Gaps = 12/547 (2%)
Query: 19 TVMMLHEQAVPAVSSWPSGIAAQHFPTSVLLQEQRDEYKPLLHINKEDKTPQATSSMRPM 78
+V+MLHE A P +SS P ++ P S + EQ E + LH+ KE+KT AT R +
Sbjct: 27 SVLMLHEHAAPVLSSVPHTYLGRYVPASAIGPEQHFENRLQLHLVKEEKTSLATIDRRLV 86
Query: 79 DVALVQ-EKNNTGNADELVHNFMQQLHLRCHLQNLLSSSLTREIAASSTLQSITDDSERS 137
+ A + E+N+ ++++ ++ QL H S + L +
Sbjct: 87 EAASSELEENDAVDSEQNINALQVQL---LHWPGPSYSFPPYYLKGKGPLSPNKEPLHSK 143
Query: 138 PDGLQWNXXXXXXXXXXXXXXXXXXXXXXKLIEADDDDNDDSLPFGLASTCFPDSSVRRN 197
D L L+ D DDS ST D ++
Sbjct: 144 GDKL---MNFEPHSVVALARKALLASKEAALLAEDSKLLDDSHFPNFLSTHLVDDKLKEQ 200
Query: 198 KIVRSTRLXXXXXXXXXXXXXXVLDDESYLTRKSDVQGRLRVEKKLKEGLDQNDPLRMFL 257
+ VRSTR E+ ++ GR V +K+ E +D NDPLRMFL
Sbjct: 201 RTVRSTRFIERQSRKRGAPKPIQEVQET-----NNRSGRPDVRRKVNESIDLNDPLRMFL 255
Query: 258 WGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQT 317
WGPETK+LLT +EES+LI +IQ +L+EVK +LQ QF REPT EWA+ G++ L++
Sbjct: 256 WGPETKQLLTAKEESELIVKIQISMKLQEVKHQLQIQFAREPTSLEWAEAAGITSRELKS 315
Query: 318 QLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRF 377
QL SG S+EKLI+ANLRMVVH+AK Y GRGL+ QDLLQEGSMGLMKSVEKFKPQAGCRF
Sbjct: 316 QLLSGKSSREKLINANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMKSVEKFKPQAGCRF 375
Query: 378 ASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKI 437
+YAYWWIRQ++R+A+F HSRTIRLPENVY LL K+ +AK+ R+GN HPTKE++A
Sbjct: 376 PTYAYWWIRQSVRKAIFQHSRTIRLPENVYALLSKVKDAKRECIRQGNRHPTKEDIASCA 435
Query: 438 GVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHARNL 497
G++V++L+ LLS R PLSMQQ+VW+DQDTT+QEITAD AIE P++ V+KQLMRRH R L
Sbjct: 436 GMSVERLQNLLSNVRTPLSMQQSVWSDQDTTFQEITADNAIEAPELSVSKQLMRRHIRGL 495
Query: 498 LHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGL 557
L+ L+P+ER+IIRLRFGI DG KSLSEIG VFGLSKERVRQLE+RAL KLKQ L HGL
Sbjct: 496 LNVLSPKERKIIRLRFGIGDGKPKSLSEIGAVFGLSKERVRQLETRALYKLKQNLNKHGL 555
Query: 558 DAYANLL 564
DAY++LL
Sbjct: 556 DAYSDLL 562
>M1BY20_SOLTU (tr|M1BY20) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400021553 PE=4 SV=1
Length = 582
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 275/567 (48%), Positives = 355/567 (62%), Gaps = 33/567 (5%)
Query: 19 TVMMLHEQAVPAVSSWPSGIAAQHFPTSVLLQEQRDEYKPLLHINKEDKTPQATSSMRPM 78
+V+MLHE A P +SS P +H P S + EQ+ E + LH+ KE+KT AT R +
Sbjct: 27 SVLMLHEHAAPVLSSVPHAYLGRHVPASAIGPEQQFENRLQLHLVKEEKTSLATIDRRLV 86
Query: 79 DVALVQ-EKNNTGNADELVHNFMQQLHLRCHLQNLLSSSLTREIAASSTLQSITDDSERS 137
D A + E+N+ ++++ ++ QL LRC + S + L +
Sbjct: 87 DAASSELEENDAVDSEQNINALQVQL-LRCPGPSY--SFPPYYLKGKGPLSPNKEPLHSK 143
Query: 138 PDGLQWNXXXXXXXXXXXXXXXXXXXXXXKLIEADDDDNDDSLPFGLASTCFPDSSVRRN 197
D L L+ D DDS ST D ++
Sbjct: 144 GDKL---MNFEPHSVVALARKALLASREAALLAEDSKLLDDSNFPNFLSTNLVDDKLKEQ 200
Query: 198 KIVRSTRLXXXXXXXXXXXXXXVLDDESYLTRKSDVQGRLRVEKKLKEGLDQNDPLRMFL 257
+ VRSTR + ++++ GR V +K+ E +D NDPLRMFL
Sbjct: 201 RTVRSTRFTERQSRKRGA------PKPTQQVQETNRSGRPDVRRKVNESIDLNDPLRMFL 254
Query: 258 WGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQT 317
WGPETK+LLT +EES+LI +IQ +L+EVK +LQ QF EPT EWA+ G++ L++
Sbjct: 255 WGPETKQLLTAKEESELIVKIQISMKLQEVKHQLQIQFAHEPTSVEWAEAAGITSRELKS 314
Query: 318 QLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRF 377
QL SG S+EKLI+ANLRMVVH+AK Y GRGL+ QDLLQEGSMGLMKSVEKFKPQAGCRF
Sbjct: 315 QLLSGKSSREKLINANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMKSVEKFKPQAGCRF 374
Query: 378 ASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKI 437
+YAYWWIRQ++R+A+F HSRTIRLPENVY LL K+ +AKK ++GN +PTKE++A
Sbjct: 375 PTYAYWWIRQSVRKAIFQHSRTIRLPENVYALLSKVKDAKKECIQQGNRYPTKEDIASCA 434
Query: 438 GVTVDKLEILLSAARIPLSMQQTVWTDQDTTY--------------------QEITADTA 477
G++V++L+ LLS R PLSMQQ+VW+DQDTT+ QEITAD A
Sbjct: 435 GMSVERLQNLLSNVRTPLSMQQSVWSDQDTTFQEIFDLVLTVAKERISFFSIQEITADNA 494
Query: 478 IETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERV 537
IE P++ V+KQLMRRH R LL+ L+P+ER+IIRLRFGI DG KSLSEIGTVFGLSKERV
Sbjct: 495 IEAPELSVSKQLMRRHIRGLLNVLSPKERKIIRLRFGIGDGKPKSLSEIGTVFGLSKERV 554
Query: 538 RQLESRALDKLKQCLASHGLDAYANLL 564
RQLE+RAL KLKQ L HGLDAY++LL
Sbjct: 555 RQLETRALYKLKQNLNKHGLDAYSDLL 581
>M4DL32_BRARP (tr|M4DL32) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra017213 PE=4 SV=1
Length = 533
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 267/551 (48%), Positives = 360/551 (65%), Gaps = 51/551 (9%)
Query: 19 TVMMLHEQ-AVPAVSSWPSGIAAQHFPTSVLLQEQRDEYKP--LLHINKEDKTPQATSSM 75
+V+MLHEQ A P ++S ++HFP SVL QE R+E +P L H +ED+T Q +
Sbjct: 30 SVVMLHEQTATPVINSRHLASLSRHFPASVLSQEPREESRPPPLSHSLREDRTSQQLTLE 89
Query: 76 RPMDVALVQEKNNTGNADELVHNFMQQLHLRCHLQNLLSSSLTREIAASSTLQSITDDSE 135
R LV + + F QQL L NLL ++ S T+ S +D+
Sbjct: 90 RRQFDGLVSSRED--------EKFEQQLLQSAGLWNLL-------LSPSPTVVSPLEDA- 133
Query: 136 RSPDGLQWNXXXXXXXXXXXXXXXXXXXXXXKLIEADDDDNDDSLPFGLASTCFPDSSVR 195
K +D++ + P +S + +V
Sbjct: 134 --------------------VALAHKALSASKQAALLAEDSETAAPPTSSSMSLEEGTV- 172
Query: 196 RNKIVRSTRLXXXXXXXXXXXXXXVLDDES-YLTRKSDVQGRLRVEKKLKEGLDQNDPLR 254
VRS +L LD+ES YL +KS+ + KK+++G D +D L+
Sbjct: 173 ----VRSKKLLERRARNRRAPKPNGLDNESSYLPQKSNAK------KKMRQGFDNDDSLQ 222
Query: 255 MFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYA 314
+FLWGPETK+LLT +EE++LI+ IQNL +LE+VK +L+SQ G EPT+AEWA+ +G+S
Sbjct: 223 LFLWGPETKQLLTAKEEAELITHIQNLIKLEKVKTKLESQNGCEPTIAEWAEALGISGPV 282
Query: 315 LQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAG 374
L++++ G S+EKLI ANLR+VVH+AK Y RGL+FQDLLQEGSMGLMKSVEKFKPQ+G
Sbjct: 283 LKSEIHRGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSG 342
Query: 375 CRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELA 434
RFA+YAYWWIRQ+IR+++F +SRTIRLPENVY LLGK+ EA+K +EGN P+KEELA
Sbjct: 343 FRFATYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYLPSKEELA 402
Query: 435 RKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHA 494
+GV+ +KL+ LL R PLSMQQ +W+DQD T+QE+T D+ IETPD+ V KQ+MR H
Sbjct: 403 GHVGVSTEKLDKLLYNTRTPLSMQQPIWSDQDITFQEVTPDSGIETPDMSVGKQMMRNHV 462
Query: 495 RNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLAS 554
RNLL+ L+P+ER+II+LRFGI+ G ++SLSEIG ++GLSKERVRQLESRAL +LKQ + S
Sbjct: 463 RNLLNVLSPKERKIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMNS 522
Query: 555 HGLDAYANLLV 565
HGL+AYA+LLV
Sbjct: 523 HGLNAYADLLV 533
>M1BY21_SOLTU (tr|M1BY21) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400021553 PE=4 SV=1
Length = 311
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/310 (68%), Positives = 259/310 (83%)
Query: 255 MFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYA 314
MFLWGPETK+LLT +EES+LI +IQ +L+EVK +LQ QF EPT EWA+ G++
Sbjct: 1 MFLWGPETKQLLTAKEESELIVKIQISMKLQEVKHQLQIQFAHEPTSVEWAEAAGITSRE 60
Query: 315 LQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAG 374
L++QL SG S+EKLI+ANLRMVVH+AK Y GRGL+ QDLLQEGSMGLMKSVEKFKPQAG
Sbjct: 61 LKSQLLSGKSSREKLINANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMKSVEKFKPQAG 120
Query: 375 CRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELA 434
CRF +YAYWWIRQ++R+A+F HSRTIRLPENVY LL K+ +AKK ++GN +PTKE++A
Sbjct: 121 CRFPTYAYWWIRQSVRKAIFQHSRTIRLPENVYALLSKVKDAKKECIQQGNRYPTKEDIA 180
Query: 435 RKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHA 494
G++V++L+ LLS R PLSMQQ+VW+DQDTT+QEITAD AIE P++ V+KQLMRRH
Sbjct: 181 SCAGMSVERLQNLLSNVRTPLSMQQSVWSDQDTTFQEITADNAIEAPELSVSKQLMRRHI 240
Query: 495 RNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLAS 554
R LL+ L+P+ER+IIRLRFGI DG KSLSEIGTVFGLSKERVRQLE+RAL KLKQ L
Sbjct: 241 RGLLNVLSPKERKIIRLRFGIGDGKPKSLSEIGTVFGLSKERVRQLETRALYKLKQNLNK 300
Query: 555 HGLDAYANLL 564
HGLDAY++LL
Sbjct: 301 HGLDAYSDLL 310
>M0RSY5_MUSAM (tr|M0RSY5) Uncharacterized protein OS=Musa acuminata subsp.
malaccensis PE=4 SV=1
Length = 579
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 248/567 (43%), Positives = 334/567 (58%), Gaps = 35/567 (6%)
Query: 19 TVMMLHEQAVPAVSSWPSGIAAQHFPTSVLLQEQRDEYKPLLHINKEDKTPQATSSMRPM 78
+V ML +QA + P+ H SVL +EQ D+ K H+NK +K+ QAT
Sbjct: 28 SVPMLLDQASQPMIHVPATQVVHHITASVLSKEQCDDLK-TNHLNKVEKSVQATPD---- 82
Query: 79 DVALVQEKNNTGNADELVHNFMQQL-HLRCHLQNLLS------------SSLTREIAASS 125
+ E + + + H F Q L +L C L S SL +
Sbjct: 83 --KWLTEAGRSCSEEREKHEFNQYLRYLECQLSYQPSLWYPFPPLDEEKQSLPVSVGPEE 140
Query: 126 TLQSITDDS-----ERSPDGLQWNXXXXXXXXXXXXXXXXXXXXXXKLIEADDDDNDDSL 180
T ++ DS E + D + I + D + L
Sbjct: 141 TSTCVSGDSSAMQVENTKDCITPADVLALAKKAMIASKIAASLVEQSNILGIEVDKSNFL 200
Query: 181 PFGLASTCFPDSSVRRNKIVRSTRLXXXXXXXXXXXXXXVLDDESYLTRKSDVQGRLRVE 240
F S D+ + VRS +L V + + +
Sbjct: 201 GFDEGSN--DDTFFKEETTVRSRKLLERRSKKRK-----VSKNPNNFVHHGASSVTINQS 253
Query: 241 KKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQ--NLFRLEEVKIRLQSQFGRE 298
KK+ + LD NDPLR+FLWGPETK+LLT +EE L +I+ +L RLEEVK RLQSQ RE
Sbjct: 254 KKIDKRLDSNDPLRLFLWGPETKQLLTVKEEKDLFVKIEACDLMRLEEVKERLQSQSDRE 313
Query: 299 PTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEG 358
PT+AEWA VG+SC LQ+ L SG R++EK+I+AN R+VVHVA+ Y G+GL+ QDLLQEG
Sbjct: 314 PTLAEWAQAVGMSCQDLQSCLSSGRRNREKMIYANFRLVVHVARQYEGKGLNIQDLLQEG 373
Query: 359 SMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKK 418
S GLMKS+EKFKP+AGCRF +YAYWWIRQ+I++A+F +SRTIRLPEN + L + EA++
Sbjct: 374 SRGLMKSLEKFKPRAGCRFPTYAYWWIRQSIKKAIFKNSRTIRLPENAFARLKSIREARR 433
Query: 419 FYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAI 478
+EG + PT EE+A+++G+TV KLEILL +R P+S+Q+ W DQD T+QE AD I
Sbjct: 434 LCIQEG-LLPTNEEIAKRVGITVQKLEILLLNSRYPISIQRHPWLDQDVTFQETVADPKI 492
Query: 479 ETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVR 538
E PD+ +AKQ+MR+H RNLL+ L PRER I++ RFGI +KSLSEIG ++GLSKERVR
Sbjct: 493 EIPDLVIAKQMMRQHVRNLLNILKPRERVIVQYRFGIRCSEQKSLSEIGAMYGLSKERVR 552
Query: 539 QLESRALDKLKQCLASHGLDAYANLLV 565
QLES+AL KL++CL S GL+AY +LL+
Sbjct: 553 QLESQALGKLRKCLQSQGLEAYLDLLI 579
>I1K2F4_SOYBN (tr|I1K2F4) Uncharacterized protein (Fragment) OS=Glycine max PE=4
SV=1
Length = 312
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/292 (69%), Positives = 233/292 (79%), Gaps = 3/292 (1%)
Query: 182 FGLASTCFPDSSVRRNKIVRSTRLXXXXXXXXXXXXXXVLDDESYLTRKSDVQGRLRVEK 241
LAST D S+ RNK VRSTRL V+DDE+YL RK D Q +LR EK
Sbjct: 1 LSLASTSLADPSIGRNKTVRSTRLLERRSKQRKVPKSKVIDDETYLARKDDAQEKLRAEK 60
Query: 242 KLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTM 301
K E DQ+DPLR+FLWGPETK+LLT E+ESQLISQIQ+L RLEEVK LQSQFGREPTM
Sbjct: 61 KKNEEHDQDDPLRLFLWGPETKQLLTLEQESQLISQIQDLLRLEEVKTNLQSQFGREPTM 120
Query: 302 AEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMG 361
AEWA+G GL+C LQ+QL SG RS+EKLI ANLRMVVHVAK+Y GRGLS QDLLQEGSMG
Sbjct: 121 AEWAEGAGLNCRLLQSQLHSGIRSREKLIQANLRMVVHVAKSYQGRGLSLQDLLQEGSMG 180
Query: 362 LMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLP---ENVYTLLGKLIEAKK 418
LMKSVEKF P AG RF +YA+WWIRQ IR+A+F HSRTIRLP E V+ LLGK+IEAKK
Sbjct: 181 LMKSVEKFNPLAGSRFGNYAFWWIRQAIRKAVFRHSRTIRLPINLEKVFILLGKVIEAKK 240
Query: 419 FYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQ 470
Y +EGN+HPTKEELAR++GVTV+K++ LL +ARIP+SMQQTVW DQ+TT+Q
Sbjct: 241 LYIQEGNLHPTKEELARRVGVTVEKIDKLLFSARIPISMQQTVWADQNTTFQ 292
>G7L2W1_MEDTR (tr|G7L2W1) RNA polymerase sigma factor rpoD OS=Medicago truncatula
GN=MTR_7g101610 PE=4 SV=1
Length = 365
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/250 (70%), Positives = 209/250 (83%), Gaps = 1/250 (0%)
Query: 316 QTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGC 375
Q G RSK+KLIHANLR+VVH+AK Y G S L EGSMGLM+SVEKFKPQAGC
Sbjct: 117 QNDFIGGNRSKDKLIHANLRLVVHIAKYYQG-AWSQPXGLIEGSMGLMRSVEKFKPQAGC 175
Query: 376 RFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELAR 435
RF++YAYWWIRQTIRRALFLHS+TIRLPEN Y LLGK+ EAKK Y +EGN+HPTKEE+A+
Sbjct: 176 RFSTYAYWWIRQTIRRALFLHSKTIRLPENFYALLGKIAEAKKSYIKEGNLHPTKEEIAK 235
Query: 436 KIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHAR 495
++G+TVD+LE+LL + R PLSM++ VW D DTT+QEITAD++IE P+V VAKQLMR H R
Sbjct: 236 RVGITVDRLEMLLFSTRTPLSMERAVWADSDTTFQEITADSSIEIPNVCVAKQLMRSHVR 295
Query: 496 NLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASH 555
NLL L P+ER+++RLRFGIEDGYEKSL+EIG V G+ KERVRQLES+AL+KLKQCL S
Sbjct: 296 NLLGILPPKERKVLRLRFGIEDGYEKSLTEIGKVLGVCKERVRQLESQALNKLKQCLVSQ 355
Query: 556 GLDAYANLLV 565
LDAY +L+V
Sbjct: 356 QLDAYVDLIV 365
>R0FW66_9BRAS (tr|R0FW66) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10022939mg PE=4 SV=1
Length = 456
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 206/453 (45%), Positives = 275/453 (60%), Gaps = 31/453 (6%)
Query: 20 VMMLHEQ-AVPAV-SSWPSGIAAQHFPTSVLLQEQRDEYKPLLHINKEDKTPQATSSMRP 77
V+MLHEQ A P V +S ++HFP SVL QE R+E +PL H +ED+T Q T R
Sbjct: 29 VVMLHEQTATPVVVNSRHLNSLSRHFPASVLSQEPREESRPLSHAFREDRTSQLTLERRQ 88
Query: 78 MDVALVQEKNNTGNADELVHNFMQQLHLRCHLQNLLSSSLTREIAASSTLQSITDDSERS 137
D + ++ T F QQL L NLL S +T E + + + D
Sbjct: 89 FDELVSSREDET---------FEQQLIQSAGLWNLLISPITAEKQLPAAVSPLADA---- 135
Query: 138 PDGLQWNXXXXXXXXXXXXXXXXXXXXXXKLIEADDDDNDDSLPFGLASTCFPDSSVRRN 197
EA+ DN +S P+
Sbjct: 136 ------ELCDVVALAQKALSASKQAALLADDTEANPSDNSGDSLSTSSSMSLPEEGT--- 186
Query: 198 KIVRSTRLXXXXXXXXXXXXXXVLDDESYLTRKSDVQGRLRVEKKLKEGLDQNDPLRMFL 257
IVRS RL +D+E Y+ +KS+ + KK K+G+D +D L++FL
Sbjct: 187 -IVRSKRLLERRAKNRRAPKSNDVDNEGYVPQKSNAK------KKFKQGVDTDDALQLFL 239
Query: 258 WGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQT 317
WGPETK+LLT +EE++LIS IQ+L +LE+VK +L+SQ G EPT+ EWA+ +G+S L++
Sbjct: 240 WGPETKQLLTAKEEAELISHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPVLKS 299
Query: 318 QLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRF 377
++ G S+EKLI ANLR+VVH+AK Y RGL+FQDLLQEGSMGLMKSVEKFKPQ+GCRF
Sbjct: 300 EIHRGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRF 359
Query: 378 ASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKI 437
A+YAYWWIRQ+IR+++F +SRTIRLPENVY LLGK+ EA+K +EGN P+KE+LA +
Sbjct: 360 ATYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEQLAGHV 419
Query: 438 GVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQ 470
GV+ +KL+ LL R PLSMQQ +W+DQDTT+Q
Sbjct: 420 GVSKEKLDKLLYNTRTPLSMQQPIWSDQDTTFQ 452
>K4A7Y8_SETIT (tr|K4A7Y8) Uncharacterized protein OS=Setaria italica
GN=Si034994m.g PE=4 SV=1
Length = 554
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 162/319 (50%), Positives = 225/319 (70%), Gaps = 1/319 (0%)
Query: 247 LDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWAD 306
LD ++P ++FL ET + LT +EE Q+ SQIQNL +LEE + +L+ Q GREPT+AEWA
Sbjct: 237 LDPDEPFKLFLRDRETTEFLTAKEEKQMFSQIQNLMKLEEAQRKLEVQCGREPTVAEWAA 296
Query: 307 GVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSV 366
VG+SC LQ+ +R G R +EK+ +N R+V+HVA+ Y G GL QDL+Q+G GLMK+
Sbjct: 297 AVGMSCRELQSSIRIGRRCREKMARSNFRLVIHVARKYEGYGLDIQDLVQDGCCGLMKTF 356
Query: 367 EKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNV 426
EKF P GCRF +YAYWWIRQ+I++++F +SR IRLPE+V+ LL K+ +A+ EG
Sbjct: 357 EKFNPSKGCRFPTYAYWWIRQSIKKSIFKNSRLIRLPESVFALLRKVGKARLECIMEGE- 415
Query: 427 HPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVA 486
PT E +AR+ G+T++KL L + R P SMQ VW+D TYQEIT D E P++ V
Sbjct: 416 QPTNENVARRAGITIEKLARLRAKTRKPRSMQDRVWSDDGVTYQEITEDPNFEPPELSVD 475
Query: 487 KQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALD 546
+ +MR+ RN L L+PRE+ II RFGI DG K+L IG ++GLSKER+RQ++++ALD
Sbjct: 476 RLMMRQQVRNFLAILSPREKEIIEHRFGIHDGEPKTLHVIGDMYGLSKERIRQVQNKALD 535
Query: 547 KLKQCLASHGLDAYANLLV 565
KLK+ +++ G D Y +LL
Sbjct: 536 KLKRSVSAQGFDVYFDLLT 554
>I1GKK0_BRADI (tr|I1GKK0) Uncharacterized protein OS=Brachypodium distachyon
GN=BRADI1G00750 PE=4 SV=1
Length = 564
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 160/319 (50%), Positives = 221/319 (69%), Gaps = 1/319 (0%)
Query: 247 LDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWAD 306
LD ++P ++FL PET + LT +EE QL S++QNL +LEE + RL++Q GREP + EWA
Sbjct: 244 LDPDEPFKLFLRDPETTEFLTAKEEKQLFSEVQNLMKLEEAQRRLEAQCGREPAIEEWAK 303
Query: 307 GVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSV 366
VG+SC LQ+ + G R +EK+ +N R+V+HVA+ Y G GL +DL+Q+G GLMK+
Sbjct: 304 AVGMSCKDLQSSIHIGRRCREKMARSNFRLVIHVARKYQGYGLDIEDLVQDGCCGLMKTF 363
Query: 367 EKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNV 426
EKF P GCRF +YAYWWIRQ I++++F HSR IRLPE+VY LL K+ +A+ EG
Sbjct: 364 EKFNPSKGCRFPTYAYWWIRQAIKKSIFKHSRLIRLPESVYALLKKVGKARLECILEGE- 422
Query: 427 HPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVA 486
PT E +AR+ G+T++KL L + R S+Q VW D T+QEIT D IE PD+ V
Sbjct: 423 QPTNENVARRAGITIEKLAKLKAKTRKSRSLQDRVWPDDGVTFQEITEDPNIEPPDLVVD 482
Query: 487 KQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALD 546
+ +MR+ R+ L L+ RE+ II RFGI DG K+L IG ++GLSKER+RQL++RALD
Sbjct: 483 RMMMRQQVRDFLGILSTREKEIIEHRFGIYDGEPKTLHVIGDMYGLSKERIRQLQNRALD 542
Query: 547 KLKQCLASHGLDAYANLLV 565
KLK+ +++ G D Y +LL
Sbjct: 543 KLKRSVSNQGFDVYLDLLT 561
>J3MRH6_ORYBR (tr|J3MRH6) Uncharacterized protein OS=Oryza brachyantha
GN=OB08G17050 PE=4 SV=1
Length = 577
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 161/319 (50%), Positives = 221/319 (69%), Gaps = 1/319 (0%)
Query: 247 LDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWAD 306
LD ++P R+FL ET + LT +EE L S+IQ L +LEE +L+ Q GREPT+AEWA+
Sbjct: 260 LDPDEPFRLFLRDRETTEFLTAKEERHLFSKIQILMKLEEAHRKLEVQCGREPTLAEWAE 319
Query: 307 GVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSV 366
VG+S LQ+ +R+G R +EK+ +N R+V+HVA+ Y G GL QDL+Q+G GLMK+
Sbjct: 320 AVGMSSKELQSSIRTGRRCREKMARSNFRLVIHVARKYEGYGLDIQDLVQDGCCGLMKTF 379
Query: 367 EKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNV 426
EKF P GCRF +YAYWWIRQ+I++++F +SR IRLPE+VY LL K+ +A+ EG
Sbjct: 380 EKFNPSKGCRFPTYAYWWIRQSIKKSIFKNSRLIRLPESVYALLRKVGKARMECIMEGE- 438
Query: 427 HPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVA 486
PT +AR+ G+T++KL L + R P SMQ VW+D+ T+QEIT D +E PD+ V
Sbjct: 439 QPTNANVARRAGITIEKLAKLRAKTRKPRSMQDHVWSDEGVTFQEITEDPNVEPPDLSVD 498
Query: 487 KQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALD 546
+ +MR+ R+ L L+PRE+ II RFGI DG K+L IG +FGLSKER+RQL++RAL
Sbjct: 499 RMMMRQQVRDFLGILSPREKEIIEHRFGIHDGEPKTLHVIGDMFGLSKERIRQLQNRALQ 558
Query: 547 KLKQCLASHGLDAYANLLV 565
KLK ++ G D Y +LL
Sbjct: 559 KLKTSASTQGFDVYFDLLT 577
>M0WB53_HORVD (tr|M0WB53) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 550
Score = 333 bits (855), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 160/325 (49%), Positives = 221/325 (68%), Gaps = 1/325 (0%)
Query: 241 KKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPT 300
KK L ++P R+FL ET + LT +EE L SQIQNL RLEE + RL+ Q GREPT
Sbjct: 224 KKYGRVLGPDEPFRLFLRDRETTEFLTAKEERHLFSQIQNLMRLEEAQRRLEEQCGREPT 283
Query: 301 MAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSM 360
+ EWA VG+SC LQ+ + G R +EK+ +N R+V+HVA+ Y G GL +DL+Q+G
Sbjct: 284 LPEWAQAVGMSCKDLQSSIHIGRRCREKMARSNFRLVIHVARKYQGYGLDIEDLVQDGCC 343
Query: 361 GLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFY 420
GLMK+ EKF P GCRF +YAYWWIRQ I++++F HSR IRLPE+VY L K+ +A+
Sbjct: 344 GLMKTFEKFNPSKGCRFPTYAYWWIRQAIKKSIFKHSRLIRLPESVYARLKKVGKARLEC 403
Query: 421 NREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIET 480
EG PT + +AR+ G++++KL L + R P SMQ VW++ T+QEIT D I++
Sbjct: 404 ILEGE-QPTNQNVARRAGISIEKLAKLKAKTRKPRSMQDQVWSNDAVTFQEITEDPNIDS 462
Query: 481 PDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQL 540
PD+ V + +MR+ R L L+ RE+ I+ RFGI DG K+L IG ++GLSKER+RQL
Sbjct: 463 PDLVVDRIMMRQQVREFLGILSTREKEIVEHRFGIYDGEPKTLHVIGDMYGLSKERIRQL 522
Query: 541 ESRALDKLKQCLASHGLDAYANLLV 565
++RALDKLK+ +++ G D Y +LL
Sbjct: 523 QNRALDKLKRSVSTQGFDVYLDLLT 547
>M0WB57_HORVD (tr|M0WB57) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 553
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 160/325 (49%), Positives = 221/325 (68%), Gaps = 1/325 (0%)
Query: 241 KKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPT 300
KK L ++P R+FL ET + LT +EE L SQIQNL RLEE + RL+ Q GREPT
Sbjct: 227 KKYGRVLGPDEPFRLFLRDRETTEFLTAKEERHLFSQIQNLMRLEEAQRRLEEQCGREPT 286
Query: 301 MAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSM 360
+ EWA VG+SC LQ+ + G R +EK+ +N R+V+HVA+ Y G GL +DL+Q+G
Sbjct: 287 LPEWAQAVGMSCKDLQSSIHIGRRCREKMARSNFRLVIHVARKYQGYGLDIEDLVQDGCC 346
Query: 361 GLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFY 420
GLMK+ EKF P GCRF +YAYWWIRQ I++++F HSR IRLPE+VY L K+ +A+
Sbjct: 347 GLMKTFEKFNPSKGCRFPTYAYWWIRQAIKKSIFKHSRLIRLPESVYARLKKVGKARLEC 406
Query: 421 NREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIET 480
EG PT + +AR+ G++++KL L + R P SMQ VW++ T+QEIT D I++
Sbjct: 407 ILEGE-QPTNQNVARRAGISIEKLAKLKAKTRKPRSMQDQVWSNDAVTFQEITEDPNIDS 465
Query: 481 PDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQL 540
PD+ V + +MR+ R L L+ RE+ I+ RFGI DG K+L IG ++GLSKER+RQL
Sbjct: 466 PDLVVDRIMMRQQVREFLGILSTREKEIVEHRFGIYDGEPKTLHVIGDMYGLSKERIRQL 525
Query: 541 ESRALDKLKQCLASHGLDAYANLLV 565
++RALDKLK+ +++ G D Y +LL
Sbjct: 526 QNRALDKLKRSVSTQGFDVYLDLLT 550
>M0WB51_HORVD (tr|M0WB51) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 515
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 160/325 (49%), Positives = 221/325 (68%), Gaps = 1/325 (0%)
Query: 241 KKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPT 300
KK L ++P R+FL ET + LT +EE L SQIQNL RLEE + RL+ Q GREPT
Sbjct: 189 KKYGRVLGPDEPFRLFLRDRETTEFLTAKEERHLFSQIQNLMRLEEAQRRLEEQCGREPT 248
Query: 301 MAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSM 360
+ EWA VG+SC LQ+ + G R +EK+ +N R+V+HVA+ Y G GL +DL+Q+G
Sbjct: 249 LPEWAQAVGMSCKDLQSSIHIGRRCREKMARSNFRLVIHVARKYQGYGLDIEDLVQDGCC 308
Query: 361 GLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFY 420
GLMK+ EKF P GCRF +YAYWWIRQ I++++F HSR IRLPE+VY L K+ +A+
Sbjct: 309 GLMKTFEKFNPSKGCRFPTYAYWWIRQAIKKSIFKHSRLIRLPESVYARLKKVGKARLEC 368
Query: 421 NREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIET 480
EG PT + +AR+ G++++KL L + R P SMQ VW++ T+QEIT D I++
Sbjct: 369 ILEGE-QPTNQNVARRAGISIEKLAKLKAKTRKPRSMQDQVWSNDAVTFQEITEDPNIDS 427
Query: 481 PDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQL 540
PD+ V + +MR+ R L L+ RE+ I+ RFGI DG K+L IG ++GLSKER+RQL
Sbjct: 428 PDLVVDRIMMRQQVREFLGILSTREKEIVEHRFGIYDGEPKTLHVIGDMYGLSKERIRQL 487
Query: 541 ESRALDKLKQCLASHGLDAYANLLV 565
++RALDKLK+ +++ G D Y +LL
Sbjct: 488 QNRALDKLKRSVSTQGFDVYLDLLT 512
>M0WB48_HORVD (tr|M0WB48) Uncharacterized protein OS=Hordeum vulgare var.
distichum PE=4 SV=1
Length = 397
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 160/325 (49%), Positives = 221/325 (68%), Gaps = 1/325 (0%)
Query: 241 KKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPT 300
KK L ++P R+FL ET + LT +EE L SQIQNL RLEE + RL+ Q GREPT
Sbjct: 71 KKYGRVLGPDEPFRLFLRDRETTEFLTAKEERHLFSQIQNLMRLEEAQRRLEEQCGREPT 130
Query: 301 MAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSM 360
+ EWA VG+SC LQ+ + G R +EK+ +N R+V+HVA+ Y G GL +DL+Q+G
Sbjct: 131 LPEWAQAVGMSCKDLQSSIHIGRRCREKMARSNFRLVIHVARKYQGYGLDIEDLVQDGCC 190
Query: 361 GLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFY 420
GLMK+ EKF P GCRF +YAYWWIRQ I++++F HSR IRLPE+VY L K+ +A+
Sbjct: 191 GLMKTFEKFNPSKGCRFPTYAYWWIRQAIKKSIFKHSRLIRLPESVYARLKKVGKARLEC 250
Query: 421 NREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIET 480
EG PT + +AR+ G++++KL L + R P SMQ VW++ T+QEIT D I++
Sbjct: 251 ILEGE-QPTNQNVARRAGISIEKLAKLKAKTRKPRSMQDQVWSNDAVTFQEITEDPNIDS 309
Query: 481 PDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQL 540
PD+ V + +MR+ R L L+ RE+ I+ RFGI DG K+L IG ++GLSKER+RQL
Sbjct: 310 PDLVVDRIMMRQQVREFLGILSTREKEIVEHRFGIYDGEPKTLHVIGDMYGLSKERIRQL 369
Query: 541 ESRALDKLKQCLASHGLDAYANLLV 565
++RALDKLK+ +++ G D Y +LL
Sbjct: 370 QNRALDKLKRSVSTQGFDVYLDLLT 394
>I1QGT9_ORYGL (tr|I1QGT9) Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1
Length = 572
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 158/319 (49%), Positives = 222/319 (69%), Gaps = 1/319 (0%)
Query: 247 LDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWAD 306
L+ ++P ++FL ET + LT +EE L S+IQ L ++EE +L+ Q GREPT+AEWA+
Sbjct: 255 LEPDEPFKLFLRDRETTEFLTAKEERHLFSKIQILMKIEEAHRKLEVQCGREPTLAEWAE 314
Query: 307 GVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSV 366
VG+S LQ+ +R+G R +EK+ +N R+V+HVA+ Y G GL QDL+Q+G GLMK+
Sbjct: 315 AVGMSSKELQSSIRTGRRCREKMARSNFRLVIHVARKYEGYGLDIQDLVQDGCSGLMKTF 374
Query: 367 EKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNV 426
EKF P GCRF +YAYWWIRQ+I++++F +SR IRLPE+VY LL K+ +A+ EG
Sbjct: 375 EKFNPSKGCRFPTYAYWWIRQSIKKSIFKNSRLIRLPESVYALLRKVGKARMECIMEGE- 433
Query: 427 HPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVA 486
PT +AR+ G+T++KL L + R P SMQ VW+D+ T+QEIT D +E PD+ V
Sbjct: 434 QPTNANVARRAGITIEKLAKLRAKTRKPRSMQDHVWSDEGVTFQEITEDPNVEPPDLSVD 493
Query: 487 KQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALD 546
+ +MR+ R+ L L+PRE+ II RFGI DG K+L IG +FGLSKER+RQL++RAL+
Sbjct: 494 RMMMRQQVRDFLGILSPREKEIIEHRFGIHDGEPKTLHVIGDMFGLSKERIRQLQNRALE 553
Query: 547 KLKQCLASHGLDAYANLLV 565
KLK+ + G D Y +LL
Sbjct: 554 KLKRSASLQGFDVYFDLLT 572
>Q84LK8_ORYSJ (tr|Q84LK8) Os08g0242800 protein OS=Oryza sativa subsp. japonica
GN=SIG6 PE=2 SV=1
Length = 572
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 158/319 (49%), Positives = 222/319 (69%), Gaps = 1/319 (0%)
Query: 247 LDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWAD 306
L+ ++P ++FL ET + LT +EE L S+IQ L ++EE +L+ Q GREPT+AEWA+
Sbjct: 255 LEPDEPFKLFLRDRETTEFLTAKEERHLFSKIQILMKIEEAHRKLEVQCGREPTLAEWAE 314
Query: 307 GVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSV 366
VG+S LQ+ +R+G R +EK+ +N R+V+HVA+ Y G GL QDL+Q+G GLMK+
Sbjct: 315 AVGMSSKELQSSIRTGRRCREKMARSNFRLVIHVARKYEGYGLDIQDLVQDGCSGLMKTF 374
Query: 367 EKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNV 426
EKF P GCRF +YAYWWIRQ+I++++F +SR IRLPE+VY LL K+ +A+ EG
Sbjct: 375 EKFNPSKGCRFPTYAYWWIRQSIKKSIFKNSRLIRLPESVYALLRKVGKARMECIMEGE- 433
Query: 427 HPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVA 486
PT +AR+ G+T++KL L + R P SMQ VW+D+ T+QEIT D +E PD+ V
Sbjct: 434 QPTNANVARRAGITIEKLAKLRAKTRKPRSMQDHVWSDEGVTFQEITEDPNVEPPDLSVD 493
Query: 487 KQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALD 546
+ +MR+ R+ L L+PRE+ II RFGI DG K+L IG +FGLSKER+RQL++RAL+
Sbjct: 494 RMMMRQQVRDFLGILSPREKEIIEHRFGIHDGEPKTLHVIGDMFGLSKERIRQLQNRALE 553
Query: 547 KLKQCLASHGLDAYANLLV 565
KLK+ + G D Y +LL
Sbjct: 554 KLKRSASLQGFDVYFDLLT 572
>B4FJ30_MAIZE (tr|B4FJ30) SIGMA70-like transcription factor OS=Zea mays PE=2 SV=1
Length = 541
Score = 330 bits (846), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 161/325 (49%), Positives = 223/325 (68%), Gaps = 2/325 (0%)
Query: 242 KLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTM 301
K LD ++P R+FL ET + LT +EE Q+ SQIQNL +LE + LQ+Q GREPT+
Sbjct: 218 KFGRVLDPDEPFRLFLRDRETTEFLTAKEEKQMFSQIQNLMKLEGAQRNLQAQCGREPTV 277
Query: 302 AEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMG 361
EWA VG+SC LQ+ +R+G R +EK+ +N R+V+HVA+ Y G GL QDL+Q+G G
Sbjct: 278 EEWAQAVGMSCRELQSCVRTGRRCREKMARSNFRLVIHVARKYEGCGLDIQDLVQDGCCG 337
Query: 362 LMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYN 421
LMK+ EKF P GCRF +YAYWWIRQ+I++++F +SR IRLPE+VY LL K+ +A+
Sbjct: 338 LMKTFEKFNPSKGCRFPTYAYWWIRQSIKKSIFKNSRLIRLPESVYALLRKVGKARMECI 397
Query: 422 REGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETP 481
+G PT E +AR+ G+T++KL L + R SMQ VW+D TYQEIT D IE P
Sbjct: 398 MDGE-QPTNEVVARRAGITIEKLAKLRAKTRKVRSMQDRVWSDDGVTYQEITEDPNIEGP 456
Query: 482 DVYVAKQLMRRHARNLL-HTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQL 540
+V V + +MR+ R+ L L+PRE+ II RFGI DG K+L IG ++GLSKER+RQ+
Sbjct: 457 EVSVDRLMMRQQVRSFLTGILSPREKEIIEHRFGIHDGQPKTLHVIGDMYGLSKERIRQV 516
Query: 541 ESRALDKLKQCLASHGLDAYANLLV 565
+++ALDKL+ +++ G Y +LL
Sbjct: 517 QNKALDKLRNSISAQGFHVYFDLLT 541
>M1BY23_SOLTU (tr|M1BY23) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400021553 PE=4 SV=1
Length = 385
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 166/303 (54%), Positives = 214/303 (70%), Gaps = 6/303 (1%)
Query: 168 LIEADDDDNDDSLPFGLASTCFPDSSVRRNKIVRSTRLXXXXXXXXXXXXXXVLDDESYL 227
L+ D DDS ST D ++ + VRSTR +
Sbjct: 24 LLAEDSKLLDDSNFPNFLSTNLVDDKLKEQRTVRSTRFTERQSRKRGA------PKPTQQ 77
Query: 228 TRKSDVQGRLRVEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEV 287
++++ GR V +K+ E +D NDPLRMFLWGPETK+LLT +EES+LI +IQ +L+EV
Sbjct: 78 VQETNRSGRPDVRRKVNESIDLNDPLRMFLWGPETKQLLTAKEESELIVKIQISMKLQEV 137
Query: 288 KIRLQSQFGREPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGR 347
K +LQ QF EPT EWA+ G++ L++QL SG S+EKLI+ANLRMVVH+AK Y GR
Sbjct: 138 KHQLQIQFAHEPTSVEWAEAAGITSRELKSQLLSGKSSREKLINANLRMVVHIAKQYQGR 197
Query: 348 GLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVY 407
GL+ QDLLQEGSMGLMKSVEKFKPQAGCRF +YAYWWIRQ++R+A+F HSRTIRLPENVY
Sbjct: 198 GLNLQDLLQEGSMGLMKSVEKFKPQAGCRFPTYAYWWIRQSVRKAIFQHSRTIRLPENVY 257
Query: 408 TLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDT 467
LL K+ +AKK ++GN +PTKE++A G++V++L+ LLS R PLSMQQ+VW+DQDT
Sbjct: 258 ALLSKVKDAKKECIQQGNRYPTKEDIASCAGMSVERLQNLLSNVRTPLSMQQSVWSDQDT 317
Query: 468 TYQ 470
T+Q
Sbjct: 318 TFQ 320
>M8A8U2_TRIUA (tr|M8A8U2) RNA polymerase sigma factor rpoD OS=Triticum urartu
GN=TRIUR3_06257 PE=4 SV=1
Length = 553
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 161/331 (48%), Positives = 221/331 (66%), Gaps = 7/331 (2%)
Query: 241 KKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQ------NLFRLEEVKIRLQSQ 294
KK L ++P R+FL ET + LT +EE L SQIQ NL +LEE + RL++Q
Sbjct: 221 KKYGRVLGPDEPFRLFLRDRETTEFLTAKEERHLFSQIQACSFFLNLMKLEEAQRRLEAQ 280
Query: 295 FGREPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDL 354
GREPT+ EWA VG+SC LQ+ + G R +EK+ +N R+V+HVA+ Y G GL +DL
Sbjct: 281 CGREPTLPEWAQAVGMSCKELQSSIHIGRRCREKMARSNFRLVIHVARKYQGYGLDIEDL 340
Query: 355 LQEGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLI 414
+Q+G GLMK+ EKF P GCRF +YAYWWIRQ I++++F HSR IRLPE+VY L K+
Sbjct: 341 VQDGCCGLMKTFEKFNPSKGCRFPTYAYWWIRQAIKKSIFKHSRLIRLPESVYARLKKVG 400
Query: 415 EAKKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITA 474
+A+ EG PT + +AR+ G+T++KL L + R P SMQ VW++ T+QEIT
Sbjct: 401 KARLECILEGE-QPTNQNVARRAGITIEKLAKLKAKTRKPRSMQDQVWSNDAVTFQEITE 459
Query: 475 DTAIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSK 534
D I+ PD+ V + +MR+ R L L+ RE+ II RFGI DG K+L IG ++GLSK
Sbjct: 460 DPNIDPPDLVVDRIMMRQQVREFLGILSTREKEIIEHRFGIYDGEPKTLHVIGDMYGLSK 519
Query: 535 ERVRQLESRALDKLKQCLASHGLDAYANLLV 565
ER+RQL++RALDKLK+ +++ G D Y +LL
Sbjct: 520 ERIRQLQNRALDKLKRSVSTQGFDVYLDLLT 550
>Q9ZPL0_MAIZE (tr|Q9ZPL0) Sigma factor SIG6 OS=Zea mays GN=sig6 PE=2 SV=1
Length = 541
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 160/325 (49%), Positives = 220/325 (67%), Gaps = 2/325 (0%)
Query: 242 KLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTM 301
K L Q R+FL ET + LT +EE Q+ SQIQNL +LE + LQ+Q GREPT+
Sbjct: 218 KFGRVLIQTSLFRLFLRDRETTEFLTAKEEKQMFSQIQNLMKLEGAQRNLQAQCGREPTV 277
Query: 302 AEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMG 361
EWA VG+SC LQ+ +R+G R +EK+ +N R+V+HVA+ Y G GL QDL+Q+G G
Sbjct: 278 EEWAQAVGMSCRELQSCVRTGRRCREKMARSNFRLVIHVARKYEGCGLDIQDLVQDGCCG 337
Query: 362 LMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYN 421
LMK+ EKF P GCRF +YAYWWIRQ+I++++F +SR IRLPE+VY LL K+ +A+
Sbjct: 338 LMKTFEKFNPSKGCRFPTYAYWWIRQSIKKSIFKNSRLIRLPESVYALLRKVGKARMECI 397
Query: 422 REGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETP 481
+G PT E +AR+ G+T++KL L + R SMQ VW+D TYQEIT D IE P
Sbjct: 398 MDGE-QPTNEVVARRAGITIEKLAKLRAKTRKVRSMQDRVWSDDGVTYQEITEDPNIEGP 456
Query: 482 DVYVAKQLMRRHARNLL-HTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQL 540
+V V + +MR+ R+ L L+PRE+ II RFGI DG K+L IG ++GLSKER+RQ+
Sbjct: 457 EVSVDRLMMRQQVRSFLTGILSPREKEIIEHRFGIHDGQPKTLHVIGDMYGLSKERIRQV 516
Query: 541 ESRALDKLKQCLASHGLDAYANLLV 565
+++ALDKL+ +++ G Y +LL
Sbjct: 517 QNKALDKLRNSISAQGFHVYFDLLT 541
>B8BC85_ORYSI (tr|B8BC85) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_28384 PE=4 SV=1
Length = 537
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 158/335 (47%), Positives = 222/335 (66%), Gaps = 17/335 (5%)
Query: 247 LDQNDPLRMFLWGPETKKLLTFEEESQLISQIQN----------------LFRLEEVKIR 290
L+ ++P ++FL ET + LT +EE L S+IQ L ++EE +
Sbjct: 204 LEPDEPFKLFLRDRETTEFLTAKEERHLFSKIQAKPYFYPVIFIFRTAQILMKIEEAHRK 263
Query: 291 LQSQFGREPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLS 350
L+ Q GREPT+AEWA+ VG+S LQ+ +R+G R +EK+ +N R+V+HVA+ Y G GL
Sbjct: 264 LEVQCGREPTLAEWAEAVGMSSKELQSSIRTGRRCREKMARSNFRLVIHVARKYEGYGLD 323
Query: 351 FQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLL 410
QDL+Q+G GLMK+ EKF P GCRF +YAYWWIRQ+I++++F +SR IRLPE+VY LL
Sbjct: 324 IQDLVQDGCSGLMKTFEKFNPSKGCRFPTYAYWWIRQSIKKSIFKNSRLIRLPESVYALL 383
Query: 411 GKLIEAKKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQ 470
K+ +A+ EG PT +AR+ G+T++KL L + R P SMQ VW+D+ T+Q
Sbjct: 384 RKVGKARMECIMEGE-QPTNANVARRAGITIEKLAKLRAKTRKPRSMQDHVWSDEGVTFQ 442
Query: 471 EITADTAIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVF 530
EIT D +E PD+ V + +MR+ R+ L L+PRE+ II RFGI DG K+L IG +F
Sbjct: 443 EITEDPNVEPPDLSVDRMMMRQQVRDFLGILSPREKEIIEHRFGIHDGEPKTLHVIGDMF 502
Query: 531 GLSKERVRQLESRALDKLKQCLASHGLDAYANLLV 565
GLSKER+RQL++RAL+KLK+ + G D Y +LL
Sbjct: 503 GLSKERIRQLQNRALEKLKRSASLQGFDVYFDLLT 537
>A3BR19_ORYSJ (tr|A3BR19) Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=OsJ_26557 PE=4 SV=1
Length = 497
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 158/335 (47%), Positives = 222/335 (66%), Gaps = 17/335 (5%)
Query: 247 LDQNDPLRMFLWGPETKKLLTFEEESQLISQIQN----------------LFRLEEVKIR 290
L+ ++P ++FL ET + LT +EE L S+IQ L ++EE +
Sbjct: 164 LEPDEPFKLFLRDRETTEFLTAKEERHLFSKIQAKPYFYPVIFIFRTAQILMKIEEAHRK 223
Query: 291 LQSQFGREPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLS 350
L+ Q GREPT+AEWA+ VG+S LQ+ +R+G R +EK+ +N R+V+HVA+ Y G GL
Sbjct: 224 LEVQCGREPTLAEWAEAVGMSSKELQSSIRTGRRCREKMARSNFRLVIHVARKYEGYGLD 283
Query: 351 FQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLL 410
QDL+Q+G GLMK+ EKF P GCRF +YAYWWIRQ+I++++F +SR IRLPE+VY LL
Sbjct: 284 IQDLVQDGCSGLMKTFEKFNPSKGCRFPTYAYWWIRQSIKKSIFKNSRLIRLPESVYALL 343
Query: 411 GKLIEAKKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQ 470
K+ +A+ EG PT +AR+ G+T++KL L + R P SMQ VW+D+ T+Q
Sbjct: 344 RKVGKARMECIMEGE-QPTNANVARRAGITIEKLAKLRAKTRKPRSMQDHVWSDEGVTFQ 402
Query: 471 EITADTAIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVF 530
EIT D +E PD+ V + +MR+ R+ L L+PRE+ II RFGI DG K+L IG +F
Sbjct: 403 EITEDPNVEPPDLSVDRMMMRQQVRDFLGILSPREKEIIEHRFGIHDGEPKTLHVIGDMF 462
Query: 531 GLSKERVRQLESRALDKLKQCLASHGLDAYANLLV 565
GLSKER+RQL++RAL+KLK+ + G D Y +LL
Sbjct: 463 GLSKERIRQLQNRALEKLKRSASLQGFDVYFDLLT 497
>M8BZZ6_AEGTA (tr|M8BZZ6) RNA polymerase sigma factor rpoD OS=Aegilops tauschii
GN=F775_07378 PE=4 SV=1
Length = 551
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 142/287 (49%), Positives = 197/287 (68%), Gaps = 1/287 (0%)
Query: 279 QNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVV 338
+NL +LEE + RL++Q GREPT+ EWA VG+SC LQ+ + G R +EK+ +N R+V+
Sbjct: 263 RNLMKLEEAQRRLEAQCGREPTLPEWAQAVGMSCKELQSSIHMGRRCREKMARSNFRLVI 322
Query: 339 HVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSR 398
HVA+ Y G GL +DL+Q+G GLMK+ EKF P GCRF +YAYWWIRQ I++++F HSR
Sbjct: 323 HVARKYQGYGLDIEDLVQDGCCGLMKTFEKFNPSKGCRFPTYAYWWIRQAIKKSIFKHSR 382
Query: 399 TIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQ 458
IRLPE+VY L K+ +A+ EG PT + +AR+ G+T++KL L + R P SMQ
Sbjct: 383 LIRLPESVYARLKKVGKARLECILEGE-QPTNQNVARRAGITIEKLAKLKAKTRKPRSMQ 441
Query: 459 QTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDG 518
VW++ T+QEIT D I+ PD+ V + +MR+ R L L RE+ II RFGI DG
Sbjct: 442 DQVWSNDAVTFQEITEDPNIDPPDLVVDRIMMRQQVREFLGILTTREKEIIEHRFGIYDG 501
Query: 519 YEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGLDAYANLLV 565
K+L IG ++GLSKER+RQL++RALDKLK+ +++ G Y +LL
Sbjct: 502 EPKTLHVIGDMYGLSKERIRQLQNRALDKLKRSVSTQGFHVYLDLLT 548
>Q9AYR7_9BRYO (tr|Q9AYR7) PpSIG2 OS=Physcomitrella patens GN=Sig2 PE=2 SV=1
Length = 579
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 135/303 (44%), Positives = 213/303 (70%)
Query: 248 DQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADG 307
D +DP+R +L KLLT EE L QIQ+L +LE +K L+ + GR T+ EW+
Sbjct: 259 DPSDPVRAYLRDIGRTKLLTAREEVDLSHQIQDLLKLENIKSNLEREIGRNATIGEWSRA 318
Query: 308 VGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVE 367
VG+ A + +L+ G +K+K++++NLR+VV +AKNY GRG++ QDL+QEGSMGL++ E
Sbjct: 319 VGMEQNAFEARLKKGRFAKDKMVNSNLRLVVSIAKNYQGRGMTLQDLIQEGSMGLVRGAE 378
Query: 368 KFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVH 427
KF P G +F++YA+WWIRQ + R++ SRTIRLP ++Y ++ ++ +AK+ +E
Sbjct: 379 KFDPTKGFKFSTYAHWWIRQAVTRSIADQSRTIRLPIHLYEVISRINKAKRMLVQEHGRE 438
Query: 428 PTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAK 487
EE+A +G+TV+KL+ ++ +A+ P SM++ + D DTT E+ ADT +++P+ + K
Sbjct: 439 ARNEEVAELVGLTVEKLKSVVKSAKAPGSMERPIGKDGDTTLGELVADTDVDSPEDAIVK 498
Query: 488 QLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDK 547
QLMR+ +L TLNPRER ++RLRFG++DG K+L EIG +F +++ER+RQ+E++A+ K
Sbjct: 499 QLMRQDIEGVLRTLNPREREVLRLRFGLDDGRSKTLEEIGQIFKVTRERIRQIEAKAMRK 558
Query: 548 LKQ 550
L+Q
Sbjct: 559 LRQ 561
>E1C9M6_PHYPA (tr|E1C9M6) Plastid sigma facor SIG2 OS=Physcomitrella patens
subsp. patens GN=PpSig2 PE=4 SV=1
Length = 579
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 135/303 (44%), Positives = 213/303 (70%)
Query: 248 DQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADG 307
D +DP+R +L KLLT EE L QIQ+L +LE +K L+ + GR T+ EW+
Sbjct: 259 DPSDPVRAYLRDIGRTKLLTAREEVDLSHQIQDLLKLENIKSNLEREIGRNATIGEWSRA 318
Query: 308 VGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVE 367
VG+ A + +L+ G +K+K++++NLR+VV +AKNY GRG++ QDL+QEGSMGL++ E
Sbjct: 319 VGMEQNAFEARLKKGRFAKDKMVNSNLRLVVSIAKNYQGRGMTLQDLIQEGSMGLVRGAE 378
Query: 368 KFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVH 427
KF P G +F++YA+WWIRQ + R++ SRTIRLP ++Y ++ ++ +AK+ +E
Sbjct: 379 KFDPTKGFKFSTYAHWWIRQAVTRSIADQSRTIRLPIHLYEVISRINKAKRMLVQEHGRE 438
Query: 428 PTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAK 487
EE+A +G+TV+KL+ ++ +A+ P SM++ + D DTT E+ ADT +++P+ + K
Sbjct: 439 ARNEEVAELVGLTVEKLKSVVKSAKAPGSMERPIGKDGDTTLGELVADTDVDSPEDAIVK 498
Query: 488 QLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDK 547
QLMR+ +L TLNPRER ++RLRFG++DG K+L EIG +F +++ER+RQ+E++A+ K
Sbjct: 499 QLMRQDIEGVLRTLNPREREVLRLRFGLDDGRSKTLEEIGQIFKVTRERIRQIEAKAMRK 558
Query: 548 LKQ 550
L+Q
Sbjct: 559 LRQ 561
>K0ISZ8_MARPO (tr|K0ISZ8) Plastid RNA polymerase sigma factor 2 OS=Marchantia
polymorpha GN=Mpsig2 PE=2 SV=1
Length = 615
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/323 (43%), Positives = 221/323 (68%)
Query: 241 KKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPT 300
KK + D DP+R +L KLLT EE +L IQ+L R+E VK L+ Q GREPT
Sbjct: 293 KKSQPAYDPQDPVRAYLRDIGKTKLLTSSEEIELAEGIQDLLRVESVKNDLREQMGREPT 352
Query: 301 MAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSM 360
+ EWA VG ++L+++++SG K++++++NLR+VV +AK Y GRG++ QDL+QEGSM
Sbjct: 353 LMEWAKAVGTERHSLESRIKSGQACKDRMVNSNLRLVVSIAKRYQGRGMTIQDLIQEGSM 412
Query: 361 GLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFY 420
GL++ EKF G +F++YA+WWIRQ I RA+ SRTIRLP +VY LL ++ +AK
Sbjct: 413 GLIRGAEKFDHTRGFKFSTYAHWWIRQAITRAIADQSRTIRLPVHVYELLSRITKAKSML 472
Query: 421 NREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIET 480
E P EE+A +G++++KL++++ +AR P SM+ V + DTT E+ D I++
Sbjct: 473 AAEHGRAPRDEEVAELVGLSIEKLKMVIKSARSPKSMEFPVGKNNDTTLGEVIPDKDIDS 532
Query: 481 PDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQL 540
P+ ++K+L+++ +LHTL+PRER ++RLR+G++DG ++L EIG VF +++ER+RQ+
Sbjct: 533 PEEAISKRLLKQDLDVVLHTLSPRERDVLRLRYGLDDGRMRTLEEIGNVFKVTRERIRQI 592
Query: 541 ESRALDKLKQCLASHGLDAYANL 563
E++AL KL+Q + L Y +L
Sbjct: 593 EAKALRKLRQPSRNTALREYLDL 615
>A9RTR4_PHYPA (tr|A9RTR4) Uncharacterized protein OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_160930 PE=4 SV=1
Length = 591
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 210/303 (69%), Gaps = 2/303 (0%)
Query: 250 NDPLRMFLWGPETKKLLTFEEESQLISQIQ--NLFRLEEVKIRLQSQFGREPTMAEWADG 307
DP+R +L KLLT EE L +IQ +L LE+VK LQ + GREP++ EW+
Sbjct: 273 TDPVRAYLRDIGKTKLLTASEEVALSRKIQARDLLVLEKVKSDLQREIGREPSIGEWSRA 332
Query: 308 VGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVE 367
VG+ A + +++ G SK+K++++NLR+VV + KNY GRG++ DL+QEGSMGL++ E
Sbjct: 333 VGMEQNAFELRVKEGRYSKDKMVNSNLRLVVSIVKNYQGRGMTLPDLIQEGSMGLIRGAE 392
Query: 368 KFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVH 427
KF P G +F++YA+WWIRQ + RA+ SR IRLP ++Y ++ ++ +AKK +E
Sbjct: 393 KFDPDKGFKFSTYAHWWIRQAVTRAIADQSRIIRLPIHLYEVISRINKAKKMLIQEHGRQ 452
Query: 428 PTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAK 487
P EE+A +G++V+KL+ ++ +A+ P SM + + ++D + E+ AD +E+P+ + +
Sbjct: 453 PRDEEVAELVGMSVEKLKFIVKSAKTPSSMDRLIGKEKDQSIGEMIADKDVESPEDDLIR 512
Query: 488 QLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDK 547
Q++++ +L TLNPRER ++RLRFG++DG ++L EIGT+F +++ER+RQ+E++A+ K
Sbjct: 513 QVLKQDVDGVLCTLNPREREVLRLRFGLDDGQSRTLEEIGTLFKVTRERIRQIEAKAMRK 572
Query: 548 LKQ 550
L+Q
Sbjct: 573 LRQ 575
>K8GQ72_9CYAN (tr|K8GQ72) RNA polymerase sigma factor OS=Oscillatoriales
cyanobacterium JSC-12 GN=OsccyDRAFT_1085 PE=3 SV=1
Length = 382
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 129/315 (40%), Positives = 210/315 (66%), Gaps = 3/315 (0%)
Query: 235 GRLRVEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQ 294
GR R + K K + D +R++L +LL +EE +L +I +L LE ++ LQ Q
Sbjct: 58 GRRRTQAKKKHYTE--DSIRLYLQEIGRIRLLRADEEIELARKIADLLELERIRESLQQQ 115
Query: 295 FGREPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDL 354
R P AEWA+ V ++ A + +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL
Sbjct: 116 LDRTPQDAEWANAVNMTLPAFRHRLHLGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDL 175
Query: 355 LQEGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLI 414
+QEGS+GL+++ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++
Sbjct: 176 IQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIK 235
Query: 415 EAKKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITA 474
+ K ++E PT+EE+A ++ +T++KL + +A++P+S++ + ++D+ +
Sbjct: 236 KTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIE 295
Query: 475 DTAIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSK 534
ETP+ VAK L+R N+L TL+PRER ++RLR+G++DG K+L EIG +F +++
Sbjct: 296 SDG-ETPEDQVAKNLLREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTR 354
Query: 535 ERVRQLESRALDKLK 549
ER+RQ+E++AL KL+
Sbjct: 355 ERIRQIEAKALRKLR 369
>B7KDV7_CYAP7 (tr|B7KDV7) RNA polymerase sigma factor OS=Cyanothece sp. (strain
PCC 7424) GN=PCC7424_1979 PE=3 SV=1
Length = 376
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 219/340 (64%), Gaps = 6/340 (1%)
Query: 222 DDESYLTRKSDVQGRLRVEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNL 281
DD S TRK R KK D +R++L +LL EEE +L +I +L
Sbjct: 40 DDNSKKTRKVTATRRRDAGKKKPYT---EDSIRIYLQEIGRIRLLRAEEEIELARKIADL 96
Query: 282 FRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVA 341
LE ++ +L+ GR P+ EWA+ VG+ A Q +L G R+K+K++ +NLR+VV +A
Sbjct: 97 LELERLREKLRRSLGRYPSDKEWAEQVGMELPAFQRRLYLGRRAKDKMVQSNLRLVVSIA 156
Query: 342 KNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIR 401
K Y+ RGLSFQDL+QEGS+GL+++ EKF + G +F++YA WWIRQ I RA+ SRTIR
Sbjct: 157 KKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIR 216
Query: 402 LPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTV 461
LP ++Y + ++ + K ++E PT+EE+A ++ +T++KL + +A++P+S++ +
Sbjct: 217 LPVHLYETISRIKKTTKILSQEMRRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPI 276
Query: 462 WTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYE 520
++D+ + I AD ETP+ V+K L+R N+L TL+PRER ++RLR+G++DG
Sbjct: 277 GKEEDSRLGDFIEADG--ETPEDEVSKNLLREDLENVLDTLSPRERDVLRLRYGLDDGRM 334
Query: 521 KSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGLDAY 560
K+L EIG +F +++ER+RQ+E++AL KL+ + L Y
Sbjct: 335 KTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSILKEY 374
>A9RTR6_PHYPA (tr|A9RTR6) Uncharacterized protein OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_178031 PE=4 SV=1
Length = 583
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 119/309 (38%), Positives = 207/309 (66%)
Query: 241 KKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPT 300
KKL+ +DP+R +L + KLL+ EE L +IQ++ +LE+++ LQ GREPT
Sbjct: 259 KKLQIMRTPSDPIRSYLRDIKRTKLLSASEEVALSRKIQDILKLEKIRAELQRDIGREPT 318
Query: 301 MAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSM 360
++EW+ V L +L+ +++ G +K+KL+++NLR+VV + KNY GRG++ DL+QEGS+
Sbjct: 319 LSEWSQAVSLDQTSLELRVKEGRSAKDKLVNSNLRLVVSIVKNYQGRGMTLPDLIQEGSL 378
Query: 361 GLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFY 420
GL++ EKF P+ G +F++YA WWIRQ + RA+ SR IRLP ++Y ++ ++ +AK
Sbjct: 379 GLIRGAEKFDPEMGYKFSTYATWWIRQAVTRAIADQSRIIRLPVHIYEVISRINKAKMTI 438
Query: 421 NREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIET 480
++E P EE+A +G++V+KL ++ +AR P SM + + D + + E+ AD + +
Sbjct: 439 SQELGRQPRDEEVAAMVGMSVEKLLFIVKSARPPTSMDRPIGKDGEQSLGEMVADKGVGS 498
Query: 481 PDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQL 540
P+ + Q++++ ++L +LNP ER ++RLRFG+ +L ++G +F +++ER+RQ+
Sbjct: 499 PEDDIMTQVLKQDIEDVLRSLNPMEREVLRLRFGLSGAQSMTLKDLGIIFKVTRERIRQI 558
Query: 541 ESRALDKLK 549
E++AL KL+
Sbjct: 559 EAKALRKLR 567
>B8LQB0_PICSI (tr|B8LQB0) Putative uncharacterized protein OS=Picea sitchensis
PE=2 SV=1
Length = 495
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 130/315 (41%), Positives = 205/315 (65%), Gaps = 3/315 (0%)
Query: 250 NDPLRMFL-WGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGV 308
+D +R+ W + +LLT EE +L IQ+L +L+ ++ + + + G+EPT+A+WA+ +
Sbjct: 183 SDSIRLLRDWS--SSRLLTASEEVELSRGIQDLIKLDRIRAKYKEKTGKEPTLAQWAEVI 240
Query: 309 GLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEK 368
G+ L+ +L G S +K+I+ NLR+V+ VAKNY RGLS QDL+Q GSMGLM+S EK
Sbjct: 241 GVDQKTLKMRLEVGRDSFDKIINCNLRLVISVAKNYQNRGLSLQDLIQAGSMGLMRSAEK 300
Query: 369 FKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHP 428
F G +F++YAYWWIRQ+I +AL SRTIRLP ++ + ++ A + +E P
Sbjct: 301 FDYSRGFKFSTYAYWWIRQSITKALTEQSRTIRLPVHIVESMTRIRTAWRLLYQEHKRDP 360
Query: 429 TKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQ 488
TKEE+A G+++ +L + +R+P S+ + V D D + EI ADT E+ + V+K+
Sbjct: 361 TKEEVAEVAGISMTRLRHVTRCSRVPTSLDRCVGKDMDEKFSEIVADTNSESTETIVSKE 420
Query: 489 LMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKL 548
L ++ +L TL RE++++RLR+G++DG KSL E+G F LS+ERVRQ+E +A+ KL
Sbjct: 421 LFKKDLDRVLDTLTAREKQVVRLRYGLDDGRMKSLHEVGENFSLSRERVRQIEMKAMRKL 480
Query: 549 KQCLASHGLDAYANL 563
+Q + L Y ++
Sbjct: 481 RQNHRTQHLKHYLDI 495
>F5UG89_9CYAN (tr|F5UG89) RNA polymerase sigma factor OS=Microcoleus vaginatus
FGP-2 GN=MicvaDRAFT_3216 PE=3 SV=1
Length = 388
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 131/340 (38%), Positives = 219/340 (64%), Gaps = 1/340 (0%)
Query: 221 LDDESYLTRKSDVQGRLRVEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQN 280
LD +S KS + R + K+ D +R++L +LL +EE +L +I +
Sbjct: 48 LDSQSEEDPKSGKGAKARRRAQAKKKHYTEDSIRLYLQEIGRIRLLRADEEIELARKIAD 107
Query: 281 LFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHV 340
L LE V+ +L ++ REP +EWA+ V ++ A + +L G R+KEK++ +NLR+VV +
Sbjct: 108 LLELERVREQLLEEYNREPKDSEWANAVDMALPAFRHRLHVGRRAKEKMVQSNLRLVVSI 167
Query: 341 AKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTI 400
AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +F++YA WWIRQ I RA+ SRTI
Sbjct: 168 AKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTI 227
Query: 401 RLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQT 460
RLP ++Y + ++ + K ++E PT+EE+A ++ +T++KL + +A++P+S++
Sbjct: 228 RLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETP 287
Query: 461 VWTDQDTTYQEITADTAIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYE 520
+ ++D+ + ETP+ V+K L+R ++L TL+PRER ++RLR+G++DG
Sbjct: 288 IGKEEDSRLGDFIESDG-ETPEDQVSKNLLREDLESVLDTLSPRERDVLRLRYGLDDGRM 346
Query: 521 KSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGLDAY 560
K+L EIG +F +++ER+RQ+E++AL KL+ + L Y
Sbjct: 347 KTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSILKEY 386
>B8LLW6_PICSI (tr|B8LLW6) Putative uncharacterized protein OS=Picea sitchensis
PE=2 SV=1
Length = 592
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 130/315 (41%), Positives = 205/315 (65%), Gaps = 3/315 (0%)
Query: 250 NDPLRMFL-WGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGV 308
+D +R+ W + +LLT EE +L IQ+L +L+ ++ + + + G+EPT+A+WA+ +
Sbjct: 280 SDSIRLLRDWS--SSRLLTASEEVELSRGIQDLIKLDRIRAKYKEKTGKEPTLAQWAEVI 337
Query: 309 GLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEK 368
G+ L+ +L G S +K+I+ NLR+V+ VAKNY RGLS QDL+Q GSMGLM+S EK
Sbjct: 338 GVDQKTLKMRLEVGRDSFDKIINCNLRLVISVAKNYQNRGLSLQDLIQAGSMGLMRSAEK 397
Query: 369 FKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHP 428
F G +F++YAYWWIRQ+I +AL SRTIRLP ++ + ++ A + +E P
Sbjct: 398 FDYSRGFKFSTYAYWWIRQSITKALTEQSRTIRLPVHIVESMTRIRTAWRLLYQEHKRDP 457
Query: 429 TKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQ 488
TKEE+A G+++ +L + +R+P S+ + V D D + EI ADT E+ + V+K+
Sbjct: 458 TKEEVAEVAGISMTRLRHVTRCSRVPTSLDRCVGKDMDEKFSEIVADTNSESTETIVSKE 517
Query: 489 LMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKL 548
L ++ +L TL RE++++RLR+G++DG KSL E+G F LS+ERVRQ+E +A+ KL
Sbjct: 518 LFKKDLDRVLDTLTAREKQVVRLRYGLDDGRMKSLHEVGENFSLSRERVRQIEMKAMRKL 577
Query: 549 KQCLASHGLDAYANL 563
+Q + L Y ++
Sbjct: 578 RQNHRTQHLKHYLDI 592
>E0UHZ3_CYAP2 (tr|E0UHZ3) RNA polymerase sigma factor OS=Cyanothece sp. (strain
PCC 7822) GN=Cyan7822_2551 PE=3 SV=1
Length = 377
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 129/311 (41%), Positives = 209/311 (67%), Gaps = 3/311 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL EEE +L +I +L LE ++ +L+ GR P+ EWA VG+
Sbjct: 67 DSIRIYLQEIGRIRLLRAEEEIELARKIADLLELERLREKLRRNLGRYPSDKEWAQQVGM 126
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
A Q +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 127 ELPAFQRRLYLGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 186
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 187 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMRRKPTE 246
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQL 489
EE+A ++ +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K L
Sbjct: 247 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKNL 304
Query: 490 MRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
+R N+L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 305 LREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLR 364
Query: 550 QCLASHGLDAY 560
+ L Y
Sbjct: 365 HPNRNSILKEY 375
>K9ZHC6_ANACC (tr|K9ZHC6) RNA polymerase sigma factor OS=Anabaena cylindrica
(strain ATCC 27899 / PCC 7122) GN=Anacy_2718 PE=3 SV=1
Length = 392
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 125/310 (40%), Positives = 204/310 (65%), Gaps = 1/310 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL +EE +L +I +L LE V+ RLQ Q REP EWA+ V L
Sbjct: 82 DSIRLYLQEIGRIRLLRADEEIELARKIADLLELERVRDRLQDQLEREPQFKEWAEAVEL 141
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
+ +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 142 PLPTFRYRLHVGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 201
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 202 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTE 261
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+ V+K L+
Sbjct: 262 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDQVSKNLL 320
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R +L +L+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 321 REDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 380
Query: 551 CLASHGLDAY 560
+ L Y
Sbjct: 381 PNRNSVLKEY 390
>G6FUP1_9CYAN (tr|G6FUP1) RNA polymerase sigma factor OS=Fischerella sp. JSC-11
GN=FJSC11DRAFT_2588 PE=3 SV=1
Length = 393
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/347 (38%), Positives = 219/347 (63%), Gaps = 12/347 (3%)
Query: 223 DESYLTRKSD---------VQGRLRVEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQ 273
DE +L +SD + R R + K K + D +R++L +LL +EE +
Sbjct: 48 DEEFLEPQSDEDDAKSGKAAKSRRRSQNKKKHYTE--DSIRLYLQEIGRIRLLRADEEIE 105
Query: 274 LISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHAN 333
L +I +L LE V+ RLQ Q REP +EWA+ V L + +L G R+K+K++ +N
Sbjct: 106 LARKIADLLELERVRDRLQQQLEREPQYSEWAEAVQLPLPQFRHRLHVGRRAKDKMVQSN 165
Query: 334 LRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRAL 393
LR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +F++YA WWIRQ I RA+
Sbjct: 166 LRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAI 225
Query: 394 FLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARI 453
SRTIRLP ++Y + ++ + K ++E PT+EE+A ++ +T++KL + +A++
Sbjct: 226 ADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQL 285
Query: 454 PLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRF 513
P+S++ + ++D+ + ETP+ V+K L+R +L +L+PRER ++RLR+
Sbjct: 286 PISLETPIGKEEDSRLGDFIESDG-ETPEDQVSKNLLREDLEKVLDSLSPRERDVLRLRY 344
Query: 514 GIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGLDAY 560
G++DG K+L EIG +F +++ER+RQ+E++AL KL+ + L Y
Sbjct: 345 GLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSVLKEY 391
>A0ZJC3_NODSP (tr|A0ZJC3) RNA polymerase sigma factor OS=Nodularia spumigena
CCY9414 GN=N9414_22328 PE=3 SV=1
Length = 391
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/310 (40%), Positives = 205/310 (66%), Gaps = 1/310 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL +EE +L +I +L LE V+ RLQ Q REP EWA+ V +
Sbjct: 81 DSIRLYLQEIGRIRLLRADEEIELARKIADLLELERVRDRLQEQLEREPEYREWAEAVQI 140
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
A + +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 141 PLPAFRYRLHIGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 200
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 201 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTE 260
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+ V+K L+
Sbjct: 261 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDQVSKNLL 319
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R +L +L+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 320 REDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 379
Query: 551 CLASHGLDAY 560
+ L Y
Sbjct: 380 PNRNSVLKEY 389
>K9VRX0_9CYAN (tr|K9VRX0) RNA polymerase sigma factor OS=Oscillatoria
nigro-viridis PCC 7112 GN=Osc7112_5754 PE=3 SV=1
Length = 388
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/329 (39%), Positives = 216/329 (65%), Gaps = 1/329 (0%)
Query: 221 LDDESYLTRKSDVQGRLRVEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQN 280
LD +S KS + R + K+ D +R++L +LL +EE +L +I +
Sbjct: 48 LDSQSEDDPKSGKGAKARRRAQAKKKHYTEDSIRLYLQEIGRIRLLRADEEIELARKIAD 107
Query: 281 LFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHV 340
L LE V+ +L ++ REP +EWA+ V ++ A + +L G R+KEK++ +NLR+VV +
Sbjct: 108 LLELERVREQLLEEYNREPKDSEWANAVEMALPAFRHRLHVGRRAKEKMVQSNLRLVVSI 167
Query: 341 AKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTI 400
AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +F++YA WWIRQ I RA+ SRTI
Sbjct: 168 AKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTI 227
Query: 401 RLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQT 460
RLP ++Y + ++ + K ++E PT+EE+A ++ +T++KL + +A++P+S++
Sbjct: 228 RLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETP 287
Query: 461 VWTDQDTTYQEITADTAIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYE 520
+ ++D+ + ETP+ V+K L+R ++L TL+PRER ++RLR+G++DG
Sbjct: 288 IGKEEDSRLGDFIESDG-ETPEDQVSKNLLREDLESVLDTLSPRERDVLRLRYGLDDGRM 346
Query: 521 KSLSEIGTVFGLSKERVRQLESRALDKLK 549
K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 347 KTLEEIGQIFNVTRERIRQIEAKALRKLR 375
>C7QR23_CYAP0 (tr|C7QR23) RNA polymerase sigma factor OS=Cyanothece sp. (strain
PCC 8802) GN=Cyan8802_0150 PE=3 SV=1
Length = 379
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/311 (40%), Positives = 208/311 (66%), Gaps = 3/311 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL EEE +L +I +L LE ++ ++ GR PT EW+ + +
Sbjct: 69 DSIRIYLQEIGRIRLLRAEEEIELARKIADLLELERIREKMTEHMGRFPTDLEWSQAINM 128
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
+A Q +L G ++K+K++H+NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 129 EWHAFQRRLYLGRKAKDKMVHSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 188
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 189 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMRRKPTE 248
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQL 489
EE+A ++ +T++KL + +A++P+S++ + ++D+ + I AD E P+ V+K L
Sbjct: 249 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ENPEDEVSKNL 306
Query: 490 MRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
+R N+L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 307 LREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLR 366
Query: 550 QCLASHGLDAY 560
+ L Y
Sbjct: 367 HPNRNSILKEY 377
>B7K1V2_CYAP8 (tr|B7K1V2) RNA polymerase sigma factor OS=Cyanothece sp. (strain
PCC 8801) GN=PCC8801_0154 PE=3 SV=1
Length = 379
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/311 (40%), Positives = 208/311 (66%), Gaps = 3/311 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL EEE +L +I +L LE ++ ++ GR PT EW+ + +
Sbjct: 69 DSIRIYLQEIGRIRLLRAEEEIELARKIADLLELERIREKMTEHMGRFPTDLEWSQAINM 128
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
+A Q +L G ++K+K++H+NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 129 EWHAFQRRLYLGRKAKDKMVHSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 188
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 189 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMRRKPTE 248
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQL 489
EE+A ++ +T++KL + +A++P+S++ + ++D+ + I AD E P+ V+K L
Sbjct: 249 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ENPEDEVSKNL 306
Query: 490 MRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
+R N+L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 307 LREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLR 366
Query: 550 QCLASHGLDAY 560
+ L Y
Sbjct: 367 HPNRNSILKEY 377
>F4XPJ0_9CYAN (tr|F4XPJ0) RNA polymerase sigma factor OS=Moorea producens 3L
GN=LYNGBM3L_34960 PE=3 SV=1
Length = 373
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/311 (41%), Positives = 207/311 (66%), Gaps = 3/311 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL +EE +L +I +L LE V+ RL Q REP EWA V +
Sbjct: 63 DSIRLYLQEIGRIRLLRADEEIELARKIADLLELERVRERLSEQLEREPGDREWATEVDM 122
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
A + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 123 ELPAFRYRLHVGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 182
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 183 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTE 242
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQL 489
EE+A ++ +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K L
Sbjct: 243 EEIADRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDQVSKNL 300
Query: 490 MRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
+R ++L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 301 LREDLESVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLR 360
Query: 550 QCLASHGLDAY 560
+ L Y
Sbjct: 361 HPNRNSILKEY 371
>K9S7N4_9CYAN (tr|K9S7N4) RNA polymerase sigma factor OS=Geitlerinema sp. PCC
7407 GN=GEI7407_1675 PE=3 SV=1
Length = 381
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/310 (40%), Positives = 206/310 (66%), Gaps = 1/310 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL +EE +L +I +L LE ++ L Q REPT AEWA V +
Sbjct: 71 DSIRLYLQEIGRIRLLRADEEIELARKIADLLELERIRADLAEQLEREPTDAEWAQKVDM 130
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
+ A + +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 131 ALPAFRHRLHLGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 190
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 191 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTE 250
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+ V+K L+
Sbjct: 251 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDQVSKNLL 309
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R ++L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 310 REDLESVLGTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 369
Query: 551 CLASHGLDAY 560
+ L Y
Sbjct: 370 PNRNSVLKEY 379
>K9WH45_9CYAN (tr|K9WH45) RNA polymerase sigma factor OS=Microcoleus sp. PCC 7113
GN=Mic7113_4030 PE=3 SV=1
Length = 373
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 127/311 (40%), Positives = 208/311 (66%), Gaps = 3/311 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL +EE +L +I +L LE ++ RL Q REP +EWA V +
Sbjct: 63 DSIRLYLQEIGRIRLLRADEEIELARKIADLLELERIRDRLSDQLEREPQDSEWATEVNM 122
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
A + +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 123 PLQAFRHRLYVGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 182
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 183 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMGRKPTE 242
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQL 489
EE+A ++ +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K L
Sbjct: 243 EEIADRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDQVSKNL 300
Query: 490 MRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
+R ++L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 301 LREDLESVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLR 360
Query: 550 QCLASHGLDAY 560
+ L Y
Sbjct: 361 HPNRNSILKEY 371
>Q9L4T2_NOSP7 (tr|Q9L4T2) RNA polymerase sigma factor OS=Nostoc punctiforme
(strain ATCC 29133 / PCC 73102) GN=sigA PE=3 SV=1
Length = 389
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 124/310 (40%), Positives = 205/310 (66%), Gaps = 1/310 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL +EE +L +I +L LE V+ RL Q R+P +EWA+ V L
Sbjct: 79 DSIRLYLQEIGRIRLLRADEEIELARKIADLLELERVRERLSEQLDRDPRDSEWAEAVQL 138
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
A + +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 139 PLPAFRYRLHVGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 198
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 199 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTE 258
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+ V+K L+
Sbjct: 259 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDQVSKNLL 317
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R +L +L+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 318 REDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 377
Query: 551 CLASHGLDAY 560
+ L Y
Sbjct: 378 PNRNSVLKEY 387
>K9T849_9CYAN (tr|K9T849) RNA polymerase sigma factor OS=Pleurocapsa sp. PCC 7327
GN=Ple7327_3395 PE=3 SV=1
Length = 374
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 128/311 (41%), Positives = 208/311 (66%), Gaps = 3/311 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL EEE +L +I +L LE + +L+ + GR P EWA+ V +
Sbjct: 64 DSIRVYLQEIGRIRLLRAEEEIELARKIADLLELERIYEQLRKRLGRFPNNREWAEAVEM 123
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
A Q +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 124 ELPAFQRRLYLGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 183
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 184 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMRRKPTE 243
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQL 489
EE+A ++ +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K L
Sbjct: 244 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKNL 301
Query: 490 MRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
+R N+L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 302 LREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLR 361
Query: 550 QCLASHGLDAY 560
+ L Y
Sbjct: 362 HPNRNSILKEY 372
>K9Q8G4_9NOSO (tr|K9Q8G4) RNA polymerase sigma factor OS=Nostoc sp. PCC 7107
GN=Nos7107_0427 PE=3 SV=1
Length = 391
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 124/310 (40%), Positives = 205/310 (66%), Gaps = 1/310 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL +EE +L +I +L LE V+ RL Q R+P +EWA+ V L
Sbjct: 81 DSIRLYLQEIGRIRLLRADEEIELARKIADLLELERVRERLSEQLDRDPRDSEWAEAVQL 140
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
A + +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 141 PLPAFRYRLHVGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 200
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 201 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTE 260
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+ V+K L+
Sbjct: 261 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDQVSKNLL 319
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R +L +L+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 320 REDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 379
Query: 551 CLASHGLDAY 560
+ L Y
Sbjct: 380 PNRNSVLKEY 389
>K9TM07_9CYAN (tr|K9TM07) RNA polymerase sigma factor OS=Oscillatoria acuminata
PCC 6304 GN=Oscil6304_3894 PE=3 SV=1
Length = 387
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 201/300 (67%), Gaps = 1/300 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL +EE +L +I +L LE ++ L REP AEWAD V +
Sbjct: 77 DSIRLYLQEIGRIRLLRADEEIELARKIADLLELERIREHLCDHLHREPYDAEWADAVKM 136
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S + +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 137 SVGQFRHRLHCGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 196
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 197 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTE 256
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+ V+K L+
Sbjct: 257 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDQVSKNLL 315
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R ++L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 316 REDLESVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 375
>K9XHA2_9CHRO (tr|K9XHA2) RNA polymerase sigma factor OS=Gloeocapsa sp. PCC 7428
GN=Glo7428_2515 PE=3 SV=1
Length = 390
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 124/310 (40%), Positives = 204/310 (65%), Gaps = 1/310 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL +EE +L +I L +E V+ RL Q REP +EWA+ V L
Sbjct: 80 DSIRLYLQEIGRIRLLRADEEIELARKIAELLEMERVRERLLEQLDREPQDSEWAEAVQL 139
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S + +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 140 SLPTFRYRLHVGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 199
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 200 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTE 259
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+ V+K L+
Sbjct: 260 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDQVSKSLL 318
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R +L +L+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 319 REDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 378
Query: 551 CLASHGLDAY 560
+ L Y
Sbjct: 379 PNRNSVLKEY 388
>K9YFR5_HALP7 (tr|K9YFR5) RNA polymerase sigma factor OS=Halothece sp. (strain
PCC 7418) GN=PCC7418_3695 PE=3 SV=1
Length = 394
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 204/301 (67%), Gaps = 3/301 (0%)
Query: 250 NDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVG 309
D +R++L +LL +EE +L +I +L LE + L++ G EPT EWA+ V
Sbjct: 82 EDSIRLYLQEIGRIRLLRADEEIELARKIADLLELERKRTELEATIGCEPTDEEWAEEVD 141
Query: 310 LSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKF 369
+ + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 142 MPLQKFRRRLMLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKF 201
Query: 370 KPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPT 429
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT
Sbjct: 202 DHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQELGRKPT 261
Query: 430 KEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQ 488
+EE+A ++ +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K
Sbjct: 262 EEEIAERMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKS 319
Query: 489 LMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKL 548
L+R ++L TL+PRER ++RLR+G+EDG K+L EIG +F +++ER+RQ+E++AL KL
Sbjct: 320 LLREDLEDVLDTLSPRERDVLRLRYGLEDGRMKTLEEIGQIFNVTRERIRQIEAKALRKL 379
Query: 549 K 549
+
Sbjct: 380 R 380
>K9PJQ4_9CYAN (tr|K9PJQ4) RNA polymerase sigma factor OS=Calothrix sp. PCC 7507
GN=Cal7507_2774 PE=3 SV=1
Length = 390
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 123/310 (39%), Positives = 205/310 (66%), Gaps = 1/310 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL +EE +L +I +L LE V+ +L Q R+P +EWA+ V L
Sbjct: 80 DSIRLYLQEIGRIRLLRADEEIELARKIADLLELERVREKLSEQLDRDPKDSEWAEAVQL 139
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
A + +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 140 PLPAFRYRLHVGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 199
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 200 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTE 259
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+ V+K L+
Sbjct: 260 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDQVSKNLL 318
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R +L +L+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 319 REDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 378
Query: 551 CLASHGLDAY 560
+ L Y
Sbjct: 379 PNRNSVLKEY 388
>D7E0K7_NOSA0 (tr|D7E0K7) RNA polymerase sigma factor OS=Nostoc azollae (strain
0708) GN=Aazo_2817 PE=3 SV=1
Length = 390
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 124/310 (40%), Positives = 203/310 (65%), Gaps = 1/310 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL +EE +L +I +L LE V+ RL Q REP EWA+ V L
Sbjct: 80 DSIRLYLQEIGRIRLLRADEEIELARKIADLLELERVRDRLYEQLEREPQFKEWAEAVQL 139
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
+ +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 140 PLPTFRYRLHVGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 199
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 200 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTE 259
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+ V+K L+
Sbjct: 260 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDQVSKNLL 318
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R +L +L+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 319 REDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 378
Query: 551 CLASHGLDAY 560
+ L Y
Sbjct: 379 PNRNSVLKEY 388
>B4W0Y8_9CYAN (tr|B4W0Y8) RNA polymerase sigma factor OS=Coleofasciculus
chthonoplastes PCC 7420 GN=MC7420_8305 PE=3 SV=1
Length = 380
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 128/312 (41%), Positives = 207/312 (66%), Gaps = 3/312 (0%)
Query: 250 NDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVG 309
D +R++L +LL +EE +L +I +L LE ++ RL Q REP EWA V
Sbjct: 69 EDSIRLYLQEIGRIRLLRADEEIELARKIADLLELERIRDRLYDQLEREPKEGEWAKEVE 128
Query: 310 LSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKF 369
+ A + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 129 MELPAFRQRLFLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKF 188
Query: 370 KPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPT 429
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT
Sbjct: 189 DHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQELGRKPT 248
Query: 430 KEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQ 488
+EE+A ++ +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K
Sbjct: 249 EEEIADRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDQVSKN 306
Query: 489 LMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKL 548
L+R ++L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL
Sbjct: 307 LLREDLESVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKL 366
Query: 549 KQCLASHGLDAY 560
+ + L Y
Sbjct: 367 RHPNRNSILKEY 378
>B4WPM0_9SYNE (tr|B4WPM0) RNA polymerase sigma factor OS=Synechococcus sp. PCC
7335 GN=S7335_5088 PE=3 SV=1
Length = 404
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 121/299 (40%), Positives = 202/299 (67%), Gaps = 1/299 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL EEE +L +I +L LE ++ + Q EPT A+WA+ V +
Sbjct: 94 DSIRLYLQEIGRIRLLRAEEEIELARKIADLLELERIRDEIDDQLDDEPTDADWANAVDM 153
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
A + +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 154 PLPAFRRRLYQGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 213
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 214 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQELGRKPTE 273
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+ V+K L+
Sbjct: 274 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDEVSKSLL 332
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
R ++L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 333 REDLESVLSTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLR 391
>K9QTZ2_NOSS7 (tr|K9QTZ2) RNA polymerase sigma factor OS=Nostoc sp. (strain ATCC
29411 / PCC 7524) GN=Nos7524_2732 PE=3 SV=1
Length = 390
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 123/310 (39%), Positives = 205/310 (66%), Gaps = 1/310 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL +EE +L +I +L LE ++ RL Q R+P +EWA+ V L
Sbjct: 80 DSIRLYLQEIGRIRLLRADEEIELARKIADLLELERIRERLSEQLERDPHDSEWAEAVQL 139
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
A + +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 140 PLPAFRYRLHLGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 199
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 200 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTE 259
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+ V+K L+
Sbjct: 260 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDQVSKNLL 318
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R +L +L+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 319 REDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 378
Query: 551 CLASHGLDAY 560
+ L Y
Sbjct: 379 PNRNSVLKEY 388
>Q3MDA3_ANAVT (tr|Q3MDA3) RNA polymerase sigma factor OS=Anabaena variabilis
(strain ATCC 29413 / PCC 7937) GN=Ava_1410 PE=3 SV=1
Length = 390
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/310 (39%), Positives = 205/310 (66%), Gaps = 1/310 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL +EE +L +I +L LE V+ RL + R+P +EWA+ V L
Sbjct: 80 DSIRLYLQEIGRIRLLRADEEIELARKIADLLELERVRERLSEKLERDPRDSEWAEAVQL 139
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
A + +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 140 PLPAFRYRLHIGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 199
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 200 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTE 259
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+ V+K L+
Sbjct: 260 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDQVSKNLL 318
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R +L +L+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 319 REDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 378
Query: 551 CLASHGLDAY 560
+ L Y
Sbjct: 379 PNRNSVLKEY 388
>Q7U5C4_SYNPX (tr|Q7U5C4) RNA polymerase sigma factor OS=Synechococcus sp.
(strain WH8102) GN=sigA PE=3 SV=1
Length = 471
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 205/306 (66%), Gaps = 3/306 (0%)
Query: 245 EGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEW 304
+G+ D +R++L +LL +EE +L +I +L LEE+ + +S GREP EW
Sbjct: 155 KGVYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLHLEELAAQFESDNGREPDKKEW 214
Query: 305 ADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMK 364
A V + + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL++
Sbjct: 215 AALVEMPLIRFRRRLMLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIR 274
Query: 365 SVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREG 424
+ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 275 AAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEF 334
Query: 425 NVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDV 483
PT+EE+A + +T++KL + +A++P+S++ + ++D+ + I AD IE P+
Sbjct: 335 GRKPTEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEAD--IENPEQ 392
Query: 484 YVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESR 543
VAK L+R +L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++
Sbjct: 393 DVAKNLLREDLEGVLATLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAK 452
Query: 544 ALDKLK 549
AL KL+
Sbjct: 453 ALRKLR 458
>M1WSP5_9NOST (tr|M1WSP5) RNA polymerase sigma factor OS=Richelia intracellularis
HH01 GN=RINTHH_14140 PE=3 SV=1
Length = 390
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/310 (39%), Positives = 204/310 (65%), Gaps = 1/310 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL +EE +L +I +L +E V+ RL Q REP +EWA+ V +
Sbjct: 80 DSIRLYLQEIGRIRLLRADEEIELARKIADLLEMERVRDRLYDQLAREPKYSEWAEAVKI 139
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
+ +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 140 PLPQFRYRLHIGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 199
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 200 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTE 259
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+ V+K L+
Sbjct: 260 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDQVSKGLL 318
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R +L +L+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 319 REDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 378
Query: 551 CLASHGLDAY 560
+ L Y
Sbjct: 379 PNRNSVLKEY 388
>B9SDA3_RICCO (tr|B9SDA3) RNA polymerase sigma factor rpoD1, putative OS=Ricinus
communis GN=RCOM_1515490 PE=4 SV=1
Length = 569
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/314 (39%), Positives = 195/314 (62%)
Query: 247 LDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWAD 306
+D +DPLR T +LLT EE +L + IQ+L +LE ++ L ++G +PT A+WA
Sbjct: 253 VDYSDPLRYLRGTTSTSRLLTASEELELSAAIQDLLKLERLQEELAERYGGQPTFAQWAA 312
Query: 307 GVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSV 366
G+ L+ ++ GT K+K+I +N+R+V+ +AKNY G G++ QDL+QEG GL++
Sbjct: 313 AAGVDQRTLRKRINHGTICKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGA 372
Query: 367 EKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNV 426
EKF G +F++YA+WWI+Q +R++L SRTIRLP ++ ++ EA+K E
Sbjct: 373 EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGR 432
Query: 427 HPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVA 486
HP EE+A G+++ +L +L + P S+ Q + + D E+ AD ET + +
Sbjct: 433 HPDDEEVAEAAGLSMKRLSAVLLTPKAPRSLDQKIGMNMDLKPSEVIADPEAETAEELLM 492
Query: 487 KQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALD 546
KQ M++ +L+TLNPRE +++R RFG+EDG K+L EIG + G+S+ER+RQ+ES A
Sbjct: 493 KQFMKQDLEKVLNTLNPRETQVVRWRFGLEDGRMKTLQEIGEIMGVSRERIRQIESSAFR 552
Query: 547 KLKQCLASHGLDAY 560
KLK + L Y
Sbjct: 553 KLKNKKRTKQLKQY 566
>D7UB90_VITVI (tr|D7UB90) Putative uncharacterized protein OS=Vitis vinifera
GN=VIT_15s0024g00640 PE=4 SV=1
Length = 575
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/314 (40%), Positives = 196/314 (62%)
Query: 247 LDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWAD 306
+D +DPLR T +LLT EE +L IQ+L +LE+++ L+ +FG +PT A+WA
Sbjct: 259 VDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAA 318
Query: 307 GVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSV 366
G+ L+ + G R K+K+I +N+R+V+ +AKNY G G++ QDL+QEG GL++
Sbjct: 319 AAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVRGA 378
Query: 367 EKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNV 426
EKF G +F++YA+WWI+Q +R++L SRTIRLP ++ ++ EA+K E
Sbjct: 379 EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGR 438
Query: 427 HPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVA 486
HP EE+A G+++ +L +L + P S+ Q + +Q+ E+ AD ET + +
Sbjct: 439 HPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVIADPDAETAEELLI 498
Query: 487 KQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALD 546
KQ MR +L++LNPRE+++IR R+G+EDG K+L EIG + G+S+ER+RQ+ES A
Sbjct: 499 KQFMREDLEKVLNSLNPREKQVIRWRYGLEDGRTKTLQEIGELMGVSRERIRQIESCAFR 558
Query: 547 KLKQCLASHGLDAY 560
KLK + L Y
Sbjct: 559 KLKNKRRTKHLQQY 572
>Q05YJ7_9SYNE (tr|Q05YJ7) RNA polymerase sigma factor OS=Synechococcus sp. BL107
GN=BL107_10222 PE=3 SV=1
Length = 451
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 205/306 (66%), Gaps = 3/306 (0%)
Query: 245 EGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEW 304
+G+ D +R++L +LL +EE +L +I +L LEE+ + +S GREP EW
Sbjct: 135 KGVYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLYLEELAAQFESDNGREPDKKEW 194
Query: 305 ADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMK 364
A V + + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL++
Sbjct: 195 AALVEMPLIRFRRRLMLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIR 254
Query: 365 SVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREG 424
+ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 255 AAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEF 314
Query: 425 NVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDV 483
PT+EE+A + +T++KL + +A++P+S++ + ++D+ + I AD IE P+
Sbjct: 315 GRKPTEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEAD--IENPEQ 372
Query: 484 YVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESR 543
VAK L+R +L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++
Sbjct: 373 DVAKNLLREDLEGVLATLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAK 432
Query: 544 ALDKLK 549
AL KL+
Sbjct: 433 ALRKLR 438
>K9XY46_STAC7 (tr|K9XY46) RNA polymerase sigma factor OS=Stanieria cyanosphaera
(strain ATCC 29371 / PCC 7437) GN=Sta7437_3976 PE=3 SV=1
Length = 372
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/311 (40%), Positives = 208/311 (66%), Gaps = 3/311 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL EEE +L +I +L LE ++ R+ + R P+ AEWA+ V +
Sbjct: 62 DSIRIYLQEIGRIRLLRAEEEIELARKIADLLELERIRERMADRLERYPSDAEWAEEVNM 121
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
+ +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 122 RLPEFRRRLFYGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 181
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 182 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTE 241
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQL 489
EE+A ++ +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K L
Sbjct: 242 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDQVSKSL 299
Query: 490 MRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
+R N+L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 300 LREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLR 359
Query: 550 QCLASHGLDAY 560
+ L Y
Sbjct: 360 HPNRNSILKEY 370
>R0IC61_9BRAS (tr|R0IC61) Uncharacterized protein OS=Capsella rubella
GN=CARUB_v10008711mg PE=4 SV=1
Length = 571
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/323 (39%), Positives = 201/323 (62%)
Query: 238 RVEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGR 297
R ++ + + +D NDPLR + KLLT EE +L + IQ+L +LE ++ L + GR
Sbjct: 244 RKKRVVAQEVDHNDPLRYLRVTTSSSKLLTVREEHELSAGIQDLLKLERLQAELTERCGR 303
Query: 298 EPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQE 357
+PT ++WA G+ +L+ ++ GT+ K+K+I +N+R+V+ +AKNY G G++ QDL+QE
Sbjct: 304 QPTFSQWASAAGVDQKSLRKRINYGTQCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQE 363
Query: 358 GSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAK 417
G GL++ EKF G +F++YA+WWI+Q +R++L SR IRLP ++ ++ EA+
Sbjct: 364 GCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEAR 423
Query: 418 KFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTA 477
K E HP EE+A G+++ +L +L + + P S+ Q + +Q+ E+ AD
Sbjct: 424 KQLYTEKGRHPENEEVAEATGLSMKRLMAVLLSPKPPRSLDQKIGMNQNLKPSEVIADPE 483
Query: 478 IETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERV 537
ET + + KQ MR +L +L RE+++IR RFG+EDG K+L EIG + G+S+ERV
Sbjct: 484 AETSEDILIKQFMREDLDKVLDSLGTREKQVIRWRFGMEDGRMKTLQEIGELMGVSRERV 543
Query: 538 RQLESRALDKLKQCLASHGLDAY 560
RQ+ES A KLK S+ L Y
Sbjct: 544 RQIESSAFRKLKNKKRSNHLQQY 566
>Q3AWQ6_SYNS9 (tr|Q3AWQ6) RNA polymerase sigma factor OS=Synechococcus sp.
(strain CC9902) GN=Syncc9902_1678 PE=3 SV=1
Length = 451
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 205/306 (66%), Gaps = 3/306 (0%)
Query: 245 EGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEW 304
+G+ D +R++L +LL +EE +L +I +L LEE+ + +S GREP EW
Sbjct: 135 KGVYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLYLEELAAQFESDNGREPDKKEW 194
Query: 305 ADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMK 364
A V + + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL++
Sbjct: 195 AALVEMPLIRFRRRLMLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIR 254
Query: 365 SVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREG 424
+ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 255 AAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEF 314
Query: 425 NVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDV 483
PT+EE+A + +T++KL + +A++P+S++ + ++D+ + I AD IE P+
Sbjct: 315 GRKPTEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEAD--IENPEQ 372
Query: 484 YVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESR 543
VAK L+R +L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++
Sbjct: 373 DVAKNLLREDLEGVLATLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAK 432
Query: 544 ALDKLK 549
AL KL+
Sbjct: 433 ALRKLR 438
>D8G4S3_9CYAN (tr|D8G4S3) RNA polymerase sigma factor OS=Oscillatoria sp. PCC
6506 GN=OSCI_3480020 PE=3 SV=1
Length = 391
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/299 (40%), Positives = 203/299 (67%), Gaps = 1/299 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL +EE +L +I +L LE ++ +L + R+P EWA+ VG+
Sbjct: 81 DSIRLYLQEIGRIRLLRADEEIELARKIADLLELERIREQLCEELERDPKDNEWANAVGM 140
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
A + +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 141 PLPAFRHRLHLGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 200
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 201 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTE 260
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+ V+K L+
Sbjct: 261 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDQVSKNLL 319
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
R ++L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 320 REDLESVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLR 378
>K9Q1H6_9CYAN (tr|K9Q1H6) RNA polymerase sigma factor OS=Leptolyngbya sp. PCC
7376 GN=Lepto7376_2997 PE=3 SV=1
Length = 379
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 124/300 (41%), Positives = 204/300 (68%), Gaps = 3/300 (1%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL EEE +L +I +L LE ++ +L+ R PT EWA+ G+
Sbjct: 69 DSIRIYLQEIGRIRLLRAEEEIELARKIADLLELERMREQLEEHESRVPTDKEWAEAAGM 128
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
+ +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 129 PLKDFRRRLFHGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 188
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 189 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQELGRKPTE 248
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQL 489
EE+A ++ +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K L
Sbjct: 249 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDQVSKSL 306
Query: 490 MRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
+R N+L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 307 LREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLR 366
>D0CLH5_9SYNE (tr|D0CLH5) RNA polymerase sigma factor OS=Synechococcus sp. WH
8109 GN=SH8109_2432 PE=3 SV=1
Length = 458
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 205/306 (66%), Gaps = 3/306 (0%)
Query: 245 EGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEW 304
+G+ D +R++L +LL +EE +L +I +L LEE+ + +S GREP EW
Sbjct: 142 KGVYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLYLEELAAQFESDNGREPDNKEW 201
Query: 305 ADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMK 364
A V + + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL++
Sbjct: 202 AALVEMPLIRFRRRLMLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIR 261
Query: 365 SVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREG 424
+ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 262 AAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEF 321
Query: 425 NVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDV 483
PT+EE+A + +T++KL + +A++P+S++ + ++D+ + I AD IE P+
Sbjct: 322 GRKPTEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEAD--IENPEQ 379
Query: 484 YVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESR 543
VAK L+R +L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++
Sbjct: 380 DVAKNLLREDLEGVLATLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAK 439
Query: 544 ALDKLK 549
AL KL+
Sbjct: 440 ALRKLR 445
>K9R7S3_9CYAN (tr|K9R7S3) RNA polymerase sigma factor OS=Rivularia sp. PCC 7116
GN=Riv7116_1014 PE=3 SV=1
Length = 389
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 128/328 (39%), Positives = 211/328 (64%), Gaps = 3/328 (0%)
Query: 233 VQGRLRVEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQ 292
+GR R + K K + D +R++L +LL +EE +L +I +L LE V RL
Sbjct: 63 AKGRRRTQAKKKHYTE--DSIRLYLQEIGRIRLLRADEEIELARKIADLLELERVGDRLV 120
Query: 293 SQFGREPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQ 352
Q R+P +EWA+ V L + +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQ
Sbjct: 121 QQLERQPQESEWAEAVQLPLQKFRYRLHVGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQ 180
Query: 353 DLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGK 412
DL+QEGS+GL+++ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + +
Sbjct: 181 DLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISR 240
Query: 413 LIEAKKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEI 472
+ + K ++E PT+EE+A ++ +T++KL + +A++P+S++ + ++D+ +
Sbjct: 241 IKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDF 300
Query: 473 TADTAIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGL 532
ETP+ V+K L+R +L +L+PRER ++RLR+G++DG K+L EIG +F +
Sbjct: 301 IESDG-ETPEDQVSKSLLREDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNV 359
Query: 533 SKERVRQLESRALDKLKQCLASHGLDAY 560
++ER+RQ+E++AL KL+ + L Y
Sbjct: 360 TRERIRQIEAKALRKLRHPNRNSVLKEY 387
>K9TYL7_9CYAN (tr|K9TYL7) RNA polymerase sigma factor OS=Chroococcidiopsis
thermalis PCC 7203 GN=Chro_1963 PE=3 SV=1
Length = 392
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 124/326 (38%), Positives = 211/326 (64%), Gaps = 1/326 (0%)
Query: 235 GRLRVEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQ 294
G+ R + K+ D +R++L +LL +EE +L +I +L LE ++ +L +
Sbjct: 66 GKTRRRAQTKKKQYTEDSIRLYLQEIGRIRLLRADEEIELARKIADLLELERIREKLSDR 125
Query: 295 FGREPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDL 354
REP +EWA+ V + A + +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL
Sbjct: 126 LDREPQDSEWAEAVKQNLPAFRYRLHVGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDL 185
Query: 355 LQEGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLI 414
+QEGS+GL+++ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++
Sbjct: 186 IQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIK 245
Query: 415 EAKKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITA 474
+ K ++E PT+EE+A ++ +T++KL + +A++P+S++ + ++D+ +
Sbjct: 246 KTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIE 305
Query: 475 DTAIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSK 534
ETP+ V+K L+R +L +L+PRER ++RLR+G++DG K+L EIG +F +++
Sbjct: 306 SDG-ETPEDQVSKNLLREDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTR 364
Query: 535 ERVRQLESRALDKLKQCLASHGLDAY 560
ER+RQ+E++AL KL+ + L Y
Sbjct: 365 ERIRQIEAKALRKLRHPNRNSVLKEY 390
>Q3ALS7_SYNSC (tr|Q3ALS7) RNA polymerase sigma factor OS=Synechococcus sp.
(strain CC9605) GN=Syncc9605_0681 PE=3 SV=1
Length = 435
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 205/306 (66%), Gaps = 3/306 (0%)
Query: 245 EGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEW 304
+G+ D +R++L +LL +EE +L +I +L LEE+ + +S GREP EW
Sbjct: 119 KGVYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLYLEELAAQFESDNGREPDNKEW 178
Query: 305 ADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMK 364
A V + + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL++
Sbjct: 179 AALVEMPLIRFRRRLMLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIR 238
Query: 365 SVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREG 424
+ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 239 AAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEF 298
Query: 425 NVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDV 483
PT+EE+A + +T++KL + +A++P+S++ + ++D+ + I AD IE P+
Sbjct: 299 GRKPTEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEAD--IENPEQ 356
Query: 484 YVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESR 543
VAK L+R +L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++
Sbjct: 357 DVAKNLLREDLEGVLATLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAK 416
Query: 544 ALDKLK 549
AL KL+
Sbjct: 417 ALRKLR 422
>K9X1I3_9NOST (tr|K9X1I3) RNA polymerase sigma factor OS=Cylindrospermum stagnale
PCC 7417 GN=Cylst_3438 PE=3 SV=1
Length = 390
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 123/310 (39%), Positives = 204/310 (65%), Gaps = 1/310 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL +EE +L +I +L LE V+ RL + R+P +EWA V L
Sbjct: 80 DSIRLYLQEIGRIRLLRADEEIELARKIADLLELERVRERLSERLERDPKDSEWAAEVQL 139
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
A + +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 140 PLPAFRYRLHVGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 199
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 200 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTE 259
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+ V+K L+
Sbjct: 260 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDQVSKNLL 318
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R +L +L+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 319 REDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 378
Query: 551 CLASHGLDAY 560
+ L Y
Sbjct: 379 PNRNSVLKEY 388
>A9BEB7_PROM4 (tr|A9BEB7) RNA polymerase sigma factor OS=Prochlorococcus marinus
(strain MIT 9211) GN=P9211_04961 PE=3 SV=1
Length = 425
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 123/306 (40%), Positives = 207/306 (67%), Gaps = 3/306 (0%)
Query: 245 EGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEW 304
+G+ D +R++L +LL +EE +L +I +L LEE+ I+ +S+ G P+ EW
Sbjct: 109 KGVYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLNLEEIAIQFESENGHYPSKKEW 168
Query: 305 ADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMK 364
A V + + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL++
Sbjct: 169 AALVEMPVIRFRRRLMLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIR 228
Query: 365 SVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREG 424
+ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 229 AAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEF 288
Query: 425 NVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDV 483
P++EE+A + +T++KL + +A++P+S++ + ++D+ + I +D+ E P++
Sbjct: 289 GRKPSEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDS--ENPEL 346
Query: 484 YVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESR 543
VAK L+R +L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++
Sbjct: 347 DVAKTLLREDLEGVLATLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAK 406
Query: 544 ALDKLK 549
AL KL+
Sbjct: 407 ALRKLR 412
>K9W354_9CYAN (tr|K9W354) RNA polymerase sigma factor OS=Crinalium epipsammum PCC
9333 GN=Cri9333_3816 PE=3 SV=1
Length = 383
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 124/300 (41%), Positives = 205/300 (68%), Gaps = 3/300 (1%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL +EE +L +I L +LE V +L++Q REP +EWA V +
Sbjct: 73 DSIRLYLQEIGRIRLLRADEEIELARKIAELLQLERVYEQLKAQLDREPKDSEWALAVEM 132
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
+ +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 133 PLPQFRHRLYLGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 192
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 193 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTE 252
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQL 489
EE+A ++ +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K L
Sbjct: 253 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKNL 310
Query: 490 MRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
+R ++L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 311 LREDLESVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLR 370
>D4TQC8_9NOST (tr|D4TQC8) RNA polymerase sigma factor OS=Raphidiopsis brookii D9
GN=CRD_00598 PE=3 SV=1
Length = 390
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 123/310 (39%), Positives = 201/310 (64%), Gaps = 1/310 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL +EE +L +I +L LE V+ L Q REP EWA+ V L
Sbjct: 80 DSIRLYLQEIGRIRLLRADEEIELARKIADLLELERVRDDLYEQLEREPEFREWAEAVKL 139
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
+ +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 140 PLPTFRYRLHVGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 199
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 200 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTE 259
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+ V+K L+
Sbjct: 260 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDQVSKSLL 318
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R +L +L PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 319 REDLERVLDSLGPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 378
Query: 551 CLASHGLDAY 560
+ L Y
Sbjct: 379 PNRNSVLKEY 388
>K9V2E9_9CYAN (tr|K9V2E9) RNA polymerase sigma factor OS=Calothrix sp. PCC 6303
GN=Cal6303_3070 PE=3 SV=1
Length = 389
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 128/347 (36%), Positives = 219/347 (63%), Gaps = 12/347 (3%)
Query: 223 DESYLTRKSD---------VQGRLRVEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQ 273
D+ ++ +SD V+ R R + K K + D +R++L +LL +EE +
Sbjct: 44 DDEFIDSQSDEDDTKPGKGVKSRRRAQAKKKHYTE--DSIRLYLQEIGRIRLLRADEEIE 101
Query: 274 LISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHAN 333
L +I +L LE ++ +L Q R+P +EWA+ V + + +L G R+K+K++ +N
Sbjct: 102 LARKIADLLELERIREKLSQQLDRDPKDSEWAEAVQVPLPQFRYRLHIGRRAKDKMVQSN 161
Query: 334 LRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRAL 393
LR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +F++YA WWIRQ I RA+
Sbjct: 162 LRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAI 221
Query: 394 FLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARI 453
SRTIRLP ++Y + ++ + K ++E PT+EE+A ++ +T++KL + +A++
Sbjct: 222 ADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQL 281
Query: 454 PLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRF 513
P+S++ + ++D+ + ETP+ V+K L+R +L +L+PRER ++RLR+
Sbjct: 282 PISLETPIGKEEDSRLGDFIESDG-ETPEDQVSKNLLREDLEKVLDSLSPRERDVLRLRY 340
Query: 514 GIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGLDAY 560
G++DG K+L EIG +F +++ER+RQ+E++AL KL+ + L Y
Sbjct: 341 GLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSVLKEY 387
>A4CRY9_SYNPV (tr|A4CRY9) RNA polymerase sigma factor OS=Synechococcus sp.
(strain WH7805) GN=WH7805_13938 PE=3 SV=1
Length = 447
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/306 (40%), Positives = 204/306 (66%), Gaps = 3/306 (0%)
Query: 245 EGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEW 304
+G+ D +R++L +LL +EE +L +I +L LEE+ + +S G+ P EW
Sbjct: 131 KGVYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLHLEELAAQFESDNGKLPDTKEW 190
Query: 305 ADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMK 364
A V + + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL++
Sbjct: 191 AALVEMPVIRFRRRLMLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIR 250
Query: 365 SVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREG 424
+ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 251 AAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEF 310
Query: 425 NVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDV 483
PT+EE+A + +T++KL + +A++P+S++ + ++D+ + I AD IE P+
Sbjct: 311 GRKPTEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEAD--IENPEQ 368
Query: 484 YVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESR 543
VAK L+R +L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++
Sbjct: 369 DVAKNLLREDLEGVLATLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAK 428
Query: 544 ALDKLK 549
AL KL+
Sbjct: 429 ALRKLR 434
>D7KIT0_ARALL (tr|D7KIT0) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_470915 PE=4 SV=1
Length = 572
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/323 (39%), Positives = 200/323 (61%)
Query: 238 RVEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGR 297
R ++ + + +D NDPLR + KLLT EE +L + IQ+L +LE ++ L + GR
Sbjct: 245 RKKRLVAQEVDHNDPLRYLRMTTSSSKLLTVREEHELSAGIQDLLKLERLQTELTERCGR 304
Query: 298 EPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQE 357
+PT A+WA G+ +L+ ++ GT K+K+I +N+R+V+ +AKNY G G++ QDL+QE
Sbjct: 305 QPTFAQWASAAGVDQKSLRKRIHHGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQE 364
Query: 358 GSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAK 417
G GL++ EKF G +F++YA+WWI+Q +R++L SR IRLP ++ ++ EA+
Sbjct: 365 GCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEAR 424
Query: 418 KFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTA 477
K E HP EE+A G+++ +L +L + + P S+ Q + +Q+ E+ AD
Sbjct: 425 KQLYSETGKHPKNEEIAEATGLSMKRLMAVLLSPKPPRSLDQKIGMNQNLKPSEVIADPE 484
Query: 478 IETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERV 537
T + + K+ MR+ +L +L RE+++IR RFG+EDG K+L EIG + G+S+ERV
Sbjct: 485 AVTSEDILIKEFMRQDLDKVLDSLGTREKQVIRWRFGMEDGRMKTLQEIGEMMGVSRERV 544
Query: 538 RQLESRALDKLKQCLASHGLDAY 560
RQ+ES A KLK S+ L Y
Sbjct: 545 RQIESSAFRKLKNKKRSNHLQQY 567
>G4FIM1_9SYNE (tr|G4FIM1) RNA polymerase sigma factor OS=Synechococcus sp. WH
8016 GN=Syn8016DRAFT_1273 PE=3 SV=1
Length = 443
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/306 (40%), Positives = 204/306 (66%), Gaps = 3/306 (0%)
Query: 245 EGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEW 304
+G+ D +R++L +LL +EE +L +I +L LEE+ + +S G+ P EW
Sbjct: 127 KGVYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLHLEELAAQFESDNGKLPDTKEW 186
Query: 305 ADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMK 364
A V + + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL++
Sbjct: 187 AALVEMPVIRFRRRLMLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIR 246
Query: 365 SVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREG 424
+ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 247 AAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEF 306
Query: 425 NVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDV 483
PT+EE+A + +T++KL + +A++P+S++ + ++D+ + I AD IE P+
Sbjct: 307 GRKPTEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEAD--IENPEQ 364
Query: 484 YVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESR 543
VAK L+R +L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++
Sbjct: 365 DVAKNLLREDLEGVLATLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAK 424
Query: 544 ALDKLK 549
AL KL+
Sbjct: 425 ALRKLR 430
>K9YRT3_DACSA (tr|K9YRT3) RNA polymerase sigma factor OS=Dactylococcopsis salina
PCC 8305 GN=Dacsa_0937 PE=3 SV=1
Length = 388
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 205/301 (68%), Gaps = 3/301 (0%)
Query: 250 NDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVG 309
D +R++L +LL +EE +L +I +L LE + L++ G EPT EWA+ VG
Sbjct: 76 EDSIRLYLQEIGRIRLLRADEEIELARKIADLSELERTRTELEATIGCEPTDEEWAEEVG 135
Query: 310 LSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKF 369
+ + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 136 QALPKFRRRLLLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKF 195
Query: 370 KPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPT 429
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT
Sbjct: 196 DHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQELARKPT 255
Query: 430 KEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQ 488
+EE+A ++ +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K
Sbjct: 256 EEEIAERMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKS 313
Query: 489 LMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKL 548
L+R ++L TL+PRER ++RLR+G+EDG K+L EIG +F +++ER+RQ+E++AL KL
Sbjct: 314 LLREDLEDVLDTLSPRERDVLRLRYGLEDGRMKTLEEIGQIFNVTRERIRQIEAKALRKL 373
Query: 549 K 549
+
Sbjct: 374 R 374
>Q10UV2_TRIEI (tr|Q10UV2) RNA polymerase sigma factor OS=Trichodesmium erythraeum
(strain IMS101) GN=Tery_5068 PE=3 SV=1
Length = 386
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/310 (39%), Positives = 204/310 (65%), Gaps = 1/310 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL +EE +L +I +L LE ++ L REP ++EWA+ V +
Sbjct: 76 DSIRLYLQEIGRIRLLRADEEIELARKIADLLELERIREELIYHLDREPQVSEWANAVDM 135
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
+ +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 136 ELPKFKRRLILGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 195
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 196 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTE 255
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
EE+A + +T++KL + +A++P+S++ + ++D+ + ETP+ V+K L+
Sbjct: 256 EEIATSMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDEVSKNLL 314
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R ++L++L+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 315 REDLESVLNSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 374
Query: 551 CLASHGLDAY 560
+ L Y
Sbjct: 375 PNRNSILKEY 384
>A5GJC2_SYNPW (tr|A5GJC2) RNA polymerase sigma factor OS=Synechococcus sp.
(strain WH7803) GN=rpoD PE=3 SV=1
Length = 450
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/306 (40%), Positives = 204/306 (66%), Gaps = 3/306 (0%)
Query: 245 EGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEW 304
+G+ D +R++L +LL +EE +L +I +L LEE+ + +S G+ P EW
Sbjct: 134 KGVYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLHLEELAAQFESDNGKLPDTKEW 193
Query: 305 ADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMK 364
A V + + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL++
Sbjct: 194 AALVEMPVIRFRRRLMLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIR 253
Query: 365 SVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREG 424
+ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 254 AAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEF 313
Query: 425 NVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDV 483
PT+EE+A + +T++KL + +A++P+S++ + ++D+ + I AD IE P+
Sbjct: 314 GRKPTEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEAD--IENPEQ 371
Query: 484 YVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESR 543
VAK L+R +L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++
Sbjct: 372 DVAKNLLREDLEGVLATLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAK 431
Query: 544 ALDKLK 549
AL KL+
Sbjct: 432 ALRKLR 437
>D4TFK7_9NOST (tr|D4TFK7) RNA polymerase sigma factor OS=Cylindrospermopsis
raciborskii CS-505 GN=CRC_01163 PE=3 SV=1
Length = 390
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/310 (39%), Positives = 201/310 (64%), Gaps = 1/310 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL +EE +L +I +L LE V+ L Q REP EWA+ V L
Sbjct: 80 DSIRLYLQEIGRIRLLRADEEIELARKIADLLELERVRDDLYEQLEREPEFREWAEAVKL 139
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
+ +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 140 PLPTFRYRLHVGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 199
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 200 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTE 259
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+ V+K L+
Sbjct: 260 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDQVSKSLL 318
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R +L +L PRER ++RLR+G+++G K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 319 REDLERVLDSLGPRERDVLRLRYGLDNGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 378
Query: 551 CLASHGLDAY 560
+ L Y
Sbjct: 379 PNRNSVLKEY 388
>B9IPZ1_POPTR (tr|B9IPZ1) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_780378 PE=4 SV=1
Length = 564
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 122/303 (40%), Positives = 192/303 (63%)
Query: 247 LDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWAD 306
+DQ+DPLR F + +LL+ EE +L IQ+L +LE ++ L+ +FG +PT A+WA
Sbjct: 248 VDQSDPLRFFRGASTSSRLLSATEEVELSEGIQDLLKLERIEEELKERFGGKPTFAQWAA 307
Query: 307 GVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSV 366
+ L+ +L K+K+I +N+R+V+ +AKNY G G++ QDL+QEG GL++ V
Sbjct: 308 AARVDQITLRKRLNYAILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGV 367
Query: 367 EKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNV 426
EKF G +F++YA+WWIRQ +RR+L SRTIRLP ++ ++ EA+K + E
Sbjct: 368 EKFDASKGFKFSTYAHWWIRQAVRRSLSDQSRTIRLPFHMVDATYRVKEARKQFYSENGR 427
Query: 427 HPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVA 486
HP +E+A G+++ +L +L + P S+ Q + + D E+TAD ET + +
Sbjct: 428 HPDDKEVAEATGLSMKRLSAVLLTPKAPRSLDQKMGFNMDLKLSEVTADPEAETAEDLLM 487
Query: 487 KQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALD 546
K+ M++ +L +L+PRE ++IR RFG+EDG K+L EIG + G+S+ER+RQ+E A
Sbjct: 488 KEFMKKDLERVLESLSPRENQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIELSAFR 547
Query: 547 KLK 549
KLK
Sbjct: 548 KLK 550
>Q59965_SYNP2 (tr|Q59965) RNA polymerase sigma factor OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6) GN=sigA PE=3 SV=1
Length = 375
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 202/300 (67%), Gaps = 3/300 (1%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL EEE +L +I +L LE ++ +L R PT EWA+ G+
Sbjct: 65 DSIRIYLQEIGRIRLLRAEEEIELARKIADLLELERMREQLTEHESRVPTDKEWAEAAGM 124
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
+ +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 125 PLKDFRRRLFHGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 184
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 185 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQELGRKPTE 244
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQL 489
EE+A ++ +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K L
Sbjct: 245 EEIAERMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDQVSKSL 302
Query: 490 MRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
+R N+L TL+ RER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 303 LREDLENVLDTLSARERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLR 362
>A2C0V5_PROM1 (tr|A2C0V5) RNA polymerase sigma factor OS=Prochlorococcus marinus
(strain NATL1A) GN=NATL1_05531 PE=3 SV=1
Length = 420
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 127/320 (39%), Positives = 209/320 (65%), Gaps = 3/320 (0%)
Query: 245 EGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEW 304
+G+ D +R++L +LL +EE +L +I +L +LEE + +S+ G P++ EW
Sbjct: 102 KGVYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLQLEEEAAQFESENGHFPSVKEW 161
Query: 305 ADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMK 364
A + + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL++
Sbjct: 162 AVLADMPLTRFRRRLMLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIR 221
Query: 365 SVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREG 424
+ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 222 AAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEF 281
Query: 425 NVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDV 483
PT+EE+A + +T++KL + +A++P+S++ + ++D+ + I AD IE P+
Sbjct: 282 GRKPTEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEAD--IENPEQ 339
Query: 484 YVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESR 543
VAK L+R +L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++
Sbjct: 340 DVAKTLLREDLEGVLATLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAK 399
Query: 544 ALDKLKQCLASHGLDAYANL 563
AL KL+ + L Y L
Sbjct: 400 ALRKLRHPNRNGVLKEYIKL 419
>Q46GS6_PROMT (tr|Q46GS6) RNA polymerase sigma factor OS=Prochlorococcus marinus
(strain NATL2A) GN=PMN2A_1829 PE=3 SV=1
Length = 420
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 127/320 (39%), Positives = 209/320 (65%), Gaps = 3/320 (0%)
Query: 245 EGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEW 304
+G+ D +R++L +LL +EE +L +I +L +LEE + +S+ G P++ EW
Sbjct: 102 KGVYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLQLEEEAAQFESENGHFPSVKEW 161
Query: 305 ADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMK 364
A + + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL++
Sbjct: 162 AVLADMPLARFRRRLMLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIR 221
Query: 365 SVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREG 424
+ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 222 AAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEF 281
Query: 425 NVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDV 483
PT+EE+A + +T++KL + +A++P+S++ + ++D+ + I AD IE P+
Sbjct: 282 GRKPTEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEAD--IENPEQ 339
Query: 484 YVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESR 543
VAK L+R +L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++
Sbjct: 340 DVAKTLLREDLEGVLATLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAK 399
Query: 544 ALDKLKQCLASHGLDAYANL 563
AL KL+ + L Y L
Sbjct: 400 ALRKLRHPNRNGVLKEYIKL 419
>Q0I8I7_SYNS3 (tr|Q0I8I7) RNA polymerase sigma factor OS=Synechococcus sp.
(strain CC9311) GN=rpoD PE=3 SV=1
Length = 440
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 125/306 (40%), Positives = 204/306 (66%), Gaps = 3/306 (0%)
Query: 245 EGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEW 304
+G+ D +R++L +LL +EE +L +I +L LEE+ + +S G+ P EW
Sbjct: 124 KGVYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLHLEELAAQFESDNGKLPETKEW 183
Query: 305 ADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMK 364
A V + + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL++
Sbjct: 184 AALVEMPVIRFRRRLMLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIR 243
Query: 365 SVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREG 424
+ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 244 AAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEF 303
Query: 425 NVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDV 483
PT+EE+A + +T++KL + +A++P+S++ + ++D+ + I AD IE P+
Sbjct: 304 GRKPTEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEAD--IENPEQ 361
Query: 484 YVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESR 543
VAK L+R +L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++
Sbjct: 362 DVAKNLLREDLEGVLATLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAK 421
Query: 544 ALDKLK 549
AL KL+
Sbjct: 422 ALRKLR 427
>K7KHD7_SOYBN (tr|K7KHD7) Uncharacterized protein OS=Glycine max PE=4 SV=1
Length = 564
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 123/314 (39%), Positives = 195/314 (62%)
Query: 247 LDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWAD 306
+D +DPLR +LLT EE +L + IQ+L +LE+++ L +FG +PT A+WA
Sbjct: 248 VDYSDPLRYLRTTTSASRLLTPTEEIKLSAGIQDLLKLEKIQEDLAERFGSQPTFAQWAA 307
Query: 307 GVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSV 366
G+ L+ +L G K+K+I +N+R+V+ +AKNY G G++ QDL+QEG GL+K
Sbjct: 308 VAGVDQKTLRKRLNYGIFCKDKMIKSNIRLVISIAKNYQGSGMNLQDLVQEGCRGLVKGA 367
Query: 367 EKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNV 426
EKF G +F++YA+WWI+Q +R++L SRTIRLP ++ ++ EA+K E
Sbjct: 368 EKFDGTKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGR 427
Query: 427 HPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVA 486
P EE+A G+++ +L +L + P S++Q + +Q+ E+ +D ET + +
Sbjct: 428 QPDDEEVAEATGLSMKRLNAVLMTPKAPRSLEQKIGINQNLKPSEVISDPDAETAEEQLL 487
Query: 487 KQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALD 546
KQ M++ L +LNPRER+++R RFG++DG K+L EIG + G+S+ER+RQ+ES A
Sbjct: 488 KQFMKKDLEEALDSLNPRERQVVRWRFGMDDGRTKTLQEIGEMLGVSRERIRQIESSAFK 547
Query: 547 KLKQCLASHGLDAY 560
KLK ++ L Y
Sbjct: 548 KLKNKKRTNHLQQY 561
>L8L5U0_9SYNC (tr|L8L5U0) RNA polymerase sigma factor OS=Synechocystis sp. PCC
7509 GN=Syn7509DRAFT_00044800 PE=3 SV=1
Length = 386
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 125/328 (38%), Positives = 212/328 (64%), Gaps = 3/328 (0%)
Query: 233 VQGRLRVEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQ 292
V+ R R + K K + D +R++L +LL +EE +L +I L ++E V+ +L
Sbjct: 60 VKSRRRAQTKKKHYTE--DSIRLYLQEIGRIRLLRADEEIELARKIAELLQMERVREQLC 117
Query: 293 SQFGREPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQ 352
+ R+P +EWA+ V L + + +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQ
Sbjct: 118 DRLDRDPHDSEWAEAVELPINSFRYRLHVGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQ 177
Query: 353 DLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGK 412
DL+QEGS+GL+++ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + +
Sbjct: 178 DLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISR 237
Query: 413 LIEAKKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEI 472
+ + K ++E PT+EE+A ++ +T++KL + +A++P+S++ + ++D+ +
Sbjct: 238 IKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDF 297
Query: 473 TADTAIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGL 532
ETP+ V+K L+R +L L+PRER ++RLR+G++DG K+L EIG +F +
Sbjct: 298 IESDG-ETPEDQVSKNLLREDLEKVLDGLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNV 356
Query: 533 SKERVRQLESRALDKLKQCLASHGLDAY 560
++ER+RQ+E++AL KL+ + L Y
Sbjct: 357 TRERIRQIEAKALRKLRHPNRNSVLKEY 384
>B5ILG7_9CHRO (tr|B5ILG7) RNA polymerase sigma factor OS=Cyanobium sp. PCC 7001
GN=rpoD_2 PE=3 SV=1
Length = 503
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 124/306 (40%), Positives = 204/306 (66%), Gaps = 3/306 (0%)
Query: 245 EGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEW 304
+G+ D +R++L +LL +EE +L +I +L +LEE+ + ++ G P EW
Sbjct: 187 KGVYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLQLEELAAQFEADHGHYPDNKEW 246
Query: 305 ADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMK 364
A V + + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL++
Sbjct: 247 AALVDMPLIKFRRRLMLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIR 306
Query: 365 SVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREG 424
+ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 307 AAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKTLSQEF 366
Query: 425 NVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDV 483
PT+EE+A + +T++KL + +A++P+S++ + ++D+ + I AD IE P+
Sbjct: 367 GRKPTEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEAD--IENPEQ 424
Query: 484 YVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESR 543
VAK L+R +L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++
Sbjct: 425 DVAKNLLREDLEGVLATLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAK 484
Query: 544 ALDKLK 549
AL KL+
Sbjct: 485 ALRKLR 490
>Q7V698_PROMM (tr|Q7V698) RNA polymerase sigma factor OS=Prochlorococcus marinus
(strain MIT 9313) GN=sigA PE=3 SV=1
Length = 461
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 128/325 (39%), Positives = 210/325 (64%), Gaps = 4/325 (1%)
Query: 228 TRKSDVQGRLRVEKKL-KEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEE 286
T ++D + R K+ +G+ D +R++L +LL +EE +L +I +L LEE
Sbjct: 127 TSEADAKARALANIKIGPKGVYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLHLEE 186
Query: 287 VKIRLQSQFGREPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLG 346
+ + S G P EWA V + + +L G R+KEK++ +NLR+VV +AK Y+
Sbjct: 187 LAEQFNSDHGHYPNNKEWASLVEMPNIKFRRRLMLGRRAKEKMVQSNLRLVVSIAKKYMN 246
Query: 347 RGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENV 406
RGLSFQDL+QEGS+GL+++ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++
Sbjct: 247 RGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHL 306
Query: 407 YTLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQD 466
Y + ++ + K ++E PT+EE+A + +T++KL + +A++P+S++ + ++D
Sbjct: 307 YETISRIKKTTKVLSQEFGRKPTEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEED 366
Query: 467 TTYQE-ITADTAIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSE 525
+ + I +DT E P+ VAK L+R +L TL+PRER ++RLR+G++DG K+L E
Sbjct: 367 SRLGDFIESDT--ENPEQDVAKNLLREDLEGVLATLSPRERDVLRLRYGLDDGRMKTLEE 424
Query: 526 IGTVFGLSKERVRQLESRALDKLKQ 550
IG +F +++ER+RQ+E++AL KL+
Sbjct: 425 IGQIFEVTRERIRQIEAKALRKLRH 449
>L8LB48_9CYAN (tr|L8LB48) RNA polymerase sigma factor OS=Leptolyngbya sp. PCC
6406 GN=Lep6406DRAFT_00037560 PE=3 SV=1
Length = 372
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 199/300 (66%), Gaps = 1/300 (0%)
Query: 250 NDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVG 309
D +R++L +LL EEE +L +I +L LE V +L R+P AEWA+ V
Sbjct: 61 EDSIRLYLQEIGRIRLLRAEEEIELARKIADLLELERVYDQLAETLQRDPQDAEWAEAVD 120
Query: 310 LSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKF 369
+ Q +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 121 MPLPKFQRRLHIGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKF 180
Query: 370 KPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPT 429
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT
Sbjct: 181 DHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPT 240
Query: 430 KEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQL 489
+EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+ V+K L
Sbjct: 241 EEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDEVSKSL 299
Query: 490 MRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
+R ++L TL+ RER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 300 LREDLESVLGTLSARERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLR 359
>Q7VD88_PROMA (tr|Q7VD88) RNA polymerase sigma factor OS=Prochlorococcus marinus
(strain SARG / CCMP1375 / SS120) GN=rpoD PE=3 SV=1
Length = 438
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 219/334 (65%), Gaps = 6/334 (1%)
Query: 220 VLDDESYLTRKSDVQGRLRVEKKLK---EGLDQNDPLRMFLWGPETKKLLTFEEESQLIS 276
+ +++S + +D + R + +K +G+ D +R++L +LL +EE +L
Sbjct: 94 IQNNDSLIGDLTDAEAREKALASIKLGPKGVYTEDSIRVYLQEIGRIRLLRPDEEIELAR 153
Query: 277 QIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRM 336
+I +L LEE+ I+ +S+ G PT EWA V + + +L R+KEK++ +NLR+
Sbjct: 154 KIADLLHLEELAIQFESEHGNYPTKKEWAALVNMPMARFRRRLMLARRAKEKMVQSNLRL 213
Query: 337 VVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLH 396
VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +F++YA WWIRQ I RA+
Sbjct: 214 VVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQ 273
Query: 397 SRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLS 456
SRTIRLP ++Y + ++ + K ++E P++EE+A + +T++KL + +A++P+S
Sbjct: 274 SRTIRLPVHLYETISRIKKTTKVLSQEFGRKPSEEEIAESMEMTIEKLRFIAKSAQLPIS 333
Query: 457 MQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGI 515
++ + ++D+ + I +D+ E P++ VAK L+R +L TL+PRER ++RLR+G+
Sbjct: 334 LETPIGKEEDSRLGDFIESDS--ENPELDVAKTLLREDLEGVLATLSPRERDVLRLRYGL 391
Query: 516 EDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
+DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 392 DDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLR 425
>F2HHX7_9CRYP (tr|F2HHX7) RNA-polymerase sigma factor OS=Cryptomonas paramecium
GN=rpoD PE=4 SV=1
Length = 414
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 125/302 (41%), Positives = 200/302 (66%), Gaps = 1/302 (0%)
Query: 250 NDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVG 309
+D +R +L KLL EEE QL +I L + E +K+ L+ + GREPT EW+
Sbjct: 83 DDSVRWYLQLIGKVKLLKPEEEIQLAREISQLLQWEHIKVFLKEKLGREPTALEWSAACK 142
Query: 310 LS-CYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEK 368
+S +T L + ++KE++I ANLR+VV +AK Y RG+S QDL+QEGS+GL+++ EK
Sbjct: 143 ISDVQKFKTVLYNSRKAKERMIAANLRLVVSIAKRYSNRGMSLQDLVQEGSLGLIRATEK 202
Query: 369 FKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHP 428
F + G +F++YA WWI+Q++ RA+ HSRTIRLP ++Y L + + + E P
Sbjct: 203 FDSEKGFKFSTYATWWIKQSVSRAIADHSRTIRLPVHLYDTLSAIKKTTRILTIELGRSP 262
Query: 429 TKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQ 488
T+EE+A K+ VTVDKL +L +A+ LS+++ + D DT + E+PD +V K
Sbjct: 263 TEEEIACKMDVTVDKLRSVLQSAQPTLSLEKPIKNDGDTAQLSDFIEADQESPDEHVEKS 322
Query: 489 LMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKL 548
++R R+++++L+ RER +IR+R+G++DG ++L EIG +F +++ERVRQ+E++A+ KL
Sbjct: 323 MLRDDLRDVINSLSLRERDVIRMRYGLDDGKIRTLEEIGQIFSVTRERVRQIEAKAIRKL 382
Query: 549 KQ 550
+Q
Sbjct: 383 RQ 384
>K7W4G2_9NOST (tr|K7W4G2) RNA polymerase sigma factor OS=Anabaena sp. 90 GN=sigA
PE=3 SV=1
Length = 391
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 121/310 (39%), Positives = 201/310 (64%), Gaps = 1/310 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL +EE +L +I L LE + RL + R+P +EWA V L
Sbjct: 81 DSIRLYLQEIGRIRLLRADEEIELARKIAELLELERARERLCERLERDPRDSEWAAEVSL 140
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
+ +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 141 PLPTFRYRLHVGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 200
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 201 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTE 260
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+ V+K L+
Sbjct: 261 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDQVSKNLL 319
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R +L +L+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 320 REDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 379
Query: 551 CLASHGLDAY 560
+ L Y
Sbjct: 380 PNRNSVLKEY 389
>M4DQ26_BRARP (tr|M4DQ26) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra018617 PE=4 SV=1
Length = 573
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 123/314 (39%), Positives = 191/314 (60%)
Query: 247 LDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWAD 306
+D NDPLR + KLLT EE QL IQ+L +LE ++ L + G +PT+A+WA
Sbjct: 252 IDNNDPLRYLRMTTSSSKLLTAREEQQLSEGIQDLLKLERLQAELTERCGHQPTLAQWAS 311
Query: 307 GVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSV 366
G+ L+ ++ GT+ K+++I +N+R+V+ +AKNY G G+ FQDL+QEG GL++
Sbjct: 312 AAGIDKKTLRKRITHGTQCKDRMIKSNIRLVISIAKNYQGAGMDFQDLVQEGCRGLVRGA 371
Query: 367 EKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNV 426
EKF G +F++YA+WWI+Q +R++L SR IRLP ++ ++ EA+K E
Sbjct: 372 EKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGK 431
Query: 427 HPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVA 486
P EE+A G+++ +L +L + + P S+ Q + + + E+ +D ET + +
Sbjct: 432 QPKNEEVAEATGLSMKRLMAVLLSPKPPRSLDQKIGINLNLKPSEVISDPEAETSEDILM 491
Query: 487 KQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALD 546
KQ MR +L +L RE+++IR RFG+EDG K+L EIG G+S+ERVRQ+ES A
Sbjct: 492 KQFMREDLDKVLDSLGTREKQVIRWRFGMEDGRMKTLQEIGETMGVSRERVRQIESSAFR 551
Query: 547 KLKQCLASHGLDAY 560
KLK ++ L Y
Sbjct: 552 KLKNKKRNNHLQQY 565
>A5GSD3_SYNR3 (tr|A5GSD3) RNA polymerase sigma factor OS=Synechococcus sp.
(strain RCC307) GN=rpoD PE=3 SV=1
Length = 401
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 125/307 (40%), Positives = 203/307 (66%), Gaps = 3/307 (0%)
Query: 245 EGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEW 304
+G+ D +R++L +LL +EE +L +I +L LEE+ + + G+ P EW
Sbjct: 85 KGVYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLHLEELADQYEEDHGKYPDNREW 144
Query: 305 ADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMK 364
A V + + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL++
Sbjct: 145 AVLVDMPPIKFRRRLMLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIR 204
Query: 365 SVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREG 424
+ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 205 AAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEF 264
Query: 425 NVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDV 483
PT+EE+A + +T++KL + +A++P+S++ + ++D+ + I AD IE PD
Sbjct: 265 GRKPTEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEAD--IENPDQ 322
Query: 484 YVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESR 543
VAK L+R +L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++
Sbjct: 323 DVAKNLLREDLEGVLATLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAK 382
Query: 544 ALDKLKQ 550
AL KL+
Sbjct: 383 ALLKLRH 389
>B8HPM3_CYAP4 (tr|B8HPM3) RNA polymerase sigma factor OS=Cyanothece sp. (strain
PCC 7425 / ATCC 29141) GN=Cyan7425_1514 PE=3 SV=1
Length = 378
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/299 (39%), Positives = 200/299 (66%), Gaps = 1/299 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL +EE +L +I +L LE ++ +L + REP EWA V +
Sbjct: 68 DSIRLYLQEIGRIRLLRADEEIELARKIADLLELERIREQLYDKLDREPQDQEWAGEVDM 127
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
+ + +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 128 PLQSFRHRLHIGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 187
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 188 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTE 247
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+ V+K L+
Sbjct: 248 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDQVSKNLL 306
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
R +L TL+PRER +++LR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 307 REDLETVLCTLSPRERDVLKLRYGLDDGRMKTLEEIGQLFNVTRERIRQIEAKALRKLR 365
>L8M7W7_9CYAN (tr|L8M7W7) RNA polymerase sigma factor OS=Xenococcus sp. PCC 7305
GN=Xen7305DRAFT_00040560 PE=3 SV=1
Length = 380
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 125/311 (40%), Positives = 207/311 (66%), Gaps = 3/311 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL EEE +L +I +L LE ++ R++ + RE + AEW V +
Sbjct: 70 DSIRIYLQEIGRIRLLRAEEEIELARKIADLLELERIRERIEDELDREISDAEWGKEVDM 129
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
+ +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 130 ELRPFRRRLFLGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 189
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 190 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMGRKPTE 249
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQL 489
EE+A ++ +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K L
Sbjct: 250 EEIAERMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDQVSKSL 307
Query: 490 MRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
+R N+L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 308 LREDLENVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLR 367
Query: 550 QCLASHGLDAY 560
+ L Y
Sbjct: 368 HPNRNSILKEY 378
>A2C7M0_PROM3 (tr|A2C7M0) RNA polymerase sigma factor OS=Prochlorococcus marinus
(strain MIT 9303) GN=P9303_07291 PE=3 SV=1
Length = 444
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 124/307 (40%), Positives = 202/307 (65%), Gaps = 3/307 (0%)
Query: 245 EGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEW 304
+G+ D +R++L +LL +EE +L +I +L LEE+ + S G P EW
Sbjct: 128 KGVYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLHLEELAEQFNSDHGHYPNNKEW 187
Query: 305 ADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMK 364
A V + + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL++
Sbjct: 188 AALVEMPNIKFRRRLMLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIR 247
Query: 365 SVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREG 424
+ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 248 AAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEF 307
Query: 425 NVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDV 483
PT+EE+A + +T++KL + +A++P+S++ + ++D+ + I +DT E P+
Sbjct: 308 GRKPTEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDT--ENPEQ 365
Query: 484 YVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESR 543
VAK L+R +L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++
Sbjct: 366 DVAKNLLREDLEGVLATLSPRERDVLRLRYGLDDGRMKTLEEIGQIFEVTRERIRQIEAK 425
Query: 544 ALDKLKQ 550
AL KL+
Sbjct: 426 ALRKLRH 432
>B1X5Q2_PAUCH (tr|B1X5Q2) RNA polymerase sigma factor OS=Paulinella chromatophora
GN=rpoDI PE=4 SV=1
Length = 460
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 129/330 (39%), Positives = 212/330 (64%), Gaps = 6/330 (1%)
Query: 224 ESYLTRKSDVQGRLRVEKKLK---EGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQN 280
ES +T D + + +K +G+ D +R++L +LL +EE +L +I +
Sbjct: 120 ESKITDVDDKDAKAKALASIKIGPKGVYTEDSIRVYLQEIGRIRLLRPDEEIELARKISD 179
Query: 281 LFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHV 340
L LEE+ + + + G P EWA V +S + +L G R+K K++ +NLR+VV +
Sbjct: 180 LLYLEELAGQFEGRKGYYPDNKEWAALVEMSLIKFRRRLMLGRRAKAKMVQSNLRLVVSI 239
Query: 341 AKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTI 400
AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +F++YA WWIRQ I RA+ SRTI
Sbjct: 240 AKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTI 299
Query: 401 RLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQT 460
RLP ++Y + ++ + K ++E PT+EE+A + +T++KL + +A++P+S++
Sbjct: 300 RLPVHLYETISRIKKTTKVLSQEFGRKPTEEEIAESMEMTIEKLRFIAKSAQLPISLETP 359
Query: 461 VWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGY 519
+ ++D+ + I AD IE P+ VAK L+R +L TL+PRER ++RLR+G++DG
Sbjct: 360 IGKEEDSRLGDFIEAD--IENPEQDVAKNLLREDLEGVLATLSPRERDVLRLRYGLDDGR 417
Query: 520 EKSLSEIGTVFGLSKERVRQLESRALDKLK 549
K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 418 MKTLEEIGQIFDVTRERIRQIEAKALRKLR 447
>M0STE2_MUSAM (tr|M0STE2) Uncharacterized protein OS=Musa acuminata subsp.
malaccensis PE=4 SV=1
Length = 201
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 160/204 (78%), Gaps = 4/204 (1%)
Query: 363 MKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNR 422
MKS+EKFKP AGCRF +Y+YWWIRQ+IR+A+F +SR IRLP+N+Y L ++ A++ +
Sbjct: 1 MKSLEKFKPNAGCRFPTYSYWWIRQSIRKAIFQNSRIIRLPDNIYAFLKEIKYARRLCIQ 60
Query: 423 EGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPD 482
EG + PT EE+A+++G+TV KLE LL R P+S+Q+ W Q+ T+QEITAD +E PD
Sbjct: 61 EGRL-PTNEEIAKRVGITVKKLEKLLLYFRDPVSIQEHAW--QNVTFQEITADPGVEIPD 117
Query: 483 VYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLES 542
+ VAKQLMR+H R++L TL P+ER+II+ RFG+ + +K+LSEIG ++GLS ER+RQLES
Sbjct: 118 LIVAKQLMRQHVRDILKTLKPKERKIIQYRFGMHENKKKTLSEIGDIYGLSNERIRQLES 177
Query: 543 RALDKLKQ-CLASHGLDAYANLLV 565
RAL+KLK+ CL + GL AY +LLV
Sbjct: 178 RALNKLKEWCLTTQGLKAYRDLLV 201
>B0CDC4_ACAM1 (tr|B0CDC4) RNA polymerase sigma factor OS=Acaryochloris marina
(strain MBIC 11017) GN=rpoD PE=3 SV=1
Length = 371
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 120/310 (38%), Positives = 202/310 (65%), Gaps = 1/310 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL +EE +L +I +L LE + L + REP + EWA V +
Sbjct: 61 DSIRLYLQEIGRIRLLRADEEIELARKIADLLELERIYDDLFDRLEREPQLQEWALEVDM 120
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
+ +L +G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 121 PLNRFRHRLHAGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 180
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 181 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTE 240
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+ V+K L+
Sbjct: 241 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDQVSKSLL 299
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R +L TL+PRER +++LR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 300 REDLETVLDTLSPRERDVLKLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 359
Query: 551 CLASHGLDAY 560
+ L Y
Sbjct: 360 PNRNSVLKEY 369
>Q710C3_SPIOL (tr|Q710C3) Sigma factor OS=Spinacia oleracea GN=sig2 PE=2 SV=2
Length = 575
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 121/314 (38%), Positives = 194/314 (61%)
Query: 247 LDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWAD 306
+D +DPLR + +LLT EE++L + IQ+L +LE++ L+ +FG+ P+ +WA
Sbjct: 259 VDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLHDELKVRFGKSPSFVQWAA 318
Query: 307 GVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSV 366
G+ L+ +L GT K+K+I +N+R+V+ +AKNY G G++ QDL+QEG GL++
Sbjct: 319 AAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRGA 378
Query: 367 EKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNV 426
EKF G +F++YA+WWI+Q +R++L SRTIRLP ++ ++ EA+K E
Sbjct: 379 EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGK 438
Query: 427 HPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVA 486
P EE+A G+++ +L +L + P S+ Q + + + E+ AD ET + +
Sbjct: 439 QPNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLKPSEVIADPEAETAEDLLT 498
Query: 487 KQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALD 546
KQ MR+ +L TL+ RE+++IR RFG+EDG K+L EIG + G+S+ER+RQ+ES A
Sbjct: 499 KQFMRQDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFR 558
Query: 547 KLKQCLASHGLDAY 560
KL+ + L Y
Sbjct: 559 KLQNKKKTINLQQY 572
>A9RG56_PHYPA (tr|A9RG56) Uncharacterized protein OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_113461 PE=4 SV=1
Length = 581
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 118/310 (38%), Positives = 197/310 (63%), Gaps = 9/310 (2%)
Query: 250 NDPLRMFLWGPETKKLLTFEEESQLISQIQ--NLFR-------LEEVKIRLQSQFGREPT 300
+DP+ +L + KLLT EE L +IQ LFR LE+V+ LQ GREPT
Sbjct: 257 SDPICSYLRDVKNSKLLTAFEEVALSRKIQVTTLFRFRQYTLKLEKVRAELQRDMGREPT 316
Query: 301 MAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSM 360
+EW+ VG++ + +++ G +K+KL+++NLR+VV + KNY GRG++ DL+Q GS+
Sbjct: 317 RSEWSLAVGMNQTLFELRIKEGQCAKDKLVNSNLRLVVSIVKNYQGRGMTLPDLIQRGSL 376
Query: 361 GLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFY 420
GL++ EKF P+ G +F++YA WWIRQ + R++ SR IRLP ++Y ++ ++ +++
Sbjct: 377 GLIRGAEKFDPEMGFKFSTYATWWIRQAVTRSITDQSRIIRLPVHIYEVISRINKSRMMI 436
Query: 421 NREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIET 480
+ EE+A +G++V+KL+ +L +AR+P SM Q + D+D E+ AD +
Sbjct: 437 AEDQGRQARDEEVATAVGISVEKLDFILKSARLPASMDQLIGRDKDLPLWEMVADKGFNS 496
Query: 481 PDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQL 540
D ++ +++++ +L TL+P ER ++RLRFG++D +L +IG F +++ER+RQ+
Sbjct: 497 ADDFLTNEVLKQDIDGVLQTLSPTEREVLRLRFGLDDAQSMTLKDIGIFFKVTRERIRQI 556
Query: 541 ESRALDKLKQ 550
E RAL KL+
Sbjct: 557 EVRALRKLRH 566
>K4AY41_SOLLC (tr|K4AY41) Uncharacterized protein OS=Solanum lycopersicum
GN=Solyc01g081490.2 PE=4 SV=1
Length = 613
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 123/316 (38%), Positives = 192/316 (60%)
Query: 247 LDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWAD 306
+D +DPLR + +LLT EE +L IQ+L +LE +++ L + G +PT +WA
Sbjct: 297 VDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQWAA 356
Query: 307 GVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSV 366
G+ L+ +L G K+K+I +N+R+V+ +AKNY G G++ QDL+QEG GL++
Sbjct: 357 AAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGA 416
Query: 367 EKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNV 426
EKF G +F++YA+WWI+Q +R++L SRTIRLP ++ ++ EA+K E
Sbjct: 417 EKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLTENGR 476
Query: 427 HPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVA 486
HP E+A G+++ +L ++ + P S+ Q V ++ E+ AD ET + +
Sbjct: 477 HPNDAEVAEATGLSMKRLAAVMLTPKAPRSLDQKVGFNESLKPSEVLADPDAETSEEILT 536
Query: 487 KQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALD 546
KQ MR+ +L TLNPRE++++R RFG+EDG K+L EIG + G+S+ER+RQ+ES A
Sbjct: 537 KQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFR 596
Query: 547 KLKQCLASHGLDAYAN 562
KLK + L Y N
Sbjct: 597 KLKNKKRTKFLQQYIN 612
>L8LPU5_9CHRO (tr|L8LPU5) RNA polymerase sigma factor OS=Gloeocapsa sp. PCC 73106
GN=GLO73106DRAFT_00034750 PE=3 SV=1
Length = 376
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 125/312 (40%), Positives = 205/312 (65%), Gaps = 3/312 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL EEE +L +I +L LE+ + +L + R P EWA V +
Sbjct: 66 DSIRIYLQEIGRIRLLRAEEEIELARKIADLLELEQKREKLWQELKRIPNDREWAASVEM 125
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
A + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 126 ELPAFRRRLYLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 185
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 186 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMGRKPTE 245
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQL 489
EE+A + +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K L
Sbjct: 246 EEIATHMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDDVSKNL 303
Query: 490 MRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
+R ++L +L+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 304 LREDLEHVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLR 363
Query: 550 QCLASHGLDAYA 561
+ L Y
Sbjct: 364 HPNRNSILKEYV 375
>A3Z5L5_9SYNE (tr|A3Z5L5) RNA polymerase sigma factor OS=Synechococcus sp. RS9917
GN=RS9917_09721 PE=3 SV=1
Length = 456
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 205/306 (66%), Gaps = 3/306 (0%)
Query: 245 EGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEW 304
+G+ D +R++L +LL +EE +L +I +L LEE+ + +S GREP EW
Sbjct: 140 KGVYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLLLEELAAQFESDNGREPDTKEW 199
Query: 305 ADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMK 364
A V + + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL++
Sbjct: 200 AALVEMPVIKFRRRLMLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIR 259
Query: 365 SVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREG 424
+ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 260 AAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEF 319
Query: 425 NVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDV 483
PT+EE+A + +T++KL + +A++P+S++ + ++D+ + I AD IE P+
Sbjct: 320 GRKPTEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEAD--IENPEQ 377
Query: 484 YVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESR 543
VAK L+R +L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++
Sbjct: 378 DVAKNLLREDLEGVLATLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAK 437
Query: 544 ALDKLK 549
AL KL+
Sbjct: 438 ALRKLR 443
>Q5N3Q1_SYNP6 (tr|Q5N3Q1) RNA polymerase sigma factor OS=Synechococcus sp.
(strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rpoD1
PE=3 SV=1
Length = 399
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 201/301 (66%), Gaps = 3/301 (0%)
Query: 250 NDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVG 309
D +R++L +LL +EE +L QI +L LE ++ L Q R P+ AEWA V
Sbjct: 88 EDSIRLYLQEIGRIRLLRADEEIELARQIADLLALERIRDELLEQLDRLPSDAEWAAAVD 147
Query: 310 LSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKF 369
+ +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 148 SPLDEFRRRLFRGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKF 207
Query: 370 KPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPT 429
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT
Sbjct: 208 DHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPT 267
Query: 430 KEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQ 488
+EE+A ++ +T++KL + +A++P+S++ + ++D+ + I AD ETP+ VAK
Sbjct: 268 EEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVAKN 325
Query: 489 LMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKL 548
L+R +L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL
Sbjct: 326 LLREDLEGVLSTLSPRERDVLRLRYGLDDGRMKTLEEIGQLFNVTRERIRQIEAKALRKL 385
Query: 549 K 549
+
Sbjct: 386 R 386
>K9SJF8_9CYAN (tr|K9SJF8) RNA polymerase sigma factor OS=Pseudanabaena sp. PCC
7367 GN=Pse7367_1641 PE=3 SV=1
Length = 412
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/303 (39%), Positives = 201/303 (66%), Gaps = 5/303 (1%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFG----REPTMAEWAD 306
D +R++L +LL +EE +L +I +L LE+ + L ++ G E + ++WA
Sbjct: 98 DSIRLYLQEIGRIRLLRADEEIELARKIADLLELEQQREELANEMGLDDPEEVSDSDWAV 157
Query: 307 GVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSV 366
V + + +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++
Sbjct: 158 KVDMPLPRFRRRLYEGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAA 217
Query: 367 EKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNV 426
EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 218 EKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGR 277
Query: 427 HPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVA 486
PT+EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETPD VA
Sbjct: 278 KPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPDDQVA 336
Query: 487 KQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALD 546
K L+R N+L TL+PRER +++LR+G++DG K+L EIG +F +++ER+RQ+E++AL
Sbjct: 337 KNLLREDLENVLGTLSPRERDVLKLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALR 396
Query: 547 KLK 549
KL+
Sbjct: 397 KLR 399
>K1X4L7_SPIPL (tr|K1X4L7) RNA polymerase sigma factor OS=Arthrospira platensis C1
GN=SPLC1_S360460 PE=3 SV=1
Length = 372
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/320 (38%), Positives = 209/320 (65%), Gaps = 1/320 (0%)
Query: 230 KSDVQGRLRVEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKI 289
K+ G+ R + K+ D +R++L +LL +EE +L +I +L LE ++
Sbjct: 41 KAGSAGKSRRRAQTKKKHYTEDSIRLYLQEIGRIRLLRADEEIELARKIADLLELERIRE 100
Query: 290 RLQSQFGREPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGL 349
+L + REP EWA+ V + + +L G R+K+K++ +NLR+VV +AK Y+ RGL
Sbjct: 101 KLIEHYHREPNEKEWANAVDMRLPEFRRRLFLGRRAKDKMVQSNLRLVVSIAKKYMNRGL 160
Query: 350 SFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTL 409
SFQDL+QEGS+GL+++ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y
Sbjct: 161 SFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYET 220
Query: 410 LGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTY 469
+ ++ + K ++E PT+EE+A ++ +T++KL + +A++P+S++ + ++D+
Sbjct: 221 ISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRL 280
Query: 470 QEITADTAIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTV 529
+ ETP+ V+K L+R ++L TL+PRER ++RLR+G++DG K+L EIG +
Sbjct: 281 GDFIESDG-ETPEDQVSKNLLREDLESVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQI 339
Query: 530 FGLSKERVRQLESRALDKLK 549
F +++ER+RQ+E++AL KL+
Sbjct: 340 FNVTRERIRQIEAKALRKLR 359
>H1WE70_9CYAN (tr|H1WE70) RNA polymerase sigma factor OS=Arthrospira sp. PCC 8005
GN=rpoD PE=3 SV=1
Length = 387
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/331 (37%), Positives = 212/331 (64%), Gaps = 1/331 (0%)
Query: 230 KSDVQGRLRVEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKI 289
K+ G+ R + K+ D +R++L +LL +EE +L +I +L LE ++
Sbjct: 56 KAGSAGKSRRRAQTKKKHYTEDSIRLYLQEIGRIRLLRADEEIELARKIADLLELERIRE 115
Query: 290 RLQSQFGREPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGL 349
+L + REP EWA+ V + + +L G R+K+K++ +NLR+VV +AK Y+ RGL
Sbjct: 116 KLIEHYHREPNEKEWANAVDMRLPEFRRRLFLGRRAKDKMVQSNLRLVVSIAKKYMNRGL 175
Query: 350 SFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTL 409
SFQDL+QEGS+GL+++ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y
Sbjct: 176 SFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYET 235
Query: 410 LGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTY 469
+ ++ + K ++E PT+EE+A ++ +T++KL + +A++P+S++ + ++D+
Sbjct: 236 ISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRL 295
Query: 470 QEITADTAIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTV 529
+ ETP+ V+K L+R ++L TL+PRER ++RLR+G++DG K+L EIG +
Sbjct: 296 GDFIESDG-ETPEDQVSKNLLREDLESVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQI 354
Query: 530 FGLSKERVRQLESRALDKLKQCLASHGLDAY 560
F +++ER+RQ+E++AL KL+ + L Y
Sbjct: 355 FNVTRERIRQIEAKALRKLRHPNRNSILKEY 385
>B5VWQ7_SPIMA (tr|B5VWQ7) RNA polymerase sigma factor OS=Arthrospira maxima
CS-328 GN=AmaxDRAFT_0949 PE=3 SV=1
Length = 387
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/331 (37%), Positives = 212/331 (64%), Gaps = 1/331 (0%)
Query: 230 KSDVQGRLRVEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKI 289
K+ G+ R + K+ D +R++L +LL +EE +L +I +L LE ++
Sbjct: 56 KAGSAGKSRRRAQTKKKHYTEDSIRLYLQEIGRIRLLRADEEIELARKIADLLELERIRE 115
Query: 290 RLQSQFGREPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGL 349
+L + REP EWA+ V + + +L G R+K+K++ +NLR+VV +AK Y+ RGL
Sbjct: 116 KLIEHYHREPNEKEWANAVDMRLPEFRRRLFLGRRAKDKMVQSNLRLVVSIAKKYMNRGL 175
Query: 350 SFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTL 409
SFQDL+QEGS+GL+++ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y
Sbjct: 176 SFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYET 235
Query: 410 LGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTY 469
+ ++ + K ++E PT+EE+A ++ +T++KL + +A++P+S++ + ++D+
Sbjct: 236 ISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRL 295
Query: 470 QEITADTAIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTV 529
+ ETP+ V+K L+R ++L TL+PRER ++RLR+G++DG K+L EIG +
Sbjct: 296 GDFIESDG-ETPEDQVSKNLLREDLESVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQI 354
Query: 530 FGLSKERVRQLESRALDKLKQCLASHGLDAY 560
F +++ER+RQ+E++AL KL+ + L Y
Sbjct: 355 FNVTRERIRQIEAKALRKLRHPNRNSILKEY 385
>A0YTZ3_LYNSP (tr|A0YTZ3) RNA polymerase sigma factor OS=Lyngbya sp. (strain PCC
8106) GN=L8106_10432 PE=3 SV=1
Length = 391
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/299 (39%), Positives = 199/299 (66%), Gaps = 1/299 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL +EE +L +I +L LE ++ +L EP EWA V +
Sbjct: 81 DSIRLYLQEIGRIRLLRADEEIELARRIADLLELERIREKLVEHNHCEPEDREWASAVDM 140
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
+ + +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 141 ALPEFRRRLYLGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 200
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 201 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTE 260
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+ V+K L+
Sbjct: 261 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDQVSKNLL 319
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
R ++L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 320 REDLESVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLR 378
>K6DHZ3_SPIPL (tr|K6DHZ3) RNA polymerase sigma factor OS=Arthrospira platensis
str. Paraca GN=APPUASWS_21888 PE=3 SV=1
Length = 387
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/310 (39%), Positives = 204/310 (65%), Gaps = 1/310 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL +EE +L +I +L LE ++ +L + REP EWA+ V +
Sbjct: 77 DSIRLYLQEIGRIRLLRADEEIELARKIADLLELERIREKLIEHYHREPNEKEWANAVDM 136
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
+ +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 137 RLPEFRRRLFLGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 196
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 197 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTE 256
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+ V+K L+
Sbjct: 257 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDQVSKNLL 315
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R ++L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 316 REDLESVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 375
Query: 551 CLASHGLDAY 560
+ L Y
Sbjct: 376 PNRNSILKEY 385
>D5A0H0_SPIPL (tr|D5A0H0) RNA polymerase sigma factor OS=Arthrospira platensis
NIES-39 GN=sigA PE=3 SV=1
Length = 387
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/310 (39%), Positives = 204/310 (65%), Gaps = 1/310 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL +EE +L +I +L LE ++ +L + REP EWA+ V +
Sbjct: 77 DSIRLYLQEIGRIRLLRADEEIELARKIADLLELERIREKLIEHYHREPNEKEWANAVDM 136
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
+ +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 137 RLPEFRRRLFLGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 196
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 197 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRKPTE 256
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+ V+K L+
Sbjct: 257 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDQVSKNLL 315
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R ++L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 316 REDLESVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 375
Query: 551 CLASHGLDAY 560
+ L Y
Sbjct: 376 PNRNSILKEY 385
>Q9MTH3_SINAL (tr|Q9MTH3) Sigma factor 2 (Precursor) OS=Sinapis alba GN=sig2 PE=2
SV=1
Length = 575
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/303 (39%), Positives = 188/303 (62%)
Query: 247 LDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWAD 306
+D NDPLR + KLLT EE QL IQ+L +LE ++ L + G +PT ++WA
Sbjct: 254 IDHNDPLRYLRMTTSSSKLLTAREEQQLSEGIQDLLKLERLQAELTERCGHQPTFSQWAS 313
Query: 307 GVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSV 366
G+ L+ ++ GT+ K+++I +N+R+V+ +AKNY G G+ FQDL+QEG GL++
Sbjct: 314 AAGVDKKTLRKRITHGTQCKDRMIKSNIRLVISIAKNYQGAGMDFQDLVQEGCRGLVRGA 373
Query: 367 EKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNV 426
EKF G +F++YA+WWI+Q +R++L SR IRLP ++ ++ EA+K E
Sbjct: 374 EKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGK 433
Query: 427 HPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVA 486
P EE+A G+++ +L +L + + P S+ Q + + + E+ AD ET + +
Sbjct: 434 QPKNEEVAEATGLSMKRLMAVLLSPKPPRSLDQKIGINLNLKPSEVIADPEAETSEDILM 493
Query: 487 KQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALD 546
KQ MR+ +L +L+ RE+++IR RFG+EDG K+L EIG G+S+ERVRQ+++ A
Sbjct: 494 KQFMRQDLDKVLDSLSTREKQVIRWRFGMEDGRMKTLQEIGETMGVSRERVRQIDTSAFR 553
Query: 547 KLK 549
KLK
Sbjct: 554 KLK 556
>M4EPL2_BRARP (tr|M4EPL2) Uncharacterized protein OS=Brassica rapa subsp.
pekinensis GN=Bra030732 PE=4 SV=1
Length = 570
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/314 (38%), Positives = 192/314 (61%)
Query: 247 LDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWAD 306
+D NDPLR + KLLT EE++L IQ+L +LE +++ L + G +PT +WA
Sbjct: 253 IDHNDPLRYLRMTTSSSKLLTAREETELSEGIQDLLKLERLQVELTERCGHQPTFGQWAS 312
Query: 307 GVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSV 366
G+ L+ ++ GT+ K+++I +N+R+V+ +AKNY G G++ QDL+QEG GL++
Sbjct: 313 AAGVDQKTLRKRINHGTQCKDRMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGA 372
Query: 367 EKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNV 426
EKF G +F++YA+WWI+Q +R++L SR IRLP ++ ++ EA+K E
Sbjct: 373 EKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGQ 432
Query: 427 HPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVA 486
P EE+A G+++ +L +L A + P S+ Q + + + E+ +D ET + +
Sbjct: 433 KPKNEEVAEATGLSMKRLMAVLLAPKPPRSLDQKIGINLNLKPSEVISDPEAETSEDILI 492
Query: 487 KQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALD 546
KQ MR +L +L+ RE+++IR RFG+EDG K+L EIG G+S+ERVRQ+ES A
Sbjct: 493 KQFMREDLDKVLDSLSTREKQVIRWRFGMEDGRMKTLQEIGETMGVSRERVRQIESSAFR 552
Query: 547 KLKQCLASHGLDAY 560
KLK ++ L Y
Sbjct: 553 KLKNKKRNNHLQQY 566
>K9UM88_9CHRO (tr|K9UM88) RNA polymerase sigma factor OS=Chamaesiphon minutus PCC
6605 GN=Cha6605_4648 PE=3 SV=1
Length = 380
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/315 (39%), Positives = 208/315 (66%), Gaps = 5/315 (1%)
Query: 236 RLRVEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQF 295
R RV+ K K+ + D +R++L +LL +EE +L +I +L LE ++ +L +
Sbjct: 57 RRRVQTKKKQFTE--DSIRLYLQEIGRIRLLRADEEIELARKIADLLELERMREKLLNDL 114
Query: 296 GREPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLL 355
REP EWA + + +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+
Sbjct: 115 DREPHDREWAAVASMPLNQFRHRLFLGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLI 174
Query: 356 QEGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIE 415
QEGS+GL+++ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ +
Sbjct: 175 QEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKK 234
Query: 416 AKKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITA 474
K ++E PT+EE+A ++ +T++KL + +A++P+S++ + ++D+ + I A
Sbjct: 235 TTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEA 294
Query: 475 DTAIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSK 534
D E P+ V+K L+R +L TL+PRER ++RLR+G++DG K+L EIG +F +++
Sbjct: 295 DG--EMPEDQVSKSLLREDLEGVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTR 352
Query: 535 ERVRQLESRALDKLK 549
ER+RQ+E++AL KL+
Sbjct: 353 ERIRQIEAKALRKLR 367
>Q05RP2_9SYNE (tr|Q05RP2) RNA polymerase sigma factor OS=Synechococcus sp. RS9916
GN=RS9916_27044 PE=3 SV=1
Length = 479
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/317 (40%), Positives = 208/317 (65%), Gaps = 3/317 (0%)
Query: 245 EGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEW 304
+G+ D +R++L +LL +EE +L +I +L LEE+ + +S GREP EW
Sbjct: 163 KGVYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLLLEELAAQFESDNGREPDTKEW 222
Query: 305 ADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMK 364
A V + + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL++
Sbjct: 223 AALVEMPLIKFRRRLMLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIR 282
Query: 365 SVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREG 424
+ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 283 AAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEF 342
Query: 425 NVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDV 483
PT+EE+A + +T++KL + +A++P+S++ + ++D+ + I AD IE P+
Sbjct: 343 GRKPTEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEAD--IENPEQ 400
Query: 484 YVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESR 543
VAK L+R +L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++
Sbjct: 401 DVAKNLLREDLEGVLATLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAK 460
Query: 544 ALDKLKQCLASHGLDAY 560
AL KL+ + L Y
Sbjct: 461 ALRKLRHPNRNGVLKEY 477
>Q98RZ3_GUITH (tr|Q98RZ3) RNA-polymerase sigma factor OS=Guillardia theta GN=rpoD
PE=4 SV=1
Length = 460
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/322 (38%), Positives = 207/322 (64%), Gaps = 6/322 (1%)
Query: 246 GLDQN-----DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPT 300
GL +N D +R +L +LL +EE QL +I L E VKI L+ + REPT
Sbjct: 103 GLSKNIQKADDSVRWYLQLIGRVRLLRPDEEIQLAREISQLLHWEHVKISLRDKLRREPT 162
Query: 301 MAEWADGVGLS-CYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGS 359
+EW +S ++ L + R+KE+++ ANLR+VV +AK Y+ RG+S QDL+QEGS
Sbjct: 163 NSEWTAACKVSDVRKFRSILHNARRAKERMVAANLRLVVSIAKRYVNRGMSLQDLIQEGS 222
Query: 360 MGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKF 419
+GL+++ EKF + G +F++YA WW++Q + RA+ HSRTIRLP ++Y + + + +
Sbjct: 223 LGLIRAAEKFDSEKGFKFSTYATWWVKQAVTRAIADHSRTIRLPVHLYDTISAIRKTTRN 282
Query: 420 YNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIE 479
N E PT+EE+A+++ ++V+KL +L +A+ LS+++ + D DT+ + E
Sbjct: 283 LNIEIGRSPTEEEIAKRMDMSVEKLRNVLQSAQPTLSLERPLKNDDDTSQLSDFIEADQE 342
Query: 480 TPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQ 539
+P+ +V K ++R N++++L+PRER ++R+R+G++DG K+L EIG +F +++ERVRQ
Sbjct: 343 SPEEHVEKSMLRDDLENVINSLSPRERDVVRMRYGLDDGRIKTLEEIGQIFSVTRERVRQ 402
Query: 540 LESRALDKLKQCLASHGLDAYA 561
+E++A+ KL+Q S L Y
Sbjct: 403 IEAKAIRKLRQPYRSSILRDYV 424
>A9BK56_HEMAN (tr|A9BK56) RpoD OS=Hemiselmis andersenii GN=HAN_1g44 PE=4 SV=1
Length = 485
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 122/313 (38%), Positives = 201/313 (64%), Gaps = 1/313 (0%)
Query: 250 NDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVG 309
+D +R +L +LL EEE QL +I L E VKI L+ + REPT +EW
Sbjct: 129 DDSVRWYLQLIGRVRLLRPEEEIQLAREISQLLHWEHVKISLREKLQREPTSSEWTAACK 188
Query: 310 LS-CYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEK 368
+S + L + R+KE+++ ANLR+VV +AK Y+ RG+S QDL+QEGS+GL+++ EK
Sbjct: 189 VSDVKKFRAILHNARRAKERMVAANLRLVVSIAKRYVNRGMSLQDLIQEGSLGLIRAAEK 248
Query: 369 FKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHP 428
F + G +F++YA WW++Q + RA+ HSRTIRLP ++Y + + + + N E P
Sbjct: 249 FDSEKGFKFSTYATWWVKQAVTRAIADHSRTIRLPVHLYDTISAIRKTTRTLNIEIGRSP 308
Query: 429 TKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQ 488
T+EE+A K+ ++V+KL +L +A+ LS+++ + D D + + E+P+ +V K
Sbjct: 309 TEEEIAEKMDMSVEKLRSVLQSAQPTLSLERPLKNDDDASQLSDFIEADQESPEEHVEKS 368
Query: 489 LMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKL 548
++R N++++L+PRER ++R+R+G++DG K+L EIG +F +++ERVRQ+E++A+ KL
Sbjct: 369 MLRDDLENVINSLSPRERDVVRMRYGLDDGRIKTLEEIGQIFSVTRERVRQIEAKAIRKL 428
Query: 549 KQCLASHGLDAYA 561
+Q S L Y
Sbjct: 429 RQPYRSSILRDYV 441
>A2BVF8_PROM5 (tr|A2BVF8) RNA polymerase sigma factor OS=Prochlorococcus marinus
(strain MIT 9515) GN=P9515_05601 PE=3 SV=1
Length = 397
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 207/305 (67%), Gaps = 3/305 (0%)
Query: 246 GLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWA 305
G+ D +R++L +LL +EE +L +I +L +LEE+ + +S+ G P++ EWA
Sbjct: 82 GIYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLQLEELATQFESEKGHFPSVREWA 141
Query: 306 DGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKS 365
+ + + + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++
Sbjct: 142 ELIDMPLSKFRRRLLLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRA 201
Query: 366 VEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGN 425
EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 202 AEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFG 261
Query: 426 VHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVY 484
P++EE+A + +T++KL + +A++P+S++ + ++D+ + I AD IE P+
Sbjct: 262 RKPSEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEAD--IENPEQD 319
Query: 485 VAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRA 544
V+K L+R +L TL+PRER ++RLR+GI+DG K+L EIG +F +++ER+RQ+E++A
Sbjct: 320 VSKTLLREDLEGVLATLSPRERDVLRLRYGIDDGRMKTLEEIGQIFDVTRERIRQIEAKA 379
Query: 545 LDKLK 549
L KL+
Sbjct: 380 LRKLR 384
>Q8S9D0_GUITH (tr|Q8S9D0) RNA polymerase sigma factor OS=Guillardia theta GN=sigA
PE=2 SV=1
Length = 490
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 122/313 (38%), Positives = 202/313 (64%), Gaps = 1/313 (0%)
Query: 250 NDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVG 309
+D +R +L +LL EEE QL +I L E VKI L+ + REPT +EW
Sbjct: 129 DDSVRWYLQLIGRVRLLRPEEEIQLAREISQLLHWEHVKISLREKLQREPTSSEWTAACK 188
Query: 310 LS-CYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEK 368
+S ++ L + R+KE+++ ANLR+VV +AK Y+ RG+S QDL+QEGS+GL+++ EK
Sbjct: 189 VSDVKKFRSILHNARRAKERMVAANLRLVVSIAKRYVNRGMSLQDLIQEGSLGLIRAAEK 248
Query: 369 FKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHP 428
F + G +F++YA WW++Q + RA+ HSRTIRLP ++Y + + + + N E P
Sbjct: 249 FDSEKGFKFSTYATWWVKQAVTRAIADHSRTIRLPVHLYDTISAIRKTTRTLNIEIGRSP 308
Query: 429 TKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQ 488
T+EE+A K+ ++V+KL +L +A+ LS+++ + D D + + E+P+ +V K
Sbjct: 309 TEEEIAEKMDMSVEKLRSVLQSAQPTLSLERPLKNDDDASQLSDFIEADQESPEEHVEKS 368
Query: 489 LMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKL 548
++R N++++L+PRER ++R+R+G++DG K+L EIG +F +++ERVRQ+E++A+ KL
Sbjct: 369 MLRDDLENVINSLSPRERDVVRMRYGLDDGRIKTLEEIGQIFSVTRERVRQIEAKAIRKL 428
Query: 549 KQCLASHGLDAYA 561
+Q S L Y
Sbjct: 429 RQPYRSSILRDYV 441
>K9Z8E6_CYAAP (tr|K9Z8E6) RNA polymerase sigma factor OS=Cyanobacterium aponinum
(strain PCC 10605) GN=Cyan10605_3382 PE=3 SV=1
Length = 386
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 131/332 (39%), Positives = 212/332 (63%), Gaps = 6/332 (1%)
Query: 220 VLDDESYLTRKSDVQGRLRVEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQ 279
V D S +RK R R + K K + D +R++L +LL EEE +L QI
Sbjct: 46 VADVSSKKSRKLSATPRRRGQSKKKPFTE--DSIRVYLQEIGRIRLLRAEEEIELARQIA 103
Query: 280 NLFRLEEVKIRLQSQFGREPTMAEWADGVGL-SCYALQTQLRSGTRSKEKLIHANLRMVV 338
+L LE ++ L GR PT EWA + + +L G ++K+K++ +NLR+VV
Sbjct: 104 DLLDLEYIRSTLIEHLGRVPTDEEWAIASDMPNMRQFNRRLHIGRKAKDKMVQSNLRLVV 163
Query: 339 HVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSR 398
+AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +F++YA WWIRQ I RA+ SR
Sbjct: 164 SIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSR 223
Query: 399 TIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQ 458
TIRLP ++Y + ++ + K +++ PT+EE+A + +T++KL + +A++P+S++
Sbjct: 224 TIRLPVHLYETISRIKKTTKMLSQKMGRKPTEEEIAEDMEMTIEKLRFIAKSAQLPISLE 283
Query: 459 QTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIED 517
+ ++D+ + I AD ETP+ V+K L+R N+L +L+PRER ++RLR+G++D
Sbjct: 284 TPIGKEEDSRLGDFIEADG--ETPEDEVSKNLLREDLENVLDSLSPRERDVLRLRYGLDD 341
Query: 518 GYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
G K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 342 GRMKTLEEIGQIFNVTRERIRQIEAKALRKLR 373
>Q31C37_PROM9 (tr|Q31C37) RNA polymerase sigma factor OS=Prochlorococcus marinus
(strain MIT 9312) GN=PMT9312_0497 PE=3 SV=1
Length = 393
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 207/305 (67%), Gaps = 3/305 (0%)
Query: 246 GLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWA 305
G+ D +R++L +LL +EE +L +I +L +LEE+ + +S+ G P++ EWA
Sbjct: 78 GIYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLQLEELATQYESEKGHFPSVREWA 137
Query: 306 DGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKS 365
+ + + + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++
Sbjct: 138 ELIDMPLSKFRRRLLLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRA 197
Query: 366 VEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGN 425
EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 198 AEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFG 257
Query: 426 VHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVY 484
P++EE+A + +T++KL + +A++P+S++ + ++D+ + I AD IE P+
Sbjct: 258 RKPSEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEAD--IENPEQD 315
Query: 485 VAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRA 544
V+K L+R +L TL+PRER ++RLR+GI+DG K+L EIG +F +++ER+RQ+E++A
Sbjct: 316 VSKTLLREDLEGVLATLSPRERDVLRLRYGIDDGRMKTLEEIGQIFDVTRERIRQIEAKA 375
Query: 545 LDKLK 549
L KL+
Sbjct: 376 LRKLR 380
>B9P0P2_PROMR (tr|B9P0P2) RNA polymerase sigma factor OS=Prochlorococcus marinus
str. MIT 9202 GN=P9202_111 PE=3 SV=1
Length = 393
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 207/305 (67%), Gaps = 3/305 (0%)
Query: 246 GLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWA 305
G+ D +R++L +LL +EE +L +I +L +LEE+ + +S+ G P++ EWA
Sbjct: 78 GIYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLQLEELATQYESEKGHFPSVREWA 137
Query: 306 DGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKS 365
+ + + + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++
Sbjct: 138 ELIDMPLSKFRRRLLLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRA 197
Query: 366 VEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGN 425
EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 198 AEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFG 257
Query: 426 VHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVY 484
P++EE+A + +T++KL + +A++P+S++ + ++D+ + I AD IE P+
Sbjct: 258 RKPSEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEAD--IENPEQD 315
Query: 485 VAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRA 544
V+K L+R +L TL+PRER ++RLR+GI+DG K+L EIG +F +++ER+RQ+E++A
Sbjct: 316 VSKTLLREDLEGVLATLSPRERDVLRLRYGIDDGRMKTLEEIGQIFDVTRERIRQIEAKA 375
Query: 545 LDKLK 549
L KL+
Sbjct: 376 LRKLR 380
>K9RSJ7_SYNP3 (tr|K9RSJ7) RNA polymerase sigma factor OS=Synechococcus sp.
(strain ATCC 27167 / PCC 6312) GN=Syn6312_1261 PE=3 SV=1
Length = 382
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 124/323 (38%), Positives = 207/323 (64%), Gaps = 8/323 (2%)
Query: 233 VQGRLRVEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQ 292
+GR R K K + D +R++L +LL +EE +L +I +L LE ++ R+
Sbjct: 51 AKGRRRATAKKKHYTE--DSIRLYLQEIGRIRLLRADEEIELARKIADLLELERIRDRIS 108
Query: 293 SQFGREPTMAE-----WADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGR 347
Q +P E WA V ++ A + +L G R+KEK++ +NLR+VV +AK Y+ R
Sbjct: 109 EQLDCDPDDLERHPEPWASEVKMTLPAFRHRLFVGRRAKEKMVQSNLRLVVSIAKKYMNR 168
Query: 348 GLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVY 407
GLSFQDL+QEGS+GL+++ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y
Sbjct: 169 GLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLY 228
Query: 408 TLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDT 467
+ ++ + K ++E PT+EE+A ++ +T++KL + +A++P+S++ + ++D+
Sbjct: 229 ETISRIKKTTKLLSQEMGRKPTEEEIAERMEMTIEKLRFIAKSAQLPISLETPIGKEEDS 288
Query: 468 TYQEITADTAIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIG 527
+ ETP+ V+K L+R +L TL+PRER +++LR+G++DG K+L EIG
Sbjct: 289 RLGDFIESDG-ETPEDQVSKHLLREDLETVLCTLSPRERDVLKLRYGLDDGRMKTLEEIG 347
Query: 528 TVFGLSKERVRQLESRALDKLKQ 550
+F +++ER+RQ+E++AL KL+
Sbjct: 348 QIFNVTRERIRQIEAKALRKLRH 370
>M1D2M3_SOLTU (tr|M1D2M3) Uncharacterized protein OS=Solanum tuberosum
GN=PGSC0003DMG400031111 PE=4 SV=1
Length = 613
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 121/316 (38%), Positives = 191/316 (60%)
Query: 247 LDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWAD 306
+D +DPLR + +LLT EE +L IQ+L +LE +++ L + G +PT +WA
Sbjct: 297 VDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQWAA 356
Query: 307 GVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSV 366
G+ L+ +L G K+K+I +N+R+V+ +AKNY G G++ QDL+QEG GL++
Sbjct: 357 AAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGA 416
Query: 367 EKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNV 426
EKF G +F++YA+WWI+Q +R++L SR IRLP ++ ++ EA+K E
Sbjct: 417 EKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLLTENGR 476
Query: 427 HPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVA 486
HP E+A G+++ +L ++ + P S+ Q + ++ E+ AD ET + +
Sbjct: 477 HPNDAEVAEAAGLSMKRLAAVMLTPKAPRSLDQKIGFNESLKPSEVLADPEAETSEEILT 536
Query: 487 KQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALD 546
KQ MR+ +L TLNPRE++++R RFG+EDG K+L EIG + G+S+ER+RQ+ES A
Sbjct: 537 KQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFR 596
Query: 547 KLKQCLASHGLDAYAN 562
KLK + L Y N
Sbjct: 597 KLKNKKRTKFLQQYIN 612
>K9YJV2_CYASC (tr|K9YJV2) RNA polymerase sigma factor OS=Cyanobacterium stanieri
(strain ATCC 29140 / PCC 7202) GN=Cyast_1251 PE=3 SV=1
Length = 391
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 122/301 (40%), Positives = 199/301 (66%), Gaps = 4/301 (1%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL EEE +L QI +L LE ++ GR PT EWA +
Sbjct: 80 DSIRVYLQEIGRIRLLRAEEEIELARQIADLLDLEYIRATQIEHLGRIPTDEEWAIACDI 139
Query: 311 -SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKF 369
+ +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 140 PNMRQFNRRLHIGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKF 199
Query: 370 KPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPT 429
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K +++ PT
Sbjct: 200 DHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKMLSQKMGRKPT 259
Query: 430 KEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQ 488
+EE+A + +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K
Sbjct: 260 EEEIAEDMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKN 317
Query: 489 LMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKL 548
L+R N+L +L+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL
Sbjct: 318 LLREDLENVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKL 377
Query: 549 K 549
+
Sbjct: 378 R 378
>A8G3L2_PROM2 (tr|A8G3L2) RNA polymerase sigma factor OS=Prochlorococcus marinus
(strain MIT 9215) GN=rpoD PE=3 SV=1
Length = 393
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 207/305 (67%), Gaps = 3/305 (0%)
Query: 246 GLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWA 305
G+ D +R++L +LL +EE +L +I +L +LEE+ + +S+ G P++ EWA
Sbjct: 78 GIYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLQLEELATQYESEKGHFPSVREWA 137
Query: 306 DGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKS 365
+ + + + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++
Sbjct: 138 ELIDMPLSKFRRRLLLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRA 197
Query: 366 VEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGN 425
EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 198 AEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFG 257
Query: 426 VHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVY 484
P++EE+A + +T++KL + +A++P+S++ + ++D+ + I AD IE P+
Sbjct: 258 RKPSEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEAD--IENPEQD 315
Query: 485 VAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRA 544
V+K L+R +L TL+PRER ++RLR+GI+DG K+L EIG +F +++ER+RQ+E++A
Sbjct: 316 VSKTLLREDLEGVLATLSPRERDVLRLRYGIDDGRMKTLEEIGQIFDVTRERIRQIEAKA 375
Query: 545 LDKLK 549
L KL+
Sbjct: 376 LRKLR 380
>Q7V2I0_PROMP (tr|Q7V2I0) RNA polymerase sigma factor OS=Prochlorococcus marinus
subsp. pastoris (strain CCMP1986 / MED4) GN=sigA PE=3
SV=1
Length = 396
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 129/336 (38%), Positives = 217/336 (64%), Gaps = 9/336 (2%)
Query: 221 LDDESYLTRKSDVQGRLRVEKKL------KEGLDQNDPLRMFLWGPETKKLLTFEEESQL 274
L+DE + K + G K + +G+ D +R++L +LL +EE +L
Sbjct: 50 LNDEGSIENKDEFNGSDEEAKAIGNVKLGPKGIYTEDSIRVYLQEIGRIRLLRPDEEIEL 109
Query: 275 ISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANL 334
+I +L +LEE+ + +S+ G P++ EWA+ + + +L G R+KEK++ +NL
Sbjct: 110 ARKIADLLQLEELATQYESEKGHFPSVREWAELTDMPLSKFRRRLLLGRRAKEKMVQSNL 169
Query: 335 RMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALF 394
R+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +F++YA WWIRQ I RA+
Sbjct: 170 RLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIA 229
Query: 395 LHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIP 454
SRTIRLP ++Y + ++ + K ++E P++EE+A + +T++KL + +A++P
Sbjct: 230 DQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPSEEEIAESMEMTIEKLRFIAKSAQLP 289
Query: 455 LSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRF 513
+S++ + ++D+ + I AD IE P+ V+K L+R +L TL+PRER ++RLR+
Sbjct: 290 ISLETPIGKEEDSRLGDFIEAD--IENPEQDVSKTLLREDLEGVLATLSPRERDVLRLRY 347
Query: 514 GIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
GI+DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 348 GIDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLR 383
>A3PBM1_PROM0 (tr|A3PBM1) RNA polymerase sigma factor OS=Prochlorococcus marinus
(strain MIT 9301) GN=P9301_05231 PE=3 SV=1
Length = 394
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 207/305 (67%), Gaps = 3/305 (0%)
Query: 246 GLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWA 305
G+ D +R++L +LL +EE +L +I +L +LEE+ + +S+ G P++ EWA
Sbjct: 79 GIYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLQLEELATQYESEKGHFPSVREWA 138
Query: 306 DGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKS 365
+ + + + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++
Sbjct: 139 ELIDMPLPKFRRRLLLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRA 198
Query: 366 VEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGN 425
EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 199 AEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFG 258
Query: 426 VHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVY 484
P++EE+A + +T++KL + +A++P+S++ + ++D+ + I AD IE P+
Sbjct: 259 RKPSEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEAD--IENPEQD 316
Query: 485 VAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRA 544
V+K L+R +L TL+PRER ++RLR+GI+DG K+L EIG +F +++ER+RQ+E++A
Sbjct: 317 VSKTLLREDLEGVLATLSPRERDVLRLRYGIDDGRMKTLEEIGQIFDVTRERIRQIEAKA 376
Query: 545 LDKLK 549
L KL+
Sbjct: 377 LRKLR 381
>A2BPX8_PROMS (tr|A2BPX8) RNA polymerase sigma factor OS=Prochlorococcus marinus
(strain AS9601) GN=A9601_05531 PE=3 SV=1
Length = 394
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 207/305 (67%), Gaps = 3/305 (0%)
Query: 246 GLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWA 305
G+ D +R++L +LL +EE +L +I +L +LEE+ + +S+ G P++ EWA
Sbjct: 79 GIYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLQLEELATQYESEKGHFPSVREWA 138
Query: 306 DGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKS 365
+ + + + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++
Sbjct: 139 ELIDMPLAKFRRRLLLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRA 198
Query: 366 VEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGN 425
EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 199 AEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFG 258
Query: 426 VHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVY 484
P++EE+A + +T++KL + +A++P+S++ + ++D+ + I AD IE P+
Sbjct: 259 RKPSEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEAD--IENPEQD 316
Query: 485 VAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRA 544
V+K L+R +L TL+PRER ++RLR+GI+DG K+L EIG +F +++ER+RQ+E++A
Sbjct: 317 VSKTLLREDLEGVLATLSPRERDVLRLRYGIDDGRMKTLEEIGQIFDVTRERIRQIEAKA 376
Query: 545 LDKLK 549
L KL+
Sbjct: 377 LRKLR 381
>R7QDV9_CHOCR (tr|R7QDV9) Stackhouse genomic scaffold, scaffold_226 OS=Chondrus
crispus GN=CHC_T00004323001 PE=4 SV=1
Length = 414
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 123/309 (39%), Positives = 189/309 (61%), Gaps = 2/309 (0%)
Query: 244 KEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAE 303
+ G +D +R +L KLL E E L +I L LE + L+ G EP + E
Sbjct: 91 RNGPATDDSIRRYLHEIGEVKLLDAESEINLAREIAKLLELERISATLKDANGFEPAIPE 150
Query: 304 WADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLM 363
WA ++ + LR G R+KE ++ ANLR+VV +AK YL RGLSFQDL+QEGS+GL+
Sbjct: 151 WAAAADMNIEVFRETLRRGLRAKEHMVAANLRLVVSIAKKYLNRGLSFQDLIQEGSIGLI 210
Query: 364 KSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNRE 423
+ EKF G +F++YA WWIRQ I RA+ HSR IRLP +V + + +A K + E
Sbjct: 211 RGAEKFDGNKGFKFSTYATWWIRQAITRAIADHSRPIRLPVHVNDTIAAIKKATKLLSTE 270
Query: 424 GNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIE--TP 481
N PT+ E+A ++ ++++KL L ++AR +S++ + D + + + E TP
Sbjct: 271 MNRSPTETEIAERLQISIEKLRFLSTSARATISLETPIGRDGKESNATLGSFIVWEGDTP 330
Query: 482 DVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLE 541
+ K L+R N+L+TL+PRER ++R+R+G +DG K+L EIG +F +++ER+RQ+E
Sbjct: 331 EESTMKSLLREDLENVLNTLSPRERDVVRMRYGFDDGKMKTLEEIGCLFAVTRERIRQIE 390
Query: 542 SRALDKLKQ 550
++AL KL+
Sbjct: 391 AKALRKLRH 399
>J7G2H9_9CRYP (tr|J7G2H9) RNA-polymerase sigma factor OS=Chroomonas
mesostigmatica CCMP1168 GN=rpoD PE=4 SV=1
Length = 485
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 122/313 (38%), Positives = 201/313 (64%), Gaps = 1/313 (0%)
Query: 250 NDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVG 309
+D +R +L +LL EEE QL +I L E VKI L+ + REPT +EW
Sbjct: 132 DDSVRWYLQLIGRVRLLRPEEEIQLAREISQLLHWEHVKISLREKLQREPTSSEWTAACK 191
Query: 310 LS-CYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEK 368
+S + L + R+KE+++ ANLR+VV +AK Y+ RG+S QDL+QEGS+GL+++ EK
Sbjct: 192 VSDVKKFRAILHNARRAKERMVAANLRLVVSIAKRYVNRGMSLQDLIQEGSLGLIRAAEK 251
Query: 369 FKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHP 428
F + G +F++YA WW++Q + RA+ HSRTIRLP ++Y + + + + N E P
Sbjct: 252 FDSEKGFKFSTYATWWVKQAVTRAIADHSRTIRLPVHLYDTISAIRKTTRTLNIEIGRSP 311
Query: 429 TKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQ 488
T+EE+A K+ ++V+KL +L +A+ LS+++ + D D + + E+P+ +V K
Sbjct: 312 TEEEIAEKMDMSVEKLRSVLQSAQPTLSLERPLKNDDDASQLSDFIEADQESPEEHVEKS 371
Query: 489 LMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKL 548
++R N++++L+PRER ++R+R+G++DG K+L EIG +F +++ERVRQ+E++A+ KL
Sbjct: 372 MLRDDLENVINSLSPRERDVVRMRYGLDDGRIKTLEEIGQIFSVTRERVRQIEAKAIRKL 431
Query: 549 KQCLASHGLDAYA 561
+Q S L Y
Sbjct: 432 RQPYRSSILRDYV 444
>K9P2V4_CYAGP (tr|K9P2V4) RNA polymerase sigma factor OS=Cyanobium gracile
(strain ATCC 27147 / PCC 6307) GN=Cyagr_0083 PE=3 SV=1
Length = 432
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/307 (40%), Positives = 200/307 (65%), Gaps = 3/307 (0%)
Query: 245 EGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEW 304
+G+ D +R++L +LL +EE +L +I +L LEE ++ G P EW
Sbjct: 116 KGVYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLELEEKAAEFEADKGHFPDTKEW 175
Query: 305 ADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMK 364
A + + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL++
Sbjct: 176 AAIFDMPLIKFRRRLMLGRRAKEKMVLSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIR 235
Query: 365 SVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREG 424
+ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 236 AAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKTLSQEF 295
Query: 425 NVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDV 483
PT+EE+A + +T++KL + +A++P+S++ + ++D+ + I AD IE P+
Sbjct: 296 GRKPTEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEAD--IENPEQ 353
Query: 484 YVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESR 543
VAK L+R +L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++
Sbjct: 354 DVAKNLLREDLEGVLATLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAK 413
Query: 544 ALDKLKQ 550
AL KL+
Sbjct: 414 ALRKLRH 420
>B9I6F1_POPTR (tr|B9I6F1) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_834586 PE=4 SV=1
Length = 567
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/303 (39%), Positives = 192/303 (63%)
Query: 247 LDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWAD 306
+DQ+DPLR F + +LL+ EE +L IQ+L +LE ++ L+ +FG EP+ A+WA
Sbjct: 251 VDQSDPLRFFRGASSSSRLLSATEEVELSEGIQDLLKLERIEEELKERFGGEPSFAQWAA 310
Query: 307 GVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSV 366
G+ L+ +L G K+K+I +N+R+V+ +AKNY G G++ QDL+QEG GL++
Sbjct: 311 AAGVDQLTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGTGMNLQDLVQEGCRGLVRGA 370
Query: 367 EKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNV 426
EKF G +F++YA+WWI+Q +R++L SRTIRLP ++ ++ EA+K E
Sbjct: 371 EKFDASKGFKFSTYAHWWIKQAVRKSLSDRSRTIRLPFHMVDATYRVKEARKQLYSENGR 430
Query: 427 HPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVA 486
HP +E+A G+++ +L +L + P S+ Q + + D E+TAD ET + +
Sbjct: 431 HPDDKEVAEAAGLSMKRLSAVLLTPKAPRSLDQKMGFNMDLKLSEVTADPEAETAEDLLM 490
Query: 487 KQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALD 546
K+ M++ +L +L+PRE +++R RFG+EDG K+L EIG + G+S+ERVRQ+E A
Sbjct: 491 KEFMKKDLAKVLGSLSPRENQVVRWRFGMEDGRMKTLQEIGELMGVSRERVRQIELSAFR 550
Query: 547 KLK 549
KLK
Sbjct: 551 KLK 553
>M5VUM6_PRUPE (tr|M5VUM6) Uncharacterized protein OS=Prunus persica
GN=PRUPE_ppa006657mg PE=4 SV=1
Length = 401
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/315 (38%), Positives = 196/315 (62%), Gaps = 2/315 (0%)
Query: 247 LDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWAD 306
+D +DPLR T +LLT EE +L IQ L +LE+++ L + G +PT+A+WA
Sbjct: 85 VDHSDPLRYLRATTHTSRLLTANEEIELSEGIQELLKLEKLQEELVQRCGGQPTIAQWAA 144
Query: 307 GVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSV 366
G+ L+ ++ G K+K+I +N+R+V+ +AKNY G G++ QDL+Q+G GL++
Sbjct: 145 AAGVDQKTLRKRINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQQGCRGLVRGA 204
Query: 367 EKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKK-FYNREGN 425
EKF G +F++YA+WWI+Q +R++L SRTIRLP ++ ++ EAKK Y+ G
Sbjct: 205 EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSVNGR 264
Query: 426 VHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYV 485
HP EE+A G+++ +L +L + P S++Q + +Q+ E+ AD ET + +
Sbjct: 265 -HPNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNLKPSEVIADPEAETAEDML 323
Query: 486 AKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRAL 545
K+ M++ +L +LN RE++++R RFG+EDG K+L EIG + G+S+ER+RQ+ES A
Sbjct: 324 MKKFMKQDLEKVLDSLNAREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 383
Query: 546 DKLKQCLASHGLDAY 560
KLK + L Y
Sbjct: 384 RKLKNKKRTKHLQQY 398
>A4RYI5_OSTLU (tr|A4RYI5) Predicted protein OS=Ostreococcus lucimarinus (strain
CCE9901) GN=OSTLU_41331 PE=4 SV=1
Length = 344
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/303 (39%), Positives = 196/303 (64%), Gaps = 3/303 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRL--QSQFGREPTMAEWADGV 308
D +R +L + LL +E +L +IQ+L LE ++ L ++ G E T +WA
Sbjct: 15 DSMRSYLKDIGSVTLLNAGQEVELAKRIQDLMHLESIRENLVEETGPGAEVTDYQWASAA 74
Query: 309 GLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEK 368
GL+ AL +LR G +K ++I ANLR+VV +AK Y +SFQDL+QEG +GL++ EK
Sbjct: 75 GLNVQALHQRLRDGKSAKNEMIQANLRLVVSIAKKYANSNMSFQDLIQEGCVGLIRGAEK 134
Query: 369 FKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHP 428
F Q G +F++YA+WWIRQ + R++ SRTIRLP +++ ++ ++ + ++ + +P
Sbjct: 135 FDFQRGYKFSTYAHWWIRQAVTRSISDQSRTIRLPVHLFEIISRISKMEQKFALHNGRNP 194
Query: 429 TKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTD-QDTTYQEITADTAIETPDVYVAK 487
T EE+A ++ ++ +K+ + AA+ P+S+ QT+ D + T ++ D E P+ K
Sbjct: 195 TTEEIAAEMDMSAEKITQIKKAAQAPVSLAQTMGGDNKGRTVEDTLVDVTAEGPEKVSGK 254
Query: 488 QLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDK 547
L++ N+L+TLNPRER ++RLR+G++DG K+L EIGTVF +++ER+RQ+E++AL K
Sbjct: 255 SLLKEDLENVLNTLNPRERDVLRLRYGLDDGRVKTLEEIGTVFSVTRERIRQIEAKALRK 314
Query: 548 LKQ 550
LKQ
Sbjct: 315 LKQ 317
>M0TIC0_MUSAM (tr|M0TIC0) Uncharacterized protein OS=Musa acuminata subsp.
malaccensis PE=4 SV=1
Length = 548
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 123/303 (40%), Positives = 188/303 (62%)
Query: 247 LDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWAD 306
+D +DPLR T KLL+ EE +L IQ+L +LE ++ L + G +PT A+WA
Sbjct: 232 VDYSDPLRYLRGTTSTSKLLSAVEELELSKGIQDLLKLERLREELVGRNGGQPTFAQWAT 291
Query: 307 GVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSV 366
G+ L+ +L GT K+K+I +N+R+V+ +AKNY GLS QDL+QEG GL+K
Sbjct: 292 AAGIDQKTLRKRLNDGTFCKDKMIKSNIRLVISIAKNYQNAGLSLQDLVQEGYRGLVKGA 351
Query: 367 EKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNV 426
EKF G +F++YA+WWI+Q +RR+L SRTIRLP ++ ++ EAKK E
Sbjct: 352 EKFDASKGFKFSTYAHWWIKQAVRRSLSEQSRTIRLPFHMVEATYRVREAKKQLYSENGR 411
Query: 427 HPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVA 486
HP E+A G+++ ++E +L + P S+ Q + +Q+ E+ AD ET + +
Sbjct: 412 HPDYVEVAVATGLSMKRVETVLLTPKAPRSLDQKIGINQNLKPSEVMADPEAETSEEILI 471
Query: 487 KQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALD 546
K+ M+ +L TLNPRE++++R RFG+++ K+L EIG + G+S+ER+RQ+ES A
Sbjct: 472 KKFMKADLNKVLDTLNPREKQVLRWRFGLDNERIKTLQEIGKLMGVSRERIRQIESCAFR 531
Query: 547 KLK 549
KLK
Sbjct: 532 KLK 534
>K9SYS4_9SYNE (tr|K9SYS4) RNA polymerase sigma factor OS=Synechococcus sp. PCC
7502 GN=Syn7502_03470 PE=3 SV=1
Length = 393
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 117/302 (38%), Positives = 200/302 (66%), Gaps = 4/302 (1%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFG---REPTMAEWADG 307
D +R++L +LL +EE +L +I +L +LE+ + L Q + + +WA
Sbjct: 80 DSIRLYLQEIGRIRLLRADEEIELARKIADLLQLEDKQRELAEQHDCDLEDVNLEDWAVE 139
Query: 308 VGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVE 367
+ + + +L SG R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ E
Sbjct: 140 MDMPLDKFKNRLHSGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAE 199
Query: 368 KFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVH 427
KF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 200 KFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMGRK 259
Query: 428 PTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAK 487
P++EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETPD VAK
Sbjct: 260 PSEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPDDQVAK 318
Query: 488 QLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDK 547
L+R ++L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL K
Sbjct: 319 NLLREDLESVLGTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRK 378
Query: 548 LK 549
L+
Sbjct: 379 LR 380
>Q8DL79_THEEB (tr|Q8DL79) RNA polymerase sigma factor OS=Thermosynechococcus
elongatus (strain BP-1) GN=sigA PE=3 SV=1
Length = 418
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 119/307 (38%), Positives = 201/307 (65%), Gaps = 10/307 (3%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFG-------REPTMAE 303
D +R++L +LL +EE +L +I +L +E V+ RL + G R P
Sbjct: 103 DSIRLYLQEIGRIRLLRADEEIELARKIADLLEMERVRDRLCQELGCTAEELERNP--EP 160
Query: 304 WADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLM 363
WA +G++ A + +L G ++KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+
Sbjct: 161 WAKELGMTVPAFRHRLFVGRKAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLI 220
Query: 364 KSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNRE 423
++ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 221 RAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQE 280
Query: 424 GNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDV 483
PT+EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+
Sbjct: 281 MGRKPTEEEIADRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPED 339
Query: 484 YVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESR 543
V+K L+R +L TL+PRER +++LR+G++DG K+L EIG +F +++ER+RQ+E++
Sbjct: 340 QVSKHLLREDLETVLCTLSPRERDVLKLRYGLDDGRMKTLEEIGQLFNVTRERIRQIEAK 399
Query: 544 ALDKLKQ 550
AL KL+
Sbjct: 400 ALRKLRH 406
>K9EXS2_9CYAN (tr|K9EXS2) RNA polymerase sigma factor OS=Leptolyngbya sp. PCC
7375 GN=Lepto7375DRAFT_3552 PE=3 SV=1
Length = 376
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/310 (39%), Positives = 201/310 (64%), Gaps = 1/310 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R++L +LL EEE +L +I +L LE ++ L EP A+WA V +
Sbjct: 66 DSIRLYLQEIGRIRLLRAEEEIELARKIADLLELERIRDDLSDGMDHEPDDADWAAAVDM 125
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
A + +L G R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF
Sbjct: 126 PLPAFRRRLHLGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFD 185
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
+ G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+
Sbjct: 186 HEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQELGRKPTE 245
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+ V+K L+
Sbjct: 246 EEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDEVSKSLL 304
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R +L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 305 REDLEGVLSTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 364
Query: 551 CLASHGLDAY 560
+ L Y
Sbjct: 365 PNRNSVLKEY 374
>A3YZH3_9SYNE (tr|A3YZH3) RNA polymerase sigma factor OS=Synechococcus sp. WH
5701 GN=WH5701_12059 PE=3 SV=1
Length = 469
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 124/306 (40%), Positives = 202/306 (66%), Gaps = 3/306 (0%)
Query: 245 EGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEW 304
+G+ D +R++L +LL +EE +L +I +L LEE+ + + G P EW
Sbjct: 153 KGVYTEDSIRVYLQEIGRIRLLRPDEEIELARKIADLLLLEELAGQFEQDNGHYPDNKEW 212
Query: 305 ADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMK 364
A V + + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL++
Sbjct: 213 AVLVDMPPVKFRRRLMLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIR 272
Query: 365 SVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREG 424
+ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 273 AAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEF 332
Query: 425 NVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDV 483
PT+EE+A + +T++KL + +A++P+S++ + ++D+ + I AD IE P+
Sbjct: 333 GRKPTEEEIAESMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEAD--IENPEQ 390
Query: 484 YVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESR 543
VAK L+R +L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++
Sbjct: 391 DVAKNLLREDLEGVLATLSPRERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAK 450
Query: 544 ALDKLK 549
AL KL+
Sbjct: 451 ALRKLR 456
>C1MUC7_MICPC (tr|C1MUC7) Predicted protein OS=Micromonas pusilla (strain
CCMP1545) GN=MICPUCDRAFT_47508 PE=4 SV=1
Length = 587
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 118/307 (38%), Positives = 197/307 (64%), Gaps = 5/307 (1%)
Query: 249 QNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAE----- 303
Q D ++ +L + LLT E+E +L +IQ+L LE V+ +L+ + R +E
Sbjct: 252 QTDSMKTYLKDIGSVSLLTGEQEVELAMRIQDLVYLEGVREQLEEEAKRRKQTSEVSNFD 311
Query: 304 WADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLM 363
WA ++ L+ +L +G R+K ++I ANLR+VV +AK Y + +SFQDL+QEG +GL+
Sbjct: 312 WAIAANVTERELKERLDAGKRAKNQMIQANLRLVVSIAKRYANKSMSFQDLIQEGCVGLI 371
Query: 364 KSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNRE 423
+ EKF + G +F++YA+WWIRQ + R++ SRTIRLP +++ ++ ++ + ++ +
Sbjct: 372 RGAEKFDFKRGYKFSTYAHWWIRQAVTRSISDQSRTIRLPVHLFEIISRMSKVERQLVMK 431
Query: 424 GNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDV 483
PT EE+A + +TV+K+ + A+ +P+S+ Q+V D T +E D E PD
Sbjct: 432 YGRDPTTEEIAEVMDMTVEKINQIQKASLVPISLSQSVNDDDSRTVEETLVDDHAEHPDD 491
Query: 484 YVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESR 543
K L++ N+L+TL+PRER ++RLR+G++DG K+L EIG VF +++ER+RQ+E++
Sbjct: 492 ATGKVLLKEDLENVLNTLSPRERDVLRLRYGMDDGRVKTLEEIGNVFSVTRERIRQIEAK 551
Query: 544 ALDKLKQ 550
AL KL+Q
Sbjct: 552 ALRKLRQ 558
>A3IZB7_9CHRO (tr|A3IZB7) RNA polymerase sigma factor OS=Cyanothece sp. CCY0110
GN=CY0110_28609 PE=3 SV=1
Length = 328
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 126/311 (40%), Positives = 191/311 (61%), Gaps = 1/311 (0%)
Query: 239 VEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGRE 298
V K K+ + D +R +L LLT E+E Q+Q + L E K L + G+E
Sbjct: 6 VNTKTKQPMYSADMVRTYLHEIGRVPLLTHEQEIIYGKQVQTMMNLLEKKEELAQRVGKE 65
Query: 299 PTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEG 358
P++ EWA V + ALQ L G R+K K+I ANLR+VV +AK Y R + F DL+QEG
Sbjct: 66 PSIQEWAKEVNIEEKALQKALEQGERAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEG 125
Query: 359 SMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKK 418
S+GL + VEKF P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ + ++
Sbjct: 126 SLGLERGVEKFDPTKGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKKTQR 185
Query: 419 FYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAI 478
++ T E+A+++ + ++ LS AR P+S+ V +QDT E+ D +
Sbjct: 186 ELSQSLGRSATPAEIAQELEIEPSQIREFLSIARQPISLDVRVGDNQDTELSELLEDQGV 245
Query: 479 ETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVR 538
+PD+Y+ ++L+R+ NL+ L P++R ++ LRFG+EDG E SL++IG +S+ERVR
Sbjct: 246 -SPDIYITQELLRQDLSNLMAELTPQQRTVLTLRFGLEDGKELSLAKIGKRLNISRERVR 304
Query: 539 QLESRALDKLK 549
QLE +AL +L+
Sbjct: 305 QLEHQALAQLR 315
>Q017N3_OSTTA (tr|Q017N3) SigA (ISS) OS=Ostreococcus tauri GN=Ot06g01190 PE=4
SV=1
Length = 525
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 120/313 (38%), Positives = 200/313 (63%), Gaps = 3/313 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRL--QSQFGREPTMAEWADGV 308
D +R +L + LL +E +L +IQ+L LE ++ L ++ G E + ++WA
Sbjct: 201 DSMRSYLKDIGSVTLLNAGQEVELAKRIQDLMHLESIRENLIEETGPGVELSESQWAAAA 260
Query: 309 GLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEK 368
GL+ AL+ +L G +K ++I ANLR+VV +AK Y +SFQDL+QEG +GL++ EK
Sbjct: 261 GLNVSALRQRLHDGKAAKNEMIQANLRLVVSIAKKYANTNMSFQDLIQEGCVGLIRGAEK 320
Query: 369 FKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHP 428
F Q G +F++YA+WWIRQ + R++ SRTIRLP +++ ++ ++ + ++ + P
Sbjct: 321 FDFQRGYKFSTYAHWWIRQAVTRSISDQSRTIRLPVHLFEIISRISKMEQKFALYNGRPP 380
Query: 429 TKEELARKIGVTVDKLEILLSAARIPLSMQQTV-WTDQDTTYQEITADTAIETPDVYVAK 487
T EE+A ++ ++V+K+ + AA+ P+S+ QT+ ++ T ++ D E P+ K
Sbjct: 381 TLEEIASEMEMSVEKITQIKKAAQAPVSLAQTMGGENKGRTIEDTLIDANAEGPEKVSGK 440
Query: 488 QLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDK 547
L++ N+L+TLNPRER ++RLR+G++DG K+L EIGTVF +++ER+RQ+E++AL K
Sbjct: 441 SLLKEDLENVLNTLNPRERDVLRLRYGLDDGRVKTLEEIGTVFSVTRERIRQIEAKALRK 500
Query: 548 LKQCLASHGLDAY 560
LKQ + L Y
Sbjct: 501 LKQPSRNQVLQEY 513
>M0TES6_MUSAM (tr|M0TES6) Uncharacterized protein OS=Musa acuminata subsp.
malaccensis PE=4 SV=1
Length = 548
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/323 (38%), Positives = 188/323 (58%), Gaps = 9/323 (2%)
Query: 247 LDQNDPLRMFLWGPETKKLLTFEEESQLISQIQ---------NLFRLEEVKIRLQSQFGR 297
+D +DPL T +LLT EE +L IQ +L +LE ++ L + G
Sbjct: 223 IDYSDPLHYLRGTTSTSRLLTAAEEVELSEGIQTYSKILFNGDLLKLERLQQDLTERNGC 282
Query: 298 EPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQE 357
+PT A+WA G+ L+ +L GT K+K+I +N+R+V+ +AKNY G++ QDL+QE
Sbjct: 283 QPTFAQWAAAAGIDQKVLRKRLNYGTFCKDKMITSNIRLVISIAKNYQHAGMNLQDLVQE 342
Query: 358 GSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAK 417
G GL+K EKF G +F++YA+WWI+Q +R++L SRTIRLP ++ ++ EAK
Sbjct: 343 GCRGLIKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSEQSRTIRLPFHMVEATYRVREAK 402
Query: 418 KFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTA 477
K E HP EE+A G+++ + ++ + P S+ Q + +Q E+ AD
Sbjct: 403 KQLYSENGRHPDHEEVAEASGLSMKRFAAVMLTPKAPRSLDQKIGINQTLKPSEVIADPD 462
Query: 478 IETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERV 537
ET + + KQ MR +L TLNPRE+R++R RFG+EDG K+L EIG + G+S+ER+
Sbjct: 463 AETSEDILIKQFMREDLNKVLDTLNPREKRVVRWRFGLEDGRMKTLQEIGELMGVSRERI 522
Query: 538 RQLESRALDKLKQCLASHGLDAY 560
RQ+E A KLK + L Y
Sbjct: 523 RQIEFCAFRKLKSKKRTKNLQQY 545
>G7J988_MEDTR (tr|G7J988) RNA polymerase sigma factor rpoD OS=Medicago truncatula
GN=MTR_3g118290 PE=4 SV=1
Length = 572
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/314 (39%), Positives = 193/314 (61%)
Query: 247 LDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWAD 306
+D +DPLR T +LLT EE + IQ+L +LE+++ L + G +PT A+WA
Sbjct: 256 VDYSDPLRYLRTTTRTTRLLTTSEEIKFSEGIQDLIKLEKLQEDLAEKCGGQPTFAQWAT 315
Query: 307 GVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSV 366
G+ L+ +L G KEK+I +N+R+V+ VAKNY G G+S QDL+QEG GL++
Sbjct: 316 MAGVDQKTLRKRLNYGVFCKEKMIKSNIRLVISVAKNYQGSGMSLQDLVQEGCRGLVRGA 375
Query: 367 EKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNV 426
EK+ G +F++YA+WWI+Q +R++L + SRTIRLP ++ K+ EA+K E
Sbjct: 376 EKYDASKGFKFSTYAHWWIKQAVRKSLSVQSRTIRLPFHMVGATYKVKEARKQLYSENGR 435
Query: 427 HPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVA 486
P EE+A G+++ +L +L + P S++Q V +Q E+ AD ET + +
Sbjct: 436 QPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKVGINQSLKLSEVLADPEAETAEEQLI 495
Query: 487 KQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALD 546
KQ M++ +L +LNPRE+++I+ RFG++DG K+L EIG + G+S+ER+RQ+ES A
Sbjct: 496 KQFMKKDLEKVLDSLNPREKQVIKWRFGMDDGRMKTLQEIGEMMGVSRERIRQIESCAFR 555
Query: 547 KLKQCLASHGLDAY 560
KLK + L Y
Sbjct: 556 KLKNKKRAKHLQQY 569
>Q2JT33_SYNJA (tr|Q2JT33) RNA polymerase sigma factor OS=Synechococcus sp.
(strain JA-3-3Ab) GN=CYA_2037 PE=3 SV=1
Length = 364
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 134/314 (42%), Positives = 197/314 (62%), Gaps = 20/314 (6%)
Query: 250 NDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWA---- 305
D +R++L LL +EE L ++Q+ +L +V++RLQ + GREPT+AEWA
Sbjct: 43 TDLVRLYLQEIGRVPLLGRDEEVALAQRVQDYMKLLDVRLRLQKELGREPTLAEWAARAN 102
Query: 306 ---DGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGL 362
+ L+ LQ R G R+KE +I ANLR+VV VAK Y RGL DL+QEG++GL
Sbjct: 103 QYPEWANLTPEKLQQIQRIGKRAKEHMIKANLRLVVSVAKKYQNRGLELLDLIQEGTLGL 162
Query: 363 MKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNR 422
++VEKF P+ G RF++YAYWWIRQ I RA+ SRTIRLP ++ L K+ +A++ ++
Sbjct: 163 ERAVEKFDPKKGYRFSTYAYWWIRQGITRAIATQSRTIRLPVHITEKLNKIKKAQRKLSQ 222
Query: 423 EGNVHPTKEELARKIGVTVDKLEILLSAARIP--LSMQQTVWTDQDTTYQEITADTAIET 480
E PT E++A ++ +TV ++ LL R+P +S++ V D+DT ++ +ET
Sbjct: 223 EKGRTPTIEDIASELEMTVPQVRELL--VRVPRSVSLETKVGKDKDTELGDL-----LET 275
Query: 481 PDVYVAKQLMR----RHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKER 536
D+ + +MR R + LL L RER +IR+RFG+ DG SL+EIG LS+ER
Sbjct: 276 DDISPEETMMREALHRDLQQLLADLTSRERDVIRMRFGLGDGRTYSLAEIGRALDLSRER 335
Query: 537 VRQLESRALDKLKQ 550
VRQ+E++AL KL+Q
Sbjct: 336 VRQIEAKALQKLRQ 349
>B1WQ73_CYAA5 (tr|B1WQ73) RNA polymerase sigma factor OS=Cyanothece sp. (strain
ATCC 51142) GN=sigB PE=3 SV=1
Length = 328
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 126/311 (40%), Positives = 188/311 (60%), Gaps = 1/311 (0%)
Query: 239 VEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGRE 298
V K K+ D +R +L LLT E+E Q+Q + L E K L G+E
Sbjct: 6 VNTKTKQPTYSADMVRTYLHEIGRVPLLTHEQEIIYGKQVQKMMSLLETKEELAQSLGKE 65
Query: 299 PTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEG 358
P++ EWA V L AL L G R+K K+I ANLR+VV +AK Y R + F DL+QEG
Sbjct: 66 PSLQEWAKEVNLEEKALTKALEQGERAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEG 125
Query: 359 SMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKK 418
S+GL + VEKF P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ + ++
Sbjct: 126 SLGLERGVEKFDPTKGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKKTQR 185
Query: 419 FYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAI 478
++ T E+A+++ + ++ LS AR P+S+ V +QDT E+ D +
Sbjct: 186 ELSQTLGRSATPAEIAQELEIEPSQIREFLSIARQPISLDVRVGDNQDTELSELLEDQGV 245
Query: 479 ETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVR 538
+PD+Y+ ++L+R+ NL+ L P++R ++ LRFG+EDG E SL++IG +S+ERVR
Sbjct: 246 -SPDIYITQELLRQDLSNLMAELTPQQRTVLTLRFGLEDGKELSLAKIGKRLNISRERVR 304
Query: 539 QLESRALDKLK 549
QLE +AL +L+
Sbjct: 305 QLEHQALAQLR 315
>G6GV95_9CHRO (tr|G6GV95) RNA polymerase sigma factor OS=Cyanothece sp. ATCC
51472 GN=Cy51472DRAFT_2908 PE=3 SV=1
Length = 328
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 126/311 (40%), Positives = 188/311 (60%), Gaps = 1/311 (0%)
Query: 239 VEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGRE 298
V K K+ D +R +L LLT E+E Q+Q + L E K L G+E
Sbjct: 6 VNTKTKQPTYSADMVRTYLHEIGRVPLLTHEQEIIYGKQVQKMMSLLETKEELAQSLGKE 65
Query: 299 PTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEG 358
P++ EWA V L AL L G R+K K+I ANLR+VV +AK Y R + F DL+QEG
Sbjct: 66 PSLQEWAKEVNLEEKALTKALEQGERAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEG 125
Query: 359 SMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKK 418
S+GL + VEKF P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ + ++
Sbjct: 126 SLGLERGVEKFDPTKGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKKTQR 185
Query: 419 FYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAI 478
++ T E+A+++ + ++ LS AR P+S+ V +QDT E+ D +
Sbjct: 186 ELSQTLGRSATPAEIAQELEIEPSQIREFLSIARQPISLDVRVGDNQDTELSELLEDQGV 245
Query: 479 ETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVR 538
+PD+Y+ ++L+R+ NL+ L P++R ++ LRFG+EDG E SL++IG +S+ERVR
Sbjct: 246 -SPDIYITQELLRQDLSNLMAELTPQQRTVLTLRFGLEDGKELSLAKIGKRLNISRERVR 304
Query: 539 QLESRALDKLK 549
QLE +AL +L+
Sbjct: 305 QLEHQALAQLR 315
>Q4BYC5_CROWT (tr|Q4BYC5) RNA polymerase sigma factor OS=Crocosphaera watsonii WH
8501 GN=CwatDRAFT_1739 PE=3 SV=1
Length = 328
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 126/316 (39%), Positives = 193/316 (61%), Gaps = 1/316 (0%)
Query: 239 VEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGRE 298
V K K+ + D +R +L LLT E+E Q+Q + E K L + G+E
Sbjct: 6 VNTKTKQPMYSADMVRTYLHEIGRVPLLTHEQEIIYGKQVQKMMNFLEKKEELADKLGKE 65
Query: 299 PTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEG 358
PT+ EW+ + + AL L G R+K K+I ANLR+VV +AK Y R + F DL+QEG
Sbjct: 66 PTVKEWSKELEIEQKALNQALEQGERAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEG 125
Query: 359 SMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKK 418
S+GL + VEKF P G +F++YAYWWIRQ I RA+ SRTIRLP ++ L K+ + ++
Sbjct: 126 SLGLERGVEKFDPTKGYKFSTYAYWWIRQAITRAIAQQSRTIRLPIHITEKLNKIKKTQR 185
Query: 419 FYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAI 478
++ T E+A+++ + ++ LS AR P+S+ V +QDT E+ D +
Sbjct: 186 ELSQTLGRSATPSEIAQELEIEPSQIREFLSIARQPISLDVRVGDNQDTELSELLEDQGV 245
Query: 479 ETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVR 538
+PD+Y+ ++L+R+ RNL+ L P++R ++ LRFG+EDG E SL++IG +S+ERVR
Sbjct: 246 -SPDLYITQELLRQDLRNLMAELTPQQRTVLTLRFGLEDGKELSLAKIGKRMNISRERVR 304
Query: 539 QLESRALDKLKQCLAS 554
QLE +AL +L++ A+
Sbjct: 305 QLEHQALAQLRRRRAN 320
>L8N2V5_9CYAN (tr|L8N2V5) RNA polymerase sigma factor OS=Pseudanabaena biceps PCC
7429 GN=Pse7429DRAFT_1651 PE=3 SV=1
Length = 394
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 203/306 (66%), Gaps = 10/306 (3%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFG------REPTMAEW 304
D +R++L +LL +EE +L +I +L LE + L ++ REP EW
Sbjct: 81 DSIRLYLQEIGRIRLLRADEEIELARKIADLLELELKREELATEADCHPDDVREP---EW 137
Query: 305 ADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMK 364
A +G+ + +L SG R+K+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL++
Sbjct: 138 AIKMGMPLGEFRKRLHSGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIR 197
Query: 365 SVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREG 424
+ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 198 AAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEM 257
Query: 425 NVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVY 484
PT+EE+A ++ +T++KL + +A++P+S++ + ++D+ + ++ ETPD
Sbjct: 258 GRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFI-ESEGETPDDQ 316
Query: 485 VAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRA 544
VAK L+R ++L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++A
Sbjct: 317 VAKSLLREDLESVLGTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKA 376
Query: 545 LDKLKQ 550
L KL+
Sbjct: 377 LRKLRH 382
>E0UE62_CYAP2 (tr|E0UE62) RNA polymerase sigma factor OS=Cyanothece sp. (strain
PCC 7822) GN=Cyan7822_2208 PE=3 SV=1
Length = 328
Score = 231 bits (588), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 123/299 (41%), Positives = 187/299 (62%), Gaps = 1/299 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E Q+Q + L E K L Q REP++ EWA+ V +
Sbjct: 18 DMVRTYLHEIGRVPLLTHEQEIVYGKQVQKMMTLLEKKDELAIQLEREPSLTEWANHVQM 77
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S L ++ G R+K K+I ANLR+VV +AK Y R + F DL+QEGS+GL + VEKF
Sbjct: 78 SEEELNRAIQQGKRAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLERGVEKFD 137
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ + ++ +++ T
Sbjct: 138 PTKGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKKTQRELSQQLGRSATP 197
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A+ + + D++ LS +R P+S+ V +QDT E+ D I +PD Y+ ++LM
Sbjct: 198 SEIAKALDLEPDQIREFLSMSRQPISLDVRVGDNQDTELSELLEDEGI-SPDNYITQELM 256
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
R+ ++LL L P++R ++ LRFG++DG E SL++IG +S+ERVRQLE +AL +L+
Sbjct: 257 RQDLQDLLAELTPQQREVLSLRFGLQDGKELSLAKIGQRMNISRERVRQLEHQALSQLR 315
>G5JAP6_CROWT (tr|G5JAP6) RNA polymerase sigma factor OS=Crocosphaera watsonii WH
0003 GN=CWATWH0003_4508 PE=3 SV=1
Length = 328
Score = 230 bits (587), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 125/316 (39%), Positives = 193/316 (61%), Gaps = 1/316 (0%)
Query: 239 VEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGRE 298
V K K+ + D +R +L LLT E+E Q+Q + E K L + G+E
Sbjct: 6 VNTKTKQPMYSADMVRTYLHEIGRVPLLTHEQEIIYGKQVQKMMNFLEKKEELADKLGKE 65
Query: 299 PTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEG 358
PT+ EW+ + + AL L G R+K K+I ANLR+VV +AK Y R + F DL+QEG
Sbjct: 66 PTVKEWSKELEIEQKALNQALEQGERAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEG 125
Query: 359 SMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKK 418
S+GL + VEKF P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ + ++
Sbjct: 126 SLGLERGVEKFDPTKGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKKTQR 185
Query: 419 FYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAI 478
++ T E+A+++ + ++ LS AR P+S+ V +QDT E+ D +
Sbjct: 186 ELSQTLGRSATPSEIAQELEIEPSQIREFLSIARQPISLDVRVGDNQDTELSELLEDQGV 245
Query: 479 ETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVR 538
+PD+Y+ ++L+R+ RNL+ L P++R ++ LRFG+EDG E SL++IG +S+ERVR
Sbjct: 246 -SPDLYITQELLRQDLRNLMAELTPQQRTVLTLRFGLEDGKELSLAKIGKRMNISRERVR 304
Query: 539 QLESRALDKLKQCLAS 554
QLE +AL +L++ A+
Sbjct: 305 QLEHQALAQLRRRRAN 320
>Q7NHG5_GLOVI (tr|Q7NHG5) RNA polymerase sigma factor OS=Gloeobacter violaceus
(strain PCC 7421) GN=sigA PE=3 SV=1
Length = 400
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 122/329 (37%), Positives = 206/329 (62%), Gaps = 32/329 (9%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQ---------------- 294
D +R++L +LL +EE +L QI +L LE ++ R+ +
Sbjct: 61 DSIRVYLQEIGRIRLLRADEEIELARQIADLLTLERLRARMGAAGTDMHSDVADLLGDDD 120
Query: 295 --------FGREPTMAE-----WADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVA 341
G + T +E WA+ G++ + ++ G R+K+K++ +NLR+VV +A
Sbjct: 121 LLTENLLASGDQVTESEQELRRWAEAAGIAYEQFRDRIAYGRRAKDKMVQSNLRLVVSIA 180
Query: 342 KNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIR 401
K Y+ RGLSFQDL+QEGS+GL+++ EKF + G +F++YA WWIRQ I RA+ SRTIR
Sbjct: 181 KKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIR 240
Query: 402 LPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTV 461
LP ++Y + ++ + K ++E PT+EE+A ++ +T++KL + +A++P+S++ +
Sbjct: 241 LPVHLYETISRIKKTTKLLSQELGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPI 300
Query: 462 WTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYE 520
++D+ + I AD ETP+ VAK L+R +L+TL+PRER ++RLR+G++DG
Sbjct: 301 GKEEDSRLGDFIEADG--ETPEDKVAKNLLREDLEAVLNTLSPRERDVLRLRYGLDDGRM 358
Query: 521 KSLSEIGTVFGLSKERVRQLESRALDKLK 549
K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 359 KTLEEIGQLFNVTRERIRQIEAKALRKLR 387
>K9EWZ9_9CYAN (tr|K9EWZ9) RNA polymerase sigma factor OS=Leptolyngbya sp. PCC
7375 GN=Lepto7375DRAFT_2556 PE=3 SV=1
Length = 328
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 188/305 (61%), Gaps = 1/305 (0%)
Query: 250 NDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVG 309
D +R +L LLT EEE L Q+Q L L+E K +L + G + EW+ G
Sbjct: 17 TDTVRTYLQEIGRVPLLTHEEEIVLGKQVQCLMALQETKDKLDEELGHDANRVEWSQAAG 76
Query: 310 LSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKF 369
+S L QLR G R+K K+I ANLR+VV VAK Y R L F DL+QEG++GL + VEKF
Sbjct: 77 ISETELVHQLRHGERAKRKMIEANLRLVVAVAKKYQKRNLEFLDLIQEGTLGLERGVEKF 136
Query: 370 KPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPT 429
P G +F++YAYWWIRQ I RA+ SRTIRLP ++ L K+ ++ ++ P+
Sbjct: 137 DPMKGYKFSTYAYWWIRQAITRAIAQQSRTIRLPIHITEKLNKIKREQRVLAQKLGRSPS 196
Query: 430 KEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQL 489
E+ +++ +T +++ L+ +R P+S+ + +QDT QE+ D + +P+ Y +Q
Sbjct: 197 VGEIGQELDLTPEQVREYLTMSRQPISLDVRIGDNQDTELQELLEDDTV-SPEDYTVQQS 255
Query: 490 MRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
+R+ RN+L L P+++ +I LRFG+ DG + SL+++G G+S+ERVRQLE +AL L+
Sbjct: 256 LRQDIRNMLTELTPQQKEVINLRFGLIDGTQLSLAKVGQRMGISRERVRQLEQQALKHLR 315
Query: 550 QCLAS 554
+ A+
Sbjct: 316 RRKAT 320
>L8NRV5_MICAE (tr|L8NRV5) RNA polymerase sigma factor OS=Microcystis aeruginosa
DIANCHI905 GN=rpoD2 PE=3 SV=1
Length = 328
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 185/304 (60%), Gaps = 1/304 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E Q+Q + L E K L Q GREP EWAD V L
Sbjct: 18 DMVRTYLHEIGRVPLLTHEQEIIYGKQVQRMMSLLEAKEALSKQLGREPQHLEWADSVNL 77
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S L L++G R+K K+I ANLR+VV +AK Y R + F DL+QEGS+GL + VEKF
Sbjct: 78 SENELDRALKTGDRAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLERGVEKFD 137
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ ++ ++ T
Sbjct: 138 PTKGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKRTQRELAQKLGRSATP 197
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A ++ + ++ LS AR P+S+ V +QDT E+ D+ + +PD ++ ++L+
Sbjct: 198 AEIALELDLEPAQIREYLSMARQPISLDVRVGDNQDTELSELLEDSGV-SPDTFITQELL 256
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R+ NLL L P++R +I LRFG+ DG E SL++IG +S+ERVRQLE +AL L++
Sbjct: 257 RQDLANLLAELTPQQREVITLRFGLTDGKELSLAKIGQRMNISRERVRQLEHQALAHLRR 316
Query: 551 CLAS 554
A+
Sbjct: 317 RRAN 320
>A8YCV8_MICAE (tr|A8YCV8) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 7806 GN=rpoD PE=3 SV=1
Length = 328
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 185/304 (60%), Gaps = 1/304 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E Q+Q + L E K L Q GREP EWAD V L
Sbjct: 18 DMVRTYLHEIGRVPLLTHEQEIIYGKQVQRMMSLLEAKEALSKQLGREPQHLEWADSVNL 77
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S L L++G R+K K+I ANLR+VV +AK Y R + F DL+QEGS+GL + VEKF
Sbjct: 78 SENELDRALKTGDRAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLERGVEKFD 137
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ ++ ++ T
Sbjct: 138 PTKGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKRTQRELAQKLGRSATP 197
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A ++ + ++ LS AR P+S+ V +QDT E+ D+ + +PD ++ ++L+
Sbjct: 198 AEIALELDLEPAQIREYLSMARQPISLDVRVGDNQDTELSELLEDSGV-SPDTFITQELL 256
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R+ NLL L P++R +I LRFG+ DG E SL++IG +S+ERVRQLE +AL L++
Sbjct: 257 RQDLANLLAELTPQQREVITLRFGLTDGKELSLAKIGQRMNISRERVRQLEHQALAHLRR 316
Query: 551 CLAS 554
A+
Sbjct: 317 RRAN 320
>C1E4E8_MICSR (tr|C1E4E8) Predicted protein OS=Micromonas sp. (strain RCC299 /
NOUM17) GN=MICPUN_100150 PE=4 SV=1
Length = 595
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/317 (38%), Positives = 200/317 (63%), Gaps = 4/317 (1%)
Query: 238 RVEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQ-FG 296
R+ +K + Q D ++ +L T LLT EE +L +IQ+L L V RL+ + G
Sbjct: 257 RIARKNADTKKQTDSMKTYLKDIGTVSLLTGAEEVELAKRIQDLMYLNSVCERLEEENGG 316
Query: 297 REPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQ 356
+EPT WA ++ L+ +L G R+K +I ANLR+VV +AK Y + +SFQDL+Q
Sbjct: 317 KEPTRFMWAIECNITEQELERRLEEGKRAKNAMIQANLRLVVSIAKRYANKSMSFQDLIQ 376
Query: 357 EGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEA 416
EG +GL++ EKF + G +F++YA+WWIRQ + R++ SRTIRLP +++ ++ ++ +
Sbjct: 377 EGCVGLIRGAEKFDFKRGYKFSTYAHWWIRQAVTRSISDQSRTIRLPVHLFEIISRMSKV 436
Query: 417 KKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWT---DQDTTYQEIT 473
++ + PT EELA + +TV+K++ + A+ +P+S+ QTV + T ++
Sbjct: 437 ERQMVLKLGRDPTHEELADAMEMTVEKIKQIKKASLVPISLSQTVNNSNGEDKRTVEDTL 496
Query: 474 ADTAIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLS 533
D E P+ K L++ N+L+TLNPRER ++RLR+G++DG K+L EIG VF ++
Sbjct: 497 IDDYTEHPEGETGKVLLKEDLENVLNTLNPRERDVLRLRYGLDDGRVKTLEEIGNVFSVT 556
Query: 534 KERVRQLESRALDKLKQ 550
+ER+RQ+E++AL KL+Q
Sbjct: 557 RERIRQIEAKALRKLRQ 573
>I4G7M0_MICAE (tr|I4G7M0) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 9443 GN=rpoD PE=3 SV=1
Length = 328
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 185/304 (60%), Gaps = 1/304 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E Q+Q + L E K L Q GREP EWAD V L
Sbjct: 18 DMVRTYLHEIGRVPLLTHEQEIIYGKQVQRMMSLLEAKEGLSKQLGREPQQLEWADSVNL 77
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S L L++G R+K K+I ANLR+VV +AK Y R + F DL+QEGS+GL + VEKF
Sbjct: 78 SENELDRALKTGDRAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLERGVEKFD 137
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ ++ ++ T
Sbjct: 138 PTKGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKRTQRELAQKLGRSATP 197
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A ++ + ++ LS AR P+S+ V +QDT E+ D+ + +PD ++ ++L+
Sbjct: 198 AEIALELELEPAQIREYLSMARQPISLDVRVGDNQDTELSELLEDSGV-SPDTFITQELL 256
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R+ NLL L P++R +I LRFG+ DG E SL++IG +S+ERVRQLE +AL L++
Sbjct: 257 RQDLANLLAELTPQQREVISLRFGLSDGKELSLAKIGQRMNISRERVRQLEHQALAHLRR 316
Query: 551 CLAS 554
A+
Sbjct: 317 RRAN 320
>I4H4V9_MICAE (tr|I4H4V9) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 9807 GN=rpoD PE=3 SV=1
Length = 328
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 185/304 (60%), Gaps = 1/304 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E Q+Q + L E K L Q GREP EWAD V L
Sbjct: 18 DMVRTYLHEIGRVPLLTHEQEIIYGKQVQRMMSLLEAKEGLSKQLGREPQQLEWADSVNL 77
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S L L++G R+K K+I ANLR+VV +AK Y R + F DL+QEGS+GL + VEKF
Sbjct: 78 SENELDRALKTGDRAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLERGVEKFD 137
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ ++ ++ T
Sbjct: 138 PTKGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKRTQRELAQKLGRSATP 197
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A ++ + ++ LS AR P+S+ V +QDT E+ D+ + +PD ++ ++L+
Sbjct: 198 AEIALELELEPAQIREYLSMARQPISLDVRVGDNQDTELSELLEDSGV-SPDTFITQELL 256
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R+ NLL L P++R +I LRFG+ DG E SL++IG +S+ERVRQLE +AL L++
Sbjct: 257 RQDLANLLAELTPQQREVITLRFGLTDGKELSLAKIGQRMNISRERVRQLEHQALAHLRR 316
Query: 551 CLAS 554
A+
Sbjct: 317 RRAN 320
>L7E8N7_MICAE (tr|L7E8N7) RNA polymerase sigma factor OS=Microcystis aeruginosa
TAIHU98 GN=rpoD-2 PE=3 SV=1
Length = 328
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 185/304 (60%), Gaps = 1/304 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E Q+Q + L E K L Q GREP EWAD V L
Sbjct: 18 DMVRTYLHEIGRVPLLTHEQEIIYGKQVQRMMSLLEAKEALSKQLGREPQRLEWADSVNL 77
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S L L++G R+K K+I ANLR+VV +AK Y R + F DL+QEGS+GL + VEKF
Sbjct: 78 SENELDRALKTGDRAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLERGVEKFD 137
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ ++ ++ T
Sbjct: 138 PTKGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKRTQRELAQKLGRSATP 197
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A ++ + ++ LS AR P+S+ V +QDT E+ D+ + +PD ++ ++L+
Sbjct: 198 AEIALELELEPAQIREYLSMARQPISLDVRVGDNQDTELSELLEDSGV-SPDTFITQELL 256
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R+ NLL L P++R +I LRFG+ DG E SL++IG +S+ERVRQLE +AL L++
Sbjct: 257 RQDLANLLAELTPQQREVITLRFGLTDGKELSLAKIGQRMNISRERVRQLEHQALAHLRR 316
Query: 551 CLAS 554
A+
Sbjct: 317 RRAN 320
>I4HMJ3_MICAE (tr|I4HMJ3) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 9808 GN=rpoD PE=3 SV=1
Length = 328
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 185/304 (60%), Gaps = 1/304 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E Q+Q + L E K L Q GREP EWAD V L
Sbjct: 18 DMVRTYLHEIGRVPLLTHEQEIIYGKQVQRMMSLLEAKEALSKQLGREPQRLEWADSVNL 77
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S L L++G R+K K+I ANLR+VV +AK Y R + F DL+QEGS+GL + VEKF
Sbjct: 78 SENELDRALKTGDRAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLERGVEKFD 137
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ ++ ++ T
Sbjct: 138 PTKGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKRTQRELAQKLGRSATP 197
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A ++ + ++ LS AR P+S+ V +QDT E+ D+ + +PD ++ ++L+
Sbjct: 198 AEIALELELEPAQIREYLSMARQPISLDVRVGDNQDTELSELLEDSGV-SPDTFITQELL 256
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R+ NLL L P++R +I LRFG+ DG E SL++IG +S+ERVRQLE +AL L++
Sbjct: 257 RQDLANLLAELTPQQREVITLRFGLTDGKELSLAKIGQRMNISRERVRQLEHQALAHLRR 316
Query: 551 CLAS 554
A+
Sbjct: 317 RRAN 320
>I4GJA8_MICAE (tr|I4GJA8) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 7941 GN=rpoD PE=3 SV=1
Length = 328
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 185/304 (60%), Gaps = 1/304 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E Q+Q + L E K L Q GREP EWAD V L
Sbjct: 18 DMVRTYLHEIGRVPLLTHEQEIIYGKQVQRMMSLLEAKEALSKQLGREPQRLEWADSVNL 77
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S L L++G R+K K+I ANLR+VV +AK Y R + F DL+QEGS+GL + VEKF
Sbjct: 78 SENELDRALKTGDRAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLERGVEKFD 137
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ ++ ++ T
Sbjct: 138 PTKGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKRTQRELAQKLGRSATP 197
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A ++ + ++ LS AR P+S+ V +QDT E+ D+ + +PD ++ ++L+
Sbjct: 198 AEIALELELEPAQIREYLSMARQPISLDVRVGDNQDTELSELLEDSGV-SPDTFITQELL 256
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R+ NLL L P++R +I LRFG+ DG E SL++IG +S+ERVRQLE +AL L++
Sbjct: 257 RQDLANLLAELTPQQREVITLRFGLTDGKELSLAKIGQRMNISRERVRQLEHQALAHLRR 316
Query: 551 CLAS 554
A+
Sbjct: 317 RRAN 320
>I4FIV5_MICAE (tr|I4FIV5) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 9432 GN=rpoD PE=3 SV=1
Length = 328
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 185/304 (60%), Gaps = 1/304 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E Q+Q + L E K L Q GREP EWAD V L
Sbjct: 18 DMVRTYLHEIGRVPLLTHEQEIIYGKQVQRMMSLLEAKEALSKQLGREPQRLEWADSVNL 77
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S L L++G R+K K+I ANLR+VV +AK Y R + F DL+QEGS+GL + VEKF
Sbjct: 78 SENELDRALKTGDRAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLERGVEKFD 137
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ ++ ++ T
Sbjct: 138 PTKGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKRTQRELAQKLGRSATP 197
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A ++ + ++ LS AR P+S+ V +QDT E+ D+ + +PD ++ ++L+
Sbjct: 198 AEIALELELEPAQIREYLSMARQPISLDVRVGDNQDTELSELLEDSGV-SPDTFITQELL 256
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R+ NLL L P++R +I LRFG+ DG E SL++IG +S+ERVRQLE +AL L++
Sbjct: 257 RQDLANLLAELTPQQREVITLRFGLTDGKELSLAKIGQRMNISRERVRQLEHQALAHLRR 316
Query: 551 CLAS 554
A+
Sbjct: 317 RRAN 320
>I4GV22_MICAE (tr|I4GV22) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 9806 GN=rpoD PE=3 SV=1
Length = 416
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/305 (39%), Positives = 197/305 (64%), Gaps = 7/305 (2%)
Query: 258 WGPETKKLLTFEEESQLISQ-IQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQ 316
WG K++ FE ++I++ + +L ++K L P + EW A +
Sbjct: 115 WG---KQVFLFERIEKIIAEKSEKEPKLSDIKAYLGKTELMAPMLEEWQAKSKEYLSAFK 171
Query: 317 TQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCR 376
+L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +
Sbjct: 172 RRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYK 231
Query: 377 FASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARK 436
F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+EE+A K
Sbjct: 232 FSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMRRKPTEEEIATK 291
Query: 437 IGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHAR 495
+ +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K L+R
Sbjct: 292 MEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKNLLREDLE 349
Query: 496 NLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASH 555
N+L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+ +
Sbjct: 350 NVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNS 409
Query: 556 GLDAY 560
L Y
Sbjct: 410 ILKEY 414
>I4FPN8_MICAE (tr|I4FPN8) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 9717 GN=rpoD PE=3 SV=1
Length = 328
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 185/304 (60%), Gaps = 1/304 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E Q+Q + L E K L Q GREP EWAD V L
Sbjct: 18 DMVRTYLHEIGRVPLLTHEQEIIYGKQVQRMMSLLEAKEALSKQLGREPQRLEWADSVNL 77
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S L L++G R+K K+I ANLR+VV +AK Y R + F DL+QEGS+GL + VEKF
Sbjct: 78 SENELDRALKTGDRAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLERGVEKFD 137
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ ++ ++ T
Sbjct: 138 PTKGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKRTQRELAQKLGRSATP 197
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A ++ + ++ LS AR P+S+ V +QDT E+ D+ + +PD ++ ++L+
Sbjct: 198 AEIALELELEPAQIREYLSMARQPISLDVRVGDNQDTELSELLEDSGV-SPDTFITQELL 256
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R+ NLL L P++R +I LRFG+ DG E SL++IG +S+ERVRQLE +AL L++
Sbjct: 257 RQDLANLLAELTPQQREVITLRFGLTDGKELSLAKIGQRMNISRERVRQLEHQALAHLRR 316
Query: 551 CLAS 554
A+
Sbjct: 317 RRAN 320
>I4I0R7_MICAE (tr|I4I0R7) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 9809 GN=rpoD PE=3 SV=1
Length = 328
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 185/304 (60%), Gaps = 1/304 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E Q+Q + L E K L Q GREP EWAD V L
Sbjct: 18 DMVRTYLHEIGRVPLLTHEQEIIYGKQVQRMMSLLEAKEALSKQLGREPDRLEWADSVNL 77
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S L L++G R+K K+I ANLR+VV +AK Y R + F DL+QEGS+GL + VEKF
Sbjct: 78 SENELDRALKTGDRAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLERGVEKFD 137
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ ++ ++ T
Sbjct: 138 PTKGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKRTQRELAQKLGRSATP 197
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A ++ + ++ LS AR P+S+ V +QDT E+ D+ + +PD ++ ++L+
Sbjct: 198 AEIALELELEPAQIREYLSMARQPISLDVRVGDNQDTELSELLEDSGV-SPDTFITQELL 256
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R+ NLL L P++R +I LRFG+ DG E SL++IG +S+ERVRQLE +AL L++
Sbjct: 257 RQDLANLLAELTPQQREVITLRFGLTDGKELSLAKIGQRMNISRERVRQLEHQALAHLRR 316
Query: 551 CLAS 554
A+
Sbjct: 317 RRAN 320
>I4GQP9_MICAE (tr|I4GQP9) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 9806 GN=rpoD PE=3 SV=1
Length = 328
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 185/304 (60%), Gaps = 1/304 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E Q+Q + L E K L Q GREP EWAD V L
Sbjct: 18 DMVRTYLHEIGRVPLLTHEQEIIYGKQVQRMMSLLEAKEALSKQLGREPDRLEWADSVNL 77
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S L L++G R+K K+I ANLR+VV +AK Y R + F DL+QEGS+GL + VEKF
Sbjct: 78 SENELDRALKTGDRAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLERGVEKFD 137
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ ++ ++ T
Sbjct: 138 PTKGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKRTQRELAQKLGRSATP 197
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A ++ + ++ LS AR P+S+ V +QDT E+ D+ + +PD ++ ++L+
Sbjct: 198 AEIALELELEPAQIREYLSMARQPISLDVRVGDNQDTELSELLEDSGV-SPDTFITQELL 256
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R+ NLL L P++R +I LRFG+ DG E SL++IG +S+ERVRQLE +AL L++
Sbjct: 257 RQDLANLLAELTPQQREVITLRFGLTDGKELSLAKIGQRMNISRERVRQLEHQALAHLRR 316
Query: 551 CLAS 554
A+
Sbjct: 317 RRAN 320
>B0JU57_MICAN (tr|B0JU57) RNA polymerase sigma factor OS=Microcystis aeruginosa
(strain NIES-843) GN=MAE_14230 PE=3 SV=1
Length = 328
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 185/304 (60%), Gaps = 1/304 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E Q+Q + L E K L Q GREP EWAD V L
Sbjct: 18 DMVRTYLHEIGRVPLLTHEQEIIYGKQVQRMMSLLETKEALSKQLGREPDRLEWADSVNL 77
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S L L++G R+K K+I ANLR+VV +AK Y R + F DL+QEGS+GL + VEKF
Sbjct: 78 SENELDRALKTGDRAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLERGVEKFD 137
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ ++ ++ T
Sbjct: 138 PTKGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKRTQRELAQKLGRSATP 197
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A ++ + ++ LS AR P+S+ V +QDT E+ D+ + +PD ++ ++L+
Sbjct: 198 AEIALELELEPAQIREYLSMARQPISLDVRVGDNQDTELSELLEDSGV-SPDTFITQELL 256
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R+ NLL L P++R +I LRFG+ DG E SL++IG +S+ERVRQLE +AL L++
Sbjct: 257 RQDLANLLAELTPQQREVITLRFGLTDGKELSLAKIGQRMNISRERVRQLEHQALAHLRR 316
Query: 551 CLAS 554
A+
Sbjct: 317 RRAN 320
>I4IWN2_MICAE (tr|I4IWN2) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 9701 GN=rpoD PE=3 SV=1
Length = 328
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 185/304 (60%), Gaps = 1/304 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E Q+Q + L E K L Q GREP EWAD V L
Sbjct: 18 DMVRTYLHEIGRVPLLTHEQEIIYGKQVQRMMSLLEAKEALSKQLGREPDRLEWADSVNL 77
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S L L++G R+K K+I ANLR+VV +AK Y R + F DL+QEGS+GL + VEKF
Sbjct: 78 SENELDRALKTGDRAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLERGVEKFD 137
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ ++ ++ T
Sbjct: 138 PTKGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKRTQRELAQKLGRSATP 197
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A ++ + ++ LS AR P+S+ V +QDT E+ D+ + +PD ++ ++L+
Sbjct: 198 AEIALELELEPAQIREYLSMARQPISLDVRVGDNQDTELSELLEDSGV-SPDTFITQELL 256
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R+ NLL L P++R +I LRFG+ DG E SL++IG +S+ERVRQLE +AL L++
Sbjct: 257 RQDLANLLAELTPQQREVITLRFGLTDGKELSLAKIGQRMNISRERVRQLEHQALAHLRR 316
Query: 551 CLAS 554
A+
Sbjct: 317 RRAN 320
>I4FLI6_MICAE (tr|I4FLI6) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 9717 GN=rpoD PE=3 SV=1
Length = 416
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 194/295 (65%), Gaps = 7/295 (2%)
Query: 258 WGPETKKLLTFEEESQLISQ-IQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQ 316
WG K++ FE ++I++ + +L ++K L P + EW A +
Sbjct: 115 WG---KQVFLFERIEKIIAEKSEKEPKLSDIKAYLGKTELMAPMLEEWLAKSKEYLSAFK 171
Query: 317 TQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCR 376
+L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +
Sbjct: 172 RRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYK 231
Query: 377 FASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARK 436
F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+EE+A K
Sbjct: 232 FSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMRRKPTEEEIATK 291
Query: 437 IGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHAR 495
+ +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K L+R
Sbjct: 292 MEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKNLLREDLE 349
Query: 496 NLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
N+L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 350 NVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 404
>I4H3L6_MICAE (tr|I4H3L6) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 9807 GN=rpoD PE=3 SV=1
Length = 416
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 193/295 (65%), Gaps = 7/295 (2%)
Query: 258 WGPETKKLLTFEE-ESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQ 316
WG K++ FE E ++ + + +L ++K L P + EW A +
Sbjct: 115 WG---KQVFLFERIEKIIVEKSEKEPKLSDIKAYLGKTELTAPLLEEWLAKSKEYLSAFK 171
Query: 317 TQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCR 376
+L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +
Sbjct: 172 RRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYK 231
Query: 377 FASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARK 436
F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+EE+A K
Sbjct: 232 FSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMRRKPTEEEIATK 291
Query: 437 IGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHAR 495
+ +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K L+R
Sbjct: 292 MEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKNLLREDLE 349
Query: 496 NLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
N+L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 350 NVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 404
>A8YBI5_MICAE (tr|A8YBI5) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 7806 GN=rpoD1 PE=3 SV=1
Length = 416
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 193/295 (65%), Gaps = 7/295 (2%)
Query: 258 WGPETKKLLTFEE-ESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQ 316
WG K++ FE E ++ + + +L ++K L P + EW A +
Sbjct: 115 WG---KQVFLFERIEKIIVEKSEKEPKLSDIKAYLGKTELTAPLLEEWLAKSKEYLSAFK 171
Query: 317 TQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCR 376
+L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +
Sbjct: 172 RRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYK 231
Query: 377 FASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARK 436
F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+EE+A K
Sbjct: 232 FSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMRRKPTEEEIATK 291
Query: 437 IGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHAR 495
+ +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K L+R
Sbjct: 292 MEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKNLLREDLE 349
Query: 496 NLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
N+L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 350 NVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 404
>I4IAI2_9CHRO (tr|I4IAI2) RNA polymerase sigma factor OS=Microcystis sp. T1-4
GN=rpoD PE=3 SV=1
Length = 416
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/305 (39%), Positives = 196/305 (64%), Gaps = 7/305 (2%)
Query: 258 WGPETKKLLTFEE-ESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQ 316
WG K++ FE E ++ + + +L ++K L P + EW A +
Sbjct: 115 WG---KQVFLFERIEKIIVEKSEKEPKLSDIKAYLGKTELTAPLVEEWLAKSKEYLSAFK 171
Query: 317 TQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCR 376
+L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +
Sbjct: 172 RRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYK 231
Query: 377 FASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARK 436
F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+EE+A K
Sbjct: 232 FSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMRRKPTEEEIATK 291
Query: 437 IGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHAR 495
+ +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K L+R
Sbjct: 292 MEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKNLLREDLE 349
Query: 496 NLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASH 555
N+L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+ +
Sbjct: 350 NVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNS 409
Query: 556 GLDAY 560
L Y
Sbjct: 410 ILKEY 414
>I4HZ12_MICAE (tr|I4HZ12) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 9808 GN=rpoD PE=3 SV=1
Length = 416
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 193/295 (65%), Gaps = 7/295 (2%)
Query: 258 WGPETKKLLTFEE-ESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQ 316
WG K++ FE E ++ + + +L ++K L P + EW A +
Sbjct: 115 WG---KQVFLFERIEKIIVEKSEKEPKLSDIKAYLGKTELTAPLLEEWLAKSKEYLSAFK 171
Query: 317 TQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCR 376
+L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +
Sbjct: 172 RRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYK 231
Query: 377 FASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARK 436
F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+EE+A K
Sbjct: 232 FSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMRRKPTEEEIATK 291
Query: 437 IGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHAR 495
+ +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K L+R
Sbjct: 292 MEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKNLLREDLE 349
Query: 496 NLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
N+L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 350 NVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 404
>I4GN30_MICAE (tr|I4GN30) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 7941 GN=rpoD PE=3 SV=1
Length = 416
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 193/295 (65%), Gaps = 7/295 (2%)
Query: 258 WGPETKKLLTFEE-ESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQ 316
WG K++ FE E ++ + + +L ++K L P + EW A +
Sbjct: 115 WG---KQVFLFERIEKIIVEKSEKEPKLSDIKAYLGKTELTAPLLEEWLAKSKEYLSAFK 171
Query: 317 TQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCR 376
+L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +
Sbjct: 172 RRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYK 231
Query: 377 FASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARK 436
F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+EE+A K
Sbjct: 232 FSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMRRKPTEEEIATK 291
Query: 437 IGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHAR 495
+ +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K L+R
Sbjct: 292 MEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKNLLREDLE 349
Query: 496 NLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
N+L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 350 NVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 404
>I4GB76_MICAE (tr|I4GB76) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 9443 GN=rpoD PE=3 SV=1
Length = 416
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 193/295 (65%), Gaps = 7/295 (2%)
Query: 258 WGPETKKLLTFEE-ESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQ 316
WG K++ FE E ++ + + +L ++K L P + EW A +
Sbjct: 115 WG---KQVFLFERIEKIIVEKSEKEPKLSDIKAYLGKTELTAPLLEEWLAKSKEYLSAFK 171
Query: 317 TQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCR 376
+L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +
Sbjct: 172 RRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYK 231
Query: 377 FASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARK 436
F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+EE+A K
Sbjct: 232 FSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMRRKPTEEEIATK 291
Query: 437 IGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHAR 495
+ +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K L+R
Sbjct: 292 MEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKNLLREDLE 349
Query: 496 NLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
N+L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 350 NVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 404
>I4FFA4_MICAE (tr|I4FFA4) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 9432 GN=rpoD PE=3 SV=1
Length = 416
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 193/295 (65%), Gaps = 7/295 (2%)
Query: 258 WGPETKKLLTFEE-ESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQ 316
WG K++ FE E ++ + + +L ++K L P + EW A +
Sbjct: 115 WG---KQVFLFERIEKIIVEKSEKEPKLSDIKAYLGKTELTAPLLEEWLAKSKEYLSAFK 171
Query: 317 TQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCR 376
+L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +
Sbjct: 172 RRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYK 231
Query: 377 FASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARK 436
F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+EE+A K
Sbjct: 232 FSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMRRKPTEEEIATK 291
Query: 437 IGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHAR 495
+ +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K L+R
Sbjct: 292 MEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKNLLREDLE 349
Query: 496 NLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
N+L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 350 NVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 404
>B1PVV9_MICAE (tr|B1PVV9) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 7820 GN=rpoD1 PE=3 SV=1
Length = 416
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 193/295 (65%), Gaps = 7/295 (2%)
Query: 258 WGPETKKLLTFEE-ESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQ 316
WG K++ FE E ++ + + +L ++K L P + EW A +
Sbjct: 115 WG---KQVFLFERIEKIIVEKSEKEPKLSDIKAYLGKTELTAPLLEEWLAKSKEYLSAFK 171
Query: 317 TQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCR 376
+L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +
Sbjct: 172 RRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYK 231
Query: 377 FASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARK 436
F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+EE+A K
Sbjct: 232 FSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMRRKPTEEEIATK 291
Query: 437 IGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHAR 495
+ +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K L+R
Sbjct: 292 MEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKNLLREDLE 349
Query: 496 NLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
N+L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 350 NVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 404
>I4IUY9_MICAE (tr|I4IUY9) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 9701 GN=rpoD PE=3 SV=1
Length = 416
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 194/294 (65%), Gaps = 7/294 (2%)
Query: 258 WGPETKKLLTFEEESQLISQ-IQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQ 316
WG K++ FE ++I++ + +L ++K L P + EW A +
Sbjct: 115 WG---KQVFLFERIERIIAEKSEKEPKLSDIKAYLGKTELTAPMVEEWLAKSKEYLSAFK 171
Query: 317 TQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCR 376
+L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +
Sbjct: 172 RRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYK 231
Query: 377 FASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARK 436
F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+EE+A K
Sbjct: 232 FSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMRRKPTEEEIATK 291
Query: 437 IGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHAR 495
+ +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K L+R
Sbjct: 292 MEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKNLLREDLE 349
Query: 496 NLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
N+L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 350 NVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLR 403
>L8LL46_9CHRO (tr|L8LL46) RNA polymerase sigma factor OS=Gloeocapsa sp. PCC 73106
GN=GLO73106DRAFT_00005290 PE=3 SV=1
Length = 328
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 126/307 (41%), Positives = 187/307 (60%), Gaps = 1/307 (0%)
Query: 244 KEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAE 303
K+ L D +R +L LLT E+E Q+Q + L E K +L Q GRE E
Sbjct: 11 KKTLLSADMVRTYLHEIGRVPLLTPEQEISYGKQVQKMMSLIEAKEKLNKQLGREANKQE 70
Query: 304 WADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLM 363
WA V + L+ + G R+K K+I ANLR+VV +AK Y R + F DL+QEGS+GL
Sbjct: 71 WAQYVQMDPEELEKTQQKGQRAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLE 130
Query: 364 KSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNRE 423
+ VEKF P G +F++YAYWWIRQ I RA+ RTIRLP ++ L K+ ++ ++
Sbjct: 131 RGVEKFDPTKGFKFSTYAYWWIRQAITRAIAQQGRTIRLPIHITEKLNKIKRTQRELSQR 190
Query: 424 GNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDV 483
+P+ E+AR++ + ++ LS AR P+S+ V +QDT E+ D ++ +PD
Sbjct: 191 LGRNPSPSEIARELELQPAQIREYLSVARQPISLDVRVGDNQDTELSELLEDDSV-SPDK 249
Query: 484 YVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESR 543
Y+ ++L+R+ R LL L P+++++I LRFG+EDG E SL++IG LS+ERVRQLE +
Sbjct: 250 YITQELLRQDLRMLLDELTPQQQQVISLRFGLEDGKEMSLAKIGKQLNLSRERVRQLEHQ 309
Query: 544 ALDKLKQ 550
AL L++
Sbjct: 310 ALAHLRK 316
>B0JGK3_MICAN (tr|B0JGK3) RNA polymerase sigma factor OS=Microcystis aeruginosa
(strain NIES-843) GN=sigA PE=3 SV=1
Length = 416
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 194/295 (65%), Gaps = 7/295 (2%)
Query: 258 WGPETKKLLTFEEESQLISQ-IQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQ 316
WG K++ FE ++I++ + +L ++K L P + EW A +
Sbjct: 115 WG---KQVFLFERIEKIIAEKSEKEPKLSDIKAYLGKTELMAPLVEEWLAKSKEYLSAFK 171
Query: 317 TQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCR 376
+L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +
Sbjct: 172 RRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYK 231
Query: 377 FASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARK 436
F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+EE+A K
Sbjct: 232 FSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMRRKPTEEEIATK 291
Query: 437 IGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHAR 495
+ +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K L+R
Sbjct: 292 MEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKNLLREDLE 349
Query: 496 NLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
N+L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 350 NVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 404
>I4HLE0_MICAE (tr|I4HLE0) RNA polymerase sigma factor OS=Microcystis aeruginosa
PCC 9809 GN=rpoD PE=3 SV=1
Length = 416
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 194/295 (65%), Gaps = 7/295 (2%)
Query: 258 WGPETKKLLTFEEESQLISQ-IQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQ 316
WG K++ FE ++I++ + +L ++K L P + EW A +
Sbjct: 115 WG---KQVFLFERIEKIIAEKSEKEPKLSDIKAYLGKTELMAPLVEEWLAKSKEYLSAFK 171
Query: 317 TQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCR 376
+L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +
Sbjct: 172 RRLYHGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYK 231
Query: 377 FASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARK 436
F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+EE+A K
Sbjct: 232 FSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQEMRRKPTEEEIATK 291
Query: 437 IGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHAR 495
+ +T++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K L+R
Sbjct: 292 MEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKNLLREDLE 349
Query: 496 NLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
N+L TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+
Sbjct: 350 NVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRH 404
>I4IFY1_9CHRO (tr|I4IFY1) RNA polymerase sigma factor OS=Microcystis sp. T1-4
GN=rpoD PE=3 SV=1
Length = 328
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 126/304 (41%), Positives = 185/304 (60%), Gaps = 1/304 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E Q+Q + L E K L Q GREP +WAD V L
Sbjct: 18 DMVRTYLHEIGRVPLLTHEQEIIYGKQVQRMMSLLEAKEALSKQLGREPDRLDWADSVNL 77
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S L L++G R+K K+I ANLR+VV +AK Y R + F DL+QEGS+GL + VEKF
Sbjct: 78 SENELDRALKTGDRAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLERGVEKFD 137
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ ++ ++ T
Sbjct: 138 PTKGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKRTQRELAQKLGRSATP 197
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A ++ + ++ LS AR P+S+ V +QDT E+ D+ + +PD ++ ++L+
Sbjct: 198 AEIALELELEPAQIREYLSMARQPISLDVRVGDNQDTELSELLEDSGV-SPDTFITQELL 256
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R+ NLL L P++R +I LRFG+ DG E SL++IG +S+ERVRQLE +AL L++
Sbjct: 257 RQDLANLLAELTPQQREVITLRFGLTDGKELSLAKIGQRMNISRERVRQLEHQALAHLRR 316
Query: 551 CLAS 554
A+
Sbjct: 317 RRAN 320
>B7K8N4_CYAP7 (tr|B7K8N4) RNA polymerase sigma factor OS=Cyanothece sp. (strain
PCC 7424) GN=PCC7424_2825 PE=3 SV=1
Length = 328
Score = 227 bits (579), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 121/299 (40%), Positives = 186/299 (62%), Gaps = 1/299 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E Q+Q + L E K +L + G+EP + EWA+ V +
Sbjct: 18 DMVRTYLHEIGRVPLLTHEQEIVYGKQVQKMMTLLEKKDQLAIELGKEPNLTEWANQVQM 77
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S L ++ G R+K K+I ANLR+VV +AK Y R + F DL+QEGS+GL + VEKF
Sbjct: 78 SEEELNRAIQQGKRAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLERGVEKFD 137
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ + ++ +++ T
Sbjct: 138 PTKGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKKTQRELSQQLGRSATP 197
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A+ + + ++ LS +R P+S+ V +QDT E+ D I +PD Y+ ++LM
Sbjct: 198 AEIAKALDLEPAQIREFLSMSRQPISLDVRVGDNQDTELSELLEDEGI-SPDNYITQELM 256
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
R+ +LL L P++R ++ LRFG++DG E SL++IG +S+ERVRQLE +AL +L+
Sbjct: 257 RQDLHDLLAELTPQQREVLSLRFGLQDGKELSLAKIGQRMNISRERVRQLEHQALSQLR 315
>B8C130_THAPS (tr|B8C130) RNA polymerase (Fragment) OS=Thalassiosira pseudonana
GN=THAPSDRAFT_33682 PE=4 SV=1
Length = 318
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/319 (39%), Positives = 195/319 (61%), Gaps = 6/319 (1%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGV-- 308
D ++ ++ LL EE L +IQ L + EEV+ L+ Q R PT EWA+ +
Sbjct: 1 DSMKYYMKTMGNHDLLQKNEEIILAREIQILIKWEEVREELEGQLLRPPTYQEWANAIEP 60
Query: 309 GLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEK 368
G++ ++ Q+R R+K L +NLR+V+ +AK Y GRGL+ QDL QEG++GL ++ EK
Sbjct: 61 GMTVTQIKKQIRRSLRAKAALTESNLRLVISIAKRYQGRGLNMQDLCQEGTLGLTRACEK 120
Query: 369 FKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHP 428
F P+ G RF++YA WWI+Q I RA+ +RTIRLP +++ L + +A++ E
Sbjct: 121 FDPERGFRFSTYATWWIKQGIMRAIADQARTIRLPVHIHDQLSIVRKAERDLQNELGRDA 180
Query: 429 TKEELARKIGVTVDKLEILLSAARIPLSMQQTVWT---DQDTTYQEITADTAIETPDVYV 485
TKEE+A K+G+ DK+E L A+ +SM+Q + T ++ T Q+ D + D+
Sbjct: 181 TKEEVAAKVGMKPDKIEFLKRASVGSISMEQELGTSGSERSFTIQDTLGDPDQKPVDMAQ 240
Query: 486 AKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRAL 545
+ L R L+ TLN RE+ +IR+RFG++DG K+L EIG F +++ER+RQ+E+RAL
Sbjct: 241 YRMLQDDVGR-LICTLNAREQAVIRMRFGLDDGKAKTLEEIGKKFSVTRERIRQIEARAL 299
Query: 546 DKLKQCLASHGLDAYANLL 564
KL+Q +H + YAN L
Sbjct: 300 HKLRQPYRNHTVKCYANEL 318
>Q2JS52_SYNJA (tr|Q2JS52) RNA polymerase sigma factor OS=Synechococcus sp.
(strain JA-3-3Ab) GN=rpoD PE=3 SV=1
Length = 404
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/316 (37%), Positives = 203/316 (64%), Gaps = 6/316 (1%)
Query: 250 NDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFG-----REPTMAEW 304
+D +R++L +LL +EE +L +I +L LE + + + G E W
Sbjct: 88 DDSIRVYLQEIGRIRLLRADEEIELARKIADLLELERAREAVFQRMGLWSDPEEVPETLW 147
Query: 305 ADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMK 364
A+ V +S + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL++
Sbjct: 148 AEEVKMSLPEFRRRLHRGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIR 207
Query: 365 SVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREG 424
+ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 208 AAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKVTKQLSQEL 267
Query: 425 NVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVY 484
PT+EE+A ++ +T++KL + +A++P+S++ + ++D+ + ++ ETP+
Sbjct: 268 GRRPTEEEIATRMEITIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFI-ESEGETPEER 326
Query: 485 VAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRA 544
VAK L+R ++L TL PRER +++LR+G++DG K+L EIG +F +++ER+RQ+E++A
Sbjct: 327 VAKVLLREDLESVLETLTPRERDVLKLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKA 386
Query: 545 LDKLKQCLASHGLDAY 560
L KL+ + L Y
Sbjct: 387 LRKLRHPNRNSVLKEY 402
>B2IZR4_NOSP7 (tr|B2IZR4) RNA polymerase sigma factor OS=Nostoc punctiforme
(strain ATCC 29133 / PCC 73102) GN=Npun_F1499 PE=3 SV=1
Length = 339
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 182/300 (60%), Gaps = 1/300 (0%)
Query: 250 NDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVG 309
+D +R +L LLT E+E Q+Q + L K L + EPT+ EWAD V
Sbjct: 29 DDIVRSYLQEIGRVDLLTREQEVIFAQQVQLMMNLLAAKEELAVKLDHEPTLQEWADRVE 88
Query: 310 LSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKF 369
L L+ QL G ++K+K+I ANLR+VV VAK Y R L F DL+QEG++GL + V+KF
Sbjct: 89 LGAEVLELQLSQGHQAKQKMIQANLRLVVAVAKKYQHRNLEFMDLIQEGTLGLERGVDKF 148
Query: 370 KPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPT 429
P G +F++YAYWWIRQ I RA+ RTIRLP +V+ L K+ ++ +++ PT
Sbjct: 149 DPALGYKFSTYAYWWIRQGITRAIAQQGRTIRLPIHVFEKLNKIKRVQRELSQQLGRVPT 208
Query: 430 KEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQL 489
E+A + +T ++ L AR P S++ V QDT Q+I D +P+ Y ++
Sbjct: 209 TAEIANALSLTPSQVRECLYLARQPFSLEARVGEQQDTELQDILEDDG-PSPEDYAVEES 267
Query: 490 MRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
+ + ++LL L+P++R I+ LRFG+ DGYE SL++IG G+S+ERVRQ+E +AL L+
Sbjct: 268 LHQDLQDLLAKLSPQQREILTLRFGLTDGYELSLAQIGDRMGISRERVRQIEQKALSLLR 327
>Q4C7J7_CROWT (tr|Q4C7J7) RNA polymerase sigma factor OS=Crocosphaera watsonii WH
8501 GN=CwatDRAFT_5683 PE=3 SV=1
Length = 414
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/301 (39%), Positives = 193/301 (64%), Gaps = 26/301 (8%)
Query: 281 LFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYA--------------------LQTQLR 320
+F+ E ++ RL SQ +EP +W+D V A + +L
Sbjct: 117 IFQWENIEQRLCSQKNKEP---KWSDIVAELNKAEIISDLEKTWKQQSKAYLPKFKRRLY 173
Query: 321 SGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASY 380
G R+K+K++H+NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +F++Y
Sbjct: 174 LGRRAKDKMVHSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTY 233
Query: 381 AYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVT 440
A WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+EE+A ++ +T
Sbjct: 234 ATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMRRKPTEEEIATRMEMT 293
Query: 441 VDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHARNLLH 499
++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K L+R N+L
Sbjct: 294 IEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKNLLREDLENVLD 351
Query: 500 TLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGLDA 559
TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+ + L
Sbjct: 352 TLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSILKE 411
Query: 560 Y 560
Y
Sbjct: 412 Y 412
>G5JAB0_CROWT (tr|G5JAB0) RNA polymerase sigma factor OS=Crocosphaera watsonii WH
0003 GN=CWATWH0003_4374 PE=3 SV=1
Length = 414
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/301 (39%), Positives = 193/301 (64%), Gaps = 26/301 (8%)
Query: 281 LFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYA--------------------LQTQLR 320
+F+ E ++ RL SQ +EP +W+D V A + +L
Sbjct: 117 IFQWENIEQRLCSQKNKEP---KWSDIVAELNKAEIISDLEKTWKQQSKAYLPKFKRRLY 173
Query: 321 SGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASY 380
G R+K+K++H+NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +F++Y
Sbjct: 174 LGRRAKDKMVHSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTY 233
Query: 381 AYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVT 440
A WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+EE+A ++ +T
Sbjct: 234 ATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMRRKPTEEEIATRMEMT 293
Query: 441 VDKLEILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHARNLLH 499
++KL + +A++P+S++ + ++D+ + I AD ETP+ V+K L+R N+L
Sbjct: 294 IEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKNLLREDLENVLD 351
Query: 500 TLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGLDA 559
TL+PRER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+ + L
Sbjct: 352 TLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSILKE 411
Query: 560 Y 560
Y
Sbjct: 412 Y 412
>B1WS32_CYAA5 (tr|B1WS32) RNA polymerase sigma factor OS=Cyanothece sp. (strain
ATCC 51142) GN=sigA PE=3 SV=1
Length = 416
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 127/357 (35%), Positives = 210/357 (58%), Gaps = 49/357 (13%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEW------ 304
D +R++L +LL EEE +L +I +L +LE ++ L + +EPT +W
Sbjct: 60 DSIRVYLQEIGRIRLLRAEEEIELARKIADLLQLERIREALWEELDQEPTDEQWGKRIFQ 119
Query: 305 -----------------------------ADGVG-------LSCYA----LQTQLRSGTR 324
AD + L A + +L G +
Sbjct: 120 WENIEQMLRAQSAKDKDPKWSEVTTMLQQADIISDLEKTWKLESKAYLPKFKRRLYLGRK 179
Query: 325 SKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWW 384
+K+K++H+NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +F++YA WW
Sbjct: 180 AKDKMVHSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWW 239
Query: 385 IRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKL 444
IRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+EE+A ++ +T++KL
Sbjct: 240 IRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMRRKPTEEEIATRMEMTIEKL 299
Query: 445 EILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHARNLLHTLNP 503
+ +A++P+S++ + ++D+ + I AD ETP+ V+K L+R N+L TL+P
Sbjct: 300 RFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKNLLREDLENVLDTLSP 357
Query: 504 RERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGLDAY 560
RER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+ + L Y
Sbjct: 358 RERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSILKEY 414
>G6GVW3_9CHRO (tr|G6GVW3) RNA polymerase sigma factor OS=Cyanothece sp. ATCC
51472 GN=Cy51472DRAFT_3126 PE=3 SV=1
Length = 416
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 127/357 (35%), Positives = 210/357 (58%), Gaps = 49/357 (13%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEW------ 304
D +R++L +LL EEE +L +I +L +LE ++ L + +EPT +W
Sbjct: 60 DSIRVYLQEIGRIRLLRAEEEIELARKIADLLQLERIREALWEELDQEPTDEQWGKRIFQ 119
Query: 305 -----------------------------ADGVG-------LSCYA----LQTQLRSGTR 324
AD + L A + +L G +
Sbjct: 120 WENIEQMLRAQSAKDKDPKWSEVTTMLQQADIISDLEKTWKLESKAYLPKFKRRLYLGRK 179
Query: 325 SKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWW 384
+K+K++H+NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +F++YA WW
Sbjct: 180 AKDKMVHSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWW 239
Query: 385 IRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKL 444
IRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+EE+A ++ +T++KL
Sbjct: 240 IRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMRRKPTEEEIATRMEMTIEKL 299
Query: 445 EILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHARNLLHTLNP 503
+ +A++P+S++ + ++D+ + I AD ETP+ V+K L+R N+L TL+P
Sbjct: 300 RFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKNLLREDLENVLDTLSP 357
Query: 504 RERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGLDAY 560
RER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+ + L Y
Sbjct: 358 RERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSILKEY 414
>L8AT57_9SYNC (tr|L8AT57) RNA polymerase sigma factor OS=Synechocystis sp. PCC
6803 GN=rpoD PE=3 SV=1
Length = 328
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 184/300 (61%), Gaps = 1/300 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E L Q+Q + L E K L + GREP+ EWA+ L
Sbjct: 18 DMVRSYLHEIGRVPLLTHEQEIILGKQVQQMMALLEHKKALADRLGREPSDPEWAEAADL 77
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S L L G R+K K+I ANLR+VV +AK Y R + F DL+QEGS+GL + VEKF
Sbjct: 78 SVTKLHRYLGQGERAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLERGVEKFD 137
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ RTIRLP ++ L K+ + ++ +++ T
Sbjct: 138 PTKGYKFSTYAYWWIRQAITRAIAQQGRTIRLPIHITEKLNKIKKTQRELSQQLGRSATP 197
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A+ + + ++ LS +R P+S+ V +QDT E+ D + +PD Y+ ++ M
Sbjct: 198 AEVAKALEIDPSQIREYLSLSRQPISLDVRVGDNQDTELSELLEDEGV-SPDAYITQESM 256
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R+ +NLL L P+++ ++ +RFG+ DG E SL++IG +S+ERVRQLE++AL +LK+
Sbjct: 257 RQDLQNLLAELTPQQQAVLTMRFGLNDGQELSLAKIGQHLNISRERVRQLENQALAQLKR 316
>F7ULM9_SYNYG (tr|F7ULM9) RNA polymerase sigma factor OS=Synechocystis sp.
(strain PCC 6803 / GT-S) GN=rpoDI PE=3 SV=1
Length = 425
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/355 (36%), Positives = 206/355 (58%), Gaps = 47/355 (13%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGV-- 308
D +R++L +LL EEE +L QI +L LE ++ L Q R+P+ EW V
Sbjct: 71 DSIRIYLQEIGRIRLLRAEEEIELARQIADLLELELIRDNLTLQLERQPSELEWGKQVWK 130
Query: 309 -------------------GLSCY-----------------------ALQTQLRSGTRSK 326
+ Y A + +L R+K
Sbjct: 131 LETAKQRLVGDKKKEPKKKDIDSYLANPDNELSLENEWSQQPNKNFAAFRRRLFLDRRAK 190
Query: 327 EKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIR 386
+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +F++YA WWIR
Sbjct: 191 DKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIR 250
Query: 387 QTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKLEI 446
Q I RA+ SRTIRLP ++Y + ++ + K ++E PT+EE+A K+ +T++KL
Sbjct: 251 QAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMRRKPTEEEIAEKMEMTIEKLRF 310
Query: 447 LLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHARNLLHTLNPRE 505
+ +A++P+S++ + ++D+ + I AD ETP+ V+K L+R N+L TL+PRE
Sbjct: 311 IAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKNLLREDLENVLDTLSPRE 368
Query: 506 RRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGLDAY 560
R ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+ + L Y
Sbjct: 369 RDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSILKEY 423
>M1MNH4_9SYNC (tr|M1MNH4) RNA polymerase sigma factor OS=Synechocystis sp. PCC
6803 GN=rpoDI PE=3 SV=1
Length = 425
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/355 (36%), Positives = 206/355 (58%), Gaps = 47/355 (13%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGV-- 308
D +R++L +LL EEE +L QI +L LE ++ L Q R+P+ EW V
Sbjct: 71 DSIRIYLQEIGRIRLLRAEEEIELARQIADLLELELIRDNLTLQLERQPSELEWGKQVWK 130
Query: 309 -------------------GLSCY-----------------------ALQTQLRSGTRSK 326
+ Y A + +L R+K
Sbjct: 131 LETAKQRLVGDKKKEPKKKDIDSYLANPDNELSLENEWSQQPNKNFAAFRRRLFLDRRAK 190
Query: 327 EKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIR 386
+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +F++YA WWIR
Sbjct: 191 DKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIR 250
Query: 387 QTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKLEI 446
Q I RA+ SRTIRLP ++Y + ++ + K ++E PT+EE+A K+ +T++KL
Sbjct: 251 QAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMRRKPTEEEIAEKMEMTIEKLRF 310
Query: 447 LLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHARNLLHTLNPRE 505
+ +A++P+S++ + ++D+ + I AD ETP+ V+K L+R N+L TL+PRE
Sbjct: 311 IAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKNLLREDLENVLDTLSPRE 368
Query: 506 RRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGLDAY 560
R ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+ + L Y
Sbjct: 369 RDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSILKEY 423
>H0PJ89_9SYNC (tr|H0PJ89) RNA polymerase sigma factor OS=Synechocystis sp. PCC
6803 substr. PCC-P GN=rpoDI PE=3 SV=1
Length = 425
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/355 (36%), Positives = 206/355 (58%), Gaps = 47/355 (13%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGV-- 308
D +R++L +LL EEE +L QI +L LE ++ L Q R+P+ EW V
Sbjct: 71 DSIRIYLQEIGRIRLLRAEEEIELARQIADLLELELIRDNLTLQLERQPSELEWGKQVWK 130
Query: 309 -------------------GLSCY-----------------------ALQTQLRSGTRSK 326
+ Y A + +L R+K
Sbjct: 131 LETAKQRLVGDKKKEPKKKDIDSYLANPDNELSLENEWSQQPNKNFAAFRRRLFLDRRAK 190
Query: 327 EKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIR 386
+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +F++YA WWIR
Sbjct: 191 DKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIR 250
Query: 387 QTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKLEI 446
Q I RA+ SRTIRLP ++Y + ++ + K ++E PT+EE+A K+ +T++KL
Sbjct: 251 QAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMRRKPTEEEIAEKMEMTIEKLRF 310
Query: 447 LLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHARNLLHTLNPRE 505
+ +A++P+S++ + ++D+ + I AD ETP+ V+K L+R N+L TL+PRE
Sbjct: 311 IAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKNLLREDLENVLDTLSPRE 368
Query: 506 RRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGLDAY 560
R ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+ + L Y
Sbjct: 369 RDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSILKEY 423
>H0PED4_9SYNC (tr|H0PED4) RNA polymerase sigma factor OS=Synechocystis sp. PCC
6803 substr. PCC-N GN=rpoDI PE=3 SV=1
Length = 425
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/355 (36%), Positives = 206/355 (58%), Gaps = 47/355 (13%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGV-- 308
D +R++L +LL EEE +L QI +L LE ++ L Q R+P+ EW V
Sbjct: 71 DSIRIYLQEIGRIRLLRAEEEIELARQIADLLELELIRDNLTLQLERQPSELEWGKQVWK 130
Query: 309 -------------------GLSCY-----------------------ALQTQLRSGTRSK 326
+ Y A + +L R+K
Sbjct: 131 LETAKQRLVGDKKKEPKKKDIDSYLANPDNELSLENEWSQQPNKNFAAFRRRLFLDRRAK 190
Query: 327 EKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIR 386
+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +F++YA WWIR
Sbjct: 191 DKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIR 250
Query: 387 QTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKLEI 446
Q I RA+ SRTIRLP ++Y + ++ + K ++E PT+EE+A K+ +T++KL
Sbjct: 251 QAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMRRKPTEEEIAEKMEMTIEKLRF 310
Query: 447 LLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHARNLLHTLNPRE 505
+ +A++P+S++ + ++D+ + I AD ETP+ V+K L+R N+L TL+PRE
Sbjct: 311 IAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKNLLREDLENVLDTLSPRE 368
Query: 506 RRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGLDAY 560
R ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+ + L Y
Sbjct: 369 RDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSILKEY 423
>H0P220_9SYNC (tr|H0P220) RNA polymerase sigma factor OS=Synechocystis sp. PCC
6803 substr. GT-I GN=rpoDI PE=3 SV=1
Length = 425
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/355 (36%), Positives = 206/355 (58%), Gaps = 47/355 (13%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGV-- 308
D +R++L +LL EEE +L QI +L LE ++ L Q R+P+ EW V
Sbjct: 71 DSIRIYLQEIGRIRLLRAEEEIELARQIADLLELELIRDNLTLQLERQPSELEWGKQVWK 130
Query: 309 -------------------GLSCY-----------------------ALQTQLRSGTRSK 326
+ Y A + +L R+K
Sbjct: 131 LETAKQRLVGDKKKEPKKKDIDSYLANPDNELSLENEWSQQPNKNFAAFRRRLFLDRRAK 190
Query: 327 EKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWIR 386
+K++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +F++YA WWIR
Sbjct: 191 DKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIR 250
Query: 387 QTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKLEI 446
Q I RA+ SRTIRLP ++Y + ++ + K ++E PT+EE+A K+ +T++KL
Sbjct: 251 QAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMRRKPTEEEIAEKMEMTIEKLRF 310
Query: 447 LLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHARNLLHTLNPRE 505
+ +A++P+S++ + ++D+ + I AD ETP+ V+K L+R N+L TL+PRE
Sbjct: 311 IAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKNLLREDLENVLDTLSPRE 368
Query: 506 RRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGLDAY 560
R ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+ + L Y
Sbjct: 369 RDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSILKEY 423
>A3ISY9_9CHRO (tr|A3ISY9) RNA polymerase sigma factor OS=Cyanothece sp. CCY0110
GN=CY0110_28844 PE=3 SV=1
Length = 416
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/357 (35%), Positives = 208/357 (58%), Gaps = 49/357 (13%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGV-- 308
D +R++L +LL EEE +L +I +L +LE ++ L + +EPT +W +
Sbjct: 60 DSIRVYLQEIGRIRLLRAEEEIELARKIADLLQLERIREALWEELDQEPTDEQWGKRIFQ 119
Query: 309 ----------------------------------------GLSCYA----LQTQLRSGTR 324
L A + +L G +
Sbjct: 120 WENIEQMLRAQSSKEKEPKWSEVTDMLQKAEIISDLEKTWKLESKAYLPKFKRRLYLGRK 179
Query: 325 SKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWW 384
+K+K++H+NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +F++YA WW
Sbjct: 180 AKDKMVHSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWW 239
Query: 385 IRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKL 444
IRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+EE+A ++ +T++KL
Sbjct: 240 IRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMRRKPTEEEIATRMEMTIEKL 299
Query: 445 EILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHARNLLHTLNP 503
+ +A++P+S++ + ++D+ + I AD ETP+ V+K L+R N+L TL+P
Sbjct: 300 RFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVSKNLLREDLENVLDTLSP 357
Query: 504 RERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGLDAY 560
RER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+ + L Y
Sbjct: 358 RERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSILKEY 414
>B8HQG4_CYAP4 (tr|B8HQG4) RNA polymerase sigma factor OS=Cyanothece sp. (strain
PCC 7425 / ATCC 29141) GN=Cyan7425_1584 PE=3 SV=1
Length = 327
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 122/314 (38%), Positives = 191/314 (60%), Gaps = 1/314 (0%)
Query: 237 LRVEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFG 296
L+ + + ++ + D +R +L LLT E+E L Q+Q L L E + +L +
Sbjct: 4 LKTKTQTRDSMVSTDMVRTYLHEIGRVPLLTHEQEIVLGKQVQQLMELLEAREKLTTSLD 63
Query: 297 REPTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQ 356
R PT EWA+ LS L T +R G R+K+K+I ANLR+VV VAK Y R L DL+Q
Sbjct: 64 RSPTAEEWAEQANLSVADLNTAVRRGQRAKQKMIEANLRLVVSVAKKYQKRNLELLDLIQ 123
Query: 357 EGSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEA 416
EG++GL + VEKF P G +F++YAYWWIRQ I RA+ +RT+RLP ++ L K+ +A
Sbjct: 124 EGTLGLERGVEKFDPTRGYKFSTYAYWWIRQAITRAIAQQARTVRLPIHITEKLNKIKKA 183
Query: 417 KKFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADT 476
++ ++ T E+A+++ + ++ L+ AR P+S+ V +QDT +++ D
Sbjct: 184 QRVLSQRLGRSATPAEIAQELELEPSQIREYLTLARQPVSLDLRVGDNQDTELRDLLEDD 243
Query: 477 AIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKER 536
+ +P+ Y + +R +LL L P++R ++ LRFG+EDG E SL+++G LS+ER
Sbjct: 244 S-PSPEQYTTGEALRDDVNHLLAELTPQQREVLTLRFGLEDGKELSLAKVGEQLSLSRER 302
Query: 537 VRQLESRALDKLKQ 550
VRQLE +ALD L++
Sbjct: 303 VRQLERQALDHLRR 316
>D3EMZ4_UCYNA (tr|D3EMZ4) RNA polymerase sigma factor OS=cyanobacterium UCYN-A
GN=UCYN_00890 PE=3 SV=1
Length = 420
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 127/357 (35%), Positives = 207/357 (57%), Gaps = 49/357 (13%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVK---------------------- 288
D +R++L +LL EEE +L +I +L +LE ++
Sbjct: 64 DSIRVYLQEIGRIRLLRAEEEIELARKIADLLQLERIREALWEELDQVPNDEQWAKRIFQ 123
Query: 289 -------IRLQSQFGREPTMAE-----------------WADGVGLSCYALQTQLRSGTR 324
IR QS +EP +E W + +L G +
Sbjct: 124 WENIEQIIRTQSSKEKEPKWSEVTSLLQEKKTISNLEKIWELEQKSYLPKFKRRLYLGRK 183
Query: 325 SKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWW 384
+K+K++H+NLR+VV +AK Y+ RGLSFQDL+QEGS+GL+++ EKF + G +F++YA WW
Sbjct: 184 AKDKMVHSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWW 243
Query: 385 IRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKL 444
IRQ I RA+ SRTIRLP ++Y + ++ + K ++E PT+EE+A ++ +T++KL
Sbjct: 244 IRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMRRKPTEEEIATRMEMTIEKL 303
Query: 445 EILLSAARIPLSMQQTVWTDQDTTYQE-ITADTAIETPDVYVAKQLMRRHARNLLHTLNP 503
+ +A++P+S++ + ++D+ + I AD ETP+ VAK L+R N+L TL+P
Sbjct: 304 RFIAKSAQLPISLETPIGKEEDSRLGDFIEADG--ETPEDEVAKNLLREDLENVLDTLSP 361
Query: 504 RERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGLDAY 560
RER ++RLR+G++DG K+L EIG +F +++ER+RQ+E++AL KL+ + L Y
Sbjct: 362 RERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSVLKEY 418
>C7QM79_CYAP0 (tr|C7QM79) RNA polymerase sigma factor OS=Cyanothece sp. (strain
PCC 8802) GN=Cyan8802_3567 PE=3 SV=1
Length = 328
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 125/311 (40%), Positives = 187/311 (60%), Gaps = 1/311 (0%)
Query: 239 VEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGRE 298
V K K+ + D +R +L LLT E+E Q+Q + L E+K +L G E
Sbjct: 6 VNSKTKQPMYSADMVRTYLHEIGRVPLLTHEQEIVYGKQVQRMMSLFEMKDQLTQAQGTE 65
Query: 299 PTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEG 358
P+ EWA V L LQ + G R+K K+I ANLR+VV +AK Y R + F DL+QEG
Sbjct: 66 PSDKEWAKAVNLKEPELQKTIEQGNRAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEG 125
Query: 359 SMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKK 418
S+GL + VEKF P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ + ++
Sbjct: 126 SLGLERGVEKFDPTKGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKKTQR 185
Query: 419 FYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAI 478
+++ T E+A + + ++ LS AR P+S+ V +QDT E+ D
Sbjct: 186 ELSQKLGRSATPAEIAAVLEIEPSQIRECLSMARQPISLDVRVGDNQDTELSELLEDHEA 245
Query: 479 ETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVR 538
+PD Y+ ++L+R+ +NL+ L P++R ++ LRFG+EDG E SL++IG +S+ERVR
Sbjct: 246 -SPDQYITQELLRQDLKNLMEELTPQQRSVLILRFGLEDGKELSLAKIGKKLNISRERVR 304
Query: 539 QLESRALDKLK 549
QLE +AL +L+
Sbjct: 305 QLEHQALAQLR 315
>Q55525_SYNY3 (tr|Q55525) RNA polymerase sigma factor OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=rpoD PE=3 SV=1
Length = 345
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 184/300 (61%), Gaps = 1/300 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E L Q+Q + L E K L + GREP+ EWA+ L
Sbjct: 35 DMVRSYLHEIGRVPLLTHEQEIILGKQVQQMMALLEHKKALADRLGREPSDPEWAEAADL 94
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S L L G R+K K+I ANLR+VV +AK Y R + F DL+QEGS+GL + VEKF
Sbjct: 95 SVTKLHRYLGQGERAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLERGVEKFD 154
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ RTIRLP ++ L K+ + ++ +++ T
Sbjct: 155 PTKGYKFSTYAYWWIRQAITRAIAQQGRTIRLPIHITEKLNKIKKTQRELSQQLGRSATP 214
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A+ + + ++ LS +R P+S+ V +QDT E+ D + +PD Y+ ++ M
Sbjct: 215 AEVAKALEIDPSQIREYLSLSRQPISLDVRVGDNQDTELSELLEDEGV-SPDAYITQESM 273
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R+ +NLL L P+++ ++ +RFG+ DG E SL++IG +S+ERVRQLE++AL +LK+
Sbjct: 274 RQDLQNLLAELTPQQQAVLTMRFGLNDGQELSLAKIGQHLNISRERVRQLENQALAQLKR 333
>F7URP3_SYNYG (tr|F7URP3) RNA polymerase sigma factor OS=Synechocystis sp.
(strain PCC 6803 / GT-S) GN=rpoD PE=3 SV=1
Length = 345
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 184/300 (61%), Gaps = 1/300 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E L Q+Q + L E K L + GREP+ EWA+ L
Sbjct: 35 DMVRSYLHEIGRVPLLTHEQEIILGKQVQQMMALLEHKKALADRLGREPSDPEWAEAADL 94
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S L L G R+K K+I ANLR+VV +AK Y R + F DL+QEGS+GL + VEKF
Sbjct: 95 SVTKLHRYLGQGERAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLERGVEKFD 154
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ RTIRLP ++ L K+ + ++ +++ T
Sbjct: 155 PTKGYKFSTYAYWWIRQAITRAIAQQGRTIRLPIHITEKLNKIKKTQRELSQQLGRSATP 214
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A+ + + ++ LS +R P+S+ V +QDT E+ D + +PD Y+ ++ M
Sbjct: 215 AEVAKALEIDPSQIREYLSLSRQPISLDVRVGDNQDTELSELLEDEGV-SPDAYITQESM 273
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R+ +NLL L P+++ ++ +RFG+ DG E SL++IG +S+ERVRQLE++AL +LK+
Sbjct: 274 RQDLQNLLAELTPQQQAVLTMRFGLNDGQELSLAKIGQHLNISRERVRQLENQALAQLKR 333
>M1MBB9_9SYNC (tr|M1MBB9) RNA polymerase sigma factor OS=Synechocystis sp. PCC
6803 GN=rpoD PE=3 SV=1
Length = 345
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 184/300 (61%), Gaps = 1/300 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E L Q+Q + L E K L + GREP+ EWA+ L
Sbjct: 35 DMVRSYLHEIGRVPLLTHEQEIILGKQVQQMMALLEHKKALADRLGREPSDPEWAEAADL 94
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S L L G R+K K+I ANLR+VV +AK Y R + F DL+QEGS+GL + VEKF
Sbjct: 95 SVTKLHRYLGQGERAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLERGVEKFD 154
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ RTIRLP ++ L K+ + ++ +++ T
Sbjct: 155 PTKGYKFSTYAYWWIRQAITRAIAQQGRTIRLPIHITEKLNKIKKTQRELSQQLGRSATP 214
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A+ + + ++ LS +R P+S+ V +QDT E+ D + +PD Y+ ++ M
Sbjct: 215 AEVAKALEIDPSQIREYLSLSRQPISLDVRVGDNQDTELSELLEDEGV-SPDAYITQESM 273
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R+ +NLL L P+++ ++ +RFG+ DG E SL++IG +S+ERVRQLE++AL +LK+
Sbjct: 274 RQDLQNLLAELTPQQQAVLTMRFGLNDGQELSLAKIGQHLNISRERVRQLENQALAQLKR 333
>H0PFH3_9SYNC (tr|H0PFH3) RNA polymerase sigma factor OS=Synechocystis sp. PCC
6803 substr. PCC-P GN=rpoD PE=3 SV=1
Length = 345
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 184/300 (61%), Gaps = 1/300 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E L Q+Q + L E K L + GREP+ EWA+ L
Sbjct: 35 DMVRSYLHEIGRVPLLTHEQEIILGKQVQQMMALLEHKKALADRLGREPSDPEWAEAADL 94
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S L L G R+K K+I ANLR+VV +AK Y R + F DL+QEGS+GL + VEKF
Sbjct: 95 SVTKLHRYLGQGERAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLERGVEKFD 154
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ RTIRLP ++ L K+ + ++ +++ T
Sbjct: 155 PTKGYKFSTYAYWWIRQAITRAIAQQGRTIRLPIHITEKLNKIKKTQRELSQQLGRSATP 214
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A+ + + ++ LS +R P+S+ V +QDT E+ D + +PD Y+ ++ M
Sbjct: 215 AEVAKALEIDPSQIREYLSLSRQPISLDVRVGDNQDTELSELLEDEGV-SPDAYITQESM 273
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R+ +NLL L P+++ ++ +RFG+ DG E SL++IG +S+ERVRQLE++AL +LK+
Sbjct: 274 RQDLQNLLAELTPQQQAVLTMRFGLNDGQELSLAKIGQHLNISRERVRQLENQALAQLKR 333
>H0PAJ0_9SYNC (tr|H0PAJ0) RNA polymerase sigma factor OS=Synechocystis sp. PCC
6803 substr. PCC-N GN=rpoD PE=3 SV=1
Length = 345
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 184/300 (61%), Gaps = 1/300 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E L Q+Q + L E K L + GREP+ EWA+ L
Sbjct: 35 DMVRSYLHEIGRVPLLTHEQEIILGKQVQQMMALLEHKKALADRLGREPSDPEWAEAADL 94
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S L L G R+K K+I ANLR+VV +AK Y R + F DL+QEGS+GL + VEKF
Sbjct: 95 SVTKLHRYLGQGERAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLERGVEKFD 154
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ RTIRLP ++ L K+ + ++ +++ T
Sbjct: 155 PTKGYKFSTYAYWWIRQAITRAIAQQGRTIRLPIHITEKLNKIKKTQRELSQQLGRSATP 214
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A+ + + ++ LS +R P+S+ V +QDT E+ D + +PD Y+ ++ M
Sbjct: 215 AEVAKALEIDPSQIREYLSLSRQPISLDVRVGDNQDTELSELLEDEGV-SPDAYITQESM 273
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R+ +NLL L P+++ ++ +RFG+ DG E SL++IG +S+ERVRQLE++AL +LK+
Sbjct: 274 RQDLQNLLAELTPQQQAVLTMRFGLNDGQELSLAKIGQHLNISRERVRQLENQALAQLKR 333
>H0NY38_9SYNC (tr|H0NY38) RNA polymerase sigma factor OS=Synechocystis sp. PCC
6803 substr. GT-I GN=rpoD PE=3 SV=1
Length = 345
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 184/300 (61%), Gaps = 1/300 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E L Q+Q + L E K L + GREP+ EWA+ L
Sbjct: 35 DMVRSYLHEIGRVPLLTHEQEIILGKQVQQMMALLEHKKALADRLGREPSDPEWAEAADL 94
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S L L G R+K K+I ANLR+VV +AK Y R + F DL+QEGS+GL + VEKF
Sbjct: 95 SVTKLHRYLGQGERAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLERGVEKFD 154
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ RTIRLP ++ L K+ + ++ +++ T
Sbjct: 155 PTKGYKFSTYAYWWIRQAITRAIAQQGRTIRLPIHITEKLNKIKKTQRELSQQLGRSATP 214
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A+ + + ++ LS +R P+S+ V +QDT E+ D + +PD Y+ ++ M
Sbjct: 215 AEVAKALEIDPSQIREYLSLSRQPISLDVRVGDNQDTELSELLEDEGV-SPDAYITQESM 273
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R+ +NLL L P+++ ++ +RFG+ DG E SL++IG +S+ERVRQLE++AL +LK+
Sbjct: 274 RQDLQNLLAELTPQQQAVLTMRFGLNDGQELSLAKIGQHLNISRERVRQLENQALAQLKR 333
>Q2JIA4_SYNJB (tr|Q2JIA4) RNA polymerase sigma factor OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=CYB_2734 PE=3 SV=1
Length = 366
Score = 224 bits (571), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 130/314 (41%), Positives = 195/314 (62%), Gaps = 20/314 (6%)
Query: 250 NDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWA---- 305
D +R++L LL +EE L ++Q+ +L ++++RLQ + GR+PT+AEW
Sbjct: 45 TDLVRLYLQEIGRVPLLGRDEEVALAQKVQDYMKLLDLRLRLQKELGRDPTLAEWVAKAN 104
Query: 306 ---DGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGL 362
+ L+ LQ R G R+KE +I ANLR+VV VAK Y RGL DL+QEG++GL
Sbjct: 105 QYPEWAQLTPEKLQQIQRIGKRAKEHMIKANLRLVVSVAKKYQNRGLELLDLIQEGTLGL 164
Query: 363 MKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNR 422
++VEKF P+ G RF++YAYWWIRQ I RA+ SRTIRLP ++ L K+ +A++ ++
Sbjct: 165 ERAVEKFDPKKGYRFSTYAYWWIRQGITRAIATQSRTIRLPVHITEKLNKIKKAQRKLSQ 224
Query: 423 EGNVHPTKEELARKIGVTVDKLEILLSAARIP--LSMQQTVWTDQDTTYQEITADTAIET 480
E PT E++A ++ +T ++ LL R+P +S++ V D+DT ++ +ET
Sbjct: 225 EKGRTPTIEDIASELEMTPPQVRELL--VRVPRSVSLETKVGKDKDTELGDL-----LET 277
Query: 481 PDVYVAKQLMR----RHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKER 536
D+ + +MR R + LL L RER +IR+RFG+ DG SL+EIG LS+ER
Sbjct: 278 DDISPEETMMREALHRDLQQLLSDLTSRERDVIRMRFGLGDGRTYSLAEIGRALDLSRER 337
Query: 537 VRQLESRALDKLKQ 550
VRQ+E++AL KL+Q
Sbjct: 338 VRQIEAKALQKLRQ 351
>D8FXC8_9CYAN (tr|D8FXC8) RNA polymerase sigma factor OS=Oscillatoria sp. PCC
6506 GN=sigB PE=3 SV=1
Length = 334
Score = 224 bits (571), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 123/301 (40%), Positives = 184/301 (61%), Gaps = 1/301 (0%)
Query: 250 NDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVG 309
D +R +L LLT E+E Q+Q + +L E K L + REPT EWA V
Sbjct: 24 TDTVRTYLHEIGRVALLTREQEIIYGKQVQQMMQLLEAKEELAKELRREPTEVEWALQVQ 83
Query: 310 LSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKF 369
LS L+ + G R+K+K+I ANLR+VV +AK Y R + F DL+QEG++GL + VEKF
Sbjct: 84 LSEAELKRLMHQGRRAKQKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGTLGLERGVEKF 143
Query: 370 KPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPT 429
P G +F++YAYWWIRQ I RA+ H+RTIRLP ++ L K+ + ++ ++ PT
Sbjct: 144 DPMRGYKFSTYAYWWIRQAITRAIAQHARTIRLPIHITEKLNKIKKVQRELAQQLGRSPT 203
Query: 430 KEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQL 489
E+ + + ++ L AR P+S+ V +QDT QE+ D + +PD Y+ +L
Sbjct: 204 PAEIGSALELHPSQIREYLLMARHPVSLDLRVGDNQDTELQELLEDESA-SPDDYITGEL 262
Query: 490 MRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
+R+ NL+ L P++R ++ LRFG+EDG+E SL+++G LS+ERVRQLE +AL L+
Sbjct: 263 LRQDLNNLMAELTPQQRDVLSLRFGLEDGHEMSLAKVGERLKLSRERVRQLEHQALAHLR 322
Query: 550 Q 550
+
Sbjct: 323 R 323
>K2A8X5_9BACT (tr|K2A8X5) RNA polymerase sigma factor OS=uncultured bacterium
GN=ACD_57C00003G0002 PE=3 SV=1
Length = 448
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 118/319 (36%), Positives = 197/319 (61%), Gaps = 9/319 (2%)
Query: 250 NDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVG 309
+DP+RM+L LLT ++E +L +Q F+ RL + GR+PT+ E A +G
Sbjct: 130 SDPVRMYLREIGKVDLLTAKQEIEL-AQCAEAFKFRRTDKRLAKELGRKPTLPEIAVEMG 188
Query: 310 LSCYALQTQLRS--------GTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMG 361
L ++ ++ G ++ LI ANLR+VV +AK Y+GRGL+F DL+QEG++G
Sbjct: 189 LDKKVIKAVEKTSKDWNDKQGEAAERMLIQANLRLVVSIAKKYMGRGLTFLDLIQEGNIG 248
Query: 362 LMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYN 421
LM++VEKF + G +F++YA WWIRQ I RAL SRTIR+P ++ + K ++
Sbjct: 249 LMRAVEKFDWRRGFKFSTYATWWIRQAITRALADQSRTIRIPVHMVETINKYKRIERELE 308
Query: 422 REGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETP 481
++ PT EE+++++G+ ++K + +L ++ S++ V ++DT +E D +P
Sbjct: 309 QKYERPPTAEEVSKEMGIEIEKAQEILKISQDTTSLETPVGKEEDTRLKEFIPDEVGLSP 368
Query: 482 DVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLE 541
+++L++ H +L TLNPRER+++ LRFG++DG ++L E+G FG+++ER+RQ+E
Sbjct: 369 FESASQELLKGHINEVLDTLNPRERKVLELRFGLKDGRSRTLEEVGRDFGVTRERIRQIE 428
Query: 542 SRALDKLKQCLASHGLDAY 560
++AL KL+ S L Y
Sbjct: 429 AKALRKLRHPSRSKKLKDY 447
>K9T8P2_9CYAN (tr|K9T8P2) RNA polymerase sigma factor OS=Pleurocapsa sp. PCC 7327
GN=Ple7327_3573 PE=3 SV=1
Length = 328
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 184/300 (61%), Gaps = 1/300 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E Q+Q + L E K L S+ G EP++ EWA+ V L
Sbjct: 18 DMVRTYLHEIGRVPLLTHEQEIVYGKQVQRMMTLLEKKEELASKLGHEPSLTEWANYVQL 77
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
L + G R+K K+I ANLR+VV +AK Y R + F DL+QEGS+GL + VEKF
Sbjct: 78 GEDELNRAIAQGNRAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLERGVEKFD 137
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ + ++ ++ T
Sbjct: 138 PTKGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKKTQRELAQQLGRSATP 197
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A+ + + ++ LS AR P+S+ V +QDT ++ D I +PD Y+ ++L+
Sbjct: 198 GEIAQALDLEPAQIREYLSMARQPVSLDVRVGDNQDTELSDLLEDEGI-SPDNYITQELL 256
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R+ NL+ L P++R ++ LRFG+EDG E SL++IG +S+ERVRQLE +AL +L++
Sbjct: 257 RQDLNNLMAELTPQQREVLSLRFGLEDGKELSLAKIGQRLNISRERVRQLEHQALAQLRR 316
>Q2JJL6_SYNJB (tr|Q2JJL6) RNA polymerase sigma factor OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=rpoD PE=3 SV=1
Length = 403
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/316 (37%), Positives = 200/316 (63%), Gaps = 6/316 (1%)
Query: 250 NDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFG-----REPTMAEW 304
+D +R++L +LL +EE +L +I +L LE + + + G E W
Sbjct: 87 DDSIRVYLQEIGRIRLLRADEEIELARKIADLLELERAREAVFQRMGLWSDPEEVPDTLW 146
Query: 305 ADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMK 364
A+ V +S + +L G R+KEK++ +NLR+VV +AK Y+ RGLSFQDL+QEGS+GL++
Sbjct: 147 AEEVKMSLPEFRRRLHRGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIR 206
Query: 365 SVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREG 424
+ EKF + G +F++YA WWIRQ I RA+ SRTIRLP ++Y + ++ + K ++E
Sbjct: 207 AAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKVTKLLSQEL 266
Query: 425 NVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVY 484
PT+EE+A ++ +T++KL + +A++P+S++ + ++D+ + ETP+
Sbjct: 267 GRKPTEEEIATRMEITIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIESDG-ETPEDR 325
Query: 485 VAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRA 544
VAK L+R ++L TL RER +++LR+G++DG K+L EIG +F +++ER+RQ+E++A
Sbjct: 326 VAKVLLREDLESVLETLTARERDVLKLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKA 385
Query: 545 LDKLKQCLASHGLDAY 560
L KL+ + L Y
Sbjct: 386 LRKLRHPNRNSVLKEY 401
>B7K407_CYAP8 (tr|B7K407) RNA polymerase sigma factor OS=Cyanothece sp. (strain
PCC 8801) GN=PCC8801_2539 PE=3 SV=1
Length = 328
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/312 (39%), Positives = 188/312 (60%), Gaps = 1/312 (0%)
Query: 239 VEKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGRE 298
V K K+ + D +R +L LLT E+E Q+Q + L E+K +L G E
Sbjct: 6 VNSKTKQPMYSADMVRTYLHEIGRVPLLTHEQEIVYGKQVQRMMSLFEMKDQLTQAQGTE 65
Query: 299 PTMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEG 358
P+ EWA V L L+ + G R+K K+I ANLR+VV +AK Y R + F DL+QEG
Sbjct: 66 PSDKEWAKAVNLKEPELKKTIEQGNRAKRKMIEANLRLVVAIAKKYQKRNMEFLDLIQEG 125
Query: 359 SMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKK 418
S+GL + VEKF P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ + ++
Sbjct: 126 SLGLERGVEKFDPTKGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKKTQR 185
Query: 419 FYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAI 478
+++ T E+A + + ++ LS AR P+S+ V +QDT E+ D
Sbjct: 186 ELSQKLGRSATPAEIAAVLEIEPSQIRECLSMARQPISLDVRVGDNQDTELSELLEDHEA 245
Query: 479 ETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVR 538
+PD Y+ ++L+R+ +NL+ L P++R ++ LRFG+EDG E SL++IG +S+ERVR
Sbjct: 246 -SPDQYITQELLRQDLKNLMEELTPQQRSVLILRFGLEDGKELSLAKIGKKLNISRERVR 304
Query: 539 QLESRALDKLKQ 550
QLE +AL +L++
Sbjct: 305 QLEHQALAQLRR 316
>K9Z5T0_CYAAP (tr|K9Z5T0) RNA polymerase sigma factor OS=Cyanobacterium aponinum
(strain PCC 10605) GN=Cyan10605_2465 PE=3 SV=1
Length = 332
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 186/304 (61%), Gaps = 1/304 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LL+ E+E Q+Q + L EVK L+ RE T+ EWA
Sbjct: 22 DMVRTYLQEIGKVPLLSHEQEIVFGKQVQQMMSLYEVKENLEKNLEREVTLEEWAQKADK 81
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
+ ++ + G R+K+K+I ANLR+VV +AK Y R + F DL+QEGS+GL + VEKF
Sbjct: 82 TPNEVKKIIHQGKRAKQKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLERGVEKFD 141
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ + ++ +++ P+
Sbjct: 142 PTKGFKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKKTQRELSQKLGRSPSP 201
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A + + ++ S AR P+S+ V +QDT E+ D + +PD Y+ ++LM
Sbjct: 202 NEIAEALQLEPAQIREYFSIARQPISLDVKVGDNQDTELSELLEDEGV-SPDNYITQELM 260
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R+ + LL L P++++++RLRFG+EDG E SL++IG +S+ERVRQLE +AL L++
Sbjct: 261 RQDLQKLLGELTPQQQQVVRLRFGLEDGKELSLAKIGQRMNISRERVRQLEQQALAHLRK 320
Query: 551 CLAS 554
+S
Sbjct: 321 KRSS 324
>K9SDK2_9CYAN (tr|K9SDK2) RNA polymerase sigma factor OS=Geitlerinema sp. PCC
7407 GN=GEI7407_3773 PE=3 SV=1
Length = 365
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/297 (39%), Positives = 185/297 (62%), Gaps = 1/297 (0%)
Query: 265 LLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQTQLRSGTR 324
LL +EE +L IQ L +EE++ + + + GR P AE AD +GL+ L+ +L
Sbjct: 67 LLKPDEEVELARHIQQLNEIEELRAQFEEEHGRRPNKAELADALGLTERQLEQRLHRSQV 126
Query: 325 SKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWW 384
+K K+I +NLR+VV +AK YL RG+ F DL+QEG+MGL ++ EKF P G +F++YAYWW
Sbjct: 127 AKRKMIRSNLRLVVSIAKRYLNRGVPFLDLIQEGAMGLNRATEKFDPDKGYKFSTYAYWW 186
Query: 385 IRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKL 444
IRQ I R + +RTIRLP ++ L KL +A++ R+ PT+ ELA + +T ++L
Sbjct: 187 IRQGITRTIANDARTIRLPIHIVEKLNKLKKAQRELRRDLKRPPTEAELATVLEITEEQL 246
Query: 445 EILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRH-ARNLLHTLNP 503
+ LL R LS+ V ++DT ++ D +P+ +++++MR+ A L L
Sbjct: 247 QQLLQVRRQSLSLNVRVGREEDTELVDLLEDNNSRSPEAQMSERMMRQEIAEVLSEVLTE 306
Query: 504 RERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGLDAY 560
RE+ I+ LR+GIE G +L E+G +F LS+ERVRQ+++RA+ KL++ + L +
Sbjct: 307 REKEIVCLRYGIETGETHTLEEVGNIFNLSRERVRQIQTRAMRKLRRPQVARRLQGW 363
>B2J7M4_NOSP7 (tr|B2J7M4) RNA polymerase sigma factor OS=Nostoc punctiforme
(strain ATCC 29133 / PCC 73102) GN=Npun_R4091 PE=3 SV=1
Length = 327
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 122/304 (40%), Positives = 185/304 (60%), Gaps = 1/304 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E Q+Q + L + K L + REP M+EWAD V
Sbjct: 18 DMVRTYLREIGRVPLLTREQEIVYGKQVQQMMTLIDAKEVLAKKLHREPDMSEWADVVQQ 77
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S +Q + G R+K+K+I ANLR+VV +AK Y R + F DL+QEG++GL + VEKF
Sbjct: 78 SETEVQQTVAQGKRAKQKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGTLGLERGVEKFD 137
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ RTIRLP ++ L K+ + ++ + PT
Sbjct: 138 PMRGYKFSTYAYWWIRQAITRAIAQQGRTIRLPIHITEKLNKIKKVQRELAQTLGRSPTP 197
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A+++ + ++ L+ AR P+S+ V +QDT QE+ D+ +P+ Y ++ +
Sbjct: 198 AEIAKELELEPAQIREYLNMARQPVSLDVKVGDNQDTELQEMLEDSG-PSPEYYTNQEFL 256
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R+ NLL L P++R ++ LRFG+EDG E SL+++G LS+ERVRQLE +AL L++
Sbjct: 257 RQDLNNLLAELTPQQREVLALRFGLEDGNEMSLAKVGERLNLSRERVRQLEHQALAHLRR 316
Query: 551 CLAS 554
A+
Sbjct: 317 RRAN 320
>B4WSK5_9SYNE (tr|B4WSK5) RNA polymerase sigma factor, cyanobacterial RpoD-like
family OS=Synechococcus sp. PCC 7335 GN=S7335_2811 PE=4
SV=1
Length = 298
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 114/286 (39%), Positives = 175/286 (61%), Gaps = 1/286 (0%)
Query: 265 LLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQTQLRSGTR 324
LLT EEE L Q+Q L L + L REPT EWA G+S L + +G +
Sbjct: 3 LLTHEEEILLGKQVQKLMSLIAIHSSLVDTLDREPTRTEWAAAGGISEAELAAIVTAGEQ 62
Query: 325 SKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWW 384
+K +++ ANLR+VV VAK Y+ R + DL+QEG++G+ + VEKF P G RF++YAYWW
Sbjct: 63 AKHRMVEANLRLVVSVAKKYIKRNVDLLDLIQEGTIGMQRGVEKFDPSKGYRFSTYAYWW 122
Query: 385 IRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKL 444
IRQ I RA+ SRTIRLP ++ L K+ +A++ + ++ PT E+A+ G T+ ++
Sbjct: 123 IRQAITRAIAEKSRTIRLPIHITEKLNKIKKAQRQFTQQHGRTPTASEIAQATGFTIKQV 182
Query: 445 EILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHARNLLHTLNPR 504
L +R PLS+ V +QDT ++ D +TPD Y ++ + ++ L P+
Sbjct: 183 REYLDRSRQPLSLDLKVGDNQDTQLGDLLEDDG-QTPDDYATASSLKSDLKRIMADLTPQ 241
Query: 505 ERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
++++I LRFG+EDG +L++IG + +S+ERVRQ+E AL KL++
Sbjct: 242 QQQVIALRFGLEDGKNMTLAKIGAMLDISRERVRQIEREALTKLRK 287
>K9SH00_9CYAN (tr|K9SH00) RNA polymerase sigma factor OS=Pseudanabaena sp. PCC
7367 GN=Pse7367_0768 PE=3 SV=1
Length = 346
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/304 (40%), Positives = 184/304 (60%), Gaps = 1/304 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT EEE ++Q L RL E+ L Q R+PT AEWAD GL
Sbjct: 37 DMVRTYLHEIGKIPLLTSEEEIIFGKRVQQLMRLSELYEDLAEQLDRQPTQAEWADKAGL 96
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
+ L+ +R GTRSK K+I ANLR+VV VAK Y R L DL+QEG++GL ++V+KF
Sbjct: 97 NIEELEQIVRDGTRSKRKMIEANLRLVVSVAKKYQKRNLELLDLVQEGTLGLERAVDKFD 156
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ +A++ ++ T
Sbjct: 157 PTKGFKFSTYAYWWIRQAITRAIAQQARTIRLPVHITEKLNKIKKAQRQLSQSLGRVATA 216
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A + + +++ LS AR P+S+ + +QDT E+ D ++P+ + + +
Sbjct: 217 AEIADALKLKPEQVREFLSMARQPVSLDLRIGDNQDTELAELLEDEG-DSPESFALSESL 275
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R LL L P++R ++ +R+G+EDG E SL+ I LS+E+VRQLE +A+D L++
Sbjct: 276 RDDIAGLLLDLTPKQREVMIMRYGLEDGKEMSLASISKRMELSREQVRQLERQAMDSLRK 335
Query: 551 CLAS 554
A+
Sbjct: 336 RKAA 339
>Q10XF4_TRIEI (tr|Q10XF4) RNA polymerase, sigma 28 subunit OS=Trichodesmium
erythraeum (strain IMS101) GN=Tery_4058 PE=4 SV=1
Length = 319
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/286 (40%), Positives = 176/286 (61%), Gaps = 1/286 (0%)
Query: 265 LLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQTQLRSGTR 324
LL+ EEE Q+Q L L+E L GREPT+ EWA+ LS LQ +R G R
Sbjct: 24 LLSHEEEILYGKQVQRLTALQEFNQTLAEALGREPTLLEWAEAKELSKSELQRIIREGER 83
Query: 325 SKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWW 384
+K K++ ANLR+VV VAK Y+ R + DL+QEG++G+ + VEKF P G RF++YAYWW
Sbjct: 84 AKRKMVEANLRLVVSVAKKYIKRNVDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWW 143
Query: 385 IRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKL 444
IRQ I RA+ RTIRLP ++ L K+ + ++ ++ T E+A ++G+T ++
Sbjct: 144 IRQAITRAIAEKGRTIRLPIHITEKLNKIKKVQRQLTQQLGRSATTGEIAEELGLTPKQI 203
Query: 445 EILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHARNLLHTLNPR 504
L AR+PLS+ V +QDT ++ DT +P+ Y + MR +++ L P+
Sbjct: 204 RECLERARLPLSLDLRVGDNQDTELGDLLEDTGA-SPEDYALQSSMRTDLESIMVDLTPQ 262
Query: 505 ERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
+++++ LRFG+EDG +LS+IG +S+ERVRQ+E AL KL++
Sbjct: 263 QKQVLALRFGLEDGQTMTLSKIGAHLNISRERVRQIEREALSKLRK 308
>H1WB17_9CYAN (tr|H1WB17) RNA polymerase sigma factor OS=Arthrospira sp. PCC 8005
GN=sigB PE=3 SV=1
Length = 332
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 188/300 (62%), Gaps = 1/300 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT EEE ++Q + L E++ L + R+PT AEW+ GL
Sbjct: 23 DAVRTYLHEIGRVPLLTREEEIIYGKKVQQMMSLLEMRDELTKELDRDPTAAEWSAKAGL 82
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
S + + G R+K+K+I ANLR+VV +AK Y R + F DL+QEG++GL + VEKF
Sbjct: 83 SESEMTEIMNRGRRAKQKMIEANLRLVVSIAKKYQKRNMEFLDLIQEGTLGLERGVEKFD 142
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ +SRTIRLP ++ L K+ + ++ ++ + T
Sbjct: 143 PMRGYKFSTYAYWWIRQAITRAIAQNSRTIRLPIHITEKLNKIKKVQRELFQQYGRNATP 202
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A+ + + ++ L A+R P+S+ V +QDT Q++ D + + D YV +QL+
Sbjct: 203 TEIAKALDLEPSQIRDYLLASRHPVSLDLRVGDNQDTELQDLLEDESA-SADNYVTQQLL 261
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R+ ++L+ L P++R ++ LR+G+ DG E SLS++G +S+ERVRQLE++AL+ L++
Sbjct: 262 RQDLKDLMADLTPQQREVLTLRYGLNDGKEMSLSKVGVHMNISRERVRQLENQALNHLRR 321
>B2IZW2_NOSP7 (tr|B2IZW2) RNA polymerase sigma factor OS=Nostoc punctiforme
(strain ATCC 29133 / PCC 73102) GN=Npun_F3293 PE=3 SV=1
Length = 332
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/311 (38%), Positives = 185/311 (59%), Gaps = 8/311 (2%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E Q+Q + L K +L Q R+PT EW + + +
Sbjct: 23 DTVRAYLREIGRIPLLTHEQEINFAKQVQKMMALLATKEKLAIQLKRQPTQKEWIENINI 82
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
+L QL G ++K+K+I ANLR+VV +AK Y L F DL+QEGS+GL + VEKF
Sbjct: 83 GEKSLLQQLHQGQKAKQKMIQANLRLVVSIAKKYQRHNLDFLDLIQEGSLGLERGVEKFD 142
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++Y YWWIRQ I RA+ RTIRLP ++ L K+ ++ ++ PT
Sbjct: 143 PTKGYKFSTYGYWWIRQAITRAIAEQGRTIRLPIHITEKLNKIKRIQRELTQKLGRTPTA 202
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
++A ++ + ++ L AR P+S++ V +D+D Q++ D + +P++Y + +
Sbjct: 203 VDIAEELSLDPKQIRDYLLLARQPVSLELRVGSDKDIELQDMLEDNGL-SPELYADHKFL 261
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRAL----- 545
+++ +NLL LNP++R+I+ RFG+ DG E SL+EIG G+S+ERVRQ+E +AL
Sbjct: 262 QQNIQNLLSKLNPQQRQILTFRFGLTDGNELSLAEIGQRMGISRERVRQIEQQALGSLRR 321
Query: 546 --DKLKQCLAS 554
DK+ LAS
Sbjct: 322 HKDKIHSYLAS 332
>K9U8Z9_9CYAN (tr|K9U8Z9) RNA polymerase sigma factor OS=Chroococcidiopsis
thermalis PCC 7203 GN=Chro_5941 PE=3 SV=1
Length = 335
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/285 (42%), Positives = 177/285 (62%), Gaps = 1/285 (0%)
Query: 265 LLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGLSCYALQTQLRSGTR 324
LL+ E+E Q+Q + L K L Q REPT+ EWA+ + LS ALQ QL +G +
Sbjct: 39 LLSHEQEIVFGKQVQQMIALVTAKENLAKQLQREPTLQEWAELMHLSDKALQKQLLAGQQ 98
Query: 325 SKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWW 384
+K+K+I ANLR+VV VAK Y R L F DL+QEG++GL + VEKF P G RF++YAYWW
Sbjct: 99 AKQKMIEANLRLVVAVAKKYQKRNLDFLDLIQEGTLGLERGVEKFDPTRGFRFSTYAYWW 158
Query: 385 IRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVTVDKL 444
IRQ + RA+ SRTIRLP ++ L K+ ++ +++ PT E+A I + +++
Sbjct: 159 IRQGVTRAIAQQSRTIRLPIHMTEKLNKIKRTQRELSQKLGRTPTSIEIAEAIDLQPEQV 218
Query: 445 EILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHARNLLHTLNPR 504
L AR P+S++ + +QDT Q I D + P+ Y ++ +R +N+L L +
Sbjct: 219 RECLLLARHPISLEARIGDEQDTELQNILQDDGL-LPESYAVRESIRESVQNILSKLPTQ 277
Query: 505 ERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLK 549
+R I+ LRFG+ DG E SL++IG G+S+ERVRQLE +A L+
Sbjct: 278 QREILTLRFGLADGNELSLAQIGQRMGISRERVRQLEQQAFSFLR 322
>K9YNZ9_CYASC (tr|K9YNZ9) RNA polymerase sigma factor OS=Cyanobacterium stanieri
(strain ATCC 29140 / PCC 7202) GN=Cyast_1868 PE=3 SV=1
Length = 328
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/311 (38%), Positives = 185/311 (59%), Gaps = 1/311 (0%)
Query: 244 KEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAE 303
K+ ++ D +R +L LL+ E+E Q+Q + L K L REPT+ E
Sbjct: 11 KKKVNTVDMVRTYLQEIGKVPLLSHEQEIVFGKQVQIMMSLYAQKEELAENLDREPTLEE 70
Query: 304 WADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLM 363
WA + L+ + G R+K+K+I ANLR+VV +AK Y R + F DL+QEGS+GL
Sbjct: 71 WAQAAEKTPAELKKLIHQGKRAKQKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGSLGLE 130
Query: 364 KSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNRE 423
+ VEKF P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ + ++ +++
Sbjct: 131 RGVEKFDPTKGFKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKKTQRELSQK 190
Query: 424 GNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDV 483
P + E+A + + ++ S AR P+S+ V +QDT E+ D + +PD
Sbjct: 191 LGRSPNQSEIANALDLEPSQIREYFSIARQPISLDVKVGDNQDTELSELLEDEGL-SPDK 249
Query: 484 YVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESR 543
Y+ ++LMR+ LL L +++ ++RLRFG++DG E SL++IG G+S+ERVRQLE +
Sbjct: 250 YITQELMRQDLHKLLDELTTQQQEVVRLRFGLDDGKELSLAKIGQRMGISRERVRQLEQQ 309
Query: 544 ALDKLKQCLAS 554
AL L++ S
Sbjct: 310 ALAHLRKKRGS 320
>K9RCV1_9CYAN (tr|K9RCV1) RNA polymerase sigma factor OS=Rivularia sp. PCC 7116
GN=Riv7116_3322 PE=3 SV=1
Length = 327
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 185/304 (60%), Gaps = 1/304 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LLT E+E Q+Q + +L E K L + GRE ++ EW VGL
Sbjct: 18 DMVRTYLREIGRVPLLTREQEIIFGKQVQKMMKLVEAKEALAKKLGREVSLEEWTQEVGL 77
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
+ L+ + G R+K+K+I ANLR+VV +AK Y R + F DL+QEG++GL + VEKF
Sbjct: 78 AETELKKTVLEGKRAKQKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGALGLERGVEKFD 137
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ RTIRLP ++ L K+ + ++ ++ P
Sbjct: 138 PTRGYKFSTYAYWWIRQAITRAIAQQGRTIRLPIHITEKLNKIKKVQRELAQKLGRSPIP 197
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A+++ + ++ L+ AR P+S+ V +QDT QE+ D +P+ Y ++ +
Sbjct: 198 SEIAKELDLEPAQIREYLNMARQPVSLDVRVGDNQDTELQEMLEDDG-PSPEYYTTQEFL 256
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R+ NLL L P++R+++ LRFG+ DG E SL+++G LS+ERVRQLE +AL L++
Sbjct: 257 RQDLNNLLAELTPQQRQVLALRFGLSDGNEMSLAKVGERLSLSRERVRQLEHQALAHLRR 316
Query: 551 CLAS 554
A+
Sbjct: 317 RRAN 320
>L8M4M2_9CYAN (tr|L8M4M2) RNA polymerase sigma factor OS=Xenococcus sp. PCC 7305
GN=Xen7305DRAFT_00045350 PE=3 SV=1
Length = 328
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 125/311 (40%), Positives = 186/311 (59%), Gaps = 1/311 (0%)
Query: 240 EKKLKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREP 299
EK K D +R +L LLT E+E Q+Q + L K L+ Q RE
Sbjct: 8 EKTTKTTKQSADMVRSYLHEIGRVPLLTNEQEIVYGKQVQAMMALLIKKSELEKQLEREI 67
Query: 300 TMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGS 359
++ EW++ +S L L+ G R+K K+I ANLR+VV +AK Y R + F DL+QEGS
Sbjct: 68 SLQEWSESAQISEPELNRLLKLGQRAKSKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGS 127
Query: 360 MGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKF 419
+GL + VEKF P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ + ++
Sbjct: 128 LGLERGVEKFDPMKGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKKTQRE 187
Query: 420 YNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIE 479
+++ +P E+A ++ + ++ LS AR P+S+ V +QDT E+ D I
Sbjct: 188 LSQKLGRNPNPREIAAELELETSQIREYLSIARQPISLDVRVGDNQDTELSELLEDDGI- 246
Query: 480 TPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQ 539
+PD Y ++L+R+ NL+ L P +R +I LRFG+EDG E SL++IG LS+ERVRQ
Sbjct: 247 SPDKYATQELLRQDLYNLMADLTPPQREVISLRFGLEDGKELSLAKIGQRMSLSRERVRQ 306
Query: 540 LESRALDKLKQ 550
LE +AL +L++
Sbjct: 307 LEHQALAQLRR 317
>I4IAS0_9CHRO (tr|I4IAS0) RNA polymerase sigma factor rpoD3 OS=Microcystis sp.
T1-4 GN=rpoD PE=4 SV=1
Length = 318
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 190/312 (60%), Gaps = 1/312 (0%)
Query: 243 LKEGLDQNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMA 302
+K + DP+R +L LLT EEE Q+Q L LE++K L+SQ GREP+
Sbjct: 1 MKTSKNPTDPVRSYLREIGRVPLLTHEEEILYAKQVQRLIFLEKIKESLRSQLGREPSDR 60
Query: 303 EWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGL 362
+W++ +S L+ +L +G +K K++ ANLR+VV VAK YL R L DL+QEG++G+
Sbjct: 61 QWSEAAEISEEQLRRELGAGDFAKRKMVEANLRLVVSVAKKYLKRNLDLLDLIQEGTIGM 120
Query: 363 MKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNR 422
+ VEKF P G RF++YAYWWIRQ I RA+ SRTIRLP ++ L K+ +A++ +
Sbjct: 121 QRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKSRTIRLPIHITEKLNKIKKAQRQLAQ 180
Query: 423 EGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPD 482
+ T ELA ++ +T ++ L +R PLS+ V +QDT E+ DT + +P+
Sbjct: 181 DKGRAATIAELAEELDLTPKQVRDYLERSRQPLSLDLKVGDNQDTELGELLEDTGL-SPE 239
Query: 483 VYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLES 542
Y A ++ L+ L P+++ +I LRFG+++G +L++IG +S+ERVRQ+E
Sbjct: 240 DYTAYSSLQVDLEKLMADLTPQQKEVICLRFGLDNGQPLTLAKIGVRLNISRERVRQIER 299
Query: 543 RALDKLKQCLAS 554
A+ KL++ A+
Sbjct: 300 EAIAKLRKRRAN 311
>K8F5W9_9CHLO (tr|K8F5W9) RNA polymerase sigma factor RpoD OS=Bathycoccus
prasinos GN=Bathy05g01070 PE=4 SV=1
Length = 733
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 117/314 (37%), Positives = 191/314 (60%), Gaps = 12/314 (3%)
Query: 249 QNDPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQF--GREP------- 299
Q D ++++L + LL EE QL +IQ+L LE L ++ G +P
Sbjct: 376 QVDSMKVYLKEIGSVSLLNANEEVQLARKIQDLMNLETTYKELVAKVAEGNDPIAQTHGD 435
Query: 300 --TMAEWADGVGLSCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQE 357
T + WA +GL+ + L+ +L G +K +I ANLR+VV +AK Y R +SFQDL+QE
Sbjct: 436 KVTKSMWARELGLTEFELEMRLTEGKNAKNHMIQANLRLVVSIAKRYANRNMSFQDLIQE 495
Query: 358 GSMGLMKSVEKFKPQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAK 417
G +GL++ EKF + G +F++YA+WWIRQ + R++ SRTIRLP +++ ++ ++ + +
Sbjct: 496 GCVGLIRGAEKFDFERGYKFSTYAHWWIRQAVTRSISDQSRTIRLPVHLFEIISRMNKLE 555
Query: 418 KFYNREGNVHPTKEELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDT-TYQEITADT 476
+ + + T EE++ + + K+ + AA P+S+ Q V D D T ++ D
Sbjct: 556 QKFIVQNGREATLEEISAMMEMPQVKITQIKKAAMAPVSLAQAVGADDDKRTVEDTLVDN 615
Query: 477 AIETPDVYVAKQLMRRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKER 536
E P+ K L++ N+L+TLNPRER ++RLR+G++DG K+L EIG VF +++ER
Sbjct: 616 ITEHPEESSGKVLLKEDLENVLNTLNPRERDVLRLRYGLDDGRVKTLEEIGNVFSVTRER 675
Query: 537 VRQLESRALDKLKQ 550
+RQ+E++AL KL+Q
Sbjct: 676 IRQIEAKALRKLRQ 689
>C7QVB1_CYAP0 (tr|C7QVB1) RNA polymerase, sigma 70 subunit, RpoD subfamily
OS=Cyanothece sp. (strain PCC 8802) GN=Cyan8802_3060
PE=4 SV=1
Length = 318
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 183/300 (61%), Gaps = 1/300 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
DP+R +L LLT EEE ++Q LE +K L + G+EPT+A+WA +
Sbjct: 9 DPVRAYLREIGRVPLLTHEEEILYAKRVQRFVALETLKESLTEELGQEPTIAQWAKAAKM 68
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
+ L++ + +G +K K++ ANLR+VV VAK YL R L DL+QEG++G+ + VEKF
Sbjct: 69 TQKELRSAIEAGEAAKRKMVEANLRLVVSVAKKYLKRNLDLLDLIQEGTIGMQRGVEKFD 128
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G RF++YAYWWIRQ I RA+ SRTIRLP ++ L K+ +A++ ++E T
Sbjct: 129 PTKGYRFSTYAYWWIRQAITRAIAEKSRTIRLPIHITEKLNKIKKAQRQLSQEKGRAATI 188
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
ELA ++ +T ++ L AR PLS+ V +QDT ++ DT ++P+ Y +
Sbjct: 189 AELAEELELTPRQVREYLERARQPLSLDLRVGDNQDTELGDLLEDTG-QSPEDYATHSSL 247
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
+ L+ L P+++ ++ LRFG+ DG +L++IG++ +S+ERVRQ+E AL KL++
Sbjct: 248 QLDLDRLMEELTPQQKEVLALRFGLSDGKPLTLAKIGSILNISRERVRQIEREALAKLRK 307
>B7JX54_CYAP8 (tr|B7JX54) RNA polymerase, sigma 70 subunit, RpoD subfamily
OS=Cyanothece sp. (strain PCC 8801) GN=PCC8801_3061 PE=4
SV=1
Length = 318
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 183/300 (61%), Gaps = 1/300 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
DP+R +L LLT EEE ++Q LE +K L + G+EPT+A+WA +
Sbjct: 9 DPVRAYLREIGRVPLLTHEEEILYAKRVQRFVALETLKESLTEELGQEPTIAQWAKAAKM 68
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
+ L++ + +G +K K++ ANLR+VV VAK YL R L DL+QEG++G+ + VEKF
Sbjct: 69 TQKELRSAIEAGEAAKRKMVEANLRLVVSVAKKYLKRNLDLLDLIQEGTIGMQRGVEKFD 128
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G RF++YAYWWIRQ I RA+ SRTIRLP ++ L K+ +A++ ++E T
Sbjct: 129 PTKGYRFSTYAYWWIRQAITRAIAEKSRTIRLPIHITEKLNKIKKAQRQLSQEKGRAATI 188
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
ELA ++ +T ++ L AR PLS+ V +QDT ++ DT ++P+ Y +
Sbjct: 189 AELAEELELTPRQVREYLERARQPLSLDLRVGDNQDTELGDLLEDTG-QSPEDYATHSSL 247
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
+ L+ L P+++ ++ LRFG+ DG +L++IG++ +S+ERVRQ+E AL KL++
Sbjct: 248 QLDLDRLMEELTPQQKEVLALRFGLSDGKPLTLAKIGSILNISRERVRQIEREALAKLRK 307
>L8N838_9CYAN (tr|L8N838) RNA polymerase sigma factor OS=Pseudanabaena biceps PCC
7429 GN=Pse7429DRAFT_0490 PE=3 SV=1
Length = 336
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 120/300 (40%), Positives = 186/300 (62%), Gaps = 1/300 (0%)
Query: 251 DPLRMFLWGPETKKLLTFEEESQLISQIQNLFRLEEVKIRLQSQFGREPTMAEWADGVGL 310
D +R +L LL+ EEE Q+Q + L EV+ ++ R PT EWA+ VGL
Sbjct: 27 DMVRTYLHEIGKIPLLSNEEEIVYGKQVQQMMLLFEVQEKIAHNSDRLPTEQEWAEAVGL 86
Query: 311 SCYALQTQLRSGTRSKEKLIHANLRMVVHVAKNYLGRGLSFQDLLQEGSMGLMKSVEKFK 370
L + +R GTR+K K+I ANLR+VV VAK Y R L DL+QEG++GL ++V+KF
Sbjct: 87 EPEILHSNIRIGTRAKRKMIEANLRLVVSVAKKYQKRNLELLDLVQEGTLGLERAVDKFD 146
Query: 371 PQAGCRFASYAYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTK 430
P G +F++YAYWWIRQ I RA+ +RTIRLP ++ L K+ +A++ +++ T
Sbjct: 147 PTKGFKFSTYAYWWIRQAITRAIAQQARTIRLPVHITEKLNKIKKAQRQLSQDLGRVATV 206
Query: 431 EELARKIGVTVDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLM 490
E+A ++ + D++ LS +R P+S+ + +QDT E+ DT +PD YV ++ +
Sbjct: 207 AEIAHELKIKTDQVRECLSLSRQPISLDLRIGDNQDTELAELLEDTG-RSPDNYVERESL 265
Query: 491 RRHARNLLHTLNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQ 550
R ++LL L ++R+++ LR+G+EDG E SL+ I LS+E+VRQLE +A+D L++
Sbjct: 266 RTDIQSLLKELPEKQRQVMVLRYGLEDGQEMSLASISKRMDLSREQVRQLERQAMDYLRK 325