Miyakogusa Predicted Gene
- Lj5g3v0616290.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0616290.1 Non Chatacterized Hit- tr|I1L8R7|I1L8R7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45005 PE,79.76,0,Hect,
E3 ligase catalytic domain,HECT; HECT,HECT; HECT UBIQUITIN-PROTEIN
LIGASE 3 (KAKTUS PROTEIN),N,CUFF.53526.1
(3231 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO024143 similar to UniRef100_A7PSS0 Cluster: Chromosom... 1435 0.0
gnl|LJGI|TC65536 similar to UniRef100_A7PSS0 Cluster: Chromosome... 987 0.0
gnl|LJGI|AU251899 similar to UniRef100_A7PSS0 Cluster: Chromosom... 281 1e-74
gnl|LJGI|BP056084 56 1e-06
>gnl|LJGI|GO024143 similar to UniRef100_A7PSS0 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 731
Score = 1435 bits (724), Expect = 0.0
Identities = 727/728 (99%)
Strand = Plus / Plus
Query: 2222 atgcttcttcatttaccctaaagacaaacttgcaggctgagcaaatagaaatccattctt 2281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 atgcttcttcatttaccctaaagacaaacttgcaggctgagcaaatagaaatccattctt 63
Query: 2282 tttatggactctttcctcgtccatgttcatcaatgcaagatacatctagtggcatacagt 2341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 tttatggactctttcctcgtccatgttcatcaatgcaagatacatctagtggcatacagt 123
Query: 2342 actctgaaataacaaagaaatttttccttttaggccaagttattgctaaagcacttcaag 2401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 actctgaaataacaaagaaatttttccttttaggccaagttattgctaaagcacttcaag 183
Query: 2402 atggaagggtcttagatctccacttctctaaagcattctataagcttattcttggaaagg 2461
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 184 atggaagggtcttagatctccacttctccaaagcattctataagcttattcttggaaagg 243
Query: 2462 aactttctctatatgatattccgtcacttgatcctgggcttggtggggtgctgcaagagt 2521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 aactttctctatatgatattccgtcacttgatcctgggcttggtggggtgctgcaagagt 303
Query: 2522 tccaagcacttgttaaccggaaaaaattccttgaatccatcagtggagggaattccgagt 2581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tccaagcacttgttaaccggaaaaaattccttgaatccatcagtggagggaattccgagt 363
Query: 2582 tggaatgtggactaagctttcgagatactagaattgaggatctttgtcttgattttactc 2641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tggaatgtggactaagctttcgagatactagaattgaggatctttgtcttgattttactc 423
Query: 2642 ttcctggatatcctgatattgttcttgcctcagggtctgatcacacaatggtaaatatgg 2701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ttcctggatatcctgatattgttcttgcctcagggtctgatcacacaatggtaaatatgg 483
Query: 2702 ggaaccttgaggattatgtttcatttattattgatgcaactgtgcgctctggaatttcaa 2761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ggaaccttgaggattatgtttcatttattattgatgcaactgtgcgctctggaatttcaa 543
Query: 2762 gacaaatggaagcttttaaatctggctttaaccaggttttccctatccatcatcttcaga 2821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gacaaatggaagcttttaaatctggctttaaccaggttttccctatccatcatcttcaga 603
Query: 2822 ttttcaatgaagaagaacttgagcgtatactttgtggagagcatgattcttgggctgaga 2881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ttttcaatgaagaagaacttgagcgtatactttgtggagagcatgattcttgggctgaga 663
Query: 2882 tcaatgagcttgcagatcacatcaagttcgatcatgggtacactgctagcagtcctcccg 2941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 tcaatgagcttgcagatcacatcaagttcgatcatgggtacactgctagcagtcctcccg 723
Query: 2942 ttgttaat 2949
||||||||
Sbjct: 724 ttgttaat 731
>gnl|LJGI|TC65536 similar to UniRef100_A7PSS0 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 844
Score = 987 bits (498), Expect = 0.0
Identities = 498/498 (100%)
Strand = Plus / Plus
Query: 2734 gatgcaactgtgcgctctggaatttcaagacaaatggaagcttttaaatctggctttaac 2793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gatgcaactgtgcgctctggaatttcaagacaaatggaagcttttaaatctggctttaac 61
Query: 2794 caggttttccctatccatcatcttcagattttcaatgaagaagaacttgagcgtatactt 2853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 caggttttccctatccatcatcttcagattttcaatgaagaagaacttgagcgtatactt 121
Query: 2854 tgtggagagcatgattcttgggctgagatcaatgagcttgcagatcacatcaagttcgat 2913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tgtggagagcatgattcttgggctgagatcaatgagcttgcagatcacatcaagttcgat 181
Query: 2914 catgggtacactgctagcagtcctcccgttgttaatttgttggaaattatccgagagttt 2973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 catgggtacactgctagcagtcctcccgttgttaatttgttggaaattatccgagagttt 241
Query: 2974 gaccataaacagcgacgagcctttctgctgtttgtgactggcacacctcgacttcctcca 3033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gaccataaacagcgacgagcctttctgctgtttgtgactggcacacctcgacttcctcca 301
Query: 3034 ggaggattgtcgtctctcaatccgaagttgactattgtccgaaagcactgtagcaaccgg 3093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ggaggattgtcgtctctcaatccgaagttgactattgtccgaaagcactgtagcaaccgg 361
Query: 3094 gcagacgcagacttaccaagcgtgatgacgtgtgcaaattaccttaaactacctccgtat 3153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gcagacgcagacttaccaagcgtgatgacgtgtgcaaattaccttaaactacctccgtat 421
Query: 3154 tcaacaaaagaaaagatgaaagagaagctcttgtatgctattacggagggtcagggatct 3213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tcaacaaaagaaaagatgaaagagaagctcttgtatgctattacggagggtcagggatct 481
Query: 3214 ttccacctttcataactt 3231
||||||||||||||||||
Sbjct: 482 ttccacctttcataactt 499
>gnl|LJGI|AU251899 similar to UniRef100_A7PSS0 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 174
Score = 281 bits (142), Expect = 1e-74
Identities = 170/174 (97%), Gaps = 4/174 (2%)
Strand = Plus / Plus
Query: 1939 tttggtcagcc-acaaattcaacc-tcatatgtctt-acaacaactcaggaacaattgg- 1994
||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 1 tttggtcagcccacaaattcaaccctcatatgtctttacaacaactcaggaacaattggg 60
Query: 1995 tgacaggcgacaaagcgctggtggattgcatcgaaagaaattcttagtttatcgcaatag 2054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgacaggcgacaaagcgctggtggattgcatcgaaagaaattcttagtttatcgcaatag 120
Query: 2055 gattctggaatctgctacacaaatgatggacctacatgctagtcataaagtggt 2108
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gattctggaatctgctacacaaatgatggacctacatgctagtcataaagtggt 174
>gnl|LJGI|BP056084
Length = 522
Score = 56.0 bits (28), Expect = 1e-06
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 1565 cttttttatcagacatgttctcttatgaacttgtttctgatttggagaagtcaagt 1620
||||||| ||||| |||||||||| ||||| |||||||||| | |||||||||||
Sbjct: 263 cttttttctcagagatgttctcttgtgaacctgtttctgatctaaagaagtcaagt 208