Miyakogusa Predicted Gene

Lj5g3v0615600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0615600.1 Non Chatacterized Hit- tr|I1L8P7|I1L8P7_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,85.21,0,MEMBRANE-BOUND PREDICTED REDOX MODULATOR,NULL; MEMBRANE
BOUND PREDICTED REDOX MODULATOR,NULL; TerC,I,CUFF.53459.1
         (366 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g05470.1                                                       447   e-126
Glyma13g19820.1                                                       420   e-117

>Glyma10g05470.1 
          Length = 285

 Score =  447 bits (1151), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 225/284 (79%), Positives = 248/284 (87%), Gaps = 2/284 (0%)

Query: 85  LETSRTQTSV--ETYNSSIRTVALWVCAAVVFGIGVGFKEGYDKAAEFFAGYILEQSLSV 142
           +E S TQ S+  E Y+SS+RTVALWVC AV FG+G+GFKEG+DKA+EFFAGYILEQSLSV
Sbjct: 2   VEKSPTQESLGNEDYSSSVRTVALWVCTAVAFGVGLGFKEGFDKASEFFAGYILEQSLSV 61

Query: 143 DNLFVFVLIFKYFKVPMSYQSRVLSYGIAGAIVFRLTIILLGTATLQRFEAVNLLLAAIL 202
           DNLFVFVLIF YFKVP++YQ+RVLSYGIAGA+VFRLT+IL+GTATLQRFEAVNLLLAAIL
Sbjct: 62  DNLFVFVLIFNYFKVPVAYQNRVLSYGIAGAVVFRLTLILIGTATLQRFEAVNLLLAAIL 121

Query: 203 LYXXXXXXXXXXXXXXXXXXXXVKTCQNLIPVTTSYDGNRFITNQGGVWKATPLLLTVAV 262
           L+                    VKTCQ  IPVTT YDGNRFITN  GVWKATPLLLTVAV
Sbjct: 122 LFSSFKLFASEEDESDLSDNFVVKTCQKFIPVTTYYDGNRFITNLDGVWKATPLLLTVAV 181

Query: 263 IELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAILGLRSLYVIISEGMAELKYLQPSIAV 322
           IELSDIAFAVDSIPAVFGVTRDPF+VF+SNLFAILGLRSL++IISEGM+ELKYLQPSIA+
Sbjct: 182 IELSDIAFAVDSIPAVFGVTRDPFVVFTSNLFAILGLRSLFLIISEGMSELKYLQPSIAI 241

Query: 323 VLGFIGFKMIVDYFGFHVSTEASLGFVASSLTIGVVLSLANKSD 366
           VLGF+G KMI+DYFGFHVSTEASL FVASSLTIGVVLSLANKSD
Sbjct: 242 VLGFVGVKMILDYFGFHVSTEASLAFVASSLTIGVVLSLANKSD 285


>Glyma13g19820.1 
          Length = 276

 Score =  420 bits (1079), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 212/259 (81%), Positives = 227/259 (87%)

Query: 108 VCAAVVFGIGVGFKEGYDKAAEFFAGYILEQSLSVDNLFVFVLIFKYFKVPMSYQSRVLS 167
           VC AV FG+G+GFKEG+DKA+EFFAGYILEQSLSVDNLFVFVLIF YFKVP++YQ+RVLS
Sbjct: 18  VCTAVAFGVGLGFKEGFDKASEFFAGYILEQSLSVDNLFVFVLIFNYFKVPVTYQNRVLS 77

Query: 168 YGIAGAIVFRLTIILLGTATLQRFEAVNLLLAAILLYXXXXXXXXXXXXXXXXXXXXVKT 227
           YGIAGA+VFRLTIIL+GTATLQRFEAVNLLLAAILLY                    VKT
Sbjct: 78  YGIAGAVVFRLTIILIGTATLQRFEAVNLLLAAILLYSSSKLFASEEDESDLSDNFVVKT 137

Query: 228 CQNLIPVTTSYDGNRFITNQGGVWKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFI 287
           CQ  IPVTT YDGNRFITN  GVWKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPF+
Sbjct: 138 CQKFIPVTTYYDGNRFITNLDGVWKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFV 197

Query: 288 VFSSNLFAILGLRSLYVIISEGMAELKYLQPSIAVVLGFIGFKMIVDYFGFHVSTEASLG 347
           VF+SNLFAILGLRSL++IISEGM+ELKYLQPSIAVVLGFIG KMI+DYFG HVSTEASL 
Sbjct: 198 VFTSNLFAILGLRSLFLIISEGMSELKYLQPSIAVVLGFIGVKMILDYFGLHVSTEASLA 257

Query: 348 FVASSLTIGVVLSLANKSD 366
           FVASSLTIGVVLSL NKSD
Sbjct: 258 FVASSLTIGVVLSLVNKSD 276