Miyakogusa Predicted Gene

Lj5g3v0615600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0615600.1 Non Characterized Hit- tr|I1L8P7|I1L8P7_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,85.21,0,MEMBRANE-BOUND PREDICTED REDOX MODULATOR,NULL; MEMBRANE
BOUND PREDICTED REDOX MODULATOR,NULL; TerC,I,CUFF.53459.1
         (366 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g067200.1 | integral membrane protein, TerC family protein...   504   e-143

>Medtr1g067200.1 | integral membrane protein, TerC family protein |
           HC | chr1:28936820-28930063 | 20130731
          Length = 361

 Score =  504 bits (1298), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 266/370 (71%), Positives = 296/370 (80%), Gaps = 13/370 (3%)

Query: 1   MGLASVVHNCVQFPFNFDHRFHRVSHSPSKCSQLHFVHHPISTFCSVYHHRRPHRVPVQF 60
           M LASVVHN +Q P N      R+  S SK S L F+H PIS+F SVYH  RP R+P+  
Sbjct: 1   MSLASVVHNGIQTPLNHTDLI-RIRASHSKTSTLQFLHRPISSFSSVYHLHRPLRLPLPC 59

Query: 61  FRRIFQ----NASEVKKICAKPNDGNNDLETSRTQTSVETYNSSIRTVALWVCAAVVFGI 116
            + I Q    + S+VK+I A+ +D     E S T+   E+ +S++RTVALWVCAAV FG+
Sbjct: 60  SKPIRQVHPFHTSDVKRITAQRDD-----EISSTE---ESQSSAVRTVALWVCAAVAFGV 111

Query: 117 GVGFKEGYDKAAEFFAGYILEQSLSVDNLFVFVLIFKYFKVPMSYQSRVLSYGIAGAIVF 176
           GVGF EGY+KA+EFFAGYILEQSLSVDNLFVFVLIFKYFKVP+ YQ+RVLSYGIAGA+VF
Sbjct: 112 GVGFTEGYEKASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPVLYQNRVLSYGIAGAVVF 171

Query: 177 RLTIILLGTATLQRFEAVNLLLAAILLYXXXXXXXXXXXXXXXXXXXXVKTCQNLIPVTT 236
           RL IILLGTAT+QRFEAVNLLLAAILL+                    VKTCQ LIPVTT
Sbjct: 172 RLIIILLGTATIQRFEAVNLLLAAILLFSSFKLFASEEEESDLSDNFLVKTCQKLIPVTT 231

Query: 237 SYDGNRFITNQGGVWKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAI 296
            YDGN+FITNQ G+W ATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAI
Sbjct: 232 YYDGNKFITNQDGIWMATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFIVFSSNLFAI 291

Query: 297 LGLRSLYVIISEGMAELKYLQPSIAVVLGFIGFKMIVDYFGFHVSTEASLGFVASSLTIG 356
           LGLRSLYVIISEGM+ELKYLQPSIAVVLGFIG KMI DYFGFHVSTEASLGFVASSL+IG
Sbjct: 292 LGLRSLYVIISEGMSELKYLQPSIAVVLGFIGCKMISDYFGFHVSTEASLGFVASSLSIG 351

Query: 357 VVLSLANKSD 366
           V+LSLANKSD
Sbjct: 352 VILSLANKSD 361