Miyakogusa Predicted Gene
- Lj5g3v0539930.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0539930.1 tr|F4J8R6|F4J8R6_ARATH Carbon catabolite
repressor protein 4-like 3 OS=Arabidopsis thaliana
GN=At3g1,48.65,3e-18,seg,NULL; CARBON CATABOLITE REPRESSOR PROTEIN
4-RELATED,NULL; CARBON CATABOLITE REPRESSOR PROTEIN 4,,CUFF.53282.1
(818 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G11350.1 | Symbols: | DNAse I-like superfamily protein | chr... 383 e-106
AT3G18500.3 | Symbols: | DNAse I-like superfamily protein | chr... 218 1e-56
AT3G18500.2 | Symbols: | DNAse I-like superfamily protein | chr... 217 2e-56
AT1G73875.1 | Symbols: | DNAse I-like superfamily protein | chr... 208 1e-53
AT3G18500.1 | Symbols: | DNAse I-like superfamily protein | chr... 187 2e-47
AT3G58580.1 | Symbols: | DNAse I-like superfamily protein | chr... 117 2e-26
AT3G58560.1 | Symbols: | DNAse I-like superfamily protein | chr... 113 6e-25
AT1G31500.2 | Symbols: | DNAse I-like superfamily protein | chr... 87 6e-17
AT1G31500.1 | Symbols: | DNAse I-like superfamily protein | chr... 87 7e-17
AT1G31500.4 | Symbols: | DNAse I-like superfamily protein | chr... 85 2e-16
AT1G31500.3 | Symbols: | DNAse I-like superfamily protein | chr... 81 3e-15
AT1G02270.1 | Symbols: | Calcium-binding endonuclease/exonuclea... 53 9e-07
AT5G54130.2 | Symbols: | Calcium-binding endonuclease/exonuclea... 51 3e-06
AT5G54130.4 | Symbols: | Calcium-binding endonuclease/exonuclea... 51 4e-06
>AT5G11350.1 | Symbols: | DNAse I-like superfamily protein |
chr5:3621583-3625412 FORWARD LENGTH=754
Length = 754
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 181/258 (70%), Positives = 210/258 (81%), Gaps = 8/258 (3%)
Query: 98 RQAFRPKPPDYREWELALTPPPPPHCERFIVLSYNILADYLAMEHGR-LYSHIPRYMLDW 156
RQ R KP DYREWE A TPP P E+F+VLSYNILADYLA +H R LY HIPR ML W
Sbjct: 156 RQRPRSKPSDYREWEYAKTPPSP-GSEKFVVLSYNILADYLANDHWRSLYFHIPRNMLSW 214
Query: 157 QWRKNNIVFELGLWSADIMCLQEVDRFHELAEDFKAKGYSGIWKMRTGNPVDGCAIFWRT 216
WRK+ +VFEL LWSADIMCLQEVD+F +L E+ K +GYS IWKMRTGN VDGCAIFWR+
Sbjct: 215 GWRKSKLVFELSLWSADIMCLQEVDKFQDLEEEMKHRGYSAIWKMRTGNAVDGCAIFWRS 274
Query: 217 SRFNLLYEECIEFNKLGLRDNVAQICVLELI-----NQNGSLPP-SLKGSSKVVVCNIHV 270
+RF L++EE I+FN+LGLRDNVAQICVLE + +N + PP S GS +VV+CNIHV
Sbjct: 275 NRFKLVHEESIQFNQLGLRDNVAQICVLETLLTSHTKENETPPPESSAGSHRVVICNIHV 334
Query: 271 LYNPNRGEIKLGQVRVLLDKAKAVSELWNNAPIVICGDFNCTPKSPLYNFISEQKLDLSG 330
L+NP RG+ KLGQVR LLDKA AVS+LW++APIV+CGDFNCTPKSPLYNFIS++KLDLSG
Sbjct: 335 LFNPKRGDFKLGQVRTLLDKAHAVSKLWDDAPIVLCGDFNCTPKSPLYNFISDRKLDLSG 394
Query: 331 IDRDKVSGQASATIRPPR 348
+ RDKVSGQ SA RPPR
Sbjct: 395 LARDKVSGQVSAEFRPPR 412
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/129 (66%), Positives = 102/129 (79%), Gaps = 4/129 (3%)
Query: 682 LSPVPI---SKSIDPGKTTHNPSLWTPMEIKTAAGNAECTVLEHPLLLRSTYTEATMNCS 738
+S VP+ S++++ K T++PS WTPMEI TA G+ E T +EH L L+STY+E +
Sbjct: 618 VSEVPLKWSSEALNSDKITYSPSSWTPMEIATATGDPERTTVEHALELKSTYSEVEGQ-A 676
Query: 739 GTRDPHGEPLVTSYHRCFSGTVDYIWRSEGLQTTRVLAPIPKHVMEWTPGFPTKKWGSDH 798
TRD +GEP+VTSYHRCF GTVDYIWRSEGLQT RVLAPIPK M+WTPGFPT KWGSDH
Sbjct: 677 NTRDENGEPVVTSYHRCFMGTVDYIWRSEGLQTVRVLAPIPKQAMQWTPGFPTPKWGSDH 736
Query: 799 IALVSELAF 807
IALVSELAF
Sbjct: 737 IALVSELAF 745
>AT3G18500.3 | Symbols: | DNAse I-like superfamily protein |
chr3:6352544-6355297 FORWARD LENGTH=449
Length = 449
Score = 218 bits (556), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/273 (43%), Positives = 167/273 (61%), Gaps = 8/273 (2%)
Query: 109 REWELALTPPPPPHCERFIVLSYNILADYLAMEHGRLYSHIPRYMLDWQWRKNNIVFELG 168
R+W + T P ERF V+SYNIL D + H LYS++ L W +RK I EL
Sbjct: 92 RDWIDSDTTPVSQALERFTVVSYNILGDGNSSYHRELYSNVSVPYLKWGYRKRLICEELI 151
Query: 169 LWSADIMCLQEVDRFHELAEDFKAKGYSGIWKMRTGNPVDGCAIFWRTSRFNLLYEECIE 228
+ DI+ +QEVD++ +L + GY+G +K RTG+ VDGCA+FW+ RF +L E IE
Sbjct: 152 RLNPDIISMQEVDKYFDLFSMMEKAGYAGSYKRRTGDNVDGCAMFWKADRFGVLERENIE 211
Query: 229 FNKLGLRDNVAQICVLELINQNGSLPPSLKGSSKVVVCNIHVLYNPNRGEIKLGQVRVLL 288
F++ G+RDNVAQ+ VLEL N S K+++ NIHVLYNPN+G++KLGQVR L
Sbjct: 212 FSQFGMRDNVAQLAVLELRKSN--------KSRKILLGNIHVLYNPNQGDVKLGQVRSLC 263
Query: 289 DKAKAVSELWNNAPIVICGDFNCTPKSPLYNFISEQKLDLSGIDRDKVSGQASATIRPPR 348
KA +S+ W + PIV+CGDFN TPKSPLYNF++ +L++ D+ ++SGQ +
Sbjct: 264 SKAHLLSKKWGDIPIVLCGDFNSTPKSPLYNFLASSELNVMEHDKKELSGQKNCRPTKVL 323
Query: 349 RVGTNNSERPADGSVQVPSTEGDKEVKIGQDSS 381
G+ +S S T+ + V GQ++S
Sbjct: 324 ETGSKSSNTITFRSFCSSWTKEEIRVATGQENS 356
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 701 SLWTPMEIKTAAGNAECTVLEHPLLLRSTYTEATMNCSGTRDPHGEPLVTSYHRCFSGTV 760
S WT EI+ A G HPL L S+Y + + TRD GEPL TSYH F GTV
Sbjct: 340 SSWTKEEIRVATGQENSYWAAHPLKLNSSYA-SVKGSANTRDSVGEPLATSYHSKFLGTV 398
Query: 761 DYIWRSEGLQTTRVLAPIPKHVMEWTPGFPTKKWGSDHIALVSELAFLKEG 811
DY+W S+GL RVL +P V+ T G P ++ GSDH+ALVSE F +G
Sbjct: 399 DYLWYSDGLLPARVLDTLPIDVLCKTKGLPCQELGSDHLALVSEFVFEPDG 449
>AT3G18500.2 | Symbols: | DNAse I-like superfamily protein |
chr3:6352544-6355297 FORWARD LENGTH=448
Length = 448
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/275 (42%), Positives = 171/275 (62%), Gaps = 13/275 (4%)
Query: 109 REWELALTPPPPPHCERFIVLSYNILADYLAMEHGRLYSHIPRYMLDWQWRKNNIVFELG 168
R+W + T P ERF V+SYNIL D + H LYS++ L W +RK I EL
Sbjct: 92 RDWIDSDTTPVSQALERFTVVSYNILGDGNSSYHRELYSNVSVPYLKWGYRKRLICEELI 151
Query: 169 LWSADIMCLQEVDRFHELAEDFKAKGYSGIWKMRTGNPVDGCAIFWRTSRFNLLYEECIE 228
+ DI+ +QEVD++ +L + GY+G +K RTG+ VDGCA+FW+ RF +L E IE
Sbjct: 152 RLNPDIISMQEVDKYFDLFSMMEKAGYAGSYKRRTGDNVDGCAMFWKADRFGVLERENIE 211
Query: 229 FNKLGLRDNVAQICVLELINQNGSLPPSLKGSSKVVVCNIHVLYNPNRGEIKLGQVRVLL 288
F++ G+RDNVAQ+ VLEL N S K+++ NIHVLYNPN+G++KLGQVR L
Sbjct: 212 FSQFGMRDNVAQLAVLELRKSN--------KSRKILLGNIHVLYNPNQGDVKLGQVRSLC 263
Query: 289 DKAKAVSELWNNAPIVICGDFNCTPKSPLYNFISEQKLDLSGIDRDKVSGQASATIRPPR 348
KA +S+ W + PIV+CGDFN TPKSPLYNF++ +L++ D+ ++SGQ + P
Sbjct: 264 SKAHLLSKKWGDIPIVLCGDFNSTPKSPLYNFLASSELNVMEHDKKELSGQKNCR---PT 320
Query: 349 RVGTNNSERPADGSVQVPSTEGDKEVKI--GQDSS 381
+V S+ + S+ +E+++ GQ++S
Sbjct: 321 KVLETGSKSSNTITFSFCSSWTKEEIRVATGQENS 355
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 701 SLWTPMEIKTAAGNAECTVLEHPLLLRSTYTEATMNCSGTRDPHGEPLVTSYHRCFSGTV 760
S WT EI+ A G HPL L S+Y + + TRD GEPL TSYH F GTV
Sbjct: 339 SSWTKEEIRVATGQENSYWAAHPLKLNSSYA-SVKGSANTRDSVGEPLATSYHSKFLGTV 397
Query: 761 DYIWRSEGLQTTRVLAPIPKHVMEWTPGFPTKKWGSDHIALVSELAFLKEG 811
DY+W S+GL RVL +P V+ T G P ++ GSDH+ALVSE F +G
Sbjct: 398 DYLWYSDGLLPARVLDTLPIDVLCKTKGLPCQELGSDHLALVSEFVFEPDG 448
>AT1G73875.1 | Symbols: | DNAse I-like superfamily protein |
chr1:27781112-27784571 FORWARD LENGTH=454
Length = 454
Score = 208 bits (530), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/245 (44%), Positives = 153/245 (62%), Gaps = 7/245 (2%)
Query: 123 CERFIVLSYNILADYLAMEHGRLYSHIPRYMLDWQWRKNNIVFELGLWSADIMCLQEVDR 182
++ +++SYN+L A H LY ++PR L+W RK+ I E+ ++A I+CLQEVDR
Sbjct: 97 ADKLVLVSYNLLGVDNASNHMDLYYNVPRKHLEWSRRKHLICKEISRYNASILCLQEVDR 156
Query: 183 FHELAEDFKAKGYSGIWKMRTGNPVDGCAIFWRTSRFNLLYEECIEFNKLGLRDNVAQIC 242
F +L K +G+ G+ K RTG DGCAIFW+ + F LL + IEF+K G+R+NVAQ+C
Sbjct: 157 FDDLDVLLKNRGFRGVHKSRTGEASDGCAIFWKENLFELLDHQHIEFDKFGMRNNVAQLC 216
Query: 243 VLELINQNGSLPPSLKGSS----KVVVCNIHVLYNPNRGEIKLGQVRVLLDKAKAVSELW 298
VLE+ N L+ S ++VV NIHVL+NP RG+IKLGQVR+ L+KA +S+ W
Sbjct: 217 VLEM-NCEEDPKSKLRVRSSDPRRLVVGNIHVLFNPKRGDIKLGQVRLFLEKAYKLSQEW 275
Query: 299 NNAPIVICGDFNCTPKSPLYNFISEQKLDLSGIDRDKVSGQASATIRPPRRVGTNNSERP 358
N P+ I GD N TP+S +Y+FI+ LD DR ++SGQ + P R N+
Sbjct: 276 GNIPVAIAGDLNSTPQSAIYDFIASADLDTQLHDRRQISGQTE--VEPKERSFRNHYAFS 333
Query: 359 ADGSV 363
A S+
Sbjct: 334 ASASI 338
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Query: 703 WTPMEIKTAAGNAECTVLEHPLLLRSTYTEATMNCSGTRDPHGEPLVTSYHRCFSGTVDY 762
W+ E++ A G E T ++H L L S Y+ TRD GEPL T+YH F GTVDY
Sbjct: 346 WSQEELQLATGGQETTHVQHQLKLNSAYS-GVPGTYRTRDQRGEPLATTYHSRFLGTVDY 404
Query: 763 IWRSEGLQTTRVLAPIPKHVMEWTPGFPTKKWGSDHIALVSELAFLKE 810
IW ++ L RVL +P V+ T G P++ WGSDH+A+ EL F+ +
Sbjct: 405 IWHTKELVPVRVLETLPADVLRRTGGLPSENWGSDHLAIACELGFVND 452
>AT3G18500.1 | Symbols: | DNAse I-like superfamily protein |
chr3:6352544-6355297 FORWARD LENGTH=426
Length = 426
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/275 (40%), Positives = 157/275 (57%), Gaps = 35/275 (12%)
Query: 109 REWELALTPPPPPHCERFIVLSYNILADYLAMEHGRLYSHIPRYMLDWQWRKNNIVFELG 168
R+W + T P ERF V+SYNIL D + H LYS++ L W +RK I EL
Sbjct: 92 RDWIDSDTTPVSQALERFTVVSYNILGDGNSSYHRELYSNVSVPYLKWGYRKRLICEELI 151
Query: 169 LWSADIMCLQEVDRFHELAEDFKAKGYSGIWKMRTGNPVDGCAIFWRTSRFNLLYEECIE 228
+ DI+ +Q RTG+ VDGCA+FW+ RF +L E IE
Sbjct: 152 RLNPDIISMQR----------------------RTGDNVDGCAMFWKADRFGVLERENIE 189
Query: 229 FNKLGLRDNVAQICVLELINQNGSLPPSLKGSSKVVVCNIHVLYNPNRGEIKLGQVRVLL 288
F++ G+RDNVAQ+ VLEL N S K+++ NIHVLYNPN+G++KLGQVR L
Sbjct: 190 FSQFGMRDNVAQLAVLELRKSNKS--------RKILLGNIHVLYNPNQGDVKLGQVRSLC 241
Query: 289 DKAKAVSELWNNAPIVICGDFNCTPKSPLYNFISEQKLDLSGIDRDKVSGQASATIRPPR 348
KA +S+ W + PIV+CGDFN TPKSPLYNF++ +L++ D+ ++SGQ + P
Sbjct: 242 SKAHLLSKKWGDIPIVLCGDFNSTPKSPLYNFLASSELNVMEHDKKELSGQKNCR---PT 298
Query: 349 RVGTNNSERPADGSVQVPSTEGDKEVKI--GQDSS 381
+V S+ + S+ +E+++ GQ++S
Sbjct: 299 KVLETGSKSSNTITFSFCSSWTKEEIRVATGQENS 333
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 701 SLWTPMEIKTAAGNAECTVLEHPLLLRSTYTEATMNCSGTRDPHGEPLVTSYHRCFSGTV 760
S WT EI+ A G HPL L S+Y + + TRD GEPL TSYH F GTV
Sbjct: 317 SSWTKEEIRVATGQENSYWAAHPLKLNSSYA-SVKGSANTRDSVGEPLATSYHSKFLGTV 375
Query: 761 DYIWRSEGLQTTRVLAPIPKHVMEWTPGFPTKKWGSDHIALVSELAFLKEG 811
DY+W S+GL RVL +P V+ T G P ++ GSDH+ALVSE F +G
Sbjct: 376 DYLWYSDGLLPARVLDTLPIDVLCKTKGLPCQELGSDHLALVSEFVFEPDG 426
>AT3G58580.1 | Symbols: | DNAse I-like superfamily protein |
chr3:21660866-21663697 REVERSE LENGTH=603
Length = 603
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 118/232 (50%), Gaps = 34/232 (14%)
Query: 126 FIVLSYNILADYLAMEHGRLYSHIPRYMLDWQWRKNNIVFELGLWSADIMCLQEV--DRF 183
F VLSYNIL+D A LYS+ P + L W +R+ N++ E+ + AD++CLQEV D F
Sbjct: 251 FTVLSYNILSDTSASSD--LYSYCPPWALSWPYRRQNLLREIVGYRADVVCLQEVQSDHF 308
Query: 184 HEL-AEDFKAKGYSGIWKMRTG-------NPVDGCAIFWRTSRFNLLYEECIEFNKLG-- 233
HE+ A + GY ++K +T + +DGCA F+R RF+ + + +EFNK
Sbjct: 309 HEIFAPELDKHGYQALYKRKTNEVLSGSTSAIDGCATFFRRDRFSHVKKYDVEFNKAAQS 368
Query: 234 ------------------LRDNVAQICVLELINQNGSLPPSLKGSSKVVVCNIHVLYNPN 275
++DN+A I VLE N PS K + V N HV +
Sbjct: 369 LTDALIPQAQKRTALNRLVKDNIALIVVLEAKFGNQPTDPSGK-RQLICVANTHVNVQQD 427
Query: 276 RGEIKLGQVRVLLDKAKAVSELWNNAPIVICGDFNCTPKSPLYNFISEQKLD 327
++KL QV LL + ++ + P+++CGDFN P S + + K+D
Sbjct: 428 LKDVKLWQVHTLLKGLEKIAA-SADIPMLVCGDFNTLPGSAPHTLLVMGKVD 478
>AT3G58560.1 | Symbols: | DNAse I-like superfamily protein |
chr3:21650880-21653896 REVERSE LENGTH=602
Length = 602
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 118/233 (50%), Gaps = 36/233 (15%)
Query: 126 FIVLSYNILADYLAMEHGRLYSHIPRYMLDWQWRKNNIVFELGLWSADIMCLQEV--DRF 183
F VLSYNIL+D A +YS+ P + L W +R+ N++ E+ + ADI+CLQEV D F
Sbjct: 248 FTVLSYNILSDTYA--SSDIYSYCPTWALAWTYRRQNLLREIVKYRADIVCLQEVQNDHF 305
Query: 184 HE-LAEDFKAKGYSGIWKMRTG-------NPVDGCAIFWRTSRFNLLYEECIEFNKLG-- 233
E + GY G++K +T N +DGCA F+R RF+ + + +EFNK
Sbjct: 306 EEFFLPELDKHGYQGLFKRKTNEVFIGNTNTIDGCATFFRRDRFSHVKKYEVEFNKAAQS 365
Query: 234 ------------------LRDNVAQICVLELINQNGSLPPSLKGSSKVV-VCNIHVLYNP 274
++DNVA I VLE + GS G +++ V N HV
Sbjct: 366 LTEAIIPVSQKKNALNRLVKDNVALIVVLE--AKFGSQAADNPGKRQLLCVANTHVNVPH 423
Query: 275 NRGEIKLGQVRVLLDKAKAVSELWNNAPIVICGDFNCTPKSPLYNFISEQKLD 327
++KL QV LL + ++ + P+++CGDFN P S + ++ K+D
Sbjct: 424 ELKDVKLWQVHTLLKGLEKIAA-SADIPMLVCGDFNTVPASAPHTLLAVGKVD 475
>AT1G31500.2 | Symbols: | DNAse I-like superfamily protein |
chr1:11273821-11276147 REVERSE LENGTH=358
Length = 358
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 106/235 (45%), Gaps = 42/235 (17%)
Query: 125 RFIVLSYNILADYLAMEHGRLYSHIPRYMLDWQWRKNNIVFELGLWSADIMCLQEVDRFH 184
RF ++SYNILA L H P L W+ R + I+ L AD CLQEVD +
Sbjct: 32 RFRLVSYNILAQVYV--KSALLPHSPPACLKWKARSHAILSVLKNLQADFFCLQEVDEYD 89
Query: 185 ELAE-DFKAKGYSGIWKMRTGN-PVDGCAIFWRTSRFNLLYEECIEFNKLG---LRDNVA 239
+ + GYSGI+ RTG DGCAIF++ S L+ +E IE+N L D+V+
Sbjct: 90 SFYRNNMDSLGYSGIYIQRTGQRKRDGCAIFYKPSCAELVTKERIEYNDLVDSIKADSVS 149
Query: 240 QICVLELINQNGSLPPSLKGSSK----------------------------VVVCNIHVL 271
C + I + S K S V+V N H+
Sbjct: 150 --CSEQKIETSNEGKDSRKDSRDLNDPLVRLKRDCVGIMAAFRINKPFQHIVIVANTHLY 207
Query: 272 YNPNRGEIKLGQVRVLLDKAKA----VSELWNNAP-IVICGDFNCTPKSPLYNFI 321
++P ++KL Q + LL + +S+ + P +++ GDFN P +Y+++
Sbjct: 208 WDPELADVKLAQAKYLLSRLAQFKTLISDEFECTPSLLLAGDFNSIPGDMVYSYL 262
>AT1G31500.1 | Symbols: | DNAse I-like superfamily protein |
chr1:11273821-11276534 REVERSE LENGTH=388
Length = 388
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 106/235 (45%), Gaps = 42/235 (17%)
Query: 125 RFIVLSYNILADYLAMEHGRLYSHIPRYMLDWQWRKNNIVFELGLWSADIMCLQEVDRFH 184
RF ++SYNILA L H P L W+ R + I+ L AD CLQEVD +
Sbjct: 62 RFRLVSYNILAQVYV--KSALLPHSPPACLKWKARSHAILSVLKNLQADFFCLQEVDEYD 119
Query: 185 ELAE-DFKAKGYSGIWKMRTGN-PVDGCAIFWRTSRFNLLYEECIEFNKLG---LRDNVA 239
+ + GYSGI+ RTG DGCAIF++ S L+ +E IE+N L D+V+
Sbjct: 120 SFYRNNMDSLGYSGIYIQRTGQRKRDGCAIFYKPSCAELVTKERIEYNDLVDSIKADSVS 179
Query: 240 QICVLELINQNGSLPPSLKGSSK----------------------------VVVCNIHVL 271
C + I + S K S V+V N H+
Sbjct: 180 --CSEQKIETSNEGKDSRKDSRDLNDPLVRLKRDCVGIMAAFRINKPFQHIVIVANTHLY 237
Query: 272 YNPNRGEIKLGQVRVLLDKAKA----VSELWNNAP-IVICGDFNCTPKSPLYNFI 321
++P ++KL Q + LL + +S+ + P +++ GDFN P +Y+++
Sbjct: 238 WDPELADVKLAQAKYLLSRLAQFKTLISDEFECTPSLLLAGDFNSIPGDMVYSYL 292
>AT1G31500.4 | Symbols: | DNAse I-like superfamily protein |
chr1:11273821-11276534 REVERSE LENGTH=417
Length = 417
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 104/235 (44%), Gaps = 42/235 (17%)
Query: 125 RFIVLSYNILADYLAMEHGRLYSHIPRYMLDWQWRKNNIVFELGLWSADIMCLQEVDRFH 184
RF ++SYNILA L H P L W+ R + I+ L AD CLQEVD +
Sbjct: 91 RFRLVSYNILAQVYV--KSALLPHSPPACLKWKARSHAILSVLKNLQADFFCLQEVDEYD 148
Query: 185 ELAE-DFKAKGYSGIWKMRTGN-PVDGCAIFWRTSRFNLLYEECIEFNKLG---LRDNVA 239
+ + GYSGI+ RTG DGCAIF++ S L+ +E IE+N L D+V+
Sbjct: 149 SFYRNNMDSLGYSGIYIQRTGQRKRDGCAIFYKPSCAELVTKERIEYNDLVDSIKADSVS 208
Query: 240 QICVLELINQNGSLPPSLKGSSK----------------------------VVVCNIHVL 271
C + I + S K S V+V N H+
Sbjct: 209 --CSEQKIETSNEGKDSRKDSRDLNDPLVRLKRDCVGIMAAFRINKPFQHIVIVANTHLY 266
Query: 272 YNPNRGEIKLGQVRVLLDKAKAVSELWNN-----APIVICGDFNCTPKSPLYNFI 321
++P ++KL Q + LL + L ++ +++ GDFN P +Y+++
Sbjct: 267 WDPELADVKLAQAKYLLSRLAQFKTLISDEFECTPSLLLAGDFNSIPGDMVYSYL 321
>AT1G31500.3 | Symbols: | DNAse I-like superfamily protein |
chr1:11274230-11276534 REVERSE LENGTH=283
Length = 283
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 99/227 (43%), Gaps = 42/227 (18%)
Query: 125 RFIVLSYNILADYLAMEHGRLYSHIPRYMLDWQWRKNNIVFELGLWSADIMCLQEVDRFH 184
RF ++SYNILA L H P L W+ R + I+ L AD CLQEVD +
Sbjct: 57 RFRLVSYNILAQVYV--KSALLPHSPPACLKWKARSHAILSVLKNLQADFFCLQEVDEYD 114
Query: 185 ELAE-DFKAKGYSGIWKMRTGN-PVDGCAIFWRTSRFNLLYEECIEFNKLG---LRDNVA 239
+ + GYSGI+ RTG DGCAIF++ S L+ +E IE+N L D+V+
Sbjct: 115 SFYRNNMDSLGYSGIYIQRTGQRKRDGCAIFYKPSCAELVTKERIEYNDLVDSIKADSVS 174
Query: 240 QICVLELINQNGSLPPSLKGSSK----------------------------VVVCNIHVL 271
C + I + S K S V+V N H+
Sbjct: 175 --CSEQKIETSNEGKDSRKDSRDLNDPLVRLKRDCVGIMAAFRINKPFQHIVIVANTHLY 232
Query: 272 YNPNRGEIKLGQVRVLLDKAKAVSELWNNA-----PIVICGDFNCTP 313
++P ++KL Q + LL + L ++ +++ GDFN P
Sbjct: 233 WDPELADVKLAQAKYLLSRLAQFKTLISDEFECTPSLLLAGDFNSIP 279
>AT1G02270.1 | Symbols: | Calcium-binding
endonuclease/exonuclease/phosphatase family |
chr1:443301-446197 REVERSE LENGTH=484
Length = 484
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 20/182 (10%)
Query: 156 WQWRKNNIVFELGLWSADIMCLQEV-----DRFHELAEDFKAKGYSGIWKMRTGNPVDGC 210
W R I+ L + ++CLQEV + + + GY+ RT + DG
Sbjct: 102 WLARNQRILDLLLHQRSSVICLQEVWVGNEELVNMYHHQLSSSGYTIYQLARTNSRGDGL 161
Query: 211 AIFWRTSRFNLLYEECIEFNKLGLRDNVAQICVLELINQNGSLPPSLKG----SSKVVVC 266
F ++ + FN G D VAQ L++ +P L G +V++
Sbjct: 162 LTAIHKDHFKVVNYRELLFNDFG--DRVAQ-----LLHVKTVIPFPLNGKQDVQQEVIIV 214
Query: 267 NIHVLY--NPNRGEIKLGQVRVLLDKAKAVSE--LWNNAPIVICGDFNCTPKSPLYNFIS 322
N H+L+ + + ++L QV +L+ +A + N+ PI++CGD+N + + +Y F+
Sbjct: 215 NTHLLFPHDSSLSIVRLHQVYKILEYLEAYQKENKLNHMPIILCGDWNGSKRGHVYKFLR 274
Query: 323 EQ 324
Q
Sbjct: 275 SQ 276
>AT5G54130.2 | Symbols: | Calcium-binding
endonuclease/exonuclease/phosphatase family |
chr5:21962900-21965279 FORWARD LENGTH=436
Length = 436
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 19/180 (10%)
Query: 156 WQWRKNNIVFELGLWSADIMCLQEVDRFHELAEDFKAK-----GYSGIWKMRTGNPVDGC 210
W R + I+ L + I+CLQE +E + K GY RT N DG
Sbjct: 57 WLGRNHRIIDWLLYERSSIICLQEFWVGNEELVNLYEKRLGDAGYLSYKLGRTNNRGDGL 116
Query: 211 AIFWRTSRFNLLYEECIEFNKLGLRDNVAQICVLELINQNGSLPP--SLKGSSKVVVCNI 268
F ++ + FN G D VAQ+ +EL+ PP +V++ N
Sbjct: 117 LTAVHKDYFRVVNSRDLLFNDCG--DRVAQLLHVELV------PPYSQYDAHQEVLIVNT 168
Query: 269 HVLY--NPNRGEIKLGQVRVLLDKAKAVSELWNNAP--IVICGDFNCTPKSPLYNFISEQ 324
H+L+ + ++L QV +L ++ + N +P I++CGD+N + + +Y F+ Q
Sbjct: 169 HLLFPHDSTLSIVRLQQVYKILQYVESYQKEVNLSPMPIILCGDWNGSKRGHVYKFLRSQ 228
>AT5G54130.4 | Symbols: | Calcium-binding
endonuclease/exonuclease/phosphatase family |
chr5:21962900-21964841 FORWARD LENGTH=351
Length = 351
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 19/180 (10%)
Query: 156 WQWRKNNIVFELGLWSADIMCLQEVDRFHELAEDFKAK-----GYSGIWKMRTGNPVDGC 210
W R + I+ L + I+CLQE +E + K GY RT N DG
Sbjct: 57 WLGRNHRIIDWLLYERSSIICLQEFWVGNEELVNLYEKRLGDAGYLSYKLGRTNNRGDGL 116
Query: 211 AIFWRTSRFNLLYEECIEFNKLGLRDNVAQICVLELINQNGSLPP--SLKGSSKVVVCNI 268
F ++ + FN G D VAQ+ +EL+ PP +V++ N
Sbjct: 117 LTAVHKDYFRVVNSRDLLFNDCG--DRVAQLLHVELV------PPYSQYDAHQEVLIVNT 168
Query: 269 HVLY--NPNRGEIKLGQVRVLLDKAKAVSELWNNAP--IVICGDFNCTPKSPLYNFISEQ 324
H+L+ + ++L QV +L ++ + N +P I++CGD+N + + +Y F+ Q
Sbjct: 169 HLLFPHDSTLSIVRLQQVYKILQYVESYQKEVNLSPMPIILCGDWNGSKRGHVYKFLRSQ 228