Miyakogusa Predicted Gene
- Lj5g3v0539930.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0539930.1 tr|F4J8R6|F4J8R6_ARATH Carbon catabolite
repressor protein 4-like 3 OS=Arabidopsis thaliana
GN=At3g1,48.65,3e-18,seg,NULL; CARBON CATABOLITE REPRESSOR PROTEIN
4-RELATED,NULL; CARBON CATABOLITE REPRESSOR PROTEIN 4,,CUFF.53282.1
(2457 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC598881 similar to UniRef100_Q8VYU4 Cluster: At5g11350... 1122 0.0
gnl|LJGI|FS330612 similar to UniRef100_Q8VYU4 Cluster: At5g11350... 954 0.0
gnl|LJGI|TC71101 similar to UniRef100_Q8VYU4 Cluster: At5g11350/... 392 e-108
gnl|LJGI|TC80964 76 1e-12
>gnl|LJGI|DC598881 similar to UniRef100_Q8VYU4 Cluster: At5g11350/F2I11_240; n=1;
Arabidopsis thaliana|Rep: At5g11350/F2I11_240 -
Arabidopsis, partial (1%)
Length = 577
Score = 1122 bits (566), Expect = 0.0
Identities = 576/578 (99%), Gaps = 1/578 (0%)
Strand = Plus / Plus
Query: 1712 gtgaggtcgttgccgatgaccaaatggatagttcatcgatctcatgtctagtttacaaat 1771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgaggtcgttgccgatgaccaaatggatagttcatcgatctcatgtctagtttacaaat 60
Query: 1772 cacatcaatcaaccaacattgactttccactagatgaaaaactaggggaaacattccttg 1831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cacatcaatcaaccaacattgactttccactagatgaaaaactaggggaaacattccttg 120
Query: 1832 atgagatagataaaaccatcataggcagtgaaaatgttagtgaagatgacaatgttctaa 1891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgagatagataaaaccatcataggcagtgaaaatgttagtgaagatgacaatgttctaa 180
Query: 1892 aaactgaatttcataatgccaaagaaggtgttgctctcgatcttggcccatcagtgaaat 1951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaactgaatttcataatgccaaagaaggtgttgctctcgatcttggcccatcagtgaaat 240
Query: 1952 cagattttgtaaagtcctatcaggttgaggaattagattctgcttccgaagacttattgc 2011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagattttgtaaagtcctatcaggttgaggaattagattctgcttccgaagacttattgc 300
Query: 2012 tgcctgcagaaagcaatgaagtggaggatgaattgtctccagttccaatttccaaatcta 2071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgcctgcagaaagcaatgaagtggaggatgaattgtctccagttccaatttccaaatcta 360
Query: 2072 tagatccagggaaaactactcataatccttccttatggacccctatggagataaaaactg 2131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tagatccagggaaaactactcataatccttccttatggacccctatggagataaaaactg 420
Query: 2132 cagcaggaaatgcagagtgcaccgtcttggagcaccctttactgcttaggagcacataca 2191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cagcaggaaatgcagagtgcaccgtcttggagcaccctttactgcttaggagcacataca 480
Query: 2192 ctgaagctactatgaattgttcaggaactagagacccccatggagagcctctggtaacca 2251
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 481 ctgaagctactatgaattgttcaggaactagagacccccatggagagcctctggt-acca 539
Query: 2252 gttatcataggtgcttctcaggcactgttgactacata 2289
|||||||||||||||||||| |||||||||||||||||
Sbjct: 540 gttatcataggtgcttctcaagcactgttgactacata 577
>gnl|LJGI|FS330612 similar to UniRef100_Q8VYU4 Cluster: At5g11350/F2I11_240; n=1;
Arabidopsis thaliana|Rep: At5g11350/F2I11_240 -
Arabidopsis thaliana (Mouse-ear cress), partial (15%)
Length = 629
Score = 954 bits (481), Expect = 0.0
Identities = 481/481 (100%)
Strand = Plus / Plus
Query: 93 tggacgcggcagaggattctccggccgcccctactccgccgccagagaccagttcgttac 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tggacgcggcagaggattctccggccgcccctactccgccgccagagaccagttcgttac 208
Query: 153 cggcgactctcacttccggtccgtacgcgacgccaattccggaatccgccgtggaggctt 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 cggcgactctcacttccggtccgtacgcgacgccaattccggaatccgccgtggaggctt 268
Query: 213 cgcgaatcaaacgcagtataatcagaatccgccgcggccttatcctcctcctccgacgca 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 cgcgaatcaaacgcagtataatcagaatccgccgcggccttatcctcctcctccgacgca 328
Query: 273 gttccggccgccgaatcaccggcaagcgtttcgtccgaagcctccggattatcgagagtg 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gttccggccgccgaatcaccggcaagcgtttcgtccgaagcctccggattatcgagagtg 388
Query: 333 ggagctcgctcttacgccgccacctcctccgcattgtgaacggtttatagtcctttcgta 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ggagctcgctcttacgccgccacctcctccgcattgtgaacggtttatagtcctttcgta 448
Query: 393 taatatattggctgactacctggctatggagcatgggagactttattcacacatacctcg 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 taatatattggctgactacctggctatggagcatgggagactttattcacacatacctcg 508
Query: 453 ttacatgttggactggcagtggagaaagaataatatagtttttgagcttgggttgtggtc 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ttacatgttggactggcagtggagaaagaataatatagtttttgagcttgggttgtggtc 568
Query: 513 tgctgatatcatgtgtttacaggaggttgatagatttcatgagttggcagaggattttaa 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tgctgatatcatgtgtttacaggaggttgatagatttcatgagttggcagaggattttaa 628
Query: 573 g 573
|
Sbjct: 629 g 629
Score = 63.9 bits (32), Expect = 4e-09
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 atgcgacgcgctcctccctctacccatttcct 32
||||||||||||||||||||||||||||||||
Sbjct: 45 atgcgacgcgctcctccctctacccatttcct 76
>gnl|LJGI|TC71101 similar to UniRef100_Q8VYU4 Cluster: At5g11350/F2I11_240; n=1;
Arabidopsis thaliana|Rep: At5g11350/F2I11_240 -
Arabidopsis thaliana (Mouse-ear cress), partial (7%)
Length = 598
Score = 392 bits (198), Expect = e-108
Identities = 201/202 (99%)
Strand = Plus / Plus
Query: 2256 tcataggtgcttctcaggcactgttgactacatatggcgatctgaaggtctgcaaaccac 2315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcataggtgcttctcaggcactgttgactacatatggcgatctgaaggtctgcaaaccac 60
Query: 2316 cagagttcttgctccaatacctaaacatgtcatggaatggactccagggttccctacaaa 2375
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cagagttcttgctccgatacctaaacatgtcatggaatggactccagggttccctacaaa 120
Query: 2376 gaaatggggtagtgatcatattgccttggtatccgagttggctttcttgaaagagggtag 2435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaaatggggtagtgatcatattgccttggtatccgagttggctttcttgaaagagggtag 180
Query: 2436 cgacatcagcaaggatgtttag 2457
||||||||||||||||||||||
Sbjct: 181 cgacatcagcaaggatgtttag 202
>gnl|LJGI|TC80964
Length = 466
Score = 75.8 bits (38), Expect = 1e-12
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 2420 tcttgaaagagggtagcgacatcagcaaggatgtttag 2457
||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcttgaaagagggtagcgacatcagcaaggatgtttag 38