Miyakogusa Predicted Gene
- Lj5g3v0539760.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0539760.1 tr|G7I6Z3|G7I6Z3_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_1g0,79.28,0,seg,NULL; PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; PPR_3,Pentatricopeptide
repe,CUFF.53249.1
(627 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 501 e-142
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 468 e-132
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 464 e-130
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 463 e-130
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 462 e-130
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 461 e-130
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 453 e-127
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 451 e-127
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 450 e-126
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 447 e-126
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 441 e-123
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 440 e-123
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 436 e-122
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 426 e-119
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 424 e-119
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 422 e-118
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 418 e-117
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 418 e-117
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 416 e-116
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 413 e-115
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 411 e-115
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 407 e-113
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 407 e-113
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 406 e-113
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 404 e-113
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 404 e-112
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 402 e-112
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 401 e-112
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 400 e-111
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 398 e-111
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 397 e-110
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 397 e-110
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 397 e-110
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 396 e-110
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 396 e-110
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 396 e-110
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 394 e-110
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 394 e-110
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 392 e-109
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 390 e-108
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 389 e-108
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 385 e-107
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 385 e-107
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 384 e-106
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 383 e-106
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 383 e-106
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 382 e-106
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 381 e-106
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 379 e-105
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 378 e-105
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 375 e-104
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 375 e-104
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 375 e-104
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 374 e-104
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 372 e-103
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 369 e-102
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 367 e-101
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 366 e-101
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 363 e-100
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 363 e-100
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 359 3e-99
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 359 3e-99
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 355 4e-98
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 352 5e-97
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 351 1e-96
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 350 1e-96
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 350 1e-96
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 347 1e-95
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 346 3e-95
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 345 5e-95
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 344 1e-94
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 342 4e-94
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 342 6e-94
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 338 5e-93
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 332 4e-91
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 331 1e-90
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 327 2e-89
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 325 6e-89
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 3e-87
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 315 5e-86
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 309 4e-84
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 304 2e-82
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 296 2e-80
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 5e-80
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 3e-79
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 3e-79
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 290 2e-78
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 5e-78
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 9e-78
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 287 1e-77
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 5e-77
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 7e-77
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 5e-76
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 278 1e-74
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 4e-74
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 4e-74
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 275 5e-74
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 2e-73
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 5e-73
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 2e-70
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 263 3e-70
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 5e-70
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 261 1e-69
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 6e-69
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 7e-69
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 2e-68
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 256 3e-68
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 7e-68
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 253 4e-67
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 4e-67
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 2e-66
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 250 3e-66
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 5e-66
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 249 6e-66
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 2e-65
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 2e-65
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 4e-65
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 5e-65
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 245 7e-65
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 245 8e-65
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 244 2e-64
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 9e-64
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 6e-63
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 4e-62
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 235 6e-62
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 234 2e-61
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 2e-61
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 3e-61
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 4e-61
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 7e-61
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 8e-61
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 4e-60
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 1e-59
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 2e-58
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 3e-58
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 222 6e-58
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 9e-58
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 9e-58
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 2e-57
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 3e-57
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 4e-57
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 4e-57
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 3e-56
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 4e-56
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 4e-56
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 4e-55
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 7e-55
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 8e-55
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 4e-54
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 3e-53
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 8e-53
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 205 9e-53
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 2e-52
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 2e-52
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 6e-52
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 2e-51
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 2e-50
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 196 4e-50
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 194 1e-49
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 3e-49
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 3e-49
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 191 1e-48
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 6e-48
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 5e-46
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 3e-45
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 4e-45
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 8e-45
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 3e-43
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 4e-42
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 8e-36
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 4e-34
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 6e-34
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 133 4e-31
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 6e-20
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 9e-20
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 95 2e-19
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 3e-19
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 93 5e-19
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 93 6e-19
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 6e-18
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 87 4e-17
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 84 3e-16
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 4e-16
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 7e-16
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 82 1e-15
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 81 3e-15
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 3e-15
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 79 8e-15
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 4e-14
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 76 6e-14
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 8e-14
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-14
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 76 9e-14
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 75 2e-13
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 74 3e-13
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 5e-13
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 4e-12
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 8e-12
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 69 1e-11
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 66 9e-11
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-10
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 64 4e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 64 4e-10
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 63 6e-10
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 63 7e-10
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 62 8e-10
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 60 4e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 60 6e-09
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 59 1e-08
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 59 1e-08
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 5e-08
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 5e-08
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 55 2e-07
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 53 5e-07
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-05
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 501 bits (1290), Expect = e-142, Method: Compositional matrix adjust.
Identities = 240/525 (45%), Positives = 350/525 (66%), Gaps = 14/525 (2%)
Query: 105 FDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVV-PNKFTYPFVLKACAGLSDLRLGK 163
+ F++NTLIR +A S S+ LYR M G+V P+ TYPF++KA ++D+RLG+
Sbjct: 83 INVFIWNTLIRGYAEIGNSISA-FSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGE 141
Query: 164 AVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTW 223
+H V++ GF ++VQN+++H+Y A KVFD+ P+ D V W
Sbjct: 142 TIHSVVIRSGFGSLIYVQNSLLHLYANCGDVAS-----------AYKVFDKMPEKDLVAW 190
Query: 224 SAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEW 283
+++I G+A G A+ L+ EM G+ PD T+VS+L+ACA +GAL LGK + Y+
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250
Query: 284 KKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSL 343
+ +++ N L+D++A+CG V++A LF +M VSWTS+IVGLA++G G EA+ L
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 310
Query: 344 FDEM-VEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLL 402
F M +G+ P +++F+G+L AC H +V +G YF M + I P+IEH+GCMVDLL
Sbjct: 311 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 370
Query: 403 SRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYV 462
+RAG VK+A +++++MP++PN +IWR+++ AC G+ L E ++L+ EP H +YV
Sbjct: 371 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYV 430
Query: 463 LLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYE 522
LLSN+YA +RW K+R+ M G+KKVPG +++E+ N + EF+ GDKSH Q IY
Sbjct: 431 LLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYA 490
Query: 523 MVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVK 582
+ EM ++ GYVP S V +D++EE+KE+A+ HSEK+AIAF L++TP +PI +VK
Sbjct: 491 KLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVK 550
Query: 583 NLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
NLRVC DCH A K +SKVYNREIVVRDR+RFHHFKNG CSC D+W
Sbjct: 551 NLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 468 bits (1204), Expect = e-132, Method: Compositional matrix adjust.
Identities = 251/571 (43%), Positives = 349/571 (61%), Gaps = 36/571 (6%)
Query: 73 KFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYR 132
K SS+F+ ++YA S + + +F++NTLIRA AH K LYR
Sbjct: 88 KILQLSSSFSDVNYAFRVFDSIE--------NHSSFMWNTLIRACAHDVSRKEEAFMLYR 139
Query: 133 TMLRYG-VVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXX 191
ML G P+K T+PFVLKACA + GK VH +VK GF D++V N +IH+Y
Sbjct: 140 KMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSC 199
Query: 192 XXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGV 251
LA KVFDE P+ V+W++MI R G A+ LFREMQ
Sbjct: 200 GCLD-----------LARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSF 247
Query: 252 CPDEITMVSVLTACADLGALELGKWLESYIEWK---KIPKSVELCNALIDMFAKCGDVDK 308
PD TM SVL+ACA LG+L LG W +++ K + V + N+LI+M+ KCG +
Sbjct: 248 EPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRM 307
Query: 309 AMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVE--QGVEPDDVSFIGVLSAC 366
A +F+ M + SW ++I+G A HGR EA++ FD MV+ + V P+ V+F+G+L AC
Sbjct: 308 AEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIAC 367
Query: 367 CHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQII 426
H V+KGR YF+ M ++ I P +EHYGC+VDL++RAG++ EA+D V +MP++P+ +I
Sbjct: 368 NHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVI 427
Query: 427 WRSIITACHARG-ELKLGESISKELLRNEPTHESN-------YVLLSNIYAKLRRWEQKT 478
WRS++ AC +G ++L E I++ ++ + +ES+ YVLLS +YA RW
Sbjct: 428 WRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVG 487
Query: 479 KVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVP 538
VR++M G++K PG + IE+N EF AGD SH Q KQIY+ + + ++ GY+P
Sbjct: 488 IVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLP 547
Query: 539 TTSQV-LLD-IDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKF 596
SQ L+D ++ KE +L HSE+LAIAF L+N PP TPIRI KNLRVC DCH TK
Sbjct: 548 DRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKL 607
Query: 597 ISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
ISKV+N EI+VRDR RFHHFK+G CSC D+W
Sbjct: 608 ISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 107/272 (39%), Gaps = 42/272 (15%)
Query: 258 MVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD 317
+ S+ C+D+ L+ + + P ++ L ++ + + DV+ A +F ++
Sbjct: 51 IFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIE 110
Query: 318 SCTIVSWTSVIVGLAMH-GRGSEAVSLFDEMVEQG-VEPDDVSFIGVLSACC-------- 367
+ + W ++I A R EA L+ +M+E+G PD +F VL AC
Sbjct: 111 NHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEG 170
Query: 368 ---HSKLVDKGRSYFNSMEGNFGIVPKIEHYGC---------------------MVDLLS 403
H ++V G + + N G++ GC M+D L
Sbjct: 171 KQVHCQIVKHG--FGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALV 228
Query: 404 RAGFVKEALDFVRTM--PVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNY 461
R G AL R M EP+ +S+++AC G L LG LLR +
Sbjct: 229 RFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD 288
Query: 462 VLLSN----IYAKLRRWEQKTKVREMMDMRGM 489
VL+ N +Y K +V + M R +
Sbjct: 289 VLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDL 320
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 464 bits (1193), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/558 (41%), Positives = 353/558 (63%), Gaps = 21/558 (3%)
Query: 71 LTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQL 130
L F S T +++ YA + + P D +FN++ R ++ L
Sbjct: 66 LINFCTESPTESSMSYARHLF---EAMSEP-----DIVIFNSMARGYSRFTNPLEV-FSL 116
Query: 131 YRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXX 190
+ +L G++P+ +T+P +LKACA L G+ +H +K G DD+++V T+I+MY
Sbjct: 117 FVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTE 176
Query: 191 XXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMG 250
A VFD + V ++AMI GYARR + A+ LFREMQ
Sbjct: 177 CEDVDS-----------ARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKY 225
Query: 251 VCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAM 310
+ P+EIT++SVL++CA LG+L+LGKW+ Y + K V++ ALIDMFAKCG +D A+
Sbjct: 226 LKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAV 285
Query: 311 NLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSK 370
++F +M +W+++IV A HG+ +++ +F+ M + V+PD+++F+G+L+AC H+
Sbjct: 286 SIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTG 345
Query: 371 LVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSI 430
V++GR YF+ M FGIVP I+HYG MVDLLSRAG +++A +F+ +P+ P ++WR +
Sbjct: 346 RVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRIL 405
Query: 431 ITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMK 490
+ AC + L L E +S+ + + +H +YV+LSN+YA+ ++WE +R++M R
Sbjct: 406 LAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAV 465
Query: 491 KVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVL-LDIDE 549
KVPG + IE+NN + EF +GD +++ +DEM +E+K +GYVP TS V+ ++++
Sbjct: 466 KVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMND 525
Query: 550 EDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRD 609
++KE L HSEKLAI F LLNTPPGT IR+VKNLRVC DCH+A K IS ++ R++V+RD
Sbjct: 526 QEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRD 585
Query: 610 RNRFHHFKNGLCSCGDFW 627
RFHHF++G CSCGDFW
Sbjct: 586 VQRFHHFEDGKCSCGDFW 603
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 463 bits (1192), Expect = e-130, Method: Compositional matrix adjust.
Identities = 218/473 (46%), Positives = 319/473 (67%), Gaps = 12/473 (2%)
Query: 156 LSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDES 215
++D+RLG+ +H V++ GF ++VQN+++H+Y A KVFD+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVAS-----------AYKVFDKM 49
Query: 216 PKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGK 275
P+ D V W+++I G+A G A+ L+ EM G+ PD T+VS+L+ACA +GAL LGK
Sbjct: 50 PEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGK 109
Query: 276 WLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHG 335
+ Y+ + +++ N L+D++A+CG V++A LF +M VSWTS+IVGLA++G
Sbjct: 110 RVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNG 169
Query: 336 RGSEAVSLFDEM-VEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEH 394
G EA+ LF M +G+ P +++F+G+L AC H +V +G YF M + I P+IEH
Sbjct: 170 FGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEH 229
Query: 395 YGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNE 454
+GCMVDLL+RAG VK+A +++++MP++PN +IWR+++ AC G+ L E ++L+ E
Sbjct: 230 FGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLE 289
Query: 455 PTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSH 514
P H +YVLLSN+YA +RW K+R+ M G+KKVPG +++E+ N + EF+ GDKSH
Sbjct: 290 PNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSH 349
Query: 515 DQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPP 574
Q IY + EM ++ GYVP S V +D++EE+KE+A+ HSEK+AIAF L++TP
Sbjct: 350 PQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPE 409
Query: 575 GTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
+PI +VKNLRVC DCH A K +SKVYNREIVVRDR+RFHHFKNG CSC D+W
Sbjct: 410 RSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 124/269 (46%), Gaps = 24/269 (8%)
Query: 79 STFNAIHYATSFLFSDDPTTAPRASSFDAF---------LFNTLIRAFAHTPQSKSSGLQ 129
S F ++ Y + L AS++ F +N++I FA + + + L
Sbjct: 17 SGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEA-LA 75
Query: 130 LYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYX 189
LY M G+ P+ FT +L ACA + L LGK VH ++K G +LH N ++ +Y
Sbjct: 76 LYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYA 135
Query: 190 XXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQ-V 248
A +FDE +SV+W+++I G A G A+ LF+ M+
Sbjct: 136 RCGRVEE-----------AKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMEST 184
Query: 249 MGVCPDEITMVSVLTACADLGALELG-KWLESYIEWKKIPKSVELCNALIDMFAKCGDVD 307
G+ P EIT V +L AC+ G ++ G ++ E KI +E ++D+ A+ G V
Sbjct: 185 EGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVK 244
Query: 308 KAMNLFRQMD-SCTIVSWTSVIVGLAMHG 335
KA + M +V W +++ +HG
Sbjct: 245 KAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 462 bits (1188), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/524 (42%), Positives = 340/524 (64%), Gaps = 14/524 (2%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +N +I +A T K + L+L++ M++ V P++ T V+ ACA + LG+ V
Sbjct: 230 DVVSWNAMISGYAETGNYKEA-LELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 288
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H + GF +L + N +I +Y A +F+ P D ++W+
Sbjct: 289 HLWIDDHGFGSNLKIVNALIDLYSKCGELET-----------ACGLFERLPYKDVISWNT 337
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIE--W 283
+IGGY A+ LF+EM G P+++TM+S+L ACA LGA+++G+W+ YI+
Sbjct: 338 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 397
Query: 284 KKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSL 343
K + + L +LIDM+AKCGD++ A +F + ++ SW ++I G AMHGR + L
Sbjct: 398 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 457
Query: 344 FDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLS 403
F M + G++PDD++F+G+LSAC HS ++D GR F +M ++ + PK+EHYGCM+DLL
Sbjct: 458 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 517
Query: 404 RAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVL 463
+G KEA + + M +EP+ +IW S++ AC G ++LGES ++ L++ EP + +YVL
Sbjct: 518 HSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVL 577
Query: 464 LSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEM 523
LSNIYA RW + K R +++ +GMKKVPG + IE+++ + EF+ GDK H + ++IY M
Sbjct: 578 LSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGM 637
Query: 524 VDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKN 583
++EM +++AG+VP TS+VL +++EE KE AL HSEKLAIAF L++T PGT + IVKN
Sbjct: 638 LEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKN 697
Query: 584 LRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
LRVC +CH ATK ISK+Y REI+ RDR RFHHF++G+CSC D+W
Sbjct: 698 LRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 212/450 (47%), Gaps = 69/450 (15%)
Query: 63 GLINNPLVLTK---FAATSSTFNAIHYATS-FLFSDDPTTAPRASSFDAFLFNTLIRAFA 118
GL N L+K F S F + YA S F +P + ++NT+ R A
Sbjct: 60 GLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP---------NLLIWNTMFRGHA 110
Query: 119 HTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDL 178
+ S L+LY M+ G++PN +T+PFVLK+CA + G+ +HG V+K G D DL
Sbjct: 111 LS-SDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 169
Query: 179 HVQNTMIHMYXX--------------------XXXXXXXXXXXXXXXXLAGKVFDESPKT 218
+V ++I MY A K+FDE P
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 229
Query: 219 DSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLE 278
D V+W+AMI GYA G+ A+ LF++M V PDE TMV+V++ACA G++ELG+ +
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289
Query: 279 SYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGS 338
+I+ ++++ NALID+++KCG+++ A LF ++ ++SW ++I G
Sbjct: 290 LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYK 349
Query: 339 EAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNF-GIVPKIEHYGC 397
EA+ LF EM+ G P+DV+ + +L AC H +D GR ++ G+
Sbjct: 350 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 409
Query: 398 MVDLLSRAGFVKEA----------------------------------LDFVRTMPVEPN 423
++D+ ++ G ++ A +R + ++P+
Sbjct: 410 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPD 469
Query: 424 QIIWRSIITACHARGELKLGESISKELLRN 453
I + +++AC G L LG I + + ++
Sbjct: 470 DITFVGLLSACSHSGMLDLGRHIFRTMTQD 499
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 142/339 (41%), Gaps = 44/339 (12%)
Query: 149 VLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLA 208
+L C L LR+ +H ++K G + + + +I A
Sbjct: 39 LLHNCKTLQSLRI---IHAQMIKIGLHNTNYALSKLIEF--------CILSPHFEGLPYA 87
Query: 209 GKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADL 268
VF + + + W+ M G+A A+ L+ M +G+ P+ T VL +CA
Sbjct: 88 ISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKS 147
Query: 269 GA-----------LELGKWLESYIE-------------------WKKIP-KSVELCNALI 297
A L+LG L+ Y+ + K P + V ALI
Sbjct: 148 KAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALI 207
Query: 298 DMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDV 357
+A G ++ A LF ++ +VSW ++I G A G EA+ LF +M++ V PD+
Sbjct: 208 KGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 267
Query: 358 SFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRT 417
+ + V+SAC S ++ GR ++ + G ++ ++DL S+ G ++ A
Sbjct: 268 TMVTVVSACAQSGSIELGRQVHLWID-DHGFGSNLKIVNALIDLYSKCGELETACGLFER 326
Query: 418 MPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPT 456
+P + + I W ++I K + +E+LR+ T
Sbjct: 327 LPYK-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 364
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 461 bits (1185), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/542 (42%), Positives = 331/542 (61%), Gaps = 23/542 (4%)
Query: 108 FLFNTLIRAFAHTPQSKSSGLQLYRTMLRYG--VVPNKFTYPFVLKACAGLSDLRLGKAV 165
F N++IRA +P + S YR +L G + P+ +T F+++AC GL G V
Sbjct: 72 FALNSMIRAHCKSPVPEKS-FDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQV 130
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXX--------------------XXXXXXXXXXXXXX 205
HG ++ GFD+D HVQ +I +Y
Sbjct: 131 HGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDV 190
Query: 206 XLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTAC 265
A K+F+ P+ D + W+AMI GYA+ G S A+ +F MQ+ GV + + M+SVL+AC
Sbjct: 191 VFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSAC 250
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
LGAL+ G+W SYIE KI +V L L+D++AKCGD++KAM +F M+ + +W+
Sbjct: 251 TQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWS 310
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
S + GLAM+G G + + LF M + GV P+ V+F+ VL C VD+G+ +F+SM
Sbjct: 311 SALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNE 370
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGES 445
FGI P++EHYGC+VDL +RAG +++A+ ++ MP++P+ +W S++ A L+LG
Sbjct: 371 FGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVL 430
Query: 446 ISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMC 505
SK++L E + YVLLSNIYA W+ + VR+ M +G++K PG +++E+N E+
Sbjct: 431 ASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVH 490
Query: 506 EFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAI 565
EF GDKSH +Y QI + ++ R ++ AGY T+ V+ DIDEE+KEDAL HSEK AI
Sbjct: 491 EFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAI 550
Query: 566 AFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGD 625
AF +++ PIRIVKNLRVC DCH + ISK++NREI+VRDRNRFHHFK+G CSC
Sbjct: 551 AFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNG 610
Query: 626 FW 627
FW
Sbjct: 611 FW 612
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 453 bits (1166), Expect = e-127, Method: Compositional matrix adjust.
Identities = 233/563 (41%), Positives = 341/563 (60%), Gaps = 31/563 (5%)
Query: 95 DPTTAPRASSFDAFLFNTLIRAFAH---TPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLK 151
+P R ++FL+N +IRA H +PQ + S + +Y M + V P+ T+PF+L
Sbjct: 12 NPIFHIRHLKLESFLWNIIIRAIVHNVSSPQ-RHSPISVYLRMRNHRVSPDFHTFPFLLP 70
Query: 152 ACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXX--------------------X 191
+ L LG+ H ++ FG D D V+ ++++MY
Sbjct: 71 SFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPA 130
Query: 192 XXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMG- 250
A K+FDE P+ + ++WS +I GY G A+ LFREMQ+
Sbjct: 131 WNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKP 190
Query: 251 ----VCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDV 306
V P+E TM +VL+AC LGALE GKW+ +YI+ + + L ALIDM+AKCG +
Sbjct: 191 NEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSL 250
Query: 307 DKAMNLFRQMDSCTIV-SWTSVIVGLAMHGRGSEAVSLFDEMV-EQGVEPDDVSFIGVLS 364
++A +F + S V +++++I LAM+G E LF EM + P+ V+F+G+L
Sbjct: 251 ERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILG 310
Query: 365 ACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQ 424
AC H L+++G+SYF M FGI P I+HYGCMVDL R+G +KEA F+ +MP+EP+
Sbjct: 311 ACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDV 370
Query: 425 IIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMM 484
+IW S+++ G++K E K L+ +P + YVLLSN+YAK RW + +R M
Sbjct: 371 LIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEM 430
Query: 485 DMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVL 544
+++G+ KVPG + +E+ + EFV GD+S + ++IY M+DE+ + ++ AGYV T +VL
Sbjct: 431 EVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVL 490
Query: 545 LDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNRE 604
LD++E+DKE AL HSEKLAIAF L+ T PGTP+RI+KNLR+C DCH K ISK+++RE
Sbjct: 491 LDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSRE 550
Query: 605 IVVRDRNRFHHFKNGLCSCGDFW 627
IVVRD NRFHHF++G CSC DFW
Sbjct: 551 IVVRDCNRFHHFRDGSCSCRDFW 573
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 451 bits (1159), Expect = e-127, Method: Compositional matrix adjust.
Identities = 233/603 (38%), Positives = 360/603 (59%), Gaps = 61/603 (10%)
Query: 63 GLINNPLVLTKF-----AATSSTFNAIHYAT-SFLFSDDPTTAPRASSFDAFLFNTLIRA 116
GL+ + +TKF ++TSS F + YA F D P D FL+N +IR
Sbjct: 41 GLMQDSYAITKFLSFCISSTSSDF--LPYAQIVFDGFDRP---------DTFLWNLMIRG 89
Query: 117 FAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDD 176
F+ + + + S L LY+ ML N +T+P +LKAC+ LS +H + K G+++
Sbjct: 90 FSCSDEPERS-LLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEN 148
Query: 177 DLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHS 236
D++ N++I+ Y LA +FD P+ D V+W+++I GY + G
Sbjct: 149 DVYAVNSLINSYAVTGNFK-----------LAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197
Query: 237 SRAVGLFR-------------------------------EMQVMGVCPDEITMVSVLTAC 265
A+ LFR EMQ V PD +++ + L+AC
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
A LGALE GKW+ SY+ +I L LIDM+AKCG++++A+ +F+ + ++ +WT
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWT 317
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
++I G A HG G EA+S F EM + G++P+ ++F VL+AC ++ LV++G+ F SME +
Sbjct: 318 ALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERD 377
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGES 445
+ + P IEHYGC+VDLL RAG + EA F++ MP++PN +IW +++ AC ++LGE
Sbjct: 378 YNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEE 437
Query: 446 ISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMC 505
I + L+ +P H YV +NI+A ++W++ + R +M +G+ KVPG + I L
Sbjct: 438 IGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTH 497
Query: 506 EFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLLD-IDEEDKEDALYKHSEKLA 564
EF+AGD+SH + ++I M R+++ GYVP ++LLD +D++++E +++HSEKLA
Sbjct: 498 EFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLA 557
Query: 565 IAFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCG 624
I + L+ T PGT IRI+KNLRVC+DCH TK ISK+Y R+IV+RDR RFHHF++G CSCG
Sbjct: 558 ITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCG 617
Query: 625 DFW 627
D+W
Sbjct: 618 DYW 620
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 450 bits (1158), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/524 (42%), Positives = 322/524 (61%), Gaps = 12/524 (2%)
Query: 104 SFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGK 163
+FD +N ++ + + + L+L+ M + G + FT V K C L + GK
Sbjct: 479 NFDLVAWNAMMAGYTQSHDGHKT-LKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGK 537
Query: 164 AVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTW 223
VH +K G+D DL V + ++ MY A FD P D V W
Sbjct: 538 QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSA-----------AQFAFDSIPVPDDVAW 586
Query: 224 SAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEW 283
+ MI G G RA +F +M++MGV PDE T+ ++ A + L ALE G+ + +
Sbjct: 587 TTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALK 646
Query: 284 KKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSL 343
+ +L+DM+AKCG +D A LF++++ I +W +++VGLA HG G E + L
Sbjct: 647 LNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQL 706
Query: 344 FDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLS 403
F +M G++PD V+FIGVLSAC HS LV + + SM G++GI P+IEHY C+ D L
Sbjct: 707 FKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALG 766
Query: 404 RAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVL 463
RAG VK+A + + +M +E + ++R+++ AC +G+ + G+ ++ +LL EP S YVL
Sbjct: 767 RAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVL 826
Query: 464 LSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEM 523
LSN+YA +W++ R MM +KK PG + IE+ N++ FV D+S+ Q + IY
Sbjct: 827 LSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRK 886
Query: 524 VDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKN 583
V +M R+IK+ GYVP T L+D++EE+KE ALY HSEKLA+AF LL+TPP TPIR++KN
Sbjct: 887 VKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKN 946
Query: 584 LRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
LRVC DCH+A K+I+KVYNREIV+RD NRFH FK+G+CSCGD+W
Sbjct: 947 LRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 171/380 (45%), Gaps = 25/380 (6%)
Query: 63 GLINNPLVLTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLF-NTLIRAFAHTP 121
GL N + L A S + SF +D ASS +F N + + H+
Sbjct: 241 GLNPNEITLRLLARISGDDSDAGQVKSFANGND------ASSVSEIIFRNKGLSEYLHSG 294
Query: 122 QSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQ 181
Q S+ L+ + M+ V ++ T+ +L + L LG+ VH +K G D L V
Sbjct: 295 QY-SALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVS 353
Query: 182 NTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVG 241
N++I+MY A VFD + D ++W+++I G A+ G AV
Sbjct: 354 NSLINMYCKLRKFG-----------FARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVC 402
Query: 242 LFREMQVMGVCPDEITMVSVLTACADL-GALELGKWLESY-IEWKKIPKSVELCNALIDM 299
LF ++ G+ PD+ TM SVL A + L L L K + + I+ + S + ALID
Sbjct: 403 LFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF-VSTALIDA 461
Query: 300 FAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSF 359
+++ + +A LF + + +V+W +++ G G + + LF M +QG DD +
Sbjct: 462 YSRNRCMKEAEILFERHN-FDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTL 520
Query: 360 IGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP 419
V C +++G+ ++ G + ++D+ + G + A ++P
Sbjct: 521 ATVFKTCGFLFAINQGKQ-VHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP 579
Query: 420 VEPNQIIWRSIITACHARGE 439
V P+ + W ++I+ C GE
Sbjct: 580 V-PDDVAWTTMISGCIENGE 598
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 153/356 (42%), Gaps = 18/356 (5%)
Query: 97 TTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGL 156
T S D +N++I A + + L+ +LR G+ P+++T VLKA + L
Sbjct: 371 TVFDNMSERDLISWNSVIAGIAQNGL-EVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSL 429
Query: 157 SD-LRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDES 215
+ L L K VH +K D V +I Y ++ E
Sbjct: 430 PEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKE------------AEILFER 477
Query: 216 PKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGK 275
D V W+AM+ GY + + + LF M G D+ T+ +V C L A+ GK
Sbjct: 478 HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGK 537
Query: 276 WLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHG 335
+ +Y + + + ++DM+ KCGD+ A F + V+WT++I G +G
Sbjct: 538 QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENG 597
Query: 336 RGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRS-YFNSMEGNFGIVPKIEH 394
A +F +M GV PD+ + + A +++GR + N+++ N P +
Sbjct: 598 EEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG- 656
Query: 395 YGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKEL 450
+VD+ ++ G + +A + + + N W +++ GE K + K++
Sbjct: 657 -TSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLVGLAQHGEGKETLQLFKQM 710
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 87/208 (41%), Gaps = 16/208 (7%)
Query: 157 SDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESP 216
SDL LGK H ++ F + + + N +I MY A +VFD+ P
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTY-----------ARRVFDKMP 101
Query: 217 KTDSVTWSAMIGGYARRGHS-----SRAVGLFREMQVMGVCPDEITMVSVLTACADLGAL 271
D V+W++++ YA+ +A LFR ++ V +T+ +L C G +
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 272 ELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGL 331
+ Y + + AL++++ K G V + LF +M +V W ++
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY 221
Query: 332 AMHGRGSEAVSLFDEMVEQGVEPDDVSF 359
G EA+ L G+ P++++
Sbjct: 222 LEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 129/345 (37%), Gaps = 65/345 (18%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQ----LYRTMLRYGVVPNKFTYPFVLKACAGLSDLRL 161
D +N+++ A+A + + +Q L+R + + V ++ T +LK C +
Sbjct: 104 DLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWA 163
Query: 162 GKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKV-FDESPKTDS 220
++ HG K G D D V ++++Y GKV F+E P D
Sbjct: 164 SESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKE------------GKVLFEEMPYRDV 211
Query: 221 VTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESY 280
V W+ M+ Y G A+ L G+ P+EIT+ + D + G+
Sbjct: 212 VLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDS--DAGQ----- 264
Query: 281 IEWKKIPKSVELCNALIDMFAKCGDVDKAMN-LFRQMDSCTIVSWTSVIVGLAMH---GR 336
+ FA D +FR GL+ + G+
Sbjct: 265 ----------------VKSFANGNDASSVSEIIFRNK-------------GLSEYLHSGQ 295
Query: 337 GSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYG 396
S + F +MVE VE D V+FI +L+ + G+ + M G+ +
Sbjct: 296 YSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQ-VHCMALKLGLDLMLTVSN 354
Query: 397 CMVDL---LSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARG 438
++++ L + GF + D + E + I W S+I G
Sbjct: 355 SLINMYCKLRKFGFARTVFDNMS----ERDLISWNSVIAGIAQNG 395
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 447 bits (1151), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/560 (40%), Positives = 351/560 (62%), Gaps = 24/560 (4%)
Query: 70 VLTKFAATSSTFNAIHYATS-FLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGL 128
VL K A S N+++YA S F DDP T F FNT+IR + + S L
Sbjct: 69 VLAK-CAHSGWENSMNYAASIFRGIDDPCT---------FDFNTMIRGYVNV-MSFEEAL 117
Query: 129 QLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMY 188
Y M++ G P+ FTYP +LKAC L +R GK +HG V K G + D+ VQN++I+MY
Sbjct: 118 CFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMY 177
Query: 189 XXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM-Q 247
L+ VF++ + +WS+M+ A G S + LFR M
Sbjct: 178 GRCGEME-----------LSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCS 226
Query: 248 VMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVD 307
+ +E MVS L ACA+ GAL LG + ++ ++ + +L+DM+ KCG +D
Sbjct: 227 ETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLD 286
Query: 308 KAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACC 367
KA+++F++M+ ++++++I GLA+HG G A+ +F +M+++G+EPD V ++ VL+AC
Sbjct: 287 KALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACS 346
Query: 368 HSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIW 427
HS LV +GR F M + P EHYGC+VDLL RAG ++EAL+ ++++P+E N +IW
Sbjct: 347 HSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIW 406
Query: 428 RSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMR 487
R+ ++ C R ++LG+ ++ELL+ + +Y+L+SN+Y++ + W+ + R + ++
Sbjct: 407 RTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIK 466
Query: 488 GMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDI 547
G+K+ PG +++EL + FV+ D+SH + K+IY+M+ +M ++K GY P +Q+LL++
Sbjct: 467 GLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNV 526
Query: 548 DEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVV 607
DEE+K++ L HS+K+AIAF LL TPPG+ I+I +NLR+C DCH+ TK IS +Y REIVV
Sbjct: 527 DEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVV 586
Query: 608 RDRNRFHHFKNGLCSCGDFW 627
RDRNRFH FK G CSC D+W
Sbjct: 587 RDRNRFHLFKGGTCSCKDYW 606
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 441 bits (1133), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/543 (40%), Positives = 333/543 (61%), Gaps = 22/543 (4%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
+ F+FN LIR F+ T S Y ML+ + P+ T+PF++KA + + + +G+
Sbjct: 81 NLFVFNLLIRCFS-TGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQT 139
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXX---------XXXXXXXLAG------- 209
H +V+FGF +D++V+N+++HMY +AG
Sbjct: 140 HSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMV 199
Query: 210 ----KVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTAC 265
++FDE P + TWS MI GYA+ +A+ LF M+ GV +E MVSV+++C
Sbjct: 200 ENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSC 259
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
A LGALE G+ Y+ + ++ L AL+DMF +CGD++KA+++F + +SW+
Sbjct: 260 AHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWS 319
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
S+I GLA+HG +A+ F +M+ G P DV+F VLSAC H LV+KG + +M+ +
Sbjct: 320 SIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKD 379
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGES 445
GI P++EHYGC+VD+L RAG + EA +F+ M V+PN I +++ AC ++ E
Sbjct: 380 HGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAER 439
Query: 446 ISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMC 505
+ L++ +P H YVLLSNIYA +W++ +R+MM + +KK PG ++IE++ ++
Sbjct: 440 VGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKIN 499
Query: 506 EFVAG-DKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLA 564
+F G D+ H + +I +E+ +I+ GY T D+DEE+KE +++ HSEKLA
Sbjct: 500 KFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLA 559
Query: 565 IAFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCG 624
IA+ ++ T PGT IRIVKNLRVCEDCH+ TK IS+VY RE++VRDRNRFHHF+NG+CSC
Sbjct: 560 IAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCR 619
Query: 625 DFW 627
D+W
Sbjct: 620 DYW 622
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 137/329 (41%), Gaps = 42/329 (12%)
Query: 143 KFTYP--FVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXX 200
+F +P +L++C+ SDL++ +HG +++ D+ V + ++ +
Sbjct: 10 RFKHPKLALLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLAL----CVDDSTFNK 62
Query: 201 XXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVS 260
A +F + + ++ +I ++ S+A G + +M + PD IT
Sbjct: 63 PTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPF 122
Query: 261 VLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCT 320
++ A +++ + +G+ S I V + N+L+ M+A CG + A +F QM
Sbjct: 123 LIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRD 182
Query: 321 IVSWTSVIVGLAMHGRGSEAVSLFDEMVE------------------------------- 349
+VSWTS++ G G A +FDEM
Sbjct: 183 VVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKR 242
Query: 350 QGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVK 409
+GV ++ + V+S+C H ++ G + + + V I +VD+ R G ++
Sbjct: 243 EGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTA-LVDMFWRCGDIE 301
Query: 410 EALDFVRTMPVEPNQIIWRSIITACHARG 438
+A+ +P E + + W SII G
Sbjct: 302 KAIHVFEGLP-ETDSLSWSSIIKGLAVHG 329
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 440 bits (1131), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/569 (39%), Positives = 342/569 (60%), Gaps = 58/569 (10%)
Query: 106 DAFLFNTLIRAFAHTPQSKS--SGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGK 163
+ F +NT+IR F+ + + K+ + Y M V PN+FT+P VLKACA ++ GK
Sbjct: 89 NCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGK 148
Query: 164 AVHGSVVKFGF---------------------------------------------DDDL 178
+HG +K+GF D ++
Sbjct: 149 QIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEI 208
Query: 179 HVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSR 238
+ N MI Y A +FD+ + V+W+ MI GY+ G
Sbjct: 209 VLWNVMIDGYMRLGDCKA-----------ARMLFDKMRQRSVVSWNTMISGYSLNGFFKD 257
Query: 239 AVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALID 298
AV +FREM+ + P+ +T+VSVL A + LG+LELG+WL Y E I L +ALID
Sbjct: 258 AVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALID 317
Query: 299 MFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVS 358
M++KCG ++KA+++F ++ +++W+++I G A+HG+ +A+ F +M + GV P DV+
Sbjct: 318 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 359 FIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTM 418
+I +L+AC H LV++GR YF+ M G+ P+IEHYGCMVDLL R+G + EA +F+ M
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 419 PVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKT 478
P++P+ +IW++++ AC +G +++G+ ++ L+ P YV LSN+YA W + +
Sbjct: 438 PIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVS 497
Query: 479 KVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVP 538
++R M + ++K PG ++I+++ + EFV D SH + K+I M+ E+ +++ AGY P
Sbjct: 498 EMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRP 557
Query: 539 TTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFIS 598
T+QVLL+++EEDKE+ L+ HSEK+A AF L++T PG PIRIVKNLR+CEDCHS+ K IS
Sbjct: 558 ITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLIS 617
Query: 599 KVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
KVY R+I VRDR RFHHF++G CSC D+W
Sbjct: 618 KVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 120/280 (42%), Gaps = 50/280 (17%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSR--AVGLFREMQVMG-VCPDEITMVSVLTA 264
A K+F++ P+ + +W+ +I G++ A+ LF EM V P+ T SVL A
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 265 CADLGALELGKWLES--------------------YI----------------------- 281
CA G ++ GK + Y+
Sbjct: 138 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 197
Query: 282 --EWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSE 339
+ +K + L N +ID + + GD A LF +M ++VSW ++I G +++G +
Sbjct: 198 MTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKD 257
Query: 340 AVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMV 399
AV +F EM + + P+ V+ + VL A ++ G + + + GI ++
Sbjct: 258 AVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIRIDDVLGSALI 316
Query: 400 DLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGE 439
D+ S+ G +++A+ +P E N I W ++I G+
Sbjct: 317 DMYSKCGIIEKAIHVFERLPRE-NVITWSAMINGFAIHGQ 355
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/544 (40%), Positives = 329/544 (60%), Gaps = 27/544 (4%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D FLF I A K LY +L + PN+FT+ +LK+C+ S GK +
Sbjct: 94 DLFLFTAAINT-ASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLI 148
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXX--------------------XXXXXXXXXXXXXXX 205
H V+KFG D +V ++ +Y
Sbjct: 149 HTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNV 208
Query: 206 XLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVC-PDEITMVSVLTA 264
A +FD + D V+W+ MI GYA+ G + A+ LF+++ G PDEIT+V+ L+A
Sbjct: 209 EAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSA 268
Query: 265 CADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSW 324
C+ +GALE G+W+ +++ +I +V++C LIDM++KCG +++A+ +F IV+W
Sbjct: 269 CSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAW 328
Query: 325 TSVIVGLAMHGRGSEAVSLFDEMVE-QGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSME 383
++I G AMHG +A+ LF+EM G++P D++FIG L AC H+ LV++G F SM
Sbjct: 329 NAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMG 388
Query: 384 GNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLG 443
+GI PKIEHYGC+V LL RAG +K A + ++ M ++ + ++W S++ +C G+ LG
Sbjct: 389 QEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLG 448
Query: 444 ESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNE 503
+ I++ L+ + YVLLSNIYA + +E KVR +M +G+ K PG + IE+ N+
Sbjct: 449 KEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENK 508
Query: 504 MCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKL 563
+ EF AGD+ H + K+IY M+ ++ IK GYVP T+ VL D++E +KE +L HSE+L
Sbjct: 509 VHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERL 568
Query: 564 AIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSC 623
AIA+ L++T PG+P++I KNLRVC DCH+ TK ISK+ R+IV+RDRNRFHHF +G CSC
Sbjct: 569 AIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSC 628
Query: 624 GDFW 627
GDFW
Sbjct: 629 GDFW 632
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 118/256 (46%), Gaps = 30/256 (11%)
Query: 211 VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGA 270
+F ++ D ++A I + G +A L+ ++ + P+E T S+L +C+
Sbjct: 86 LFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSG 145
Query: 271 -------LELGKWLESYIE-------------------WKKIP-KSVELCNALIDMFAKC 303
L+ G ++ Y+ + ++P +S+ A+I +AK
Sbjct: 146 KLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQ 205
Query: 304 GDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQG-VEPDDVSFIGV 362
G+V+ A LF M IVSW +I G A HG ++A+ LF +++ +G +PD+++ +
Sbjct: 206 GNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAA 265
Query: 363 LSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEP 422
LSAC ++ GR + + + I ++ ++D+ S+ G ++EA+ P
Sbjct: 266 LSACSQIGALETGR-WIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTP-RK 323
Query: 423 NQIIWRSIITACHARG 438
+ + W ++I G
Sbjct: 324 DIVAWNAMIAGYAMHG 339
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 426 bits (1095), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/587 (37%), Positives = 332/587 (56%), Gaps = 35/587 (5%)
Query: 67 NPLVLTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSS 126
+P V T F ++ I+YA + S D +NT+I + +
Sbjct: 145 DPFVETGFMDMYASCGRINYARNVF--------DEMSHRDVVTWNTMIERYCRFGLVDEA 196
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIH 186
+L+ M V+P++ ++ AC ++R +A++ +++ D H+ ++
Sbjct: 197 -FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVT 255
Query: 187 MYXXXXXXXXXXXXXXXXXXL--------------------AGKVFDESPKTDSVTWSAM 226
MY A +FD++ K D V W+ M
Sbjct: 256 MYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTM 315
Query: 227 IGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKI 286
I Y + A+ +F EM G+ PD ++M SV++ACA+LG L+ KW+ S I +
Sbjct: 316 ISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGL 375
Query: 287 PKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDE 346
+ + NALI+M+AKCG +D ++F +M +VSW+S+I L+MHG S+A+SLF
Sbjct: 376 ESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFAR 435
Query: 347 MVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAG 406
M ++ VEP++V+F+GVL C HS LV++G+ F SM + I PK+EHYGCMVDL RA
Sbjct: 436 MKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRAN 495
Query: 407 FVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSN 466
++EAL+ + +MPV N +IW S+++AC GEL+LG+ +K +L EP H+ VL+SN
Sbjct: 496 LLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSN 555
Query: 467 IYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDE 526
IYA+ +RWE +R +M+ + + K G + I+ N + EF+ GDK H Q +IY +DE
Sbjct: 556 IYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDE 615
Query: 527 MGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTP------IRI 580
+ ++K AGYVP VL+D++EE+K+D + HSEKLA+ F L+N IRI
Sbjct: 616 VVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRI 675
Query: 581 VKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
VKNLRVCEDCH K +SKVY REI+VRDR RFH +KNGLCSC D+W
Sbjct: 676 VKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 159/365 (43%), Gaps = 45/365 (12%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
++ +FN +R + + + +++ L Y+ + G ++F++ +LKA + +S L G +
Sbjct: 75 ESIVFNPFLRDLSRSSEPRATIL-FYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMEL 133
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
HG K D V+ + MY A VFDE D VTW+
Sbjct: 134 HGVAFKIATLCDPFVETGFMDMYASCGRIN-----------YARNVFDEMSHRDVVTWNT 182
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
MI Y R G A LF EM+ V PDE+ + ++++AC G + + + ++
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242
Query: 286 IPKSVELCNALIDMFA-------------------------------KCGDVDKAMNLFR 314
+ L AL+ M+A KCG +D A +F
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 302
Query: 315 QMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDK 374
Q + +V WT++I EA+ +F+EM G++PD VS V+SAC + ++DK
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 362
Query: 375 GRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITAC 434
+ + + N G+ ++ ++++ ++ G + D MP N + W S+I A
Sbjct: 363 AKWVHSCIHVN-GLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINAL 420
Query: 435 HARGE 439
GE
Sbjct: 421 SMHGE 425
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 424 bits (1090), Expect = e-119, Method: Compositional matrix adjust.
Identities = 202/522 (38%), Positives = 319/522 (61%), Gaps = 12/522 (2%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +NT+I +A + + + L++ R M + P+ FT VL + D+ GK +
Sbjct: 206 DVVSYNTIIAGYAQSGMYEDA-LRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEI 264
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
HG V++ G D D+++ ++++ MY + +VF D ++W++
Sbjct: 265 HGYVIRKGIDSDVYIGSSLVDMYAKSARIED-----------SERVFSRLYCRDGISWNS 313
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
++ GY + G + A+ LFR+M V P + SV+ ACA L L LGK L Y+
Sbjct: 314 LVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGG 373
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
++ + +AL+DM++KCG++ A +F +M+ VSWT++I+G A+HG G EAVSLF+
Sbjct: 374 FGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFE 433
Query: 346 EMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRA 405
EM QGV+P+ V+F+ VL+AC H LVD+ YFNSM +G+ ++EHY + DLL RA
Sbjct: 434 EMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRA 493
Query: 406 GFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLS 465
G ++EA +F+ M VEP +W +++++C L+L E +++++ + + YVL+
Sbjct: 494 GKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMC 553
Query: 466 NIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVD 525
N+YA RW++ K+R M +G++K P + IE+ N+ FV+GD+SH +I E +
Sbjct: 554 NMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLK 613
Query: 526 EMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLR 585
+ ++++ GYV TS VL D+DEE K + L+ HSE+LA+AF ++NT PGT IR+ KN+R
Sbjct: 614 AVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIR 673
Query: 586 VCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
+C DCH A KFISK+ REI+VRD +RFHHF G CSCGD+W
Sbjct: 674 ICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 168/358 (46%), Gaps = 34/358 (9%)
Query: 110 FNTLIRAFAHTPQSK-SSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGS 168
+ ++IR F T QS S L + M G P+ +P VLK+C + DLR G++VHG
Sbjct: 73 WKSVIRCF--TDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGF 130
Query: 169 VVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXL--------------------- 207
+V+ G D DL+ N +++MY +
Sbjct: 131 IVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPF 190
Query: 208 ----AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLT 263
+VF+ P+ D V+++ +I GYA+ G A+ + REM + PD T+ SVL
Sbjct: 191 GIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLP 250
Query: 264 ACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVS 323
++ + GK + Y+ K I V + ++L+DM+AK ++ + +F ++ +S
Sbjct: 251 IFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS 310
Query: 324 WTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFN-SM 382
W S++ G +GR +EA+ LF +MV V+P V+F V+ AC H + G+ +
Sbjct: 311 WNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVL 370
Query: 383 EGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIIT--ACHARG 438
G FG I +VD+ S+ G +K A M V +++ W +II A H G
Sbjct: 371 RGGFG--SNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGHALHGHG 425
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 422 bits (1086), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/571 (38%), Positives = 327/571 (57%), Gaps = 26/571 (4%)
Query: 63 GLINNPLVLTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQ 122
G +P + TK S ++ YA T +++N L RA
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTI--------YVWNALFRALTLAGH 158
Query: 123 SKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAG----LSDLRLGKAVHGSVVKFGFDDDL 178
+ L LY M R GV ++FTY +VLKAC ++ L GK +H + + G+ +
Sbjct: 159 GEEV-LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHV 217
Query: 179 HVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSR 238
++ T++ MY A VF P + V+WSAMI YA+ G +
Sbjct: 218 YIMTTLVDMYARFGCVD-----------YASYVFGGMPVRNVVSWSAMIACYAKNGKAFE 266
Query: 239 AVGLFREM--QVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNAL 296
A+ FREM + P+ +TMVSVL ACA L ALE GK + YI + + + + +AL
Sbjct: 267 ALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISAL 326
Query: 297 IDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDD 356
+ M+ +CG ++ +F +M +VSW S+I +HG G +A+ +F+EM+ G P
Sbjct: 327 VTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTP 386
Query: 357 VSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVR 416
V+F+ VL AC H LV++G+ F +M + GI P+IEHY CMVDLL RA + EA V+
Sbjct: 387 VTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQ 446
Query: 417 TMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQ 476
M EP +W S++ +C G ++L E S+ L EP + NYVLL++IYA+ + W++
Sbjct: 447 DMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDE 506
Query: 477 KTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGY 536
+V+++++ RG++K+PG +E+ +M FV+ D+ + +QI+ + ++ ++K GY
Sbjct: 507 VKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGY 566
Query: 537 VPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKF 596
+P T VL +++ E+KE + HSEKLA+AF L+NT G PIRI KNLR+CEDCH TKF
Sbjct: 567 IPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKF 626
Query: 597 ISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
ISK +EI+VRD NRFH FKNG+CSCGD+W
Sbjct: 627 ISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/522 (41%), Positives = 321/522 (61%), Gaps = 14/522 (2%)
Query: 108 FLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHG 167
FL+NTL + + Q L LY+ M GV P++FTYPFV+KA + L D G A+H
Sbjct: 75 FLWNTLFKGYVRN-QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHA 133
Query: 168 SVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMI 227
VVK+GF V ++ MY A +F+ D V W+A +
Sbjct: 134 HVVKYGFGCLGIVATELVMMYMKFGELSS-----------AEFLFESMQVKDLVAWNAFL 182
Query: 228 GGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIP 287
+ G+S+ A+ F +M V D T+VS+L+AC LG+LE+G+ + ++I
Sbjct: 183 AVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEID 242
Query: 288 KSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEM 347
++ + NA +DM KCG+ + A LF +M +VSW+++IVG AM+G EA++LF M
Sbjct: 243 CNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTM 302
Query: 348 VEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM--EGNFGIVPKIEHYGCMVDLLSRA 405
+G+ P+ V+F+GVLSAC H+ LV++G+ YF+ M + + P+ EHY CMVDLL R+
Sbjct: 303 QNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRS 362
Query: 406 GFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLS 465
G ++EA +F++ MPVEP+ IW +++ AC ++ LG+ ++ L+ P S +VLLS
Sbjct: 363 GLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLS 422
Query: 466 NIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVD 525
NIYA +W+ KVR M G KKV + +E ++ F GDKSH Q K IYE +D
Sbjct: 423 NIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLD 482
Query: 526 EMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLR 585
E+ ++I++ GYVP T V D++ E+KE +L HSEKLAIAF L+ PG PIR++KNLR
Sbjct: 483 EILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLR 542
Query: 586 VCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
C+DCH+ +KF+S + + EI++RD+NRFHHF+NG+CSC +FW
Sbjct: 543 TCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 76/159 (47%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A +VFDE K W+ + GY R ++ L+++M+ +GV PDE T V+ A +
Sbjct: 62 ARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQ 121
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSV 327
LG G L +++ + L+ M+ K G++ A LF M +V+W +
Sbjct: 122 LGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAF 181
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSAC 366
+ G + A+ F++M V+ D + + +LSAC
Sbjct: 182 LAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSAC 220
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 418 bits (1074), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/523 (40%), Positives = 321/523 (61%), Gaps = 18/523 (3%)
Query: 111 NTLIRAFAHTPQSKSSGLQLYRTMLRYGVVP-NKFTYPFVLKACAGLSDLRLGKAVHGSV 169
NT+IRAF+ Q+ G +L+R++ R +P N + F LK C DL G +HG +
Sbjct: 81 NTMIRAFS-LSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKI 139
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
GF D + T++ +Y A KVFDE PK D+V+W+ +
Sbjct: 140 FSDGFLSDSLLMTTLMDLYSTCENSTD-----------ACKVFDEIPKRDTVSWNVLFSC 188
Query: 230 YARRGHSSRAVGLFREMQ--VMG-VCPDEITMVSVLTACADLGALELGKWLESYIEWKKI 286
Y R + + LF +M+ V G V PD +T + L ACA+LGAL+ GK + +I+ +
Sbjct: 189 YLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGL 248
Query: 287 PKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDE 346
++ L N L+ M+++CG +DKA +F M +VSWT++I GLAM+G G EA+ F+E
Sbjct: 249 SGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNE 308
Query: 347 MVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSME-GNFGIVPKIEHYGCMVDLLSRA 405
M++ G+ P++ + G+LSAC HS LV +G +F+ M G F I P + HYGC+VDLL RA
Sbjct: 309 MLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRA 368
Query: 406 GFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLS 465
+ +A +++M ++P+ IWR+++ AC G+++LGE + L+ + +YVLL
Sbjct: 369 RLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLL 428
Query: 466 NIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVD 525
N Y+ + +WE+ T++R +M + + PG + IEL + EF+ D SH + ++IY+M+
Sbjct: 429 NTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLA 488
Query: 526 EMGREIKRAGYVPTTSQVLLDID-EEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNL 584
E+ +++K AGYV + L +++ EE+K AL HSEKLAIAF +L TPPGT IR+ KNL
Sbjct: 489 EINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNL 548
Query: 585 RVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
R C DCH+ KF+S VY+R ++VRDR+RFHHFK G CSC DFW
Sbjct: 549 RTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/544 (38%), Positives = 326/544 (59%), Gaps = 23/544 (4%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +N++I F S L+L++ M V + T VL ACA + +L G+ V
Sbjct: 196 DVVSWNSMINGFVQK-GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV 254
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXX--------------------XXXXXX 205
+ + + +L + N M+ MY
Sbjct: 255 CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDY 314
Query: 206 XLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVM-GVCPDEITMVSVLTA 264
A +V + P+ D V W+A+I Y + G + A+ +F E+Q+ + ++IT+VS L+A
Sbjct: 315 EAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSA 374
Query: 265 CADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSW 324
CA +GALELG+W+ SYI+ I + + +ALI M++KCGD++K+ +F ++ + W
Sbjct: 375 CAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVW 434
Query: 325 TSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEG 384
+++I GLAMHG G+EAV +F +M E V+P+ V+F V AC H+ LVD+ S F+ ME
Sbjct: 435 SAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMES 494
Query: 385 NFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGE 444
N+GIVP+ +HY C+VD+L R+G++++A+ F+ MP+ P+ +W +++ AC L L E
Sbjct: 495 NYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAE 554
Query: 445 SISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEM 504
LL EP ++ +VLLSNIYAKL +WE +++R+ M + G+KK PG + IE++ +
Sbjct: 555 MACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMI 614
Query: 505 CEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDIDEED-KEDALYKHSEKL 563
EF++GD +H +++Y + E+ ++K GY P SQVL I+EE+ KE +L HSEKL
Sbjct: 615 HEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKL 674
Query: 564 AIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSC 623
AI + L++T IR++KNLRVC DCHS K IS++Y+REI+VRDR RFHHF+NG CSC
Sbjct: 675 AICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSC 734
Query: 624 GDFW 627
DFW
Sbjct: 735 NDFW 738
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 127/274 (46%), Gaps = 12/274 (4%)
Query: 159 LRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKT 218
LR K HG +++ G D + + + M A KVFDE PK
Sbjct: 43 LRQLKQTHGHMIRTGTFSDPYSASKLFAM---------AALSSFASLEYARKVFDEIPKP 93
Query: 219 DSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVC-PDEITMVSVLTACADLGALELGKWL 277
+S W+ +I YA ++ F +M C P++ T ++ A A++ +L LG+ L
Sbjct: 94 NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153
Query: 278 ESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRG 337
+ V + N+LI + CGD+D A +F + +VSW S+I G G
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213
Query: 338 SEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGC 397
+A+ LF +M + V+ V+ +GVLSAC + ++ GR + +E N + +
Sbjct: 214 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEEN-RVNVNLTLANA 272
Query: 398 MVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSII 431
M+D+ ++ G +++A M E + + W +++
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTML 305
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/522 (39%), Positives = 304/522 (58%), Gaps = 15/522 (2%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +N +I + +++ S L L++ ++ G T ++ L L A+
Sbjct: 286 DIVAYNAMIHGYTSNGETELS-LSLFKELMLSGARLRSSTLVSLVPVSG---HLMLIYAI 341
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
HG +K F V + +Y A K+FDESP+ +W+A
Sbjct: 342 HGYCLKSNFLSHASVSTALTTVYSKLNEIES-----------ARKLFDESPEKSLPSWNA 390
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
MI GY + G + A+ LFREMQ P+ +T+ +L+ACA LGAL LGKW+ +
Sbjct: 391 MISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTD 450
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
S+ + ALI M+AKCG + +A LF M V+W ++I G +HG+G EA+++F
Sbjct: 451 FESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFY 510
Query: 346 EMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRA 405
EM+ G+ P V+F+ VL AC H+ LV +G FNSM +G P ++HY CMVD+L RA
Sbjct: 511 EMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRA 570
Query: 406 GFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLS 465
G ++ AL F+ M +EP +W +++ AC + L ++S++L +P + +VLLS
Sbjct: 571 GHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLS 630
Query: 466 NIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVD 525
NI++ R + Q VR+ R + K PG T+IE+ F +GD+SH Q K+IYE ++
Sbjct: 631 NIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLE 690
Query: 526 EMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLR 585
++ +++ AGY P T L D++EE++E + HSE+LAIAF L+ T PGT IRI+KNLR
Sbjct: 691 KLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLR 750
Query: 586 VCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
VC DCH+ TK ISK+ R IVVRD NRFHHFK+G+CSCGD+W
Sbjct: 751 VCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 202/472 (42%), Gaps = 61/472 (12%)
Query: 63 GLINNPLVLTKFAATSSTFNAIHYATS-FLFSDDPTTAPRASSFDAFLFNTLIRAFAHTP 121
G N+ +LTK S AI+YA FL P D FLFN L+R F+
Sbjct: 47 GFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRP---------DVFLFNVLMRGFS-VN 96
Query: 122 QSKSSGLQLYRTMLR-YGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHV 180
+S S L ++ + + + PN TY F + A +G D R G+ +HG V G D +L +
Sbjct: 97 ESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLL 156
Query: 181 QNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAV 240
+ ++ MY A KVFD P+ D++ W+ MI GY + ++
Sbjct: 157 GSNIVKMYFKFWRVED-----------ARKVFDRMPEKDTILWNTMISGYRKNEMYVESI 205
Query: 241 GLFREMQVMGVCP--DEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALID 298
+FR++ + C D T++ +L A A+L L LG + S + I
Sbjct: 206 QVFRDL-INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFIS 264
Query: 299 MFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVS 358
+++KCG + LFR+ IV++ ++I G +G ++SLF E++ G +
Sbjct: 265 LYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSST 324
Query: 359 FIGVLSACCHSKLVDKGRSY----------------------FNSMEGN---FGIVPK-- 391
+ ++ H L+ Y N +E F P+
Sbjct: 325 LVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKS 384
Query: 392 IEHYGCMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRSIITACHARGELKLGESISK 448
+ + M+ ++ G ++A+ R M PN + I++AC G L LG+ +
Sbjct: 385 LPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWV-H 443
Query: 449 ELLRNEPTHESNYV--LLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMI 498
+L+R+ S YV L +YAK + ++ ++M + +V +TMI
Sbjct: 444 DLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKK--NEVTWNTMI 493
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 411 bits (1057), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 312/522 (59%), Gaps = 21/522 (4%)
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIH 186
L ++ M+ GV P++ + + +C+ L ++ GK+ HG V++ GF+ ++ N +I
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380
Query: 187 MYXXXXXX---------XXXXXXXXXXXXLAGKV-----------FDESPKTDSVTWSAM 226
MY +AG V F+ P+ + V+W+ +
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 227 IGGYARRGHSSRAVGLFREMQVM-GVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
I G + A+ +F MQ GV D +TM+S+ +AC LGAL+L KW+ YIE
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
I V L L+DMF++CGD + AM++F + + + +WT+ I +AM G A+ LFD
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560
Query: 346 EMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRA 405
+M+EQG++PD V+F+G L+AC H LV +G+ F SM G+ P+ HYGCMVDLL RA
Sbjct: 561 DMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRA 620
Query: 406 GFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLS 465
G ++EA+ + MP+EPN +IW S++ AC +G +++ ++++ P +YVLLS
Sbjct: 621 GLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLS 680
Query: 466 NIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVD 525
N+YA RW KVR M +G++K PG++ I++ + EF +GD+SH + I M+D
Sbjct: 681 NVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLD 740
Query: 526 EMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLR 585
E+ + G+VP S VL+D+DE++K L +HSEKLA+A+ L+++ GT IRIVKNLR
Sbjct: 741 EVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLR 800
Query: 586 VCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
VC DCHS KF SKVYNREI++RD NRFH+ + G CSCGDFW
Sbjct: 801 VCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 194/405 (47%), Gaps = 54/405 (13%)
Query: 63 GLINNPLVLTKFAATS---STFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAH 119
GL N+ +TK A S T ++ +A +F + + F++N+LIR +A
Sbjct: 59 GLDNDVSTITKLVARSCELGTRESLSFAKE-VFENSESYGT------CFMYNSLIRGYAS 111
Query: 120 TPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLH 179
+ + L L+ M+ G+ P+K+T+PF L ACA G +HG +VK G+ DL
Sbjct: 112 SGLCNEAIL-LFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLF 170
Query: 180 VQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRA 239
VQN+++H Y A KVFDE + + V+W++MI GYARR + A
Sbjct: 171 VQNSLVHFYAECGELDS-----------ARKVFDEMSERNVVSWTSMICGYARRDFAKDA 219
Query: 240 VGL-FREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALID 298
V L FR ++ V P+ +TMV V++ACA L LE G+ + ++I I + + +AL+D
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVD 279
Query: 299 MFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVS 358
M+ KC +D A LF + + + ++ G EA+ +F+ M++ GV PD +S
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 359 FIGVLSAC-----------CHSKLVDKGRSYFNSM--------------EGNFGIVPKIE 393
+ +S+C CH ++ G ++++ + F I ++
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 394 H-----YGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITA 433
+ + +V G V A + TMP E N + W +II+
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMP-EKNIVSWNTIISG 443
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 154/342 (45%), Gaps = 46/342 (13%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+ ++I +A +K + +R + V PN T V+ ACA L DL G+ V+ +
Sbjct: 203 WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI 262
Query: 170 VKFGFD-DDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIG 228
G + +DL V + ++ MY +A ++FDE ++ +AM
Sbjct: 263 RNSGIEVNDLMV-SALVDMYMKCNAID-----------VAKRLFDEYGASNLDLCNAMAS 310
Query: 229 GYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPK 288
Y R+G + A+G+F M GV PD I+M+S +++C+ L + GK Y+
Sbjct: 311 NYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFES 370
Query: 289 SVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGR------------ 336
+CNALIDM+ KC D A +F +M + T+V+W S++ G +G
Sbjct: 371 WDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMP 430
Query: 337 ------------GSEAVSLFDEMVE--------QGVEPDDVSFIGVLSACCHSKLVDKGR 376
G SLF+E +E +GV D V+ + + SAC H +D +
Sbjct: 431 EKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAK 490
Query: 377 SYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTM 418
+ +E N GI + +VD+ SR G + A+ ++
Sbjct: 491 WIYYYIEKN-GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 160/374 (42%), Gaps = 47/374 (12%)
Query: 147 PFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXX 206
P LK C + +L++ H S+ K G D+D+ ++
Sbjct: 36 PSSLKNCKTIDELKM---FHRSLTKQGLDNDVSTITKLV--------ARSCELGTRESLS 84
Query: 207 LAGKVFDESPKTDSV-TWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTAC 265
A +VF+ S + ++++I GYA G + A+ LF M G+ PD+ T L+AC
Sbjct: 85 FAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSAC 144
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
A A G + I K + + N+L+ +A+CG++D A +F +M +VSWT
Sbjct: 145 AKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWT 204
Query: 326 SVIVGLAMHGRGSEAVSLFDEMV-EQGVEPDDVSFIGVLSACCHSKLVDKGRSYF----- 379
S+I G A +AV LF MV ++ V P+ V+ + V+SAC + ++ G +
Sbjct: 205 SMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN 264
Query: 380 NSMEGNFGIVPKI-----------------EHYG--------CMVDLLSRAGFVKEALDF 414
+ +E N +V + + YG M R G +EAL
Sbjct: 265 SGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGV 324
Query: 415 VRTM---PVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYV-LLSNIYAK 470
M V P++I S I++C + G+S +LRN N L ++Y K
Sbjct: 325 FNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMK 384
Query: 471 LRRWEQKTKVREMM 484
R + ++ + M
Sbjct: 385 CHRQDTAFRIFDRM 398
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 407 bits (1046), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/524 (38%), Positives = 321/524 (61%), Gaps = 14/524 (2%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +N++I+A+ Q + + L++ M + P+ T + + L D+R ++V
Sbjct: 312 DLISWNSIIKAYELNEQPLRA-ISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSV 370
Query: 166 HGSVVKFG-FDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWS 224
G ++ G F +D+ + N ++ MY A VF+ P TD ++W+
Sbjct: 371 QGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS-----------ARAVFNWLPNTDVISWN 419
Query: 225 AMIGGYARRGHSSRAVGLFREMQVMG-VCPDEITMVSVLTACADLGALELGKWLESYIEW 283
+I GYA+ G +S A+ ++ M+ G + ++ T VSVL AC+ GAL G L +
Sbjct: 420 TIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLK 479
Query: 284 KKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSL 343
+ V + +L DM+ KCG ++ A++LF Q+ V W ++I HG G +AV L
Sbjct: 480 NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVML 539
Query: 344 FDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLS 403
F EM+++GV+PD ++F+ +LSAC HS LVD+G+ F M+ ++GI P ++HYGCMVD+
Sbjct: 540 FKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYG 599
Query: 404 RAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVL 463
RAG ++ AL F+++M ++P+ IW ++++AC G + LG+ S+ L EP H +VL
Sbjct: 600 RAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVL 659
Query: 464 LSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEM 523
LSN+YA +WE ++R + +G++K PG + +E++N++ F G+++H Y+++Y
Sbjct: 660 LSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRE 719
Query: 524 VDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKN 583
+ + ++K GYVP VL D+++++KE L HSE+LAIAFAL+ TP T IRI KN
Sbjct: 720 LTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKN 779
Query: 584 LRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
LRVC DCHS TKFISK+ REI+VRD NRFHHFKNG+CSCGD+W
Sbjct: 780 LRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 187/434 (43%), Gaps = 66/434 (15%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D + +N +I + S ML G+ P+ T+P VLKAC + D G +
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKI 172
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H +KFGF D++V ++IH+Y A +FDE P D +W+A
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGN-----------ARILFDEMPVRDMGSWNA 221
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
MI GY + G++ A+ L ++ M D +T+VS+L+AC + G G + SY
Sbjct: 222 MISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG 277
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
+ + + N LID++A+ G + +F +M ++SW S+I ++ + A+SLF
Sbjct: 278 LESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQ 337
Query: 346 EMVEQGVEPDDVSFIGVLSA--------CCHS---------------------------- 369
EM ++PD ++ I + S C S
Sbjct: 338 EMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKL 397
Query: 370 KLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVE----PNQI 425
LVD R+ FN + + + ++ ++ GF EA++ M E NQ
Sbjct: 398 GLVDSARAVFNWLPNT-----DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQG 452
Query: 426 IWRSIITACHARGELKLGESISKELLRNEPTHESNYVL-LSNIYAKLRRWEQKTKVREMM 484
W S++ AC G L+ G + LL+N + V L+++Y K R E +
Sbjct: 453 TWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSL--FY 510
Query: 485 DMRGMKKVPGSTMI 498
+ + VP +T+I
Sbjct: 511 QIPRVNSVPWNTLI 524
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 103/236 (43%), Gaps = 26/236 (11%)
Query: 207 LAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFRE-MQVMGVCPDEITMVSVLTAC 265
LA FD D W+ MI GY R G+SS + F M G+ PD T SVL AC
Sbjct: 104 LARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC 163
Query: 266 ADL--------GALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD 317
+ AL+ G + Y+ +LI ++++ V A LF +M
Sbjct: 164 RTVIDGNKIHCLALKFGFMWDVYV-----------AASLIHLYSRYKAVGNARILFDEMP 212
Query: 318 SCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRS 377
+ SW ++I G G EA++L + + D V+ + +LSAC + ++G +
Sbjct: 213 VRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVT 268
Query: 378 YFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITA 433
+S G+ ++ ++DL + G +++ M V + I W SII A
Sbjct: 269 -IHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR-DLISWNSIIKA 322
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 407 bits (1045), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/534 (37%), Positives = 310/534 (58%), Gaps = 12/534 (2%)
Query: 94 DDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKAC 153
+D R D+ + +I+ A +K + ++ +R M G+ +++ + VL AC
Sbjct: 222 EDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEA-IECFREMKVQGLKMDQYPFGSVLPAC 280
Query: 154 AGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFD 213
GL + GK +H +++ F D ++V + +I MY A VFD
Sbjct: 281 GGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLH-----------YAKTVFD 329
Query: 214 ESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALEL 273
+ + V+W+AM+ GY + G + AV +F +MQ G+ PD T+ ++ACA++ +LE
Sbjct: 330 RMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEE 389
Query: 274 GKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAM 333
G + V + N+L+ ++ KCGD+D + LF +M+ VSWT+++ A
Sbjct: 390 GSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQ 449
Query: 334 HGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIE 393
GR E + LFD+MV+ G++PD V+ GV+SAC + LV+KG+ YF M +GIVP I
Sbjct: 450 FGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIG 509
Query: 394 HYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRN 453
HY CM+DL SR+G ++EA+ F+ MP P+ I W ++++AC +G L++G+ ++ L+
Sbjct: 510 HYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIEL 569
Query: 454 EPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKS 513
+P H + Y LLS+IYA +W+ ++R M + +KK PG + I+ ++ F A D+S
Sbjct: 570 DPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDES 629
Query: 514 HDQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTP 573
QIY ++E+ +I GY P TS V D++E K L HSE+LAIAF L+ P
Sbjct: 630 SPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVP 689
Query: 574 PGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
G PIR+ KNLRVC DCH+ATK IS V REI+VRD RFH FK+G CSCGDFW
Sbjct: 690 SGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 178/370 (48%), Gaps = 23/370 (6%)
Query: 84 IHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLR-YGVVPN 142
+ Y+ + L S+ +T + D +N LI ++ + ++ ++ Y TM+R +
Sbjct: 80 LAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAA-VKAYNTMMRDFSANLT 138
Query: 143 KFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXX---------- 192
+ T +LK + + LGK +HG V+K GF+ L V + +++MY
Sbjct: 139 RVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFY 198
Query: 193 ---XXXXXXXXXXXXXXLAGKVFDESPK------TDSVTWSAMIGGYARRGHSSRAVGLF 243
LA + +++ + DSV+W+AMI G A+ G + A+ F
Sbjct: 199 GLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECF 258
Query: 244 REMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKC 303
REM+V G+ D+ SVL AC LGA+ GK + + I + + +ALIDM+ KC
Sbjct: 259 REMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC 318
Query: 304 GDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVL 363
+ A +F +M +VSWT+++VG GR EAV +F +M G++PD + +
Sbjct: 319 KCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAI 378
Query: 364 SACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPN 423
SAC + +++G S F+ G++ + +V L + G + ++ M V +
Sbjct: 379 SACANVSSLEEG-SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-D 436
Query: 424 QIIWRSIITA 433
+ W ++++A
Sbjct: 437 AVSWTAMVSA 446
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 167/435 (38%), Gaps = 98/435 (22%)
Query: 146 YPFVLKACAGL---SDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXX---- 198
Y +K C GL + R K +HG++++ + + N ++H Y
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFD 65
Query: 199 ----------XXXXXXXXLAGKV------FDESPKTDSVTWSAMIGGYARRGHSSRAVGL 242
AG + F++ P D VTW+ +I GY+ G AV
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA 125
Query: 243 FREM-QVMGVCPDEITMVSVLTACADLGALELGKWL---------ESYI----------- 281
+ M + +T++++L + G + LGK + ESY+
Sbjct: 126 YNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185
Query: 282 ------EWKKI-----PKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVG 330
+ KK+ ++ + N+L+ CG ++ A+ LFR M+ + VSW ++I G
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDS-VSWAAMIKG 244
Query: 331 LAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRS------------- 377
LA +G EA+ F EM QG++ D F VL AC +++G+
Sbjct: 245 LAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDH 304
Query: 378 -YFNSMEGNFGIVPKIEHYG----------------CMVDLLSRAGFVKEA----LDFVR 416
Y S + K HY MV + G +EA LD R
Sbjct: 305 IYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR 364
Query: 417 TMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSN----IYAKLR 472
+ ++P+ I+AC L+ G + + + H YV +SN +Y K
Sbjct: 365 S-GIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIH---YVTVSNSLVTLYGKCG 420
Query: 473 RWEQKTKVREMMDMR 487
+ T++ M++R
Sbjct: 421 DIDDSTRLFNEMNVR 435
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/521 (39%), Positives = 311/521 (59%), Gaps = 21/521 (4%)
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIH 186
L ++ M+ GV P++ + + +C+ L ++ GK+ HG V++ GF+ ++ N +I
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380
Query: 187 MYXXXXXX---------XXXXXXXXXXXXLAGKV-----------FDESPKTDSVTWSAM 226
MY +AG V F+ P+ + V+W+ +
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 227 IGGYARRGHSSRAVGLFREMQVM-GVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
I G + A+ +F MQ GV D +TM+S+ +AC LGAL+L KW+ YIE
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
I V L L+DMF++CGD + AM++F + + + +WT+ I +AM G A+ LFD
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560
Query: 346 EMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRA 405
+M+EQG++PD V+F+G L+AC H LV +G+ F SM G+ P+ HYGCMVDLL RA
Sbjct: 561 DMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRA 620
Query: 406 GFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLS 465
G ++EA+ + MP+EPN +IW S++ AC +G +++ ++++ P +YVLLS
Sbjct: 621 GLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLS 680
Query: 466 NIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVD 525
N+YA RW KVR M +G++K PG++ I++ + EF +GD+SH + I M+D
Sbjct: 681 NVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLD 740
Query: 526 EMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLR 585
E+ + G+VP S VL+D+DE++K L +HSEKLA+A+ L+++ GT IRIVKNLR
Sbjct: 741 EVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLR 800
Query: 586 VCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDF 626
VC DCHS KF SKVYNREI++RD NRFH+ + G CSCGDF
Sbjct: 801 VCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 193/405 (47%), Gaps = 54/405 (13%)
Query: 63 GLINNPLVLTKFAATS---STFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAH 119
GL N+ +TK A S T ++ +A + + S F++N+LIR +A
Sbjct: 59 GLDNDVSTITKLVARSCELGTRESLSFAKEVFENSE-------SYGTCFMYNSLIRGYAS 111
Query: 120 TPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLH 179
+ + L L+ M+ G+ P+K+T+PF L ACA G +HG +VK G+ DL
Sbjct: 112 SGLCNEAIL-LFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLF 170
Query: 180 VQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRA 239
VQN+++H Y A KVFDE + + V+W++MI GYARR + A
Sbjct: 171 VQNSLVHFYAECGELDS-----------ARKVFDEMSERNVVSWTSMICGYARRDFAKDA 219
Query: 240 VGL-FREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALID 298
V L FR ++ V P+ +TMV V++ACA L LE G+ + ++I I + + +AL+D
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVD 279
Query: 299 MFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVS 358
M+ KC +D A LF + + + ++ G EA+ +F+ M++ GV PD +S
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 359 FIGVLSAC-----------CHSKLVDKGRSYFNSM--------------EGNFGIVPKIE 393
+ +S+C CH ++ G ++++ + F I ++
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 394 H-----YGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITA 433
+ + +V G V A + TMP E N + W +II+
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMP-EKNIVSWNTIISG 443
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 154/342 (45%), Gaps = 46/342 (13%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+ ++I +A +K + +R + V PN T V+ ACA L DL G+ V+ +
Sbjct: 203 WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI 262
Query: 170 VKFGFD-DDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIG 228
G + +DL V + ++ MY +A ++FDE ++ +AM
Sbjct: 263 RNSGIEVNDLMV-SALVDMYMKCNAID-----------VAKRLFDEYGASNLDLCNAMAS 310
Query: 229 GYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPK 288
Y R+G + A+G+F M GV PD I+M+S +++C+ L + GK Y+
Sbjct: 311 NYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFES 370
Query: 289 SVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGR------------ 336
+CNALIDM+ KC D A +F +M + T+V+W S++ G +G
Sbjct: 371 WDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMP 430
Query: 337 ------------GSEAVSLFDEMVE--------QGVEPDDVSFIGVLSACCHSKLVDKGR 376
G SLF+E +E +GV D V+ + + SAC H +D +
Sbjct: 431 EKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAK 490
Query: 377 SYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTM 418
+ +E N GI + +VD+ SR G + A+ ++
Sbjct: 491 WIYYYIEKN-GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 160/374 (42%), Gaps = 47/374 (12%)
Query: 147 PFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXX 206
P LK C + +L++ H S+ K G D+D+ ++
Sbjct: 36 PSSLKNCKTIDELKM---FHRSLTKQGLDNDVSTITKLV--------ARSCELGTRESLS 84
Query: 207 LAGKVFDESPKTDSV-TWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTAC 265
A +VF+ S + ++++I GYA G + A+ LF M G+ PD+ T L+AC
Sbjct: 85 FAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSAC 144
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
A A G + I K + + N+L+ +A+CG++D A +F +M +VSWT
Sbjct: 145 AKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWT 204
Query: 326 SVIVGLAMHGRGSEAVSLFDEMV-EQGVEPDDVSFIGVLSACCHSKLVDKGRSYF----N 380
S+I G A +AV LF MV ++ V P+ V+ + V+SAC + ++ G + N
Sbjct: 205 SMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN 264
Query: 381 S----------------MEGNFGIVPK--IEHYG--------CMVDLLSRAGFVKEALDF 414
S M+ N V K + YG M R G +EAL
Sbjct: 265 SGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGV 324
Query: 415 VRTM---PVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYV-LLSNIYAK 470
M V P++I S I++C + G+S +LRN N L ++Y K
Sbjct: 325 FNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMK 384
Query: 471 LRRWEQKTKVREMM 484
R + ++ + M
Sbjct: 385 CHRQDTAFRIFDRM 398
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/569 (38%), Positives = 331/569 (58%), Gaps = 39/569 (6%)
Query: 70 VLTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQ 129
+LTK + + AI Y T LF P D FLFN++I++ +S L+
Sbjct: 43 LLTKLITLACSARAIAY-THLLFLSVPLP-------DDFLFNSVIKS--------TSKLR 86
Query: 130 L-------YRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQN 182
L YR ML V P+ +T+ V+K+CA LS LR+GK VH V GF D +VQ
Sbjct: 87 LPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQA 146
Query: 183 TMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGL 242
++ Y A +VFD P+ V W++++ G+ + G + A+ +
Sbjct: 147 ALVTFYSKCGDMEG-----------ARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQV 195
Query: 243 FREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAK 302
F +M+ G PD T VS+L+ACA GA+ LG W+ YI + + +V+L ALI+++++
Sbjct: 196 FYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSR 255
Query: 303 CGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQ-GVEPDDVSFIG 361
CGDV KA +F +M + +WT++I HG G +AV LF++M + G P++V+F+
Sbjct: 256 CGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVA 315
Query: 362 VLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVE 421
VLSAC H+ LV++GRS + M ++ ++P +EH+ CMVD+L RAGF+ EA F+ +
Sbjct: 316 VLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDAT 375
Query: 422 PNQI---IWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKT 478
+W +++ AC LG I+K L+ EP + ++V+LSNIYA + ++ +
Sbjct: 376 GKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVS 435
Query: 479 KVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVP 538
+R+ M ++K G ++IE+ N+ F GD+SH + +IY ++ + K GY P
Sbjct: 436 HIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAP 495
Query: 539 TTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFIS 598
+ +V+ ++EE+KE AL HSEKLA+AF LL T I IVKNLR+CEDCHSA K+IS
Sbjct: 496 VSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNLRICEDCHSAFKYIS 554
Query: 599 KVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
V NR+I VRD+ RFHHF+NG CSC D+W
Sbjct: 555 IVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/531 (39%), Positives = 313/531 (58%), Gaps = 23/531 (4%)
Query: 109 LFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGS 168
L+N +I ++ K + L G++ N T V+ AC +A+HG
Sbjct: 371 LWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGF 430
Query: 169 VVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIG 228
VVK G D D VQNT++ MY +A ++F + D VTW+ MI
Sbjct: 431 VVKRGLDRDRFVQNTLMDMYSRLGKID-----------IAMRIFGKMEDRDLVTWNTMIT 479
Query: 229 GYARRGHSSRAVGLFREMQVM-----------GVCPDEITMVSVLTACADLGALELGKWL 277
GY H A+ L +MQ + + P+ IT++++L +CA L AL GK +
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 539
Query: 278 ESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRG 337
+Y + V + +AL+DM+AKCG + + +F Q+ +++W +I+ MHG G
Sbjct: 540 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNG 599
Query: 338 SEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGC 397
EA+ L M+ QGV+P++V+FI V +AC HS +VD+G F M+ ++G+ P +HY C
Sbjct: 600 QEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC 659
Query: 398 MVDLLSRAGFVKEALDFVRTMPVEPNQI-IWRSIITACHARGELKLGESISKELLRNEPT 456
+VDLL RAG +KEA + MP + N+ W S++ A L++GE ++ L++ EP
Sbjct: 660 VVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPN 719
Query: 457 HESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQ 516
S+YVLL+NIY+ W++ T+VR M +G++K PG + IE +E+ +FVAGD SH Q
Sbjct: 720 VASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQ 779
Query: 517 YKQIYEMVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGT 576
+++ ++ + +++ GYVP TS VL +++E++KE L HSEKLAIAF +LNT PGT
Sbjct: 780 SEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGT 839
Query: 577 PIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
IR+ KNLRVC DCH ATKFISK+ +REI++RD RFH FKNG CSCGD+W
Sbjct: 840 IIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 125/250 (50%), Gaps = 16/250 (6%)
Query: 131 YRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFD-DDLHVQNTMIHMYX 189
Y M+ G+ P+ + +P +LKA A L D+ LGK +H V KFG+ D + V NT++++Y
Sbjct: 85 YVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYR 144
Query: 190 XXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVM 249
KVFD + + V+W+++I A+ FR M
Sbjct: 145 KCGDFGAVY-----------KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDE 193
Query: 250 GVCPDEITMVSVLTACADLG---ALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDV 306
V P T+VSV+TAC++L L +GK + +Y +K + + N L+ M+ K G +
Sbjct: 194 NVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAY-GLRKGELNSFIINTLVAMYGKLGKL 252
Query: 307 DKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSAC 366
+ L +V+W +V+ L + + EA+ EMV +GVEPD+ + VL AC
Sbjct: 253 ASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPAC 312
Query: 367 CHSKLVDKGR 376
H +++ G+
Sbjct: 313 SHLEMLRTGK 322
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 155/347 (44%), Gaps = 38/347 (10%)
Query: 101 RASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGL---S 157
R S + +N+LI + + + L+ +R ML V P+ FT V+ AC+ L
Sbjct: 158 RISERNQVSWNSLISSLC-SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPE 216
Query: 158 DLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDES-P 216
L +GK VH ++ G + + + NT++ MY + KV S
Sbjct: 217 GLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLA------------SSKVLLGSFG 263
Query: 217 KTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKW 276
D VTW+ ++ + A+ REM + GV PDE T+ SVL AC+ L L GK
Sbjct: 264 GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKE 323
Query: 277 LESY-IEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHG 335
L +Y ++ + ++ + +AL+DM+ C V +F M I W ++I G + +
Sbjct: 324 LHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNE 383
Query: 336 RGSEAVSLFDEMVEQ-GVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPK--- 391
EA+ LF M E G+ + + GV+ AC S F+ E G V K
Sbjct: 384 HDKEALLLFIGMEESAGLLANSTTMAGVVPACVRS-------GAFSRKEAIHGFVVKRGL 436
Query: 392 -----IEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITA 433
+++ ++D+ SR G + A+ M + + + W ++IT
Sbjct: 437 DRDRFVQN--TLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITG 480
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 125/276 (45%), Gaps = 36/276 (13%)
Query: 223 WSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYI- 281
W ++ R AV + +M V+G+ PD ++L A ADL +ELGK + +++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 282 EWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAV 341
++ SV + N L++++ KCGD +F ++ VSW S+I L + A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 342 SLFDEMVEQGVEPDDVSFIGVLSAC--------------CHSKLVDKGRS---YFNSMEG 384
F M+++ VEP + + V++AC H+ + KG N++
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244
Query: 385 NFGIVPKIEH---------------YGCMVDLLSRAGFVKEALDFVRTM---PVEPNQII 426
+G + K+ + ++ L + + EAL+++R M VEP++
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 427 WRSIITACHARGELKLGESISKELLRNEPTHESNYV 462
S++ AC L+ G+ + L+N E+++V
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 340
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/542 (36%), Positives = 313/542 (57%), Gaps = 25/542 (4%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+N ++ F + K + + +++ + G P++ T VL + L +G+ +HG V
Sbjct: 220 WNGILSGFNRSGYHKEA-VVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYV 278
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVF----------------- 212
+K G D V + MI MY + V
Sbjct: 279 IKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKAL 338
Query: 213 -------DESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTAC 265
+++ + + V+W+++I G A+ G A+ LFREMQV GV P+ +T+ S+L AC
Sbjct: 339 EMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPAC 398
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
++ AL G+ + + +V + +ALIDM+AKCG ++ + +F M + +V W
Sbjct: 399 GNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWN 458
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
S++ G +MHG+ E +S+F+ ++ ++PD +SF +LSAC L D+G YF M
Sbjct: 459 SLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEE 518
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGES 445
+GI P++EHY CMV+LL RAG ++EA D ++ MP EP+ +W +++ +C + + L E
Sbjct: 519 YGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEI 578
Query: 446 ISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMC 505
+++L EP + YVLLSNIYA W + +R M+ G+KK PG + I++ N +
Sbjct: 579 AAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVY 638
Query: 506 EFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAI 565
+AGDKSH Q QI E +DE+ +E++++G+ P L D++E+++E L+ HSEKLA+
Sbjct: 639 TLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAV 698
Query: 566 AFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGD 625
F LLNTP GTP++++KNLR+C DCH+ KFIS REI +RD NRFHHFK+G+CSCGD
Sbjct: 699 VFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGD 758
Query: 626 FW 627
FW
Sbjct: 759 FW 760
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 191/461 (41%), Gaps = 94/461 (20%)
Query: 63 GLINNPLVLTKFAATSSTFNAIHYATSFLFS-DDPTTAPRASSFDAFLFNTLIRAFAHTP 121
G N+ + K A+ S +N + A L S DPT + F++LI A
Sbjct: 45 GAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTI---------YSFSSLIYALTKAK 95
Query: 122 QSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQ 181
S + ++ M +G++P+ P + K CA LS ++GK +H G D D VQ
Sbjct: 96 LFTQS-IGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154
Query: 182 NTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVT------------------- 222
+M HMY A KVFD D VT
Sbjct: 155 GSMFHMYMRCGRMGD-----------ARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVR 203
Query: 223 ----------------WSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACA 266
W+ ++ G+ R G+ AV +F+++ +G CPD++T+ SVL +
Sbjct: 204 ILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVG 263
Query: 267 DLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGD--------------------- 305
D L +G+ + Y+ + + K + +A+IDM+ K G
Sbjct: 264 DSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNA 323
Query: 306 ----------VDKAMNLF----RQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQG 351
VDKA+ +F Q +VSWTS+I G A +G+ EA+ LF EM G
Sbjct: 324 YITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAG 383
Query: 352 VEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEA 411
V+P+ V+ +L AC + + GRS + ++ + ++D+ ++ G + +
Sbjct: 384 VKPNHVTIPSMLPACGNIAALGHGRST-HGFAVRVHLLDNVHVGSALIDMYAKCGRINLS 442
Query: 412 LDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLR 452
MP + N + W S++ G+ K SI + L+R
Sbjct: 443 QIVFNMMPTK-NLVCWNSLMNGFSMHGKAKEVMSIFESLMR 482
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/518 (38%), Positives = 315/518 (60%), Gaps = 13/518 (2%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+ ++ A+A + + L+++ M + V P+ VL A L DL+ G+++H SV
Sbjct: 190 WTAIVSAYAQNGEPMEA-LEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASV 248
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
VK G + + + ++ MY A +FD+ + + W+AMI G
Sbjct: 249 VKMGLEIEPDLLISLNTMYAKCGQVAT-----------AKILFDKMKSPNLILWNAMISG 297
Query: 230 YARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKS 289
YA+ G++ A+ +F EM V PD I++ S ++ACA +G+LE + + Y+
Sbjct: 298 YAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDD 357
Query: 290 VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVE 349
V + +ALIDMFAKCG V+ A +F + +V W+++IVG +HGR EA+SL+ M
Sbjct: 358 VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER 417
Query: 350 QGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVK 409
GV P+DV+F+G+L AC HS +V +G +FN M + I P+ +HY C++DLL RAG +
Sbjct: 418 GGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLD 476
Query: 410 EALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYA 469
+A + ++ MPV+P +W ++++AC ++LGE +++L +P++ +YV LSN+YA
Sbjct: 477 QAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYA 536
Query: 470 KLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGR 529
R W++ +VR M +G+ K G + +E+ + F GDKSH +Y++I V+ +
Sbjct: 537 AARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIES 596
Query: 530 EIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCED 589
+K G+V L D+++E+ E+ L HSE++AIA+ L++TP GTP+RI KNLR C +
Sbjct: 597 RLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVN 656
Query: 590 CHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
CH+ATK ISK+ +REIVVRD NRFHHFK+G+CSCGD+W
Sbjct: 657 CHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 197/393 (50%), Gaps = 26/393 (6%)
Query: 63 GLINNPLVLTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQ 122
GL + ++TK SS+F I +A +F D P F +N +IR ++
Sbjct: 48 GLQFSGFLITKLIHASSSFGDITFARQ-VFDDLPRP-------QIFPWNAIIRGYSRNNH 99
Query: 123 SKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQN 182
+ + L +Y M V P+ FT+P +LKAC+GLS L++G+ VH V + GFD D+ VQN
Sbjct: 100 FQDA-LLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158
Query: 183 TMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDS--VTWSAMIGGYARRGHSSRAV 240
+I +Y A VF+ P + V+W+A++ YA+ G A+
Sbjct: 159 GLIALYAKCRRLGS-----------ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEAL 207
Query: 241 GLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMF 300
+F +M+ M V PD + +VSVL A L L+ G+ + + + + +L +L M+
Sbjct: 208 EIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMY 267
Query: 301 AKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFI 360
AKCG V A LF +M S ++ W ++I G A +G EA+ +F EM+ + V PD +S
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 361 GVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEA-LDFVRTMP 419
+SAC +++ RS + + G + ++D+ ++ G V+ A L F RT+
Sbjct: 328 SAISACAQVGSLEQARSMYEYV-GRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL- 385
Query: 420 VEPNQIIWRSIITACHARGELKLGESISKELLR 452
+ + ++W ++I G + S+ + + R
Sbjct: 386 -DRDVVVWSAMIVGYGLHGRAREAISLYRAMER 417
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/515 (40%), Positives = 303/515 (58%), Gaps = 27/515 (5%)
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKF-------GFDDDLH 179
L + R ML G+ PN+ T VL CA + L GK +H +K+ G D+
Sbjct: 349 ALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENM 408
Query: 180 VQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDE-SPKT-DSVTWSAMIGGYARRGHSS 237
V N +I MY A +FD SPK D VTW+ MIGGY++ G ++
Sbjct: 409 VINQLIDMYAKCKKVDT-----------ARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN 457
Query: 238 RAVGLFREM--QVMGVCPDEITMVSVLTACADLGALELGKWLESYI---EWKKIPKSVEL 292
+A+ L EM + P+ T+ L ACA L AL +GK + +Y + +P V
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS- 516
Query: 293 CNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGV 352
N LIDM+AKCG + A +F M + V+WTS++ G MHG G EA+ +FDEM G
Sbjct: 517 -NCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGF 575
Query: 353 EPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEAL 412
+ D V+ + VL AC HS ++D+G YFN M+ FG+ P EHY C+VDLL RAG + AL
Sbjct: 576 KLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAAL 635
Query: 413 DFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLR 472
+ MP+EP ++W + ++ C G+++LGE ++++ H+ +Y LLSN+YA
Sbjct: 636 RLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAG 695
Query: 473 RWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIK 532
RW+ T++R +M +G+KK PG + +E F GDK+H K+IY+++ + + IK
Sbjct: 696 RWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIK 755
Query: 533 RAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHS 592
GYVP T L D+D+E+K+D L++HSEKLA+A+ +L TP G IRI KNLRVC DCH+
Sbjct: 756 DIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHT 815
Query: 593 ATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
A ++S++ + +I++RD +RFHHFKNG CSC +W
Sbjct: 816 AFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 121/471 (25%), Positives = 207/471 (43%), Gaps = 76/471 (16%)
Query: 72 TKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLY 131
+ +T + + +A S L P+ A + +N+LIR++ + L L+
Sbjct: 63 SHLISTYISVGCLSHAVSLLRRFPPSDA------GVYHWNSLIRSYGDNGCANKC-LYLF 115
Query: 132 RTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXX 191
M P+ +T+PFV KAC +S +R G++ H + GF ++ V N ++ MY
Sbjct: 116 GLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRC 175
Query: 192 XXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM-QVMG 250
A KVFDE D V+W+++I YA+ G A+ +F M G
Sbjct: 176 RSLSD-----------ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFG 224
Query: 251 VCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAM 310
PD IT+V+VL CA LG LGK L + ++ +++ + N L+DM+AKCG +D+A
Sbjct: 225 CRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEAN 284
Query: 311 NLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSK 370
+F M +VSW +++ G + GR +AV LF++M E+ ++ D V++ +S
Sbjct: 285 TVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISG----- 339
Query: 371 LVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTM---PVEPNQIIW 427
++ G EAL R M ++PN++
Sbjct: 340 -------------------------------YAQRGLGYEALGVCRQMLSSGIKPNEVTL 368
Query: 428 RSIITACHARGELKLGESISKEL------LRNEPTHESNYVL--LSNIYAKLRRWEQKTK 479
S+++ C + G L G+ I LR + N V+ L ++YAK ++ +
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARA 428
Query: 480 VREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGRE 530
+ + + + V + MI G H + E++ EM E
Sbjct: 429 MFDSLSPKERDVVTWTVMI----------GGYSQHGDANKALELLSEMFEE 469
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 181/425 (42%), Gaps = 64/425 (15%)
Query: 70 VLTKFAATSSTFNAI--HYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSG 127
++T F + NA+ Y+ SD S +D +N++I ++A + K +
Sbjct: 154 LVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVAL 213
Query: 128 LQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHM 187
R +G P+ T VL CA L LGK +H V ++ V N ++ M
Sbjct: 214 EMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDM 273
Query: 188 YXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQ 247
Y A VF D V+W+AM+ GY++ G AV LF +MQ
Sbjct: 274 YAKCGMMDE-----------ANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQ 322
Query: 248 --------------------------VMGVC---------PDEITMVSVLTACADLGALE 272
+GVC P+E+T++SVL+ CA +GAL
Sbjct: 323 EEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALM 382
Query: 273 LGKWLESY-----IEWKKIPKSVE--LCNALIDMFAKCGDVDKAMNLFRQMD--SCTIVS 323
GK + Y I+ +K E + N LIDM+AKC VD A +F + +V+
Sbjct: 383 HGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVT 442
Query: 324 WTSVIVGLAMHGRGSEAVSLFDEMVEQGVE--PDDVSFIGVLSACCHSKLVDKGRS-YFN 380
WT +I G + HG ++A+ L EM E+ + P+ + L AC + G+ +
Sbjct: 443 WTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAY 502
Query: 381 SMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIIT--ACHARG 438
++ VP C++D+ ++ G + +A M + N++ W S++T H G
Sbjct: 503 ALRNQQNAVPLFVS-NCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGYG 560
Query: 439 ELKLG 443
E LG
Sbjct: 561 EEALG 565
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 398 bits (1023), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/508 (38%), Positives = 300/508 (59%), Gaps = 11/508 (2%)
Query: 120 TPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLH 179
T + L++ M+ GV P+ + VL AC + DL G+ + + + +
Sbjct: 189 TSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSF 248
Query: 180 VQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRA 239
V+ T++++Y A VFD + D VTWS MI GYA
Sbjct: 249 VRTTLVNLYAKCGKMEK-----------ARSVFDSMVEKDIVTWSTMIQGYASNSFPKEG 297
Query: 240 VGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDM 299
+ LF +M + PD+ ++V L++CA LGAL+LG+W S I+ + ++ + NALIDM
Sbjct: 298 IELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDM 357
Query: 300 FAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSF 359
+AKCG + + +F++M IV + I GLA +G + ++F + + G+ PD +F
Sbjct: 358 YAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTF 417
Query: 360 IGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP 419
+G+L C H+ L+ G +FN++ + + +EHYGCMVDL RAG + +A + MP
Sbjct: 418 LGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMP 477
Query: 420 VEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTK 479
+ PN I+W ++++ C + +L E++ KEL+ EP + NYV LSNIY+ RW++ +
Sbjct: 478 MRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAE 537
Query: 480 VREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPT 539
VR+MM+ +GMKK+PG + IEL ++ EF+A DKSH +IY ++++G E++ G+VPT
Sbjct: 538 VRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPT 597
Query: 540 TSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFISK 599
T V D++EE+KE L HSEKLA+A L++T G IR+VKNLRVC DCH K ISK
Sbjct: 598 TEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISK 657
Query: 600 VYNREIVVRDRNRFHHFKNGLCSCGDFW 627
+ REIVVRD NRFH F NG CSC D+W
Sbjct: 658 ITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 180/341 (52%), Gaps = 14/341 (4%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
+ FL+N+LI F + + L L+ ++ ++G+ + FT+P VLKAC S +LG +
Sbjct: 75 NIFLYNSLINGFVNNHLFHET-LDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDL 133
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H VVK GF+ D+ +++ +Y A K+FDE P VTW+A
Sbjct: 134 HSLVVKCGFNHDVAAMTSLLSIYSGSGRLND-----------AHKLFDEIPDRSVVTWTA 182
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
+ GY G A+ LF++M MGV PD +V VL+AC +G L+ G+W+ Y+E +
Sbjct: 183 LFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEME 242
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
+ K+ + L++++AKCG ++KA ++F M IV+W+++I G A + E + LF
Sbjct: 243 MQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFL 302
Query: 346 EMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRA 405
+M+++ ++PD S +G LS+C +D G + S+ + + ++D+ ++
Sbjct: 303 QMLQENLKPDQFSIVGFLSSCASLGALDLGE-WGISLIDRHEFLTNLFMANALIDMYAKC 361
Query: 406 GFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESI 446
G + + + M E + +I + I+ G +KL ++
Sbjct: 362 GAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVKLSFAV 401
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 397 bits (1021), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/480 (41%), Positives = 300/480 (62%), Gaps = 10/480 (2%)
Query: 149 VLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLA 208
V+ AC+ + L +++H V+K GFD + V NT++ Y +A
Sbjct: 189 VISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVA---------VA 239
Query: 209 GKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCP-DEITMVSVLTACAD 267
K+FD+ D V++++++ YA+ G S+ A +FR + V + IT+ +VL A +
Sbjct: 240 RKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSH 299
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSV 327
GAL +GK + + + V + ++IDM+ KCG V+ A F +M + + SWT++
Sbjct: 300 SGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAM 359
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG 387
I G MHG ++A+ LF M++ GV P+ ++F+ VL+AC H+ L +G +FN+M+G FG
Sbjct: 360 IAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFG 419
Query: 388 IVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESIS 447
+ P +EHYGCMVDLL RAGF+++A D ++ M ++P+ IIW S++ AC ++L E
Sbjct: 420 VEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISV 479
Query: 448 KELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEF 507
L + ++ Y+LLS+IYA RW+ +VR +M RG+ K PG +++ELN E+ F
Sbjct: 480 ARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVF 539
Query: 508 VAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAF 567
+ GD+ H Q ++IYE + E+ R++ AGYV TS V D+DEE+KE L HSEKLAIAF
Sbjct: 540 LIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAF 599
Query: 568 ALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
++NT PG+ + +VKNLRVC DCH+ K ISK+ +RE VVRD RFHHFK+G CSCGD+W
Sbjct: 600 GIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 165/380 (43%), Gaps = 64/380 (16%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D F +N++I A + S + L + +M + + P + ++P +KAC+ L D+ GK
Sbjct: 40 DVFSWNSVIADLARSGDS-AEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQT 98
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H FG+ D+ V + +I MY A KVFDE PK + V+W++
Sbjct: 99 HQQAFVFGYQSDIFVSSALIVMYSTCGKLED-----------ARKVFDEIPKRNIVSWTS 147
Query: 226 MIGGYARRGHSSRAVGLFREMQV------MGVCPDEITMVSVLTACADLGALELGKWLES 279
MI GY G++ AV LF+++ V + D + +VSV++AC+ + A L + + S
Sbjct: 148 MIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHS 207
Query: 280 YIEWKKIPKSVELCNALIDMFAKCGD--VDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRG 337
++ + + V + N L+D +AK G+ V A +F Q+ VS+ S++ A G
Sbjct: 208 FVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMS 267
Query: 338 SEAVSLF------------------------------------DEMVEQGVEPDDVSFIG 361
+EA +F D+++ G+E D +
Sbjct: 268 NEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTS 327
Query: 362 VLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTM--- 418
++ C V+ R F+ M+ + + M+ G +AL+ M
Sbjct: 328 IIDMYCKCGRVETARKAFDRMKN-----KNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 419 PVEPNQIIWRSIITACHARG 438
V PN I + S++ AC G
Sbjct: 383 GVRPNYITFVSVLAACSHAG 402
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 42/278 (15%)
Query: 217 KTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKW 276
KTD +W+++I AR G S+ A+ F M+ + + P + + AC+ L + GK
Sbjct: 38 KTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQ 97
Query: 277 LESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGR 336
+ + +ALI M++ CG ++ A +F ++ IVSWTS+I G ++G
Sbjct: 98 THQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGN 157
Query: 337 GSEAVSLFDEMVEQGVEPDDVSF------IGVLSACC-----------HSKLV----DKG 375
+AVSLF +++ + DD F + V+SAC HS ++ D+G
Sbjct: 158 ALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRG 217
Query: 376 RSYFNSM--------EGNFGIVPKI---------EHYGCMVDLLSRAGFVKEALD----F 414
S N++ EG + KI Y ++ + +++G EA +
Sbjct: 218 VSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL 277
Query: 415 VRTMPVEPNQIIWRSIITACHARGELKLGESISKELLR 452
V+ V N I +++ A G L++G+ I +++R
Sbjct: 278 VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR 315
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 397 bits (1020), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/518 (38%), Positives = 314/518 (60%), Gaps = 17/518 (3%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+ T+I A++ + L+L MLR V PN +TY VL++C G+SD+R+ +H +
Sbjct: 130 WTTMISAYSKC-KIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGI 185
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
+K G + D+ V++ +I ++ A VFDE D++ W+++IGG
Sbjct: 186 IKEGLESDVFVRSALIDVFAKLGEPED-----------ALSVFDEMVTGDAIVWNSIIGG 234
Query: 230 YARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKS 289
+A+ S A+ LF+ M+ G ++ T+ SVL AC L LELG +++++ K +
Sbjct: 235 FAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG--MQAHVHIVKYDQD 292
Query: 290 VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVE 349
+ L NAL+DM+ KCG ++ A+ +F QM +++W+++I GLA +G EA+ LF+ M
Sbjct: 293 LILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKS 352
Query: 350 QGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVK 409
G +P+ ++ +GVL AC H+ L++ G YF SM+ +GI P EHYGCM+DLL +AG +
Sbjct: 353 SGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLD 412
Query: 410 EALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYA 469
+A+ + M EP+ + WR+++ AC + + L E +K+++ +P Y LLSNIYA
Sbjct: 413 DAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYA 472
Query: 470 KLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGR 529
++W+ ++R M RG+KK PG + IE+N ++ F+ GD SH Q ++ + ++++
Sbjct: 473 NSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIH 532
Query: 530 EIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCED 589
+ GYVP T+ VL D++ E ED+L HSEKLA+AF L+ P IRI KNLR+C D
Sbjct: 533 RLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGD 592
Query: 590 CHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
CH K SK+ R IV+RD R+HHF++G CSCGD+W
Sbjct: 593 CHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 136/305 (44%), Gaps = 24/305 (7%)
Query: 137 YGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXX 196
+G+ + TY ++K C + G + + G + + N +I+MY
Sbjct: 55 HGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLND 114
Query: 197 XXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEI 256
A ++FD+ P+ + ++W+ MI Y++ +A+ L M V P+
Sbjct: 115 -----------AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 257 TMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM 316
T SVL +C + + + L I + + V + +ALID+FAK G+ + A+++F +M
Sbjct: 164 TYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220
Query: 317 DSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGR 376
+ + W S+I G A + R A+ LF M G + + VL AC L++ G
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG- 279
Query: 377 SYFNSMEGNFGIVPKIEHY---GCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITA 433
M+ + IV + +VD+ + G +++AL M E + I W ++I+
Sbjct: 280 -----MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMISG 333
Query: 434 CHARG 438
G
Sbjct: 334 LAQNG 338
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 11/197 (5%)
Query: 238 RAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALI 297
RA+ +Q G+ D T ++ C A+ G + ++ + + L N LI
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103
Query: 298 DMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDV 357
+M+ K ++ A LF QM ++SWT++I + +A+ L M+ V P+
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 358 SFIGVLSACCHSKLVDKGRSYFNSMEGNF---GIVPKIEHYGCMVDLLSRAGFVKEALDF 414
++ VL +C G S + G+ + ++D+ ++ G ++AL
Sbjct: 164 TYSSVLRSC-------NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 216
Query: 415 VRTMPVEPNQIIWRSII 431
M V + I+W SII
Sbjct: 217 FDEM-VTGDAIVWNSII 232
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/576 (38%), Positives = 327/576 (56%), Gaps = 55/576 (9%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYG-VVPNKFTYPFVLKACAGLSDLRLGKA 164
DAF+FNTL+R ++ + + +S + ++ M+R G V P+ F++ FV+KA LR G
Sbjct: 69 DAFMFNTLVRGYSESDEPHNS-VAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 165 VHGSVVKFGFDDDLHVQNTMIHMYX------------------XXXXXXXXXXXXXXXXX 206
+H +K G + L V T+I MY
Sbjct: 128 MHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGND 187
Query: 207 LAG--KVFDESPKTDSVTWSAMIGGYARRGH-------------------SSRAVGL--- 242
+AG ++FD+ + +W+ M+ GY + G S+ VG+
Sbjct: 188 VAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHN 247
Query: 243 ---------FREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELC 293
FRE+Q G+ P+E+++ VL+AC+ G+ E GK L ++E V +
Sbjct: 248 GSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVN 307
Query: 294 NALIDMFAKCGDVDKAMNLFRQM-DSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGV 352
NALIDM+++CG+V A +F M + IVSWTS+I GLAMHG+G EAV LF+EM GV
Sbjct: 308 NALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGV 367
Query: 353 EPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEAL 412
PD +SFI +L AC H+ L+++G YF+ M+ + I P+IEHYGCMVDL R+G +++A
Sbjct: 368 TPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAY 427
Query: 413 DFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLR 472
DF+ MP+ P I+WR+++ AC + G ++L E + + L +P + + VLLSN YA
Sbjct: 428 DFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAG 487
Query: 473 RWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIK 532
+W+ +R+ M ++ +KK +++E+ M +F AG+K + +E + E+ +K
Sbjct: 488 KWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLK 547
Query: 533 -RAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCH 591
AGY P + L D++EE+KED + KHSEKLA+AFAL G IRIVKNLR+C DCH
Sbjct: 548 DEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCH 607
Query: 592 SATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
+ K SKVY EI+VRDRNRFH FK+G CSC D+W
Sbjct: 608 AVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 121/300 (40%), Gaps = 25/300 (8%)
Query: 149 VLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLA 208
+L +C +LR +HG +K+G D D + +I A
Sbjct: 11 LLNSC---KNLRALTQIHGLFIKYGVDTDSYFTGKLI---------LHCAISISDALPYA 58
Query: 209 GKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMG-VCPDEITMVSVLTACAD 267
++ P+ D+ ++ ++ GY+ +V +F EM G V PD + V+ A +
Sbjct: 59 RRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVEN 118
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSV 327
+L G + + + + LI M+ CG V+ A +F +M +V+W +V
Sbjct: 119 FRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAV 178
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG 387
I + A +FD+M+ + +V G + A ++ + F+ M
Sbjct: 179 ITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKA----GELESAKRIFSEMPHRDD 234
Query: 388 IVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRSIITACHARGELKLGE 444
+ + M+ ++ G E+ + R + + PN++ +++AC G + G+
Sbjct: 235 V-----SWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGK 289
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/520 (38%), Positives = 307/520 (59%), Gaps = 14/520 (2%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+ +I ++ T S S L ++ M+R PN+FT+ VL +C S L LGK +HG +
Sbjct: 121 WTAMISRYSQTGHS-SEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLI 179
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
VK+ +D + V ++++ MY A ++F+ P+ D V+ +A+I G
Sbjct: 180 VKWNYDSHIFVGSSLLDMYAKAGQIKE-----------AREIFECLPERDVVSCTAIIAG 228
Query: 230 YARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKS 289
YA+ G A+ +F + G+ P+ +T S+LTA + L L+ GK ++ +++P
Sbjct: 229 YAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFY 288
Query: 290 VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMV- 348
L N+LIDM++KCG++ A LF M T +SW +++VG + HG G E + LF M
Sbjct: 289 AVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRD 348
Query: 349 EQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM-EGNFGIVPKIEHYGCMVDLLSRAGF 407
E+ V+PD V+ + VLS C H ++ D G + F+ M G +G P EHYGC+VD+L RAG
Sbjct: 349 EKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGR 408
Query: 408 VKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNI 467
+ EA +F++ MP +P + S++ AC + +GES+ + L+ EP + NYV+LSN+
Sbjct: 409 IDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNL 468
Query: 468 YAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEM 527
YA RW VR MM + + K PG + I+ + F A D++H + +++ + E+
Sbjct: 469 YASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEI 528
Query: 528 GREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVC 587
++K+AGYVP S VL D+DEE KE L HSEKLA+ F L+ T G PIR+ KNLR+C
Sbjct: 529 SIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRIC 588
Query: 588 EDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
DCH+ K SKV+ RE+ +RD+NRFH +G+CSCGD+W
Sbjct: 589 VDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 154/322 (47%), Gaps = 20/322 (6%)
Query: 146 YPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXX 205
Y +L AC LR G+ VH ++K + +++ ++ Y
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLED--------- 105
Query: 206 XLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTAC 265
A KV DE P+ + V+W+AMI Y++ GHSS A+ +F EM P+E T +VLT+C
Sbjct: 106 --ARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSC 163
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
L LGK + I + + ++L+DM+AK G + +A +F + +VS T
Sbjct: 164 IRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCT 223
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGR-SYFNSMEG 384
++I G A G EA+ +F + +G+ P+ V++ +L+A L+D G+ ++ + +
Sbjct: 224 AIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRR 283
Query: 385 NFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGE 444
+++ ++D+ S+ G + A MP E I W +++ G LG
Sbjct: 284 ELPFYAVLQN--SLIDMYSKCGNLSYARRLFDNMP-ERTAISWNAMLVGYSKHG---LGR 337
Query: 445 SISK--ELLRNEPTHESNYVLL 464
+ + L+R+E + + V L
Sbjct: 338 EVLELFRLMRDEKRVKPDAVTL 359
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust.
Identities = 183/420 (43%), Positives = 276/420 (65%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A +FD+ PK D V+W+AMI GY++ GHS A+ LF +M+ G + + S L+ CAD
Sbjct: 362 AKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCAD 421
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSV 327
+ ALELGK L + + NAL+ M+ KCG +++A +LF++M IVSW ++
Sbjct: 422 VVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTM 481
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG 387
I G + HG G A+ F+ M +G++PDD + + VLSAC H+ LVDKGR YF +M ++G
Sbjct: 482 IAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYG 541
Query: 388 IVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESIS 447
++P +HY CMVDLL RAG +++A + ++ MP EP+ IW +++ A G +L E+ +
Sbjct: 542 VMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAA 601
Query: 448 KELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEF 507
++ EP + YVLLSN+YA RW K+R M +G+KKVPG + IE+ N+ F
Sbjct: 602 DKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTF 661
Query: 508 VAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAF 567
GD+ H + +I+ ++E+ +K+AGYV TS VL D++EE+KE + HSE+LA+A+
Sbjct: 662 SVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAY 721
Query: 568 ALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
++ G PIR++KNLRVCEDCH+A K+++++ R I++RD NRFHHFK+G CSCGD+W
Sbjct: 722 GIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 133/291 (45%), Gaps = 20/291 (6%)
Query: 79 STFNAI--HYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLR 136
ST+N + YA S+ + D + +I ++ + S + L+L+ M R
Sbjct: 344 STWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEA-LRLFVQMER 402
Query: 137 YGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXX 196
G N+ ++ L CA + L LGK +HG +VK G++ V N ++ MY
Sbjct: 403 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 462
Query: 197 XXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEI 256
A +F E D V+W+ MI GY+R G A+ F M+ G+ PD+
Sbjct: 463 -----------ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDA 511
Query: 257 TMVSVLTACADLGALELGK--WLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFR 314
TMV+VL+AC+ G ++ G+ + ++ +P S ++D+ + G ++ A NL +
Sbjct: 512 TMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYA-CMVDLLGRAGLLEDAHNLMK 570
Query: 315 QMD-SCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLS 364
M W +++ +HG A + D++ +EP++ +LS
Sbjct: 571 NMPFEPDAAIWGTLLGASRVHGNTELAETAADKIF--AMEPENSGMYVLLS 619
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 119/255 (46%), Gaps = 26/255 (10%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A ++FDESP D TW+AM+ GY + A LF +M +E++ ++L
Sbjct: 269 ARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPE----RNEVSWNAMLAGYVQ 324
Query: 268 LGALELGKWLESYIEWKKIP-KSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTS 326
+E+ K L + +P ++V N +I +A+CG + +A NLF +M VSW +
Sbjct: 325 GERMEMAKEL-----FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAA 379
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNF 386
+I G + G EA+ LF +M +G + SF LS C ++ G+
Sbjct: 380 MIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGR----- 434
Query: 387 GIVPKIEHYGCMVD-----LLSRAGFVKEALDFVRTMPVEPNQIIWRSIITAC--HARGE 439
+V GC V + + G ++EA D + M + + + W ++I H GE
Sbjct: 435 -LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGE 492
Query: 440 --LKLGESISKELLR 452
L+ ES+ +E L+
Sbjct: 493 VALRFFESMKREGLK 507
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 114/234 (48%), Gaps = 21/234 (8%)
Query: 207 LAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACA 266
LA K+FDE P+ D V+W+ MI GY R + +A LF M VC + ++L+ A
Sbjct: 113 LARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC----SWNTMLSGYA 168
Query: 267 DLGALELGKWLESYIEWKKIPKSVELC-NALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
G ++ ++ + ++P+ ++ NAL+ + + +++A LF+ ++ +VSW
Sbjct: 169 QNGCVD-----DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWN 223
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
++ G + EA FD M + V VS+ +++ S +D+ R F+
Sbjct: 224 CLLGGFVKKKKIVEARQFFDSMNVRDV----VSWNTIITGYAQSGKIDEARQLFDE---- 275
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGE 439
V + + MV + V+EA + MP E N++ W +++ A + +GE
Sbjct: 276 -SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP-ERNEVSWNAML-AGYVQGE 326
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 130/306 (42%), Gaps = 62/306 (20%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A +VF P+ SV+++ MI GY R G A LF EM P+ D
Sbjct: 83 ALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM------PER-----------D 125
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSV 327
L + W N +I + + ++ KA LF M + SW ++
Sbjct: 126 L------------VSW----------NVMIKGYVRNRNLGKARELFEIMPERDVCSWNTM 163
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG 387
+ G A +G +A S+FD M E+ +DVS+ +LSA + +++ F S E N+
Sbjct: 164 LSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLFKSRE-NWA 218
Query: 388 IVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESIS 447
+V + C++ + + EA F +M V + + W +IIT G++ +
Sbjct: 219 LVS----WNCLLGGFVKKKKIVEARQFFDSMNVR-DVVSWNTIITGYAQSGKI----DEA 269
Query: 448 KELLRNEPTHES-NYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCE 506
++L P + + + + Y + R E+ RE+ D K+P + N +
Sbjct: 270 RQLFDESPVQDVFTWTAMVSGYIQNRMVEE---ARELFD-----KMPERNEVSWNAMLAG 321
Query: 507 FVAGDK 512
+V G++
Sbjct: 322 YVQGER 327
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/422 (45%), Positives = 274/422 (64%), Gaps = 5/422 (1%)
Query: 211 VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGA 270
+F + K V+W+ MIG Y + AV L+ M+ G PD +++ SVL AC D A
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324
Query: 271 LELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVG 330
L LGK + YIE KK+ ++ L NALIDM+AKCG ++KA ++F M S +VSWT++I
Sbjct: 325 LSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISA 384
Query: 331 LAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVP 390
GRG +AV+LF ++ + G+ PD ++F+ L+AC H+ L+++GRS F M ++ I P
Sbjct: 385 YGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITP 444
Query: 391 KIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKEL 450
++EH CMVDLL RAG VKEA F++ M +EPN+ +W +++ AC + +G + +L
Sbjct: 445 RLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKL 504
Query: 451 LRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAG 510
+ P YVLLSNIYAK RWE+ T +R +M +G+KK PG++ +E+N + F+ G
Sbjct: 505 FQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVG 564
Query: 511 DKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALL 570
D+SH Q +IY +D + +++K GYVP + L D++EEDKE L HSEKLAI FAL+
Sbjct: 565 DRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALM 624
Query: 571 NTP-----PGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGD 625
NT IRI KNLR+C DCH A K IS++ +REI++RD NRFH F+ G+CSCGD
Sbjct: 625 NTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGD 684
Query: 626 FW 627
+W
Sbjct: 685 YW 686
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 86/191 (45%), Gaps = 12/191 (6%)
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIH 186
++LY M G P+ + VL AC S L LGK +HG + + +L ++N +I
Sbjct: 293 AVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALID 352
Query: 187 MYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM 246
MY A VF+ D V+W+AMI Y G AV LF ++
Sbjct: 353 MYAKCGCLEK-----------ARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKL 401
Query: 247 QVMGVCPDEITMVSVLTACADLGALELGK-WLESYIEWKKIPKSVELCNALIDMFAKCGD 305
Q G+ PD I V+ L AC+ G LE G+ + + KI +E ++D+ + G
Sbjct: 402 QDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGK 461
Query: 306 VDKAMNLFRQM 316
V +A + M
Sbjct: 462 VKEAYRFIQDM 472
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 124/286 (43%), Gaps = 11/286 (3%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A KVFDE P+ + + + MI Y G V +F M V PD T VL AC+
Sbjct: 93 ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSC 152
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSV 327
G + +G+ + + ++ + N L+ M+ KCG + +A + +M +VSW S+
Sbjct: 153 SGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSL 212
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG 387
+VG A + R +A+ + EM + D + +L A S + Y M G
Sbjct: 213 VVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAV--SNTTTENVMYVKDMFFKMG 270
Query: 388 IVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPV---EPNQIIWRSIITACHARGELKLGE 444
+ + M+ + + EA++ M EP+ + S++ AC L LG+
Sbjct: 271 -KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGK 329
Query: 445 SISKELLRNEPTHESNYVL---LSNIYAKLRRWEQKTKVREMMDMR 487
I + R + N +L L ++YAK E+ V E M R
Sbjct: 330 KIHGYIERKKLI--PNLLLENALIDMYAKCGCLEKARDVFENMKSR 373
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 394 bits (1013), Expect = e-110, Method: Compositional matrix adjust.
Identities = 187/507 (36%), Positives = 294/507 (57%), Gaps = 23/507 (4%)
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIH 186
L +R ML G+ ++ + ACAGL L+ G+ +H GF DL QN ++
Sbjct: 575 ALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVT 634
Query: 187 MYXXXXXXXXXXXXXXXXXXLAGKV------FDESPKTDSVTWSAMIGGYARRGHSSRAV 240
+Y GK+ F+++ D++ W+A++ G+ + G++ A+
Sbjct: 635 LYSR-----------------CGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEAL 677
Query: 241 GLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMF 300
+F M G+ + T S + A ++ ++ GK + + I E+CNALI M+
Sbjct: 678 RVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMY 737
Query: 301 AKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFI 360
AKCG + A F ++ + VSW ++I + HG GSEA+ FD+M+ V P+ V+ +
Sbjct: 738 AKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLV 797
Query: 361 GVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPV 420
GVLSAC H LVDKG +YF SM +G+ PK EHY C+VD+L+RAG + A +F++ MP+
Sbjct: 798 GVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPI 857
Query: 421 EPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKV 480
+P+ ++WR++++AC +++GE + LL EP + YVLLSN+YA ++W+ +
Sbjct: 858 KPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLT 917
Query: 481 REMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTT 540
R+ M +G+KK PG + IE+ N + F GD++H +I+E ++ + GYV
Sbjct: 918 RQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDC 977
Query: 541 SQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKV 600
+L ++ E K+ ++ HSEKLAI+F LL+ P PI ++KNLRVC DCH+ KF+SKV
Sbjct: 978 FSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKV 1037
Query: 601 YNREIVVRDRNRFHHFKNGLCSCGDFW 627
NREI+VRD RFHHF+ G CSC D+W
Sbjct: 1038 SNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 191/428 (44%), Gaps = 53/428 (12%)
Query: 108 FLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLS-DLRLGKAVH 166
F +N +I+ A + L+ M+ V PN+ T+ VL+AC G S + + +H
Sbjct: 152 FTWNKMIKELA-SRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIH 210
Query: 167 GSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAM 226
++ G D V N +I +Y LA +VFD D +W AM
Sbjct: 211 ARILYQGLRDSTVVCNPLIDLYSRNGFVD-----------LARRVFDGLRLKDHSSWVAM 259
Query: 227 IGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKI 286
I G ++ + A+ LF +M V+G+ P SVL+AC + +LE+G+ L +
Sbjct: 260 ISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 319
Query: 287 PKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDE 346
+CNAL+ ++ G++ A ++F M V++ ++I GL+ G G +A+ LF
Sbjct: 320 SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 379
Query: 347 MVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAG 406
M G+EPD + ++ AC + +G+ ++ G + G +++L ++
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTLFRGQQ-LHAYTTKLGFASNNKIEGALLNLYAKCA 438
Query: 407 FVKEALDF-------------------------------VRTMPVE---PNQIIWRSIIT 432
++ ALD+ R M +E PNQ + SI+
Sbjct: 439 DIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 498
Query: 433 ACHARGELKLGESISKELLRNEPTHESNYV--LLSNIYAKLRRWEQKTKVREMMDMRGMK 490
C G+L+LGE I ++++ + YV +L ++YAKL + + + ++ G
Sbjct: 499 TCIRLGDLELGEQIHSQIIKTNFQLNA-YVCSVLIDMYAKLGKLDTAWDI--LIRFAGKD 555
Query: 491 KVPGSTMI 498
V +TMI
Sbjct: 556 VVSWTTMI 563
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 159/337 (47%), Gaps = 16/337 (4%)
Query: 103 SSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLG 162
S DA +NTLI + + + ++L++ M G+ P+ T ++ AC+ L G
Sbjct: 350 SQRDAVTYNTLINGLSQCGYGEKA-MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408
Query: 163 KAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVT 222
+ +H K GF + ++ ++++Y A F E+ + V
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIET-----------ALDYFLETEVENVVL 457
Query: 223 WSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIE 282
W+ M+ Y + +FR+MQ+ + P++ T S+L C LG LELG+ + S I
Sbjct: 458 WNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 517
Query: 283 WKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVS 342
+ +C+ LIDM+AK G +D A ++ + +VSWT++I G + +A++
Sbjct: 518 KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALT 577
Query: 343 LFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLL 402
F +M+++G+ D+V +SAC + + +G+ ++ G + +V L
Sbjct: 578 TFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTLY 636
Query: 403 SRAGFVKEA-LDFVRTMPVEPNQIIWRSIITACHARG 438
SR G ++E+ L F +T + I W ++++ G
Sbjct: 637 SRCGKIEESYLAFEQTEA--GDNIAWNALVSGFQQSG 671
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 150/344 (43%), Gaps = 46/344 (13%)
Query: 138 GVVPNKFTYPFVLKACAGLS-DLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXX 196
G+ PN T ++L+ C + L G+ +H ++K G D + + + Y
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 197 XXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEI 256
A KVFDE P+ TW+ MI A R GLF M V P+E
Sbjct: 139 -----------AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEG 187
Query: 257 TMVSVLTAC-ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQ 315
T VL AC A ++ + + + I ++ + S +CN LID++++ G VD A +F
Sbjct: 188 TFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDG 247
Query: 316 MDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKG 375
+ SW ++I GL+ + +EA+ LF +M G+ P +F VLSAC + ++ G
Sbjct: 248 LRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG 307
Query: 376 RSYFN------------------SMEGNFGIVPKIEH------------YGCMVDLLSRA 405
S+ + G + EH Y +++ LS+
Sbjct: 308 EQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQC 367
Query: 406 GFVKEALDFVRTM---PVEPNQIIWRSIITACHARGELKLGESI 446
G+ ++A++ + M +EP+ S++ AC A G L G+ +
Sbjct: 368 GYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL 411
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 394 bits (1013), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/506 (40%), Positives = 299/506 (59%), Gaps = 17/506 (3%)
Query: 124 KSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNT 183
K + L+ M R GV PN+FTY +L A +S VH VVK ++ V
Sbjct: 378 KEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTA 433
Query: 184 MIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLF 243
++ Y A KVF D V WSAM+ GYA+ G + A+ +F
Sbjct: 434 LLDAYVKLGKVEE-----------AAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMF 482
Query: 244 REMQVMGVCPDEITMVSVLTACADLGA-LELGKWLESYIEWKKIPKSVELCNALIDMFAK 302
E+ G+ P+E T S+L CA A + GK + ++ S+ + +AL+ M+AK
Sbjct: 483 GELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAK 542
Query: 303 CGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGV 362
G+++ A +F++ +VSW S+I G A HG+ +A+ +F EM ++ V+ D V+FIGV
Sbjct: 543 KGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGV 602
Query: 363 LSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEP 422
+AC H+ LV++G YF+ M + I P EH CMVDL SRAG +++A+ + MP
Sbjct: 603 FAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPA 662
Query: 423 NQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVRE 482
IWR+I+ AC + +LG +++++ +P + YVLLSN+YA+ W+++ KVR+
Sbjct: 663 GSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRK 722
Query: 483 MMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQ 542
+M+ R +KK PG + IE+ N+ F+AGD+SH QIY ++++ +K GY P TS
Sbjct: 723 LMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSY 782
Query: 543 VLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYN 602
VL DID+E KE L +HSE+LAIAF L+ TP G+P+ I+KNLRVC DCH K I+K+
Sbjct: 783 VLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEE 842
Query: 603 REIVVRDRNRFHHF-KNGLCSCGDFW 627
REIVVRD NRFHHF +G+CSCGDFW
Sbjct: 843 REIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 178/408 (43%), Gaps = 49/408 (12%)
Query: 112 TLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVK 171
+L+ F+ +++ + +L+ + R G+ + + VLK A L D G+ +H +K
Sbjct: 63 SLLFGFSRDGRTQEAK-RLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIK 121
Query: 172 FGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYA 231
FGF DD+ V +++ Y KVFDE + + VTW+ +I GYA
Sbjct: 122 FGFLDDVSVGTSLVDTYMKGSNFKD-----------GRKVFDEMKERNVVTWTTLISGYA 170
Query: 232 RRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVE 291
R + + LF MQ G P+ T + L A+ G G + + + + K++
Sbjct: 171 RNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 230
Query: 292 LCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQG 351
+ N+LI+++ KCG+V KA LF + + ++V+W S+I G A +G EA+ +F M
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY 290
Query: 352 VEPDDVSFIGVLSACC-----------HSKLVDKGRSY-----------FNSMEGNFGIV 389
V + SF V+ C H +V G + ++ +
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDAL 350
Query: 390 PKIEHYGCMVDLLSR----AGFVK-----EALDFVRTMP---VEPNQIIWRSIITACHAR 437
+ GC+ +++S +GF++ EA+D M V PN+ + I+TA
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVI 410
Query: 438 GELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMD 485
++ + K N + L + Y KL + E+ KV +D
Sbjct: 411 SPSEVHAQVVKT---NYERSSTVGTALLDAYVKLGKVEEAAKVFSGID 455
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 120/257 (46%), Gaps = 13/257 (5%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+ TLI +A + L L+ M G PN FT+ L A G VH V
Sbjct: 162 WTTLISGYARNSMNDEV-LTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV 220
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
VK G D + V N++I++Y A +FD++ VTW++MI G
Sbjct: 221 VKNGLDKTIPVSNSLINLYLKCGNVRK-----------ARILFDKTEVKSVVTWNSMISG 269
Query: 230 YARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKS 289
YA G A+G+F M++ V E + SV+ CA+L L + L +
Sbjct: 270 YAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFD 329
Query: 290 VELCNALIDMFAKCGDVDKAMNLFRQMDSC-TIVSWTSVIVGLAMHGRGSEAVSLFDEMV 348
+ AL+ ++KC + A+ LF+++ +VSWT++I G + EAV LF EM
Sbjct: 330 QNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMK 389
Query: 349 EQGVEPDDVSFIGVLSA 365
+GV P++ ++ +L+A
Sbjct: 390 RKGVRPNEFTYSVILTA 406
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 102/231 (44%), Gaps = 2/231 (0%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A +FD+SP D ++ +++ G++R G + A LF + +G+ D SVL A
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSV 327
L G+ L V + +L+D + K + +F +M +V+WT++
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG 387
I G A + E ++LF M +G +P+ +F L + +G + N G
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN-G 224
Query: 388 IVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARG 438
+ I +++L + G V++A V+ + + W S+I+ A G
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISGYAANG 274
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/541 (37%), Positives = 309/541 (57%), Gaps = 20/541 (3%)
Query: 88 TSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYP 147
T LF + P D +N +I +++ Q ++S L +R M G F +
Sbjct: 304 TRMLFDEMP-------ELDFVSYNVVISSYSQADQYEAS-LHFFREMQCMGFDRRNFPFA 355
Query: 148 FVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXL 207
+L A LS L++G+ +H + D LHV N+++ MY
Sbjct: 356 TMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEE----------- 404
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A +F P+ +V+W+A+I GY ++G + LF +M+ + D+ T +VL A A
Sbjct: 405 AELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASAS 464
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSV 327
+L LGK L ++I ++V + L+DM+AKCG + A+ +F +M VSW ++
Sbjct: 465 FASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNAL 524
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG 387
I A +G G A+ F +M+E G++PD VS +GVL+AC H V++G YF +M +G
Sbjct: 525 ISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYG 584
Query: 388 IVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESIS 447
I PK +HY CM+DLL R G EA + MP EP++I+W S++ AC L E +
Sbjct: 585 ITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAA 644
Query: 448 KELLRNEPTHESN-YVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCE 506
++L E ++ YV +SNIYA WE+ V++ M RG+KKVP + +E+N+++
Sbjct: 645 EKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHV 704
Query: 507 FVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIA 566
F + D++H +I ++E+ EI+R GY P TS V+ D+DE+ K ++L HSE+LA+A
Sbjct: 705 FSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVA 764
Query: 567 FALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDF 626
FAL++TP G PI ++KNLR C DCH+A K ISK+ REI VRD +RFHHF G+CSCGD+
Sbjct: 765 FALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDY 824
Query: 627 W 627
W
Sbjct: 825 W 825
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 160/343 (46%), Gaps = 22/343 (6%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D+ FNTLI + S + L+ M + G P+ FT+ VLKA GL D LG+ +
Sbjct: 214 DSVTFNTLITGYEKDGLYTES-IHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H V GF D V N ++ Y +FDE P+ D V+++
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRM-----------LFDEMPELDFVSYNV 321
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
+I Y++ ++ FREMQ MG ++L+ A+L +L++G+ L
Sbjct: 322 VISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLAT 381
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
+ + N+L+DM+AKC ++A +F+ + T VSWT++I G G + LF
Sbjct: 382 ADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFT 441
Query: 346 EMVEQGVEPDDVSFIGVL--SACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLS 403
+M + D +F VL SA S L+ K F GN + + +VD+ +
Sbjct: 442 KMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGN---LENVFSGSGLVDMYA 498
Query: 404 RAGFVKEALDFVRTMPVEPNQIIWRSIITACHA---RGELKLG 443
+ G +K+A+ MP + N + W ++I+A HA GE +G
Sbjct: 499 KCGSIKDAVQVFEEMP-DRNAVSWNALISA-HADNGDGEAAIG 539
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 133/317 (41%), Gaps = 19/317 (5%)
Query: 127 GLQLYRTMLRYG--VVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDD--LHVQN 182
+L+R M R +P+ T+ +L C VH VK GFD + L V N
Sbjct: 129 AFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSN 188
Query: 183 TMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGL 242
++ Y LA +F+E P+ DSVT++ +I GY + G + ++ L
Sbjct: 189 VLLKSYCEVRRLD-----------LACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHL 237
Query: 243 FREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAK 302
F +M+ G P + T VL A L LG+ L + + + N ++D ++K
Sbjct: 238 FLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSK 297
Query: 303 CGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGV 362
V + LF +M VS+ VI + + ++ F EM G + + F +
Sbjct: 298 HDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATM 357
Query: 363 LSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYG-CMVDLLSRAGFVKEALDFVRTMPVE 421
LS + + GR + I H G +VD+ ++ +EA +++P +
Sbjct: 358 LSIAANLSSLQMGRQL--HCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP-Q 414
Query: 422 PNQIIWRSIITACHARG 438
+ W ++I+ +G
Sbjct: 415 RTTVSWTALISGYVQKG 431
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 6/163 (3%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVC--PDEITMVSVLTAC 265
A +FD P VTW+ ++G YAR H A LFR+M C PD +T ++L C
Sbjct: 98 ARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGC 157
Query: 266 ADLGALELGKWLESY---IEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIV 322
D + ++ + + P + + N L+ + + +D A LF ++ V
Sbjct: 158 NDAVPQNAVGQVHAFAVKLGFDTNP-FLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSV 216
Query: 323 SWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSA 365
++ ++I G G +E++ LF +M + G +P D +F GVL A
Sbjct: 217 TFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/565 (36%), Positives = 322/565 (56%), Gaps = 21/565 (3%)
Query: 64 LINNPLVLTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQS 123
+ N LV F A+ + ++ YA R+ + +++ N LI A +
Sbjct: 426 FVYNELVANAFVASYAKCGSLSYAQRVFH------GIRSKTVNSW--NALIGGHAQSNDP 477
Query: 124 KSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNT 183
+ S L + M G++P+ FT +L AC+ L LRLGK VHG +++ + DL V +
Sbjct: 478 RLS-LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLS 536
Query: 184 MIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLF 243
++ +Y +FD V+W+ +I GY + G RA+G+F
Sbjct: 537 VLSLYIHCGELCTVQA-----------LFDAMEDKSLVSWNTVITGYLQNGFPDRALGVF 585
Query: 244 REMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKC 303
R+M + G+ I+M+ V AC+ L +L LG+ +Y + + +LIDM+AK
Sbjct: 586 RQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKN 645
Query: 304 GDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVL 363
G + ++ +F + + SW ++I+G +HG EA+ LF+EM G PDD++F+GVL
Sbjct: 646 GSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVL 705
Query: 364 SACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFV-RTMPVEP 422
+AC HS L+ +G Y + M+ +FG+ P ++HY C++D+L RAG + +AL V M E
Sbjct: 706 TACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEA 765
Query: 423 NQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVRE 482
+ IW+S++++C L++GE ++ +L EP NYVLLSN+YA L +WE KVR+
Sbjct: 766 DVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQ 825
Query: 483 MMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQ 542
M+ ++K G + IELN ++ FV G++ D +++I + + +I + GY P T
Sbjct: 826 RMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMS 885
Query: 543 VLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYN 602
V D+ EE+K + L HSEKLA+ + L+ T GT IR+ KNLR+C DCH+A K ISKV
Sbjct: 886 VQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVME 945
Query: 603 REIVVRDRNRFHHFKNGLCSCGDFW 627
REIVVRD RFHHFKNG+CSCGD+W
Sbjct: 946 REIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 125/240 (52%), Gaps = 17/240 (7%)
Query: 139 VVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXX 198
++P+ FTYP V+KACAG+SD+ +G AVHG VVK G +D+ V N ++ Y
Sbjct: 183 LLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTD-- 240
Query: 199 XXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVM----GVCPD 254
A ++FD P+ + V+W++MI ++ G S + L EM PD
Sbjct: 241 ---------ALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPD 291
Query: 255 EITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFR 314
T+V+VL CA + LGK + + ++ K + L NAL+DM++KCG + A +F+
Sbjct: 292 VATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFK 351
Query: 315 QMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQG--VEPDDVSFIGVLSACCHSKLV 372
++ +VSW +++ G + G + +M+ G V+ D+V+ + + C H +
Sbjct: 352 MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 411
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 123/272 (45%), Gaps = 16/272 (5%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYG---VVPNKFTYPFVLKACAGLSDLRLGKAVH 166
+N++IR F+ S+ S L L M G +P+ T VL CA ++ LGK VH
Sbjct: 256 WNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVH 315
Query: 167 GSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAM 226
G VK D +L + N ++ MY A +F + + V+W+ M
Sbjct: 316 GWAVKLRLDKELVLNNALMDMYSKCGCITN-----------AQMIFKMNNNKNVVSWNTM 364
Query: 227 IGGYARRGHSSRAVGLFREMQVMG--VCPDEITMVSVLTACADLGALELGKWLESYIEWK 284
+GG++ G + + R+M G V DE+T+++ + C L K L Y +
Sbjct: 365 VGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQ 424
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLF 344
+ + + NA + +AKCG + A +F + S T+ SW ++I G A ++
Sbjct: 425 EFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAH 484
Query: 345 DEMVEQGVEPDDVSFIGVLSACCHSKLVDKGR 376
+M G+ PD + +LSAC K + G+
Sbjct: 485 LQMKISGLLPDSFTVCSLLSACSKLKSLRLGK 516
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 101/234 (43%), Gaps = 7/234 (2%)
Query: 211 VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM-QVMGVCPDEITMVSVLTACADLG 269
VFD + W+A+I Y+R + F EM + PD T V+ ACA +
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 270 ALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIV 329
+ +G + + + + V + NAL+ + G V A+ LF M +VSW S+I
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261
Query: 330 GLAMHGRGSEAVSLFDEMVEQGVE----PDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
+ +G E+ L EM+E+ + PD + + VL C + + G+ +
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKG-VHGWAVK 320
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGE 439
+ ++ ++D+ S+ G + A + M N + W +++ A G+
Sbjct: 321 LRLDKELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMVGGFSAEGD 373
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Query: 292 LCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVE-Q 350
LC +I M+A CG D + +F + S + W +VI + + E + F EM+
Sbjct: 122 LCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTT 181
Query: 351 GVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKE 410
+ PD ++ V+ AC V G + + + G+V + +V GFV +
Sbjct: 182 DLLPDHFTYPCVIKACAGMSDVGIGLA-VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTD 240
Query: 411 ALDFVRTMPVEPNQIIWRSII 431
AL MP E N + W S+I
Sbjct: 241 ALQLFDIMP-ERNLVSWNSMI 260
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/518 (39%), Positives = 298/518 (57%), Gaps = 13/518 (2%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+N++I A+ K + L +++ ML GV P + L ACA L DL G+ +H
Sbjct: 305 WNSMIDAYVQNENPKEAML-IFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLS 363
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
V+ G D ++ V N++I MY A +F + V+W+AMI G
Sbjct: 364 VELGLDRNVSVVNSLISMYCKCKEVDT-----------AASMFGKLQSRTLVSWNAMILG 412
Query: 230 YARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKS 289
+A+ G A+ F +M+ V PD T VSV+TA A+L KW+ + + K+
Sbjct: 413 FAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKN 472
Query: 290 VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVE 349
V + AL+DM+AKCG + A +F M + +W ++I G HG G A+ LF+EM +
Sbjct: 473 VFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK 532
Query: 350 QGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVK 409
++P+ V+F+ V+SAC HS LV+ G F M+ N+ I ++HYG MVDLL RAG +
Sbjct: 533 GTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLN 592
Query: 410 EALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYA 469
EA DF+ MPV+P ++ +++ AC + E ++ L P +VLL+NIY
Sbjct: 593 EAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYR 652
Query: 470 KLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGR 529
WE+ +VR M +G++K PG +M+E+ NE+ F +G +H K+IY ++++
Sbjct: 653 AASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLIC 712
Query: 530 EIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCED 589
IK AGYVP T+ V L ++ + KE L HSEKLAI+F LLNT GT I + KNLRVC D
Sbjct: 713 HIKEAGYVPDTNLV-LGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCAD 771
Query: 590 CHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
CH+ATK+IS V REIVVRD RFHHFKNG CSCGD+W
Sbjct: 772 CHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 140/268 (52%), Gaps = 12/268 (4%)
Query: 109 LFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGS 168
L++T+++ FA + LQ + M V P + + ++LK C ++LR+GK +HG
Sbjct: 102 LYHTMLKGFAKVSDLDKA-LQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 169 VVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIG 228
+VK GF DL + +MY A KVFD P+ D V+W+ ++
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNE-----------ARKVFDRMPERDLVSWNTIVA 209
Query: 229 GYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPK 288
GY++ G + A+ + + M + P IT+VSVL A + L + +GK + Y
Sbjct: 210 GYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDS 269
Query: 289 SVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMV 348
V + AL+DM+AKCG ++ A LF M +VSW S+I + EA+ +F +M+
Sbjct: 270 LVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML 329
Query: 349 EQGVEPDDVSFIGVLSACCHSKLVDKGR 376
++GV+P DVS +G L AC +++GR
Sbjct: 330 DEGVKPTDVSVMGALHACADLGDLERGR 357
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 185/376 (49%), Gaps = 45/376 (11%)
Query: 101 RASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLR 160
R D +NT++ ++ ++ + L++ ++M + P+ T VL A + L +
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMA-LEMVKSMCEENLKPSFITIVSVLPAVSALRLIS 253
Query: 161 LGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDS 220
+GK +HG ++ GFD +++ ++ MY A ++FD + +
Sbjct: 254 VGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLET-----------ARQLFDGMLERNV 302
Query: 221 VTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESY 280
V+W++MI Y + + A+ +F++M GV P +++++ L ACADLG LE G+++
Sbjct: 303 VSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKL 362
Query: 281 IEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEA 340
+ ++V + N+LI M+ KC +VD A ++F ++ S T+VSW ++I+G A +GR +A
Sbjct: 363 SVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDA 422
Query: 341 VSLFDEMVEQGVEPDDVSFIGVLSACC------HSKLV---------DKG---RSYFNSM 382
++ F +M + V+PD +++ V++A H+K + DK + M
Sbjct: 423 LNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDM 482
Query: 383 EGNFGIV------------PKIEHYGCMVDLLSRAGFVKEALDFVRTM---PVEPNQIIW 427
G + + + M+D GF K AL+ M ++PN + +
Sbjct: 483 YAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTF 542
Query: 428 RSIITACHARGELKLG 443
S+I+AC G ++ G
Sbjct: 543 LSVISACSHSGLVEAG 558
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 129/301 (42%), Gaps = 20/301 (6%)
Query: 136 RYGVVPNKFTYP--FVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXX 193
R + N + +P +L+ C+ L +LR + V K G + Q ++ ++
Sbjct: 28 RNYIPANVYEHPAALLLERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCRYGS 84
Query: 194 XXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCP 253
A +VF+ +V + M+ G+A+ +A+ F M+ V P
Sbjct: 85 VDE-----------AARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEP 133
Query: 254 DEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLF 313
+L C D L +GK + + + L +M+AKC V++A +F
Sbjct: 134 VVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVF 193
Query: 314 RQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVD 373
+M +VSW +++ G + +G A+ + M E+ ++P ++ + VL A +L+
Sbjct: 194 DRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLIS 253
Query: 374 KGRSYFN-SMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIIT 432
G+ +M F + I +VD+ ++ G ++ A M +E N + W S+I
Sbjct: 254 VGKEIHGYAMRSGFDSLVNIS--TALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMID 310
Query: 433 A 433
A
Sbjct: 311 A 311
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/515 (39%), Positives = 298/515 (57%), Gaps = 15/515 (2%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D + TLI ++ + L + MLR+G PN+FT V+KA A G +
Sbjct: 125 DFVTWTTLISGYSQHDRP-CDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
HG VK GFD ++HV + ++ +Y A VFD + V+W+A
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDD-----------AQLVFDALESRNDVSWNA 232
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
+I G+ARR + +A+ LF+ M G P + S+ AC+ G LE GKW+ +Y+ K
Sbjct: 233 LIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM-IKS 291
Query: 286 IPKSVELC-NALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLF 344
K V N L+DM+AK G + A +F ++ +VSW S++ A HG G EAV F
Sbjct: 292 GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWF 351
Query: 345 DEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSR 404
+EM G+ P+++SF+ VL+AC HS L+D+G Y+ M+ + GIVP+ HY +VDLL R
Sbjct: 352 EEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGR 410
Query: 405 AGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLL 464
AG + AL F+ MP+EP IW++++ AC +LG ++ + +P +V+L
Sbjct: 411 AGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVIL 470
Query: 465 SNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMV 524
NIYA RW +VR+ M G+KK P + +E+ N + FVA D+ H Q ++I
Sbjct: 471 YNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKW 530
Query: 525 DEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNL 584
+E+ +IK GYVP TS V++ +D++++E L HSEK+A+AFALLNTPPG+ I I KN+
Sbjct: 531 EEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNI 590
Query: 585 RVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNG 619
RVC DCH+A K SKV REI+VRD NRFHHFK+
Sbjct: 591 RVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDA 625
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 147/331 (44%), Gaps = 44/331 (13%)
Query: 146 YPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXX 205
Y +LK C L G+ VH +++ F D+ + NT+++MY
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEE--------- 113
Query: 206 XLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTAC 265
A KVF++ P+ D VTW+ +I GY++ A+ F +M G P+E T+ SV+ A
Sbjct: 114 --ARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAA 171
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
A G L + +V + +AL+D++ + G +D A +F ++S VSW
Sbjct: 172 AAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWN 231
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM--- 382
++I G A +A+ LF M+ G P S+ + AC + +++G+ M
Sbjct: 232 ALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS 291
Query: 383 -------EGN------------------FGIVPK--IEHYGCMVDLLSRAGFVKEAL--- 412
GN F + K + + ++ ++ GF KEA+
Sbjct: 292 GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWF 351
Query: 413 DFVRTMPVEPNQIIWRSIITACHARGELKLG 443
+ +R + + PN+I + S++TAC G L G
Sbjct: 352 EEMRRVGIRPNEISFLSVLTACSHSGLLDEG 382
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 111/252 (44%), Gaps = 21/252 (8%)
Query: 260 SVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSC 319
++L C L G+ + ++I + + N L++M+AKCG +++A +F +M
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 320 TIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSA-------CCHSKLV 372
V+WT++I G + H R +A+ F++M+ G P++ + V+ A CC +L
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL- 183
Query: 373 DKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIIT 432
+ G + ++DL +R G + +A V N + W ++I
Sbjct: 184 -------HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDA-QLVFDALESRNDVSWNALIA 235
Query: 433 ACHARGELKLGESISKELLRN--EPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMK 490
R + + + +LR+ P+H S Y L + EQ V M G K
Sbjct: 236 GHARRSGTEKALELFQGMLRDGFRPSHFS-YASLFGACSSTGFLEQGKWVHAYMIKSGEK 294
Query: 491 KV--PGSTMIEL 500
V G+T++++
Sbjct: 295 LVAFAGNTLLDM 306
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/523 (37%), Positives = 306/523 (58%), Gaps = 16/523 (3%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYG-VVPNKFTYPFVLKACAGLSDLRLGKAVHGS 168
+ LI + + + L+ M+ G V PN FT+ KAC LSD R+GK V G
Sbjct: 339 WTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQ 398
Query: 169 VVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIG 228
K G + V N++I M+ A + F+ + + V+++ +
Sbjct: 399 AFKRGLASNSSVANSVISMFVKSDRMED-----------AQRAFESLSEKNLVSYNTFLD 447
Query: 229 GYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPK 288
G R + +A L E+ + T S+L+ A++G++ G+ + S + +
Sbjct: 448 GTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSC 507
Query: 289 SVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMV 348
+ +CNALI M++KCG +D A +F M++ ++SWTS+I G A HG + F++M+
Sbjct: 508 NQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMI 567
Query: 349 EQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFV 408
E+GV+P++V+++ +LSAC H LV +G +FNSM + I PK+EHY CMVDLL RAG +
Sbjct: 568 EEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLL 627
Query: 409 KEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIY 468
+A +F+ TMP + + ++WR+ + AC +LG+ ++++L +P + Y+ LSNIY
Sbjct: 628 TDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIY 687
Query: 469 AKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMG 528
A +WE+ T++R M R + K G + IE+ +++ +F GD +H QIY+ +D +
Sbjct: 688 ACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLI 747
Query: 529 REIKRAGYVPTTSQVLLDIDEEDKEDA----LYKHSEKLAIAFALLNTPPGTPIRIVKNL 584
EIKR GYVP T VL ++EE+ E LY+HSEK+A+AF L++T P+R+ KNL
Sbjct: 748 TEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNL 807
Query: 585 RVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
RVC DCH+A K+IS V REIV+RD NRFHHFK+G CSC D+W
Sbjct: 808 RVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 130/246 (52%), Gaps = 18/246 (7%)
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFG-FDDDLHVQNTMI 185
++++ L G+VPN + Y V++AC+ + +G+ G ++K G F+ D+ V ++I
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209
Query: 186 HMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFRE 245
M+ A KVFD+ + + VTW+ MI + G A+ F +
Sbjct: 210 DMFVKGENSFEN----------AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLD 259
Query: 246 MQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKC-- 303
M + G D+ T+ SV +ACA+L L LGK L S+ + VE +L+DM+AKC
Sbjct: 260 MVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSA 317
Query: 304 -GDVDKAMNLFRQMDSCTIVSWTSVIVGLAMH-GRGSEAVSLFDEMVEQG-VEPDDVSFI 360
G VD +F +M+ +++SWT++I G + +EA++LF EM+ QG VEP+ +F
Sbjct: 318 DGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFS 377
Query: 361 GVLSAC 366
AC
Sbjct: 378 SAFKAC 383
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 168/402 (41%), Gaps = 60/402 (14%)
Query: 134 MLRYGVVP-NKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXX 192
M R G+ P + T+ +LK+C D RLGK VH +++F + D + N++I +Y
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 193 XXXXXXXXXXXXXXLAGKVFD---ESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVM 249
A VF+ K D V+WSAM+ Y G A+ +F E +
Sbjct: 112 DSAK-----------AEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLEL 160
Query: 250 GVCPDEITMVSVLTACADLGALELGKWLESYI-EWKKIPKSVELCNALIDMFAKC-GDVD 307
G+ P++ +V+ AC++ + +G+ ++ + V + +LIDMF K +
Sbjct: 161 GLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFE 220
Query: 308 KAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACC 367
A +F +M +V+WT +I G EA+ F +MV G E D + V SAC
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280
Query: 368 HSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSR----------------------- 404
+ + G+ +S G+V +E +VD+ ++
Sbjct: 281 ELENLSLGKQ-LHSWAIRSGLVDDVE--CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVM 337
Query: 405 ------AGFVK------EALDFVRTM----PVEPNQIIWRSIITACHARGELKLGESI-S 447
G++K EA++ M VEPN + S AC + ++G+ +
Sbjct: 338 SWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLG 397
Query: 448 KELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGM 489
+ R ++ S + +++ K R E + E + + +
Sbjct: 398 QAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNL 439
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/550 (36%), Positives = 314/550 (57%), Gaps = 45/550 (8%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+N +I + + + + L++ R M+ G+ ++FTYP V++ACA L+LGK VH V
Sbjct: 254 YNAMISGYVNRGFYQEA-LEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV 312
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
++ D H N+++ +Y A +F++ P D V+W+A++ G
Sbjct: 313 LRRE-DFSFHFDNSLVSLYYKCGKFDE-----------ARAIFEKMPAKDLVSWNALLSG 360
Query: 230 YARRGHSSRAVGLFREMQ--------VM-----------------------GVCPDEITM 258
Y GH A +F+EM+ +M G P +
Sbjct: 361 YVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAF 420
Query: 259 VSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDS 318
+ +CA LGA G+ + + S+ NALI M+AKCG V++A +FR M
Sbjct: 421 SGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC 480
Query: 319 CTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSY 378
VSW ++I L HG G+EAV +++EM+++G+ PD ++ + VL+AC H+ LVD+GR Y
Sbjct: 481 LDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKY 540
Query: 379 FNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARG 438
F+SME + I P +HY ++DLL R+G +A + ++P +P IW ++++ C G
Sbjct: 541 FDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHG 600
Query: 439 ELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMI 498
++LG + +L P H+ Y+LLSN++A +WE+ +VR++M RG+KK + I
Sbjct: 601 NMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWI 660
Query: 499 ELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDIDEED-KEDALY 557
E+ ++ F+ D SH + + +Y + ++G+E++R GYVP TS VL D++ + KED L
Sbjct: 661 EMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLT 720
Query: 558 KHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFK 617
HSEK+A+AF L+ PPGT IRI KNLR C DCH+ +F+S V R+I++RDR RFHHF+
Sbjct: 721 THSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFR 780
Query: 618 NGLCSCGDFW 627
NG CSCG+FW
Sbjct: 781 NGECSCGNFW 790
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 166/411 (40%), Gaps = 75/411 (18%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSD-LRLGKA 164
D ++N +I F+H S+ + L+ M G P+ FT+ VL A ++D +
Sbjct: 112 DTVMYNAMITGFSHNNDGYSA-INLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQ 170
Query: 165 VHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWS 224
H + +K G V N ++ +Y A KVFDE + D +W+
Sbjct: 171 FHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHS-------ARKVFDEILEKDERSWT 223
Query: 225 --------------------------------AMIGGYARRGHSSRAVGLFREMQVMGVC 252
AMI GY RG A+ + R M G+
Sbjct: 224 TMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIE 283
Query: 253 PDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNL 312
DE T SV+ ACA G L+LGK + +Y+ ++ S N+L+ ++ KCG D+A +
Sbjct: 284 LDEFTYPSVIRACATAGLLQLGKQVHAYV-LRREDFSFHFDNSLVSLYYKCGKFDEARAI 342
Query: 313 FRQMDSCTIVSWTSV-------------------------------IVGLAMHGRGSEAV 341
F +M + +VSW ++ I GLA +G G E +
Sbjct: 343 FEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGL 402
Query: 342 SLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDL 401
LF M +G EP D +F G + +C G+ Y + G + ++ +
Sbjct: 403 KLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL-KIGFDSSLSAGNALITM 461
Query: 402 LSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLR 452
++ G V+EA RTMP + + W ++I A G + +E+L+
Sbjct: 462 YAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQHGHGAEAVDVYEEMLK 511
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 163/395 (41%), Gaps = 77/395 (19%)
Query: 146 YPFVLKACAGL--SDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXX--- 200
Y L+ C L + L+L +AVHG+++ FGF H+ N +I +Y
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 201 -----------------XXXXXXLAGKVFDESP--KTDSVTWSAMIGGYARRGHSSRAVG 241
LA VF+++P D+V ++AMI G++ A+
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 242 LFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKS--VELCNALIDM 299
LF +M+ G PD T SVL A L A + + ++ + K + NAL+ +
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLA-LVADDEKQCVQFHAAALKSGAGYITSVSNALVSV 193
Query: 300 FAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSF 359
++KC ++ R+ +FDE++E+ D+ S+
Sbjct: 194 YSKCASSPSLLHSARK---------------------------VFDEILEK----DERSW 222
Query: 360 IGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTM- 418
+++ + D G M+ N +V Y M+ GF +EAL+ VR M
Sbjct: 223 TTMMTGYVKNGYFDLGEELLEGMDDNMKLVA----YNAMISGYVNRGFYQEALEMVRRMV 278
Query: 419 --PVEPNQIIWRSIITACHARGELKLGESISKELLRNE--PTHESNYVLLSNIYAKLRRW 474
+E ++ + S+I AC G L+LG+ + +LR E H N L ++Y K ++
Sbjct: 279 SSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNS--LVSLYYKCGKF 336
Query: 475 EQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVA 509
++ + E K+P ++ N + +V+
Sbjct: 337 DEARAIFE--------KMPAKDLVSWNALLSGYVS 363
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 383 bits (984), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/547 (38%), Positives = 306/547 (55%), Gaps = 27/547 (4%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVV-PNKFTYPFVLKACAGLSDLRLGKA 164
D +N++I F + L ++ MLR ++ P++FT VL ACA L L +GK
Sbjct: 242 DIVTWNSMISGFNQRGYDLRA-LDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQ 300
Query: 165 VHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXX-------------------- 204
+H +V GFD V N +I MY
Sbjct: 301 IHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKL 360
Query: 205 --XXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVL 262
A +F D V W+AMI GY + G A+ LFR M G P+ T+ ++L
Sbjct: 361 GDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAML 420
Query: 263 TACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCT-- 320
+ + L +L GK + SV + NALI M+AK G++ A F + C
Sbjct: 421 SVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAF-DLIRCERD 479
Query: 321 IVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFN 380
VSWTS+I+ LA HG EA+ LF+ M+ +G+ PD ++++GV SAC H+ LV++GR YF+
Sbjct: 480 TVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFD 539
Query: 381 SMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGEL 440
M+ I+P + HY CMVDL RAG ++EA +F+ MP+EP+ + W S+++AC +
Sbjct: 540 MMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNI 599
Query: 441 KLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIEL 500
LG+ ++ LL EP + Y L+N+Y+ +WE+ K+R+ M +KK G + IE+
Sbjct: 600 DLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEV 659
Query: 501 NNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHS 560
+++ F D +H + +IY + ++ EIK+ GYVP T+ VL D++EE KE L HS
Sbjct: 660 KHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHS 719
Query: 561 EKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGL 620
EKLAIAF L++TP T +RI+KNLRVC DCH+A KFISK+ REI+VRD RFHHFK+G
Sbjct: 720 EKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGF 779
Query: 621 CSCGDFW 627
CSC D+W
Sbjct: 780 CSCRDYW 786
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 182/410 (44%), Gaps = 62/410 (15%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D+ + T+I + + Q + +++ M++ G+ P +FT VL + A + GK V
Sbjct: 110 DSVSWTTMIVGYKNIGQYHKA-IRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKV 168
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYX--------------------XXXXXXXXXXXXXXXX 205
H +VK G ++ V N++++MY
Sbjct: 169 HSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQM 228
Query: 206 XLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM-QVMGVCPDEITMVSVLTA 264
LA F++ + D VTW++MI G+ +RG+ RA+ +F +M + + PD T+ SVL+A
Sbjct: 229 DLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSA 288
Query: 265 CADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKC--------------------- 303
CA+L L +GK + S+I S + NALI M+++C
Sbjct: 289 CANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIE 348
Query: 304 ------------GDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQG 351
GD+++A N+F + +V+WT++IVG HG EA++LF MV G
Sbjct: 349 GFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGG 408
Query: 352 VEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEA 411
P+ + +LS + G+ S + G + + ++ + ++AG + A
Sbjct: 409 QRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS-GEIYSVSVSNALITMYAKAGNITSA 467
Query: 412 LDFVRTMPVEPNQIIWRSIITAC----HARGELKLGESISKELLRNEPTH 457
+ E + + W S+I A HA L+L E++ E LR P H
Sbjct: 468 SRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLR--PDH 515
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 35/233 (15%)
Query: 212 FDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGAL 271
FD+ P+ DSV+W+ MI GY G +A+ + +M G+ P + T+ +VL + A +
Sbjct: 103 FDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCM 162
Query: 272 ELGKWLESYIEWKKIPKSVELCNALIDMFAKCGD-------------------------- 305
E GK + S+I + +V + N+L++M+AKCGD
Sbjct: 163 ETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALH 222
Query: 306 -----VDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQG-VEPDDVSF 359
+D AM F QM IV+W S+I G G A+ +F +M+ + PD +
Sbjct: 223 MQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTL 282
Query: 360 IGVLSACCH-SKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEA 411
VLSAC + KL + + + + F I + ++ + SR G V+ A
Sbjct: 283 ASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV--LNALISMYSRCGGVETA 333
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 87/206 (42%), Gaps = 31/206 (15%)
Query: 294 NALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVE 353
N ++ ++K GD+D F Q+ VSWT++IVG G+ +A+ + +MV++G+E
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 354 PDDVSFIGVLSACCHSKLVDKGRSYFN-----SMEGNFG--------------------- 387
P + VL++ ++ ++ G+ + + GN
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 388 ----IVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLG 443
+V I + M+ L + G + A+ M E + + W S+I+ + RG
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMA-ERDIVTWNSMISGFNQRGYDLRA 262
Query: 444 ESISKELLRNEPTHESNYVLLSNIYA 469
I ++LR+ + L S + A
Sbjct: 263 LDIFSKMLRDSLLSPDRFTLASVLSA 288
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/570 (35%), Positives = 322/570 (56%), Gaps = 25/570 (4%)
Query: 63 GLINNPLV---LTKFAATSSTFNAIHYATSF-LFSDDPTTAPRASSFDAFLFNTLIRAFA 118
GL ++P + L +F A S T + H F F DP+T+ +N LIR F+
Sbjct: 32 GLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSD---------WNYLIRGFS 82
Query: 119 HTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDL 178
++ +S L R +L P+ FT+ F LK+C + + +HGSV++ GF DD
Sbjct: 83 NSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDA 142
Query: 179 HVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSR 238
V +++ Y +A KVFDE P D V+W+ MI ++ G ++
Sbjct: 143 IVATSLVRCYSANGSVE-----------IASKVFDEMPVRDLVSWNVMICCFSHVGLHNQ 191
Query: 239 AVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALID 298
A+ +++ M GVC D T+V++L++CA + AL +G L + V + NALID
Sbjct: 192 ALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALID 251
Query: 299 MFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVS 358
M+AKCG ++ A+ +F M +++W S+I+G +HG G EA+S F +MV GV P+ ++
Sbjct: 252 MYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAIT 311
Query: 359 FIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTM 418
F+G+L C H LV +G +F M F + P ++HYGCMVDL RAG ++ +L+ +
Sbjct: 312 FLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYAS 371
Query: 419 PVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKT 478
+ ++WR+++ +C L+LGE K+L++ E + +YVL+++IY+ +
Sbjct: 372 SCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFA 431
Query: 479 KVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVP 538
+R+++ ++ VPG + IE+ +++ +FV DK H + IY + E+ AGY P
Sbjct: 432 SMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKP 491
Query: 539 TTS-QVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFI 597
S + + + A HSEKLAIA+ L+ T GT +RI KNLRVC DCHS TK++
Sbjct: 492 EDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYV 551
Query: 598 SKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
SK +NREI+VRDR RFHHF +G+CSC D+W
Sbjct: 552 SKAFNREIIVRDRVRFHHFADGICSCNDYW 581
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/523 (37%), Positives = 297/523 (56%), Gaps = 13/523 (2%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDL-RLGKA 164
D +N LI +A + L ++TM GV N T VL AC DL GK
Sbjct: 427 DVVAWNALIGGYAE-DEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKP 485
Query: 165 VHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWS 224
+H +V GF+ D HV+N++I MY + +F+ + +TW+
Sbjct: 486 LHAYIVSAGFESDEHVKNSLITMYAKCGDLSS-----------SQDLFNGLDNRNIITWN 534
Query: 225 AMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWK 284
AM+ A GH + L +M+ GV D+ + L+A A L LE G+ L
Sbjct: 535 AMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKL 594
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLF 344
+ NA DM++KCG++ + + + + ++ SW +I L HG E + F
Sbjct: 595 GFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATF 654
Query: 345 DEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSR 404
EM+E G++P V+F+ +L+AC H LVDKG +Y++ + +FG+ P IEH C++DLL R
Sbjct: 655 HEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGR 714
Query: 405 AGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLL 464
+G + EA F+ MP++PN ++WRS++ +C G L G ++ L + EP +S YVL
Sbjct: 715 SGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLS 774
Query: 465 SNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMV 524
SN++A RWE VR+ M + +KK + ++L +++ F GD++H Q +IY +
Sbjct: 775 SNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKL 834
Query: 525 DEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNL 584
+++ + IK +GYV TSQ L D DEE KE L+ HSE+LA+A+AL++TP G+ +RI KNL
Sbjct: 835 EDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNL 894
Query: 585 RVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
R+C DCHS KF+S+V R IV+RD+ RFHHF+ GLCSC D+W
Sbjct: 895 RICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 185/415 (44%), Gaps = 49/415 (11%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +N+L+ +F + +S + L L +M+ G N T+ L AC G+ +
Sbjct: 326 DLISWNSLMASFVNDGRSLDA-LGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRIL 384
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
HG VV G + + N ++ MY +V + P+ D V W+A
Sbjct: 385 HGLVVVSGLFYNQIIGNALVSMYGKIGEMSESR-----------RVLLQMPRRDVVAWNA 433
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLG-ALELGKWLESYIEWK 284
+IGGYA +A+ F+ M+V GV + IT+VSVL+AC G LE GK L +YI
Sbjct: 434 LIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA 493
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLF 344
+ N+LI M+AKCGD+ + +LF +D+ I++W +++ A HG G E + L
Sbjct: 494 GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLV 553
Query: 345 DEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSY---------------FNSME------ 383
+M GV D SF LSA ++++G+ FN+
Sbjct: 554 SKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKC 613
Query: 384 GNFGIVPK---------IEHYGCMVDLLSRAGFVKE---ALDFVRTMPVEPNQIIWRSII 431
G G V K + + ++ L R G+ +E + M ++P + + S++
Sbjct: 614 GEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLL 673
Query: 432 TACHARGELKLGESISKELLRN---EPTHESNYVLLSNIYAKLRRWEQKTKVREM 483
TAC G + G + + R+ EP E ++ + R E +T + +M
Sbjct: 674 TACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKM 728
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 142/317 (44%), Gaps = 39/317 (12%)
Query: 128 LQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHM 187
+ +Y+ M GV N+ + V+ +C L D LG+ + G VVK G + L V+N++I M
Sbjct: 145 IDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISM 204
Query: 188 YXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQ 247
A +FD+ + D+++W+++ YA+ GH + FR
Sbjct: 205 LGSMGNVD-----------YANYIFDQMSERDTISWNSIAAAYAQNGHIEES---FRIFS 250
Query: 248 VMGVCPDEITMVSVLTACADLGALELGKW---LESYIEWKKIPKSVELCNALIDMFAKCG 304
+M DE+ +V T + LG ++ KW + + V +CN L+ M+A G
Sbjct: 251 LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAG 310
Query: 305 DVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLS 364
+A +F+QM + ++SW S++ GR +A+ L M+ G + V+F L+
Sbjct: 311 RSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALA 370
Query: 365 ACCHSKLVDKGRS----------YFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDF 414
AC +KGR ++N + GN +V + + G + E+
Sbjct: 371 ACFTPDFFEKGRILHGLVVVSGLFYNQIIGN-----------ALVSMYGKIGEMSESRRV 419
Query: 415 VRTMPVEPNQIIWRSII 431
+ MP + + W ++I
Sbjct: 420 LLQMP-RRDVVAWNALI 435
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 142/314 (45%), Gaps = 26/314 (8%)
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACA-GLSDLRLGKAVHGSVVKFGFDDDLHVQNTMI 185
G++ +R M G+ P+ F ++ AC S R G VHG V K G D++V ++
Sbjct: 42 GMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAIL 101
Query: 186 HMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFRE 245
H+Y + KVF+E P + V+W++++ GY+ +G + +++
Sbjct: 102 HLYGVYGLVS-----------CSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKG 150
Query: 246 MQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGD 305
M+ GV +E +M V+++C L LG+ + + + + + N+LI M G+
Sbjct: 151 MRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGN 210
Query: 306 VDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSA 365
VD A +F QM +SW S+ A +G E+ +F M E + + +LS
Sbjct: 211 VDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSV 270
Query: 366 CCHSKLVDKGRSYFNSMEGNFGIVPKI--EHYGCMVDLLSR----AGFVKEALDFVRTMP 419
H GR G G+V K+ + C+ + L R AG EA + MP
Sbjct: 271 LGHVDHQKWGR-------GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 323
Query: 420 VEPNQIIWRSIITA 433
+ + I W S++ +
Sbjct: 324 TK-DLISWNSLMAS 336
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 110/235 (46%), Gaps = 3/235 (1%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A +FD P + V+W+ M+ G R G + FR+M +G+ P + S++TAC
Sbjct: 11 ARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGR 70
Query: 268 LGAL-ELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTS 326
G++ G + ++ + V + A++ ++ G V + +F +M +VSWTS
Sbjct: 71 SGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTS 130
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNF 386
++VG + G E + ++ M +GV ++ S V+S+C K GR + +
Sbjct: 131 LMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS- 189
Query: 387 GIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELK 441
G+ K+ ++ +L G V A +++ E + I W SI A G ++
Sbjct: 190 GLESKLAVENSLISMLGSMGNVDYA-NYIFDQMSERDTISWNSIAAAYAQNGHIE 243
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 381 bits (978), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/502 (38%), Positives = 300/502 (59%), Gaps = 12/502 (2%)
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIH 186
GL L+R M G P+++T V AGL + +G+ +HG +K+G + DL V +++ H
Sbjct: 75 GLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAH 134
Query: 187 MYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM 246
MY V P + V W+ +I G A+ G + L++ M
Sbjct: 135 MYMRNGKLQDGEI-----------VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMM 183
Query: 247 QVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDV 306
++ G P++IT V+VL++C+DL G+ + + V + ++LI M++KCG +
Sbjct: 184 KISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCL 243
Query: 307 DKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQ-GVEPDDVSFIGVLSA 365
A F + + V W+S+I HG+G EA+ LF+ M EQ +E ++V+F+ +L A
Sbjct: 244 GDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYA 303
Query: 366 CCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQI 425
C HS L DKG F+ M +G P ++HY C+VDLL RAG + +A +R+MP++ + +
Sbjct: 304 CSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIV 363
Query: 426 IWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMD 485
IW+++++AC+ ++ + + KE+L+ +P + YVLL+N++A +RW ++VR+ M
Sbjct: 364 IWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMR 423
Query: 486 MRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLL 545
+ +KK G + E E+ +F GD+S + K+IY + E+ E+K GY P T+ VL
Sbjct: 424 DKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLH 483
Query: 546 DIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREI 605
D+DEE+KE L +HSEKLA+AFAL+ P G PIRI+KNLRVC DCH A K+IS + NREI
Sbjct: 484 DMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREI 543
Query: 606 VVRDRNRFHHFKNGLCSCGDFW 627
+RD +RFHHF NG CSCGD+W
Sbjct: 544 TLRDGSRFHHFINGKCSCGDYW 565
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 132/282 (46%), Gaps = 9/282 (3%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A KVFDE P TW+AMI G + + + LFREM +G PDE T+ SV + A
Sbjct: 44 ARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAG 103
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSV 327
L ++ +G+ + Y + + + ++L M+ + G + + R M +V+W ++
Sbjct: 104 LRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTL 163
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG 387
I+G A +G + L+ M G P+ ++F+ VLS+C + +G+ ++ G
Sbjct: 164 IMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQ-IHAEAIKIG 222
Query: 388 IVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITAC--HARGELKLGES 445
+ ++ + S+ G + +A E ++++W S+I+A H +G+ E+
Sbjct: 223 ASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDE-DEVMWSSMISAYGFHGQGD----EA 277
Query: 446 ISKELLRNEPTH-ESNYVLLSNIYAKLRRWEQKTKVREMMDM 486
I E T+ E N V N+ K K E+ DM
Sbjct: 278 IELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDM 319
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 2/145 (1%)
Query: 294 NALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVE 353
N LI+ + + GD+ A +F +M + +W ++I GL E +SLF EM G
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 88
Query: 354 PDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALD 413
PD+ + V S + V G+ + +G+ + + + R G +++
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQ-IHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147
Query: 414 FVRTMPVEPNQIIWRSIITACHARG 438
+R+MPV N + W ++I G
Sbjct: 148 VIRSMPVR-NLVAWNTLIMGNAQNG 171
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/568 (36%), Positives = 323/568 (56%), Gaps = 30/568 (5%)
Query: 63 GLINNPLVLTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQ 122
G P VLT + + A +F ++P SS + +N LI + T
Sbjct: 83 GCETEPFVLTALISMYCKCGLVADARK-VFEENPQ-----SSQLSVCYNALISGY--TAN 134
Query: 123 SK-SSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQ 181
SK + ++R M GV + T ++ C L LG+++HG VK G D ++ V
Sbjct: 135 SKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVL 194
Query: 182 NTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVG 241
N+ I MY ++FDE P +TW+A+I GY++ G + +
Sbjct: 195 NSFITMYMKCGSVEA-----------GRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLE 243
Query: 242 LFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFA 301
L+ +M+ GVCPD T+VSVL++CA LGA ++G + +E +V + NA I M+A
Sbjct: 244 LYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYA 303
Query: 302 KCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIG 361
+CG++ KA +F M ++VSWT++I MHG G + LFD+M+++G+ PD F+
Sbjct: 304 RCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVM 363
Query: 362 VLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVE 421
VLSAC HS L DKG F +M+ + + P EHY C+VDLL RAG + EA++F+ +MPVE
Sbjct: 364 VLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVE 423
Query: 422 PNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVR 481
P+ +W +++ AC + + E +++ EP + YVL+SNIY+ + E ++R
Sbjct: 424 PDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIR 483
Query: 482 EMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREI-KRAGYVPTT 540
MM R +K PG + +E + F+AGD+SH+Q ++++ M+DE+ + + AG
Sbjct: 484 VMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGN---- 539
Query: 541 SQVLLDIDE-EDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFISK 599
+D D E+ +HSE+LAIAF +LN+ PGT I ++KNLRVCEDCH K +SK
Sbjct: 540 ----MDCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSK 595
Query: 600 VYNREIVVRDRNRFHHFKNGLCSCGDFW 627
+ +R+ VVRD +RFH+FK+G+CSC D+W
Sbjct: 596 IVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 169/351 (48%), Gaps = 28/351 (7%)
Query: 107 AFLFNTLIRAFAHTPQSK-----------SSGLQLYRTMLRYGVVPNKFTYPFVLKACAG 155
+F+ N+ + A A TP + S + LYR+MLR G P+ F++PF+LK+CA
Sbjct: 6 SFVRNSAVAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCAS 65
Query: 156 LSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDES 215
LS G+ +H V K G + + V +I MY A KVF+E+
Sbjct: 66 LSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVAD-----------ARKVFEEN 114
Query: 216 PKTD--SVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALEL 273
P++ SV ++A+I GY + A +FR M+ GV D +TM+ ++ C L L
Sbjct: 115 PQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWL 174
Query: 274 GKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAM 333
G+ L + V + N+ I M+ KCG V+ LF +M +++W +VI G +
Sbjct: 175 GRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQ 234
Query: 334 HGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIE 393
+G + + L+++M GV PD + + VLS+C H G +E N G VP +
Sbjct: 235 NGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESN-GFVPNVF 293
Query: 394 HYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIIT--ACHARGELKL 442
+ + +R G + +A MPV+ + + W ++I H GE+ L
Sbjct: 294 VSNASISMYARCGNLAKARAVFDIMPVK-SLVSWTAMIGCYGMHGMGEIGL 343
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/567 (36%), Positives = 320/567 (56%), Gaps = 38/567 (6%)
Query: 91 LFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVL 150
LF + P S D + TL+ +F+ +S ++L+ M R V + + +
Sbjct: 65 LFDEIPL-----SEKDNVDWTTLLSSFSRYGLLVNS-MKLFVEMRRKRVEIDDVSVVCLF 118
Query: 151 KACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMY--------------------XX 190
CA L DL + HG VK G + V N ++ MY
Sbjct: 119 GVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVV 178
Query: 191 XXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQV-M 249
+VF E P+ ++V W+ M+ GY G + + L EM
Sbjct: 179 SWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRC 238
Query: 250 GVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVE-------LCNALIDMFAK 302
G + +T+ S+L+ACA G L +G+W+ Y K++ E + AL+DM+AK
Sbjct: 239 GHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAK 298
Query: 303 CGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGV 362
CG++D +MN+FR M +V+W ++ GLAMHG+G + +F +M+ + V+PDD++F V
Sbjct: 299 CGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAV 357
Query: 363 LSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEP 422
LSAC HS +VD+G F+S+ +G+ PK++HY CMVDLL RAG ++EA +R MPV P
Sbjct: 358 LSACSHSGIVDEGWRCFHSLR-FYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPP 416
Query: 423 NQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVRE 482
N+++ S++ +C G++++ E I +EL++ P + +L+SN+Y R + +R
Sbjct: 417 NEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRG 476
Query: 483 MMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQ 542
+ RG++K+PG + I +N+ + F +GD+SH + K+IY ++E+ I+ AGYVP S
Sbjct: 477 SLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSG 536
Query: 543 VL--LDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKV 600
++ + D E+KE AL HSEKLA+ F LL T P TP+ + KNLR+C DCHSA K +SKV
Sbjct: 537 LVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKV 596
Query: 601 YNREIVVRDRNRFHHFKNGLCSCGDFW 627
Y+REI++RDRNRFH FK G CSC D+W
Sbjct: 597 YDREIIIRDRNRFHQFKGGSCSCSDYW 623
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 166/402 (41%), Gaps = 81/402 (20%)
Query: 148 FVLKACAGLSDLRLGKAVHGSVVKFGFDD--DLHVQNTMIHMYXXXXXXXXXXXXXXXXX 205
+L+ CA S LR GK +H + G ++ N + Y
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVT--------- 61
Query: 206 XLAGKVFDESP--KTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLT 263
A K+FDE P + D+V W+ ++ ++R G ++ LF EM+ V D++++V +
Sbjct: 62 --AQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFG 119
Query: 264 ACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVS 323
CA L L + + SV++CNAL+DM+ KCG V + +F +++ ++VS
Sbjct: 120 VCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVS 179
Query: 324 WTSVIVGLAMHGRGSEAVSLFDEMVE-QGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM 382
WT V+ D +V+ +G+E +GR F+ M
Sbjct: 180 WTVVL----------------DTVVKWEGLE--------------------RGREVFHEM 203
Query: 383 EGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEP----NQIIWRSIITACHARG 438
+ + MV AGF +E L+ + M N + S+++AC G
Sbjct: 204 PERNAVA-----WTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSG 258
Query: 439 ELKLGE-----SISKELLRNEPTHESNYVL---LSNIYAKLRRWEQKTKVREMMDMRGMK 490
L +G ++ KE++ E + ++ L ++YAK + V +M R
Sbjct: 259 NLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKR--- 315
Query: 491 KVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIK 532
++ N +G H + + + +M +M RE+K
Sbjct: 316 -----NVVTWN----ALFSGLAMHGKGRMVIDMFPQMIREVK 348
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/509 (37%), Positives = 297/509 (58%), Gaps = 18/509 (3%)
Query: 123 SKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQN 182
S L +Y ML + P F+ LKAC L DLR+G+ +H +VK D V N
Sbjct: 216 SPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYN 275
Query: 183 TMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGL 242
++ +Y A KVFD + + VTW+++I +++ L
Sbjct: 276 VLLKLYMESGLFDD-----------ARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNL 324
Query: 243 FREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAK 302
FR+MQ + T+ ++L AC+ + AL GK + + I K V L N+L+DM+ K
Sbjct: 325 FRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGK 384
Query: 303 CGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGV 362
CG+V+ + +F M + + SW ++ A++G E ++LF+ M+E GV PD ++F+ +
Sbjct: 385 CGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVAL 444
Query: 363 LSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEP 422
LS C + L + G S F M+ F + P +EHY C+VD+L RAG +KEA+ + TMP +P
Sbjct: 445 LSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKP 504
Query: 423 NQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVRE 482
+ IW S++ +C G + +GE +KEL EP + NYV++SNIYA + W+ K+RE
Sbjct: 505 SASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIRE 564
Query: 483 MMDMRGMKKVPGSTMIELNNEMCEFVAGD----KSHDQYKQIYEMVDEMGREIKRAGYVP 538
MM RG+KK G + +++ +++ FVAG ++ D+YK+++ E+ I+++GY P
Sbjct: 565 MMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWT---ELQEAIEKSGYSP 621
Query: 539 TTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFIS 598
TS VL D+DEE K + + HSE+LA ++L++T G PIRI KNLRVC DCHS K +S
Sbjct: 622 NTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVS 681
Query: 599 KVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
+V R IV+RD RFHHF +G+CSC D+W
Sbjct: 682 QVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/519 (37%), Positives = 299/519 (57%), Gaps = 13/519 (2%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+ ++I +A + ++L+ M G+ P+ +T VL CA L GK VH +
Sbjct: 365 YTSMIAGYAREGLA-GEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 423
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
+ D+ V N ++ MY A VF E D ++W+ +IGG
Sbjct: 424 KENDLGFDIFVSNALMDMYAKCGSMQE-----------AELVFSEMRVKDIISWNTIIGG 472
Query: 230 YARRGHSSRAVGLFREM-QVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPK 288
Y++ +++ A+ LF + + PDE T+ VL ACA L A + G+ + YI
Sbjct: 473 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 532
Query: 289 SVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMV 348
+ N+L+DM+AKCG + A LF + S +VSWT +I G MHG G EA++LF++M
Sbjct: 533 DRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR 592
Query: 349 EQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFV 408
+ G+E D++SF+ +L AC HS LVD+G +FN M I P +EHY C+VD+L+R G +
Sbjct: 593 QAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDL 652
Query: 409 KEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIY 468
+A F+ MP+ P+ IW +++ C ++KL E +++++ EP + YVL++NIY
Sbjct: 653 IKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIY 712
Query: 469 AKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMG 528
A+ +WEQ ++R+ + RG++K PG + IE+ + FVAGD S+ + + I + ++
Sbjct: 713 AEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVR 772
Query: 529 REIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCE 588
+ GY P T L+D +E +KE+AL HSEKLA+A ++++ G IR+ KNLRVC
Sbjct: 773 ARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCG 832
Query: 589 DCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
DCH KF+SK+ REIV+RD NRFH FK+G CSC FW
Sbjct: 833 DCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 186/402 (46%), Gaps = 50/402 (12%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +N++I + ++ GL ++ ML G+ + T V CA + LG+AV
Sbjct: 260 DVISWNSIINGYVSNGLAEK-GLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAV 318
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H VK F + NT++ MY A VF E V++++
Sbjct: 319 HSIGVKACFSREDRFCNTLLDMYSKCGDLDS-----------AKAVFREMSDRSVVSYTS 367
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
MI GYAR G + AV LF EM+ G+ PD T+ +VL CA L+ GK + +I+
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEND 427
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
+ + + NAL+DM+AKCG + +A +F +M I+SW ++I G + + +EA+SLF+
Sbjct: 428 LGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN 487
Query: 346 EMVEQG-VEPDDVSFIGVLSACCHSKLVDKGR---------SYFNSMEGNFGIVPKIEHY 395
++E+ PD+ + VL AC DKGR YF+ +V
Sbjct: 488 LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKC 547
Query: 396 GCMV------------DLLSRA---------GFVKEALDF---VRTMPVEPNQIIWRSII 431
G ++ DL+S GF KEA+ +R +E ++I + S++
Sbjct: 548 GALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLL 607
Query: 432 TACHARGELKLGE---SISKELLRNEPTHESNYVLLSNIYAK 470
AC G + G +I + + EPT E +Y + ++ A+
Sbjct: 608 YACSHSGLVDEGWRFFNIMRHECKIEPTVE-HYACIVDMLAR 648
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 176/392 (44%), Gaps = 25/392 (6%)
Query: 94 DDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKAC 153
D TT R+ + DA NT +R F + +++ ++L ++ + P T VL+ C
Sbjct: 52 DSITTFDRSVT-DA---NTQLRRFCESGNLENA-VKLLCVSGKWDIDPR--TLCSVLQLC 104
Query: 154 AGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFD 213
A L+ GK V + GF D ++ + + MY A +VFD
Sbjct: 105 ADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKE-----------ASRVFD 153
Query: 214 ESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALEL 273
E ++ W+ ++ A+ G S ++GLF++M GV D T V + + L ++
Sbjct: 154 EVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHG 213
Query: 274 GKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAM 333
G+ L +I + + N+L+ + K VD A +F +M ++SW S+I G
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273
Query: 334 HGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIE 393
+G + +S+F +M+ G+E D + + V + C S+L+ GR+ +S+ +
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRA-VHSIGVKACFSREDR 332
Query: 394 HYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISK-ELLR 452
++D+ S+ G + A R M ++ + + A +AR L GE++ E +
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMS--DRSVVSYTSMIAGYAREGLA-GEAVKLFEEME 389
Query: 453 NEPTHESNYVLLS--NIYAKLRRWEQKTKVRE 482
E Y + + N A+ R ++ +V E
Sbjct: 390 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/521 (36%), Positives = 299/521 (57%), Gaps = 45/521 (8%)
Query: 141 PNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXX 200
P+ F + ++KACA L + G+ VH + + +D V+++++ MY
Sbjct: 103 PDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNS---- 158
Query: 201 XXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCP------- 253
A VFD ++++W+AM+ GYA+ G A+ LFR + V +
Sbjct: 159 -------AKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISG 211
Query: 254 -------------------------DEITMVSVLTACADLGALELGKWLESYIEWKKIPK 288
D + + S++ ACA+L A G+ + +
Sbjct: 212 FVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDS 271
Query: 289 SVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMV 348
V + NALIDM+AKC DV A ++F +M +VSWTS+IVG+A HG+ +A++L+D+MV
Sbjct: 272 CVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMV 331
Query: 349 EQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFV 408
GV+P++V+F+G++ AC H V+KGR F SM ++GI P ++HY C++DLL R+G +
Sbjct: 332 SHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLL 391
Query: 409 KEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHE-SNYVLLSNI 467
EA + + TMP P++ W ++++AC +G ++G I+ L+ + + S Y+LLSNI
Sbjct: 392 DEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNI 451
Query: 468 YAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEM 527
YA W + ++ R + ++K PG + +E+ E F AG+ SH + I+ ++ ++
Sbjct: 452 YASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKL 511
Query: 528 GREIK-RAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRV 586
E++ R GYVP TS +L D+DE++KE L+ HSE+ A+A+ LL PGTPIRIVKNLRV
Sbjct: 512 EEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRV 571
Query: 587 CEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
C DCH K IS++ REI+VRD R+HHFK G CSC DFW
Sbjct: 572 CGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 146 YPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXX 205
Y L+ CA L KA+H +VK G + NT++++Y
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASH--------- 56
Query: 206 XLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVC-PDEITMVSVLTA 264
A +VFDE P D + W++++ + S + + +F + PD+ +++ A
Sbjct: 57 --ALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKA 114
Query: 265 CADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSW 324
CA+LG+++ G+ + + + + ++L+DM+AKCG ++ A +F + +SW
Sbjct: 115 CANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISW 174
Query: 325 TSVIVGLAMHGRGSEAVSLF 344
T+++ G A GR EA+ LF
Sbjct: 175 TAMVSGYAKSGRKEEALELF 194
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 11/177 (6%)
Query: 262 LTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTI 321
L CA L K L ++I I + L N L++++ KCG A+ +F +M
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 322 VSWTSVIVGLAMHG-RGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRS--- 377
++W SV+ L G G+ PDD F ++ AC + +D GR
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 378 -YFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITA 433
+ S N +V +VD+ ++ G + A ++ V+ N I W ++++
Sbjct: 130 HFIVSEYANDEVVK-----SSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSG 180
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/501 (38%), Positives = 282/501 (56%), Gaps = 11/501 (2%)
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIH 186
GL + R V N TY L+ + L DL L VH +V+FGF+ ++ +I+
Sbjct: 221 GLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALIN 280
Query: 187 MYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM 246
MY A +VFD++ + + ++ Y + A+ LF +M
Sbjct: 281 MYGKCGKVL-----------YAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKM 329
Query: 247 QVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDV 306
V P+E T +L + A+L L+ G L + V + NAL++M+AK G +
Sbjct: 330 DTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSI 389
Query: 307 DKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSAC 366
+ A F M IV+W ++I G + HG G EA+ FD M+ G P+ ++FIGVL AC
Sbjct: 390 EDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQAC 449
Query: 367 CHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQII 426
H V++G YFN + F + P I+HY C+V LLS+AG K+A DF+RT P+E + +
Sbjct: 450 SHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVA 509
Query: 427 WRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDM 486
WR+++ AC+ R +LG+ +++ + P YVLLSNI+AK R WE KVR +M+
Sbjct: 510 WRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNN 569
Query: 487 RGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLLD 546
RG+KK PG + I + N+ F+A D H + IY V E+ +IK GY P + D
Sbjct: 570 RGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHD 629
Query: 547 IDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIV 606
+DEE +ED L HSEKLA+A+ L+ TP +P+ + KN+R+C+DCHSA K ISK+ R IV
Sbjct: 630 VDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIV 689
Query: 607 VRDRNRFHHFKNGLCSCGDFW 627
+RD NRFHHF +G CSC D+W
Sbjct: 690 IRDSNRFHHFLDGQCSCCDYW 710
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 138/312 (44%), Gaps = 14/312 (4%)
Query: 128 LQLYRTMLRYGVV-PNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIH 186
L+L+++M G PN+F V K+C+ + GK HG +K+G V+NT+++
Sbjct: 120 LKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVY 179
Query: 187 MYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM 246
MY A +V D+ P D +S+ + GY G + + R+
Sbjct: 180 MYSLCSGNGE-----------AIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKT 228
Query: 247 QVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDV 306
+ +T +S L ++L L L + S + VE C ALI+M+ KCG V
Sbjct: 229 ANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKV 288
Query: 307 DKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSAC 366
A +F + I T+++ EA++LF +M + V P++ +F +L++
Sbjct: 289 LYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSI 348
Query: 367 CHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQII 426
L+ +G + + G + +V++ +++G +++A M + +
Sbjct: 349 AELSLLKQG-DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVT 406
Query: 427 WRSIITACHARG 438
W ++I+ C G
Sbjct: 407 WNTMISGCSHHG 418
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 148/353 (41%), Gaps = 31/353 (8%)
Query: 139 VVPNKFTYPF-------VLKACAGLSDLRLGKAVHGSVV---KFGFDDDLHVQNTMIHMY 188
+VP PF +LK CA S LR+G+++H ++ + +D + N++I++Y
Sbjct: 20 LVPKSKKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLY 79
Query: 189 XXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQV 248
A K+FD P+ + V+W AM+ GY G + LF+ M
Sbjct: 80 VKCRETVR-----------ARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFF 128
Query: 249 MGVC-PDEITMVSVLTACADLGALELGKWLES-YIEWKKIPKSVELCNALIDMFAKCGDV 306
G P+E V +C++ G +E GK ++++ I + N L+ M++ C
Sbjct: 129 SGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEF-VRNTLVYMYSLCSGN 187
Query: 307 DKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSAC 366
+A+ + + C + ++S + G G E + + + + ++++++ L
Sbjct: 188 GEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLF 247
Query: 367 CHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAG---FVKEALDFVRTMPVEPN 423
+ + ++ + M FG ++E G ++++ + G + + D + N
Sbjct: 248 SNLRDLNLALQVHSRMV-RFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLN 306
Query: 424 QIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQ 476
I + L L SK + P +E + +L N A+L +Q
Sbjct: 307 TTIMDAYFQDKSFEEALNL---FSKMDTKEVPPNEYTFAILLNSIAELSLLKQ 356
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/504 (37%), Positives = 294/504 (58%), Gaps = 12/504 (2%)
Query: 125 SSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTM 184
+ + L+ M VVPN+FT +L CA LG+ +HG VVK GFD D++V N +
Sbjct: 330 NEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNAL 389
Query: 185 IHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFR 244
I +Y A K+F E + V+W+ +I GY G +A +FR
Sbjct: 390 IDVYAKCEKMDT-----------AVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFR 438
Query: 245 EMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCG 304
E V E+T S L ACA L +++LG + K V + N+LIDM+AKCG
Sbjct: 439 EALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCG 498
Query: 305 DVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLS 364
D+ A ++F +M++ + SW ++I G + HG G +A+ + D M ++ +P+ ++F+GVLS
Sbjct: 499 DIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLS 558
Query: 365 ACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQ 424
C ++ L+D+G+ F SM + GI P +EHY CMV LL R+G + +A+ + +P EP+
Sbjct: 559 GCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSV 618
Query: 425 IIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMM 484
+IWR++++A + + ++E+L+ P E+ YVL+SN+YA ++W +R+ M
Sbjct: 619 MIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSM 678
Query: 485 DMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVL 544
G+KK PG + IE ++ F G H K I M++ + + RAGYVP + VL
Sbjct: 679 KEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVL 738
Query: 545 LDIDEEDKEDALYKHSEKLAIAFALLNTPPG-TPIRIVKNLRVCEDCHSATKFISKVYNR 603
LD+D+E+K+ L+ HSE+LA+A+ L+ P I I+KNLR+C DCHSA K IS + R
Sbjct: 739 LDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQR 798
Query: 604 EIVVRDRNRFHHFKNGLCSCGDFW 627
++V+RD NRFHHF G+CSCGD W
Sbjct: 799 DLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 170/396 (42%), Gaps = 58/396 (14%)
Query: 128 LQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHM 187
L+L M G +PN +T+ LKA GL K VHG ++K + D V ++ +
Sbjct: 232 LKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQL 291
Query: 188 YXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQ 247
Y A KVF+E PK D V WS MI + + G + AV LF M+
Sbjct: 292 YTQLGDMSD-----------AFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMR 340
Query: 248 VMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVD 307
V P+E T+ S+L CA LG+ L + + + NALID++AKC +D
Sbjct: 341 EAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMD 400
Query: 308 KAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACC 367
A+ LF ++ S VSW +VIVG G G +A S+F E + V +V+F L AC
Sbjct: 401 TAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACA 460
Query: 368 HSKLVDKG-----------------------------------RSYFNSMEGNFGIVPKI 392
+D G +S FN ME +
Sbjct: 461 SLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME-----TIDV 515
Query: 393 EHYGCMVDLLSRAGFVKEA---LDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKE 449
+ ++ S G ++A LD ++ +PN + + +++ C G + G+ +
Sbjct: 516 ASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFES 575
Query: 450 LLRN---EPTHESNYVLLSNIYAKLRRWEQKTKVRE 482
++R+ EP E +Y + + + + ++ K+ E
Sbjct: 576 MIRDHGIEPCLE-HYTCMVRLLGRSGQLDKAMKLIE 610
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 131/327 (40%), Gaps = 13/327 (3%)
Query: 128 LQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHM 187
+ LY + R G N + LK L + +H +VK G+D + V +I+
Sbjct: 131 IGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINA 190
Query: 188 YXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQ 247
Y A VF+ D V W+ ++ Y G+ ++ L M+
Sbjct: 191 YSVCGSVDS-----------ARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMR 239
Query: 248 VMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVD 307
+ G P+ T + L A LGA + K + I + L+ ++ + GD+
Sbjct: 240 MAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMS 299
Query: 308 KAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACC 367
A +F +M +V W+ +I +G +EAV LF M E V P++ + +L+ C
Sbjct: 300 DAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA 359
Query: 368 HSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIW 427
K G + + G I ++D+ ++ + A+ + N++ W
Sbjct: 360 IGKCSGLGEQ-LHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELS-SKNEVSW 417
Query: 428 RSIITACHARGELKLGESISKELLRNE 454
++I GE S+ +E LRN+
Sbjct: 418 NTVIVGYENLGEGGKAFSMFREALRNQ 444
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 162/403 (40%), Gaps = 67/403 (16%)
Query: 139 VVP--NKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXX 196
++P + Y +L+ C +D KA+H ++K G DL N +++ Y
Sbjct: 43 IIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKD 102
Query: 197 XXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEI 256
A +FDE P+ ++V++ + GYA +GL+ + G +
Sbjct: 103 -----------ALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPH 147
Query: 257 TMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM 316
S L L E+ WL S I + + ALI+ ++ CG VD A +F +
Sbjct: 148 VFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGI 207
Query: 317 DSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSF-------IG-------- 361
IV W ++ +G +++ L M G P++ +F IG
Sbjct: 208 LCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAK 267
Query: 362 -----VLSAC-------------CHSKLVDKGRSY--FNSMEGNFGIVPKIEHYGCMVDL 401
+L C +++L D ++ FN M N +VP + M+
Sbjct: 268 GVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKN-DVVP----WSFMIAR 322
Query: 402 LSRAGFVKEALDF---VRTMPVEPNQIIWRSIITACHARGELKLGESISKELLR---NEP 455
+ GF EA+D +R V PN+ SI+ C LGE + +++ +
Sbjct: 323 FCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLD 382
Query: 456 THESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMI 498
+ SN ++ ++YAK + + T V+ ++ +V +T+I
Sbjct: 383 IYVSNALI--DVYAKCEKMD--TAVKLFAELSSKNEVSWNTVI 421
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/525 (37%), Positives = 302/525 (57%), Gaps = 17/525 (3%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRY-GVVPNKFTYPFVLKACAGLSDLRLGKA 164
D++ + ++ + Q + + L LY M R PN FT + A A + +R GK
Sbjct: 181 DSYSWTAMVTGYVKKDQPEEA-LVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKE 239
Query: 165 VHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWS 224
+HG +V+ G D D + ++++ MY A +FD+ + D V+W+
Sbjct: 240 IHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDE-----------ARNIFDKIVEKDVVSWT 288
Query: 225 AMIGGYARRGHSSRAVGLFREMQVMGVC--PDEITMVSVLTACADLGALELGKWLESYIE 282
+MI Y + LF E+ +G C P+E T VL ACADL ELGK + Y+
Sbjct: 289 SMIDRYFKSSRWREGFSLFSEL--VGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMT 346
Query: 283 WKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVS 342
++L+DM+ KCG+++ A ++ +VSWTS+I G A +G+ EA+
Sbjct: 347 RVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALK 406
Query: 343 LFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLL 402
FD +++ G +PD V+F+ VLSAC H+ LV+KG +F S+ + +HY C+VDLL
Sbjct: 407 YFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLL 466
Query: 403 SRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYV 462
+R+G ++ + MP++P++ +W S++ C G + L E ++EL + EP + YV
Sbjct: 467 ARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYV 526
Query: 463 LLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYE 522
++NIYA +WE++ K+R+ M G+ K PGS+ E+ + F+A D SH Y QI E
Sbjct: 527 TMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVE 586
Query: 523 MVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVK 582
+ E+ +++K GYVP TS VL D+++E KE+ L HSEKLA+AFA+L+T GT I++ K
Sbjct: 587 FLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFK 646
Query: 583 NLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
NLR C DCH A KFIS + R+I VRD RFH F+NG CSCGD+W
Sbjct: 647 NLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 140/320 (43%), Gaps = 23/320 (7%)
Query: 141 PNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXX- 199
P TY +++ C+ L GK VH + GF + + N ++ MY
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 200 -------------------XXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAV 240
A K+FDE + DS +W+AM+ GY ++ A+
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEAL 202
Query: 241 GLFREMQ-VMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDM 299
L+ MQ V P+ T+ + A A + + GK + +I + L ++L+DM
Sbjct: 203 VLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDM 262
Query: 300 FAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSF 359
+ KCG +D+A N+F ++ +VSWTS+I R E SLF E+V P++ +F
Sbjct: 263 YGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTF 322
Query: 360 IGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP 419
GVL+AC + G+ M G P +VD+ ++ G ++ A V P
Sbjct: 323 AGVLNACADLTTEELGKQVHGYMT-RVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP 381
Query: 420 VEPNQIIWRSIITACHARGE 439
+P+ + W S+I C G+
Sbjct: 382 -KPDLVSWTSLIGGCAQNGQ 400
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 242 LFRE-MQVMGVC--PDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALID 298
L RE +Q++G P T +++ C+ ALE GK + +I + + N L+
Sbjct: 69 LLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLR 128
Query: 299 MFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQ 350
M+AKCG + A +F +M + + SW ++ G A G EA LFDEM E+
Sbjct: 129 MYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK 180
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/528 (37%), Positives = 309/528 (58%), Gaps = 27/528 (5%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVP------NKFTYPFVLKACAGLSDLRLGK 163
+N +IR FA + S YR+ML+ + T F LKACA
Sbjct: 71 WNAIIRGFAGSSHP-SLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMD 129
Query: 164 AVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTW 223
+H + + G D + T++ Y A K+FDE P D +W
Sbjct: 130 QLHCQINRRGLSADSLLCTTLLDAYSKNGDLIS-----------AYKLFDEMPVRDVASW 178
Query: 224 SAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEW 283
+A+I G +S A+ L++ M+ G+ E+T+V+ L AC+ LG ++ G+ I
Sbjct: 179 NALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGE----NIFH 234
Query: 284 KKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSC-TIVSWTSVIVGLAMHGRGSEAVS 342
+V + NA IDM++KCG VDKA +F Q ++V+W ++I G A+HG A+
Sbjct: 235 GYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALE 294
Query: 343 LFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLL 402
+FD++ + G++PDDVS++ L+AC H+ LV+ G S FN+M G+ ++HYGC+VDLL
Sbjct: 295 IFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLL 353
Query: 403 SRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYV 462
SRAG ++EA D + +M + P+ ++W+S++ A ++++ E S+E+ ++ ++V
Sbjct: 354 SRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFV 413
Query: 463 LLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYE 522
LLSN+YA RW+ +VR+ M+ + +KK+PG + IE + EF DKSH+Q+++IYE
Sbjct: 414 LLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYE 473
Query: 523 MVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALL---NTPPGTPIR 579
+DE+ +I+ GYV T VL DI EE+KE+AL HSEKLA+A+ L+ +P+R
Sbjct: 474 KIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVR 533
Query: 580 IVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
++ NLR+C DCH K ISK+Y REI+VRDR RFH FK+G CSC DFW
Sbjct: 534 VINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 11/239 (4%)
Query: 207 LAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM-----QVMGVCP-DEITMVS 260
A ++F PK + W+A+I G+A H S A +R M +C D +T
Sbjct: 55 FAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSF 114
Query: 261 VLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCT 320
L ACA L I + + LC L+D ++K GD+ A LF +M
Sbjct: 115 TLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRD 174
Query: 321 IVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFN 380
+ SW ++I GL R SEA+ L+ M +G+ +V+ + L AC H V +G + F+
Sbjct: 175 VASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFH 234
Query: 381 SMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGE 439
+ IV +D+ S+ GFV +A + + + W ++IT GE
Sbjct: 235 GYSNDNVIVSN-----AAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGE 288
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/527 (36%), Positives = 294/527 (55%), Gaps = 17/527 (3%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDL-RLGKA 164
D +N LI +A + L ++TM GV N T VL AC DL GK
Sbjct: 410 DVVAWNALIGGYAE-DEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKP 468
Query: 165 VHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWS 224
+H +V GF+ D HV+N++I MY + +F+ + +TW+
Sbjct: 469 LHAYIVSAGFESDEHVKNSLITMYAKCGDLSS-----------SQDLFNGLDNRNIITWN 517
Query: 225 AMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWK 284
AM+ A GH + L +M+ GV D+ + L+A A L LE G+ L
Sbjct: 518 AMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKL 577
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLF 344
+ NA DM++KCG++ + + + + ++ SW +I L HG E + F
Sbjct: 578 GFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATF 637
Query: 345 DEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSR 404
EM+E G++P V+F+ +L+AC H LVDKG +Y++ + +FG+ P IEH C++DLL R
Sbjct: 638 HEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGR 697
Query: 405 AGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLL 464
+G + EA F+ MP++PN ++WRS++ +C G L G ++ L + EP +S YVL
Sbjct: 698 SGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLS 757
Query: 465 SNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMV 524
SN++A RWE VR+ M + +KK + ++L +++ F GD++H Q +IY +
Sbjct: 758 SNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKL 817
Query: 525 DEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNL 584
+++ + IK +GYV TSQ L D DEE KE L+ HSE+LA+A+AL++TP G+ +RI KNL
Sbjct: 818 EDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNL 877
Query: 585 RVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCG----DFW 627
R+C DCHS KF+S+V R IV+RD+ RFHHF+ GL G FW
Sbjct: 878 RICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLFGKGSGFQQFW 924
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 185/415 (44%), Gaps = 49/415 (11%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +N+L+ +F + +S + L L +M+ G N T+ L AC G+ +
Sbjct: 309 DLISWNSLMASFVNDGRSLDA-LGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRIL 367
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
HG VV G + + N ++ MY +V + P+ D V W+A
Sbjct: 368 HGLVVVSGLFYNQIIGNALVSMYGKIGEMSESR-----------RVLLQMPRRDVVAWNA 416
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLG-ALELGKWLESYIEWK 284
+IGGYA +A+ F+ M+V GV + IT+VSVL+AC G LE GK L +YI
Sbjct: 417 LIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA 476
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLF 344
+ N+LI M+AKCGD+ + +LF +D+ I++W +++ A HG G E + L
Sbjct: 477 GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLV 536
Query: 345 DEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSY---------------FNSME------ 383
+M GV D SF LSA ++++G+ FN+
Sbjct: 537 SKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKC 596
Query: 384 GNFGIVPK---------IEHYGCMVDLLSRAGFVKE---ALDFVRTMPVEPNQIIWRSII 431
G G V K + + ++ L R G+ +E + M ++P + + S++
Sbjct: 597 GEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLL 656
Query: 432 TACHARGELKLGESISKELLRN---EPTHESNYVLLSNIYAKLRRWEQKTKVREM 483
TAC G + G + + R+ EP E ++ + R E +T + +M
Sbjct: 657 TACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKM 711
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 142/317 (44%), Gaps = 39/317 (12%)
Query: 128 LQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHM 187
+ +Y+ M GV N+ + V+ +C L D LG+ + G VVK G + L V+N++I M
Sbjct: 128 IDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISM 187
Query: 188 YXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQ 247
A +FD+ + D+++W+++ YA+ GH + FR
Sbjct: 188 LGSMGNVD-----------YANYIFDQMSERDTISWNSIAAAYAQNGHIEES---FRIFS 233
Query: 248 VMGVCPDEITMVSVLTACADLGALELGKW---LESYIEWKKIPKSVELCNALIDMFAKCG 304
+M DE+ +V T + LG ++ KW + + V +CN L+ M+A G
Sbjct: 234 LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAG 293
Query: 305 DVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLS 364
+A +F+QM + ++SW S++ GR +A+ L M+ G + V+F L+
Sbjct: 294 RSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALA 353
Query: 365 ACCHSKLVDKGRS----------YFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDF 414
AC +KGR ++N + GN +V + + G + E+
Sbjct: 354 ACFTPDFFEKGRILHGLVVVSGLFYNQIIGN-----------ALVSMYGKIGEMSESRRV 402
Query: 415 VRTMPVEPNQIIWRSII 431
+ MP + + W ++I
Sbjct: 403 LLQMP-RRDVVAWNALI 418
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 142/314 (45%), Gaps = 26/314 (8%)
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACA-GLSDLRLGKAVHGSVVKFGFDDDLHVQNTMI 185
G++ +R M G+ P+ F ++ AC S R G VHG V K G D++V ++
Sbjct: 25 GMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAIL 84
Query: 186 HMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFRE 245
H+Y + KVF+E P + V+W++++ GY+ +G + +++
Sbjct: 85 HLYGVYGLVS-----------CSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKG 133
Query: 246 MQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGD 305
M+ GV +E +M V+++C L LG+ + + + + + N+LI M G+
Sbjct: 134 MRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGN 193
Query: 306 VDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSA 365
VD A +F QM +SW S+ A +G E+ +F M E + + +LS
Sbjct: 194 VDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSV 253
Query: 366 CCHSKLVDKGRSYFNSMEGNFGIVPKI--EHYGCMVDLLSR----AGFVKEALDFVRTMP 419
H GR G G+V K+ + C+ + L R AG EA + MP
Sbjct: 254 LGHVDHQKWGR-------GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 306
Query: 420 VEPNQIIWRSIITA 433
+ + I W S++ +
Sbjct: 307 TK-DLISWNSLMAS 319
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 106/227 (46%), Gaps = 3/227 (1%)
Query: 216 PKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGAL-ELG 274
P + V+W+ M+ G R G + FR+M +G+ P + S++TAC G++ G
Sbjct: 2 PVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREG 61
Query: 275 KWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMH 334
+ ++ + V + A++ ++ G V + +F +M +VSWTS++VG +
Sbjct: 62 VQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDK 121
Query: 335 GRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEH 394
G E + ++ M +GV ++ S V+S+C K GR + + G+ K+
Sbjct: 122 GEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS-GLESKLAV 180
Query: 395 YGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELK 441
++ +L G V A +++ E + I W SI A G ++
Sbjct: 181 ENSLISMLGSMGNVDYA-NYIFDQMSERDTISWNSIAAAYAQNGHIE 226
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/494 (38%), Positives = 300/494 (60%), Gaps = 32/494 (6%)
Query: 63 GLINNPLVLTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFA--HT 120
GL + L + KF S + YA S +F+ P + +L NT+IRA +
Sbjct: 42 GLNRDNLNVAKFIEACSNAGHLRYAYS-VFTHQPCP-------NTYLHNTMIRALSLLDE 93
Query: 121 PQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHV 180
P + S + +YR + P+ FT+PFVLK +SD+ G+ +HG VV FGFD +HV
Sbjct: 94 PNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHV 153
Query: 181 QNTMIHMY---------XXXXXXXXXXXXXXXXXXLAG--KV--FDESPKT--------- 218
+I MY LAG KV DE+
Sbjct: 154 VTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVR 213
Query: 219 DSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLE 278
+ V+W+ +I GYA+ G +S A+ +F+ M + V PDE+T+++VL+ACADLG+LELG+ +
Sbjct: 214 NEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERIC 273
Query: 279 SYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGS 338
SY++ + + ++V L NA+IDM+AK G++ KA+++F ++ +V+WT++I GLA HG G+
Sbjct: 274 SYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGA 333
Query: 339 EAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCM 398
EA+++F+ MV+ GV P+DV+FI +LSAC H VD G+ FNSM +GI P IEHYGCM
Sbjct: 334 EALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCM 393
Query: 399 VDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHE 458
+DLL RAG ++EA + +++MP + N IW S++ A + +L+LGE EL++ EP +
Sbjct: 394 IDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNS 453
Query: 459 SNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYK 518
NY+LL+N+Y+ L RW++ +R MM G+KK+ G + IE+ N + +F++GD +H Q +
Sbjct: 454 GNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVE 513
Query: 519 QIYEMVDEMGREIK 532
+I+E++ EM +I+
Sbjct: 514 RIHEILQEMDLQIQ 527
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/527 (39%), Positives = 305/527 (57%), Gaps = 16/527 (3%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +N++I A A + +S + + R G N+ T+ VL A + LS LGK +
Sbjct: 480 DQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQI 539
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDE-SPKTDSVTWS 224
HG +K D+ +N +I Y K+F + + D+VTW+
Sbjct: 540 HGLALKNNIADEATTENALIACYGKCGEMDGCE-----------KIFSRMAERRDNVTWN 588
Query: 225 AMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWK 284
+MI GY ++A+ L M G D +VL+A A + LE G + +
Sbjct: 589 SMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRA 648
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLF 344
+ V + +AL+DM++KCG +D A+ F M SW S+I G A HG+G EA+ LF
Sbjct: 649 CLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLF 708
Query: 345 DEMVEQG-VEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLS 403
+ M G PD V+F+GVLSAC H+ L+++G +F SM ++G+ P+IEH+ CM D+L
Sbjct: 709 ETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLG 768
Query: 404 RAGFVKEALDFVRTMPVEPNQIIWRSIITAC-HARG-ELKLGESISKELLRNEPTHESNY 461
RAG + + DF+ MP++PN +IWR+++ AC A G + +LG+ ++ L + EP + NY
Sbjct: 769 RAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNY 828
Query: 462 VLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIY 521
VLL N+YA RWE K R+ M +KK G + + + + + FVAGDKSH IY
Sbjct: 829 VLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIY 888
Query: 522 EMVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGT-PIRI 580
+ + E+ R+++ AGYVP T L D+++E+KE+ L HSEKLA+AF L T PIRI
Sbjct: 889 KKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRI 948
Query: 581 VKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
+KNLRVC DCHSA K+ISK+ R+I++RD NRFHHF++G CSC DFW
Sbjct: 949 MKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 154/326 (47%), Gaps = 19/326 (5%)
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIH 186
++ Y++M R+ ++P FT L +CA L +LG+ +HG +K G D ++ V N ++
Sbjct: 399 AVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMT 458
Query: 187 MYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHS-SRAVGLFRE 245
+Y K+F P+ D V+W+++IG AR S AV F
Sbjct: 459 LYAETGYLNECR-----------KIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLN 507
Query: 246 MQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGD 305
Q G + IT SVL+A + L ELGK + I NALI + KCG+
Sbjct: 508 AQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGE 567
Query: 306 VDKAMNLFRQM-DSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLS 364
+D +F +M + V+W S+I G + ++A+ L M++ G D + VLS
Sbjct: 568 MDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLS 627
Query: 365 ACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQ 424
A +++G ++ + + +VD+ S+ G + AL F TMPV N
Sbjct: 628 AFASVATLERGME-VHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR-NS 685
Query: 425 IIWRSIIT--ACHARGE--LKLGESI 446
W S+I+ A H +GE LKL E++
Sbjct: 686 YSWNSMISGYARHGQGEEALKLFETM 711
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H + K D D+++ N +I+ Y A KVFDE P + V+W+
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVS-----------ARKVFDEMPLRNCVSWAC 72
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALEL--GKWLESYIEW 283
++ GY+R G A+ R+M G+ ++ VSVL AC ++G++ + G+ + +
Sbjct: 73 IVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFK 132
Query: 284 KKIPKSVELCNALIDMFAKC-GDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVS 342
+ N LI M+ KC G V A+ F ++ VSW S+I + G A
Sbjct: 133 LSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFR 192
Query: 343 LFDEMVEQGVEPDDVSFIGVLSACC 367
+F M G P + +F +++ C
Sbjct: 193 IFSSMQYDGSRPTEYTFGSLVTTAC 217
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 149/337 (44%), Gaps = 26/337 (7%)
Query: 113 LIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACA--GLSDLRLGKAVHGSVV 170
++ ++ + K + L R M++ G+ N++ + VL+AC G + G+ +HG +
Sbjct: 73 IVSGYSRNGEHKEA-LVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMF 131
Query: 171 KFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGY 230
K + D V N +I MY A F + +SV+W+++I Y
Sbjct: 132 KLSYAVDAVVSNVLISMYWKCIGSVG----------YALCAFGDIEVKNSVSWNSIISVY 181
Query: 231 ARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGA--LELGKWLESYIEWKKIPK 288
++ G A +F MQ G P E T S++T L + L + + I+ +
Sbjct: 182 SQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLT 241
Query: 289 SVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMV 348
+ + + L+ FAK G + A +F QM++ V+ ++VGL G EA LF +M
Sbjct: 242 DLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN 301
Query: 349 EQ-GVEPDDVSFIGVLSACCHSKLVD-----KGRSYFNSMEGNFGIVPKIEHYG-CMVDL 401
V P+ S++ +LS+ L + KGR + G+V + G +V++
Sbjct: 302 SMIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITT-GLVDFMVGIGNGLVNM 358
Query: 402 LSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARG 438
++ G + +A M + + + W S+IT G
Sbjct: 359 YAKCGSIADARRVFYFM-TDKDSVSWNSMITGLDQNG 394
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 13/203 (6%)
Query: 159 LRLGKAVHGSVVKFGFDDDL-HVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPK 217
L+ G+ VHG V+ G D + + N +++MY A +VF
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIAD-----------ARRVFYFMTD 377
Query: 218 TDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWL 277
DSV+W++MI G + G AV ++ M+ + P T++S L++CA L +LG+ +
Sbjct: 378 KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQI 437
Query: 278 ESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRG 337
I +V + NAL+ ++A+ G +++ +F M VSW S+I LA R
Sbjct: 438 HGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERS 497
Query: 338 -SEAVSLFDEMVEQGVEPDDVSF 359
EAV F G + + ++F
Sbjct: 498 LPEAVVCFLNAQRAGQKLNRITF 520
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 259 VSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDS 318
+S + +C +G ++ S + ++ K V LCN LI+ + + GD A +F +M
Sbjct: 7 LSFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 319 CTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSAC 366
VSW ++ G + +G EA+ +MV++G+ + +F+ VL AC
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRAC 112
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 261/422 (61%), Gaps = 4/422 (0%)
Query: 207 LAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM-QVMGVCPDEITMVSVLTAC 265
LA KV + + +TW+ MIGGY R A+ + M + P++ + S L AC
Sbjct: 116 LAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAAC 175
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
A LG L KW+ S + I + L +AL+D++AKCGD+ + +F + + W
Sbjct: 176 ARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWN 235
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
++I G A HG +EA+ +F EM + V PD ++F+G+L+ C H L+++G+ YF M
Sbjct: 236 AMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRR 295
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGES 445
F I PK+EHYG MVDLL RAG VKEA + + +MP+EP+ +IWRS++++ +LGE
Sbjct: 296 FSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEI 355
Query: 446 ISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMC 505
+ L +YVLLSNIY+ ++WE KVRE+M G++K G + +E +
Sbjct: 356 AIQNL---SKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIH 412
Query: 506 EFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAI 565
F AGD SH + K IY++++ + ++ K G+V T VL+D+ EE+KE+ L HSEKLA+
Sbjct: 413 RFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLAL 472
Query: 566 AFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGD 625
A+ +L + PGT IRI KN+R+C DCH+ K +SK+ NR I++RDR RFH F++GLCSC D
Sbjct: 473 AYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRD 532
Query: 626 FW 627
+W
Sbjct: 533 YW 534
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 15/230 (6%)
Query: 102 ASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRY-GVVPNKFTYPFVLKACAGLSDLR 160
AS + +N +I + Q + + L+ + ML + + PNKF++ L ACA L DL
Sbjct: 124 ASDQNVITWNLMIGGYVRNVQYEEA-LKALKNMLSFTDIKPNKFSFASSLAACARLGDLH 182
Query: 161 LGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDS 220
K VH ++ G + + + + ++ +Y + +VF + D
Sbjct: 183 HAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGT-----------SREVFYSVKRNDV 231
Query: 221 VTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESY 280
W+AMI G+A G ++ A+ +F EM+ V PD IT + +LT C+ G LE GK
Sbjct: 232 SIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGL 291
Query: 281 IEWK-KIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD-SCTIVSWTSVI 328
+ + I +E A++D+ + G V +A L M +V W S++
Sbjct: 292 MSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/509 (37%), Positives = 289/509 (56%), Gaps = 16/509 (3%)
Query: 122 QSKSSG--LQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLH 179
Q++ SG L L++ MLR + + V+ ACA +G VHG ++K GF + +
Sbjct: 202 QNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEY 261
Query: 180 VQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRA 239
V ++I Y + KVFDE W+A++ GY+ A
Sbjct: 262 VSASLITFYANCKRIGD-----------SRKVFDEKVHEQVAVWTALLSGYSLNKKHEDA 310
Query: 240 VGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDM 299
+ +F M + P++ T S L +C+ LG L+ GK + + + N+L+ M
Sbjct: 311 LSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVM 370
Query: 300 FAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSF 359
++ G+V+ A+++F ++ +IVSW S+IVG A HGRG A +F +M+ EPD+++F
Sbjct: 371 YSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITF 430
Query: 360 IGVLSACCHSKLVDKGRSYFNSMEGNFG-IVPKIEHYGCMVDLLSRAGFVKEALDFVRTM 418
G+LSAC H ++KGR F M I KI+HY CMVD+L R G +KEA + + M
Sbjct: 431 TGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERM 490
Query: 419 PVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKT 478
V+PN+++W ++++AC ++ GE + + + + YVLLSNIYA RW +
Sbjct: 491 VVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVS 550
Query: 479 KVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVP 538
K+R M G+ K PGS+ + + + EF +GD+ H +IYE ++ + ++K GY P
Sbjct: 551 KLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPH--CSRIYEKLEFLREKLKELGYAP 608
Query: 539 TTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFIS 598
L D+++E KE+ L+ HSE+LAIAF L+NT G+ + ++KNLRVCEDCH+ K IS
Sbjct: 609 DYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLIS 668
Query: 599 KVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
V REIV+RD RFHHFKNG CSCGD+W
Sbjct: 669 GVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 85/163 (52%), Gaps = 10/163 (6%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A +FDE P D V+W++MI G G + AV LF EM V ++ +++ C
Sbjct: 85 ALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV----VSWTAMVNGCFR 140
Query: 268 LGALELGKWLESYIEWKKIP-KSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTS 326
G ++ + L + ++P K N+++ + + G VD A+ LF+QM ++SWT+
Sbjct: 141 SGKVDQAERL-----FYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTT 195
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHS 369
+I GL + R EA+ LF M+ ++ F V++AC ++
Sbjct: 196 MICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANA 238
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 117/261 (44%), Gaps = 6/261 (2%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A K+F + P + ++W+ MI G + S A+ LF+ M + V+TACA+
Sbjct: 178 ALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACAN 237
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSV 327
A +G + I + +LI +A C + + +F + + WT++
Sbjct: 238 APAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTAL 297
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG 387
+ G +++ + +A+S+F M+ + P+ +F L++C +D G+ + + G
Sbjct: 298 LSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKE-MHGVAVKLG 356
Query: 388 IVPKIEHYGCMVDLLSRAGFVKEALD-FVRTMPVEPNQIIWRSIITACHARGELKLGESI 446
+ +V + S +G V +A+ F++ + + + W SII C G K I
Sbjct: 357 LETDAFVGNSLVVMYSDSGNVNDAVSVFIKIF--KKSIVSWNSIIVGCAQHGRGKWAFVI 414
Query: 447 SKELLR--NEPTHESNYVLLS 465
+++R EP + LLS
Sbjct: 415 FGQMIRLNKEPDEITFTGLLS 435
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 290 VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVE 349
V L +I + + + A+NLF +M +VSW S+I G G + AV LFDEM E
Sbjct: 66 VSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPE 125
Query: 350 QGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVK 409
+ V VS+ +++ C S VD+ F M V + MV + G V
Sbjct: 126 RSV----VSWTAMVNGCFRSGKVDQAERLFYQMP-----VKDTAAWNSMVHGYLQFGKVD 176
Query: 410 EALDFVRTMPVEPNQIIWRSIITACHARGELKLGESIS--KELLR 452
+AL + MP N I W ++I C + GE++ K +LR
Sbjct: 177 DALKLFKQMP-GKNVISWTTMI--CGLDQNERSGEALDLFKNMLR 218
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/546 (35%), Positives = 302/546 (55%), Gaps = 25/546 (4%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
+ FL+ +IR +A + +Y M + + P FT+ +LKAC + DL LG+
Sbjct: 113 NPFLWTAVIRGYA-IEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQF 171
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXX--------------------XXXXXXXXXXXXX 205
H + ++V NTMI MY
Sbjct: 172 HAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNM 231
Query: 206 XLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTAC 265
A ++F+ P D V W+AM+ G+A+ A+ F M+ G+ DE+T+ ++AC
Sbjct: 232 ECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISAC 291
Query: 266 ADLGALELGKWLESYIEWKKIPKS--VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVS 323
A LGA + + S V + +ALIDM++KCG+V++A+N+F M++ + +
Sbjct: 292 AQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFT 351
Query: 324 WTSVIVGLAMHGRGSEAVSLFDEMVEQG-VEPDDVSFIGVLSACCHSKLVDKGRSYFNSM 382
++S+I+GLA HGR EA+ LF MV Q ++P+ V+F+G L AC HS LVD+GR F+SM
Sbjct: 352 YSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSM 411
Query: 383 EGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKL 442
FG+ P +HY CMVDLL R G ++EAL+ ++TM VEP+ +W +++ AC ++
Sbjct: 412 YQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEI 471
Query: 443 GESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPG-STMIELN 501
E ++ L EP NY+LLSN+YA W +VR+++ +G+KK P S +++ N
Sbjct: 472 AEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKN 531
Query: 502 NEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSE 561
+M +F G+ +H +I + ++E+ + GY P S V D+ + K L +H+E
Sbjct: 532 GQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTE 591
Query: 562 KLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLC 621
KLA+AF+LL T + I I+KNLR+C DCH + S+V + I++RD RFHHF++G C
Sbjct: 592 KLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDC 651
Query: 622 SCGDFW 627
SCGDFW
Sbjct: 652 SCGDFW 657
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 136/329 (41%), Gaps = 51/329 (15%)
Query: 150 LKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAG 209
L C L+ + K +HG V++ G D ++ +I A
Sbjct: 56 LDDCINLNQI---KQIHGHVLRKGLDQSCYILTKLIR---------TLTKLGVPMDPYAR 103
Query: 210 KVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLG 269
+V + + W+A+I GYA G A+ ++ M+ + P T ++L AC +
Sbjct: 104 RVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMK 163
Query: 270 ALELGKWLESYIEWKKIPKSVELCNALIDMFAKC-------------------------- 303
L LG+ + + V + N +IDM+ KC
Sbjct: 164 DLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIA 223
Query: 304 -----GDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVS 358
G+++ A LF + + +V+WT+++ G A + + EA+ FD M + G+ D+V+
Sbjct: 224 AYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVT 283
Query: 359 FIGVLSACCH---SKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFV 415
G +SAC SK D R+ + + + + ++D+ S+ G V+EA++
Sbjct: 284 VAGYISACAQLGASKYAD--RAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF 341
Query: 416 RTMPVEPNQIIWRSII--TACHARGELKL 442
+M N + S+I A H R + L
Sbjct: 342 MSMN-NKNVFTYSSMILGLATHGRAQEAL 369
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 359 bits (922), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 197/527 (37%), Positives = 299/527 (56%), Gaps = 14/527 (2%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +N++I A+ + + L LY+ M+ G + FT VL A L L G+
Sbjct: 204 DEVSWNSMIVAYGQHKEG-AKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQF 262
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
HG ++K GF + HV + +I Y + KVF E D V W+
Sbjct: 263 HGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYD--------SEKVFQEILSPDLVVWNT 314
Query: 226 MIGGYARRGH-SSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWK 284
MI GY+ S AV FR+MQ +G PD+ + V V +AC++L + K +
Sbjct: 315 MISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKS 374
Query: 285 KIPKS-VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSL 343
IP + + + NALI ++ K G++ A +F +M VS+ +I G A HG G+EA+ L
Sbjct: 375 HIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLL 434
Query: 344 FDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLS 403
+ M++ G+ P+ ++F+ VLSAC H VD+G+ YFN+M+ F I P+ EHY CM+DLL
Sbjct: 435 YQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLG 494
Query: 404 RAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVL 463
RAG ++EA F+ MP +P + W +++ AC + L E + EL+ +P + YV+
Sbjct: 495 RAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVM 554
Query: 464 LSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEM 523
L+N+YA R+WE+ VR+ M + ++K PG + IE+ + FVA D SH +++ E
Sbjct: 555 LANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEY 614
Query: 524 VDEMGREIKRAGYVPTTSQVLLDIDEEDKEDA---LYKHSEKLAIAFALLNTPPGTPIRI 580
++EM +++K+ GYV ++ DE + D L HSEKLA+AF L++T G + +
Sbjct: 615 LEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVV 674
Query: 581 VKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
VKNLR+C DCH+A KF+S V REI+VRD RFH FK+G CSCGD+W
Sbjct: 675 VKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 126/252 (50%), Gaps = 16/252 (6%)
Query: 207 LAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACA 266
+A ++FDE P+ D+V+++ +I GYA + A+ LF+ M+ +G D T+ ++ AC
Sbjct: 92 IARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACC 151
Query: 267 DLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTI-VSWT 325
D ++L K L + + NA + ++K G + +A+++F MD VSW
Sbjct: 152 D--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWN 209
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM-EG 384
S+IV H G++A++L+ EM+ +G + D + VL+A + GR + + +
Sbjct: 210 SMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKA 269
Query: 385 NFGIVPKIEHYGC-MVDLLSRAGFVKEALDFVRTMP--VEPNQIIWRSIITACHARGELK 441
F + H G ++D S+ G D + + P+ ++W ++I+
Sbjct: 270 GF---HQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISG------YS 320
Query: 442 LGESISKELLRN 453
+ E +S+E +++
Sbjct: 321 MNEELSEEAVKS 332
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 359 bits (921), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 172/421 (40%), Positives = 257/421 (61%), Gaps = 1/421 (0%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A +VFD D+ TW MI Y R+G A+ LF +MQ GV P +++S+L+ CA
Sbjct: 284 ARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCAT 343
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSV 327
L +L+ G+ + +++ + V + + L+ M+ KCG++ KA +F + S I+ W S+
Sbjct: 344 LASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSI 403
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG 387
I G A HG G EA+ +F EM G P+ V+ I +L+AC ++ +++G F SME F
Sbjct: 404 ISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFC 463
Query: 388 IVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESIS 447
+ P +EHY C VD+L RAG V +A++ + +M ++P+ +W +++ AC L L E +
Sbjct: 464 VTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAA 523
Query: 448 KELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEF 507
K+L NEP + YVLLS+I A +W VR+ M + K PG + IE+ ++ F
Sbjct: 524 KKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMF 583
Query: 508 VAGD-KSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIA 566
G K+H + I M+++ ++ AGY P S VL D+DEE+K D+L +HSE+LA+A
Sbjct: 584 TRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVA 643
Query: 567 FALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDF 626
+ LL P G PIR++KNLRVC DCH+A K ISKV REI++RD NRFHHF NG CSC D+
Sbjct: 644 YGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDY 703
Query: 627 W 627
W
Sbjct: 704 W 704
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 118/246 (47%), Gaps = 15/246 (6%)
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIH 186
L L+ M + GV P+ + +L CA L+ L+ G+ VH +V+ FDDD++V + ++
Sbjct: 315 ALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMT 374
Query: 187 MYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM 246
MY A VFD D + W+++I GYA G A+ +F EM
Sbjct: 375 MYVKCGELVK-----------AKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEM 423
Query: 247 QVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWK-KIPKSVELCNALIDMFAKCGD 305
G P+++T++++LTAC+ G LE G + +E K + +VE + +DM + G
Sbjct: 424 PSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQ 483
Query: 306 VDKAMNLFRQMD-SCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLS 364
VDKAM L M W +++ H R A ++ E EPD+ +LS
Sbjct: 484 VDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEN--EPDNAGTYVLLS 541
Query: 365 ACCHSK 370
+ S+
Sbjct: 542 SINASR 547
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 112/271 (41%), Gaps = 45/271 (16%)
Query: 211 VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPD--EITMVSVLTACADL 268
+FDE + + VTW+ MI GY + A LF V P+ E++ S+L
Sbjct: 194 IFDEMRERNVVTWTTMITGYRQNNRVDVARKLFE------VMPEKTEVSWTSMLLGYTLS 247
Query: 269 GALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVI 328
G +E E + E + K V CNA+I F + G++ KA +F M+ +W +I
Sbjct: 248 GRIEDA---EEFFEVMPM-KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMI 303
Query: 329 VGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGR------------ 376
G EA+ LF +M +QGV P S I +LS C + GR
Sbjct: 304 KAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFD 363
Query: 377 ------SYFNSMEGNFGIVPK------------IEHYGCMVDLLSRAGFVKEALDFVRTM 418
S +M G + K I + ++ + G +EAL M
Sbjct: 364 DDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEM 423
Query: 419 PVE---PNQIIWRSIITACHARGELKLGESI 446
P PN++ +I+TAC G+L+ G I
Sbjct: 424 PSSGTMPNKVTLIAILTACSYAGKLEEGLEI 454
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 27/230 (11%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A ++FDE + + V+W+ ++ GY + A +F M E +VS TA
Sbjct: 67 ARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMP-------ERNVVS-WTAMVK 118
Query: 268 LGALELGKWLESYIEWKKIPKSVELC-NALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTS 326
G ++ G E+ + ++P+ E+ + G +DKA L+ M +V+ T+
Sbjct: 119 -GYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTN 177
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNF 386
+I GL GR EA +FDEM E+ V V++ +++ + VD R F M
Sbjct: 178 MIGGLCREGRVDEARLIFDEMRERNV----VTWTTMITGYRQNNRVDVARKLFEVMPEKT 233
Query: 387 GIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHA 436
+ + M+ + +G +++A +F MP++P + AC+A
Sbjct: 234 EV-----SWTSMLLGYTLSGRIEDAEEFFEVMPMKP--------VIACNA 270
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 10/135 (7%)
Query: 293 CNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGV 352
C+ I ++ G +++A F + I SW S++ G +G EA LFDEM E+ V
Sbjct: 20 CSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV 79
Query: 353 EPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEAL 412
VS+ G++S ++++ + R+ F M + + MV + G V EA
Sbjct: 80 ----VSWNGLVSGYIKNRMIVEARNVFELMPER-----NVVSWTAMVKGYMQEGMVGEAE 130
Query: 413 DFVRTMPVEPNQIIW 427
MP E N++ W
Sbjct: 131 SLFWRMP-ERNEVSW 144
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 83/226 (36%), Gaps = 49/226 (21%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A K FD +W++++ GY G A LF EM V
Sbjct: 36 ARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV---------------- 79
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSV 327
+ W N L+ + K + +A N+F M +VSWT++
Sbjct: 80 -------------VSW----------NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAM 116
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG 387
+ G G EA SLF M E+ ++VS+ + +DK R ++ M
Sbjct: 117 VKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKARKLYDMMP---- 168
Query: 388 IVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITA 433
V + M+ L R G V EA M E N + W ++IT
Sbjct: 169 -VKDVVASTNMIGGLCREGRVDEARLIFDEMR-ERNVVTWTTMITG 212
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 355 bits (912), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 190/528 (35%), Positives = 296/528 (56%), Gaps = 24/528 (4%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVV--PNKFTYPFVLKACAGLSDLRLGKAVHG 167
+N +I F H S L + M + P++FT +LKAC+ + GK +HG
Sbjct: 176 WNAMIAGFVHAGYG-SKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHG 234
Query: 168 SVVKFGFD--DDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
+V+ GF + +++ +Y A K FD+ + ++WS+
Sbjct: 235 FLVRSGFHCPSSATITGSLVDLYVKCGYLFS-----------ARKAFDQIKEKTMISWSS 283
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
+I GYA+ G A+GLF+ +Q + D + S++ AD L GK +++ K
Sbjct: 284 LILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALA--VK 341
Query: 286 IPKSVE--LCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSL 343
+P +E + N+++DM+ KCG VD+A F +M ++SWT VI G HG G ++V +
Sbjct: 342 LPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRI 401
Query: 344 FDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLS 403
F EM+ +EPD+V ++ VLSAC HS ++ +G F+ + GI P++EHY C+VDLL
Sbjct: 402 FYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLG 461
Query: 404 RAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVL 463
RAG +KEA + TMP++PN IW+++++ C G+++LG+ + K LLR + + +NYV+
Sbjct: 462 RAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVM 521
Query: 464 LSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEM 523
+SN+Y + W ++ RE+ +++G+KK G + +E+ E+ F +G+ SH I E
Sbjct: 522 MSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQET 581
Query: 524 VDEMGREIKRA-GYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLN---TPPGTPIR 579
+ E R ++ GYV L DID+E KE+ L HSEKLAI AL G IR
Sbjct: 582 LKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIR 641
Query: 580 IVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
+ KNLRVC DCH K +SK+ VVRD RFH F++G CSCGD+W
Sbjct: 642 VFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 184/400 (46%), Gaps = 52/400 (13%)
Query: 128 LQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHM 187
L L+ M R G+ PN+FT+ LKAC L+ L G +HG +K GF+ + V N+++ M
Sbjct: 92 LSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDM 151
Query: 188 YXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQ 247
Y A KVF ++W+AMI G+ G+ S+A+ F MQ
Sbjct: 152 YSKCGRINE-----------AEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQ 200
Query: 248 VMGVC--PDEITMVSVLTACADLGALELGKWLESYIEWKKI--PKSVELCNALIDMFAKC 303
+ PDE T+ S+L AC+ G + GK + ++ P S + +L+D++ KC
Sbjct: 201 EANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKC 260
Query: 304 GDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVL 363
G + A F Q+ T++SW+S+I+G A G EA+ LF + E + D + ++
Sbjct: 261 GYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSII 320
Query: 364 SACCHSKLVDKGR---------------SYFNSMEGNF---GIVPKIEH----------- 394
L+ +G+ S NS+ + G+V + E
Sbjct: 321 GVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVI 380
Query: 395 -YGCMVDLLSRAGFVKEALDFVRTM---PVEPNQIIWRSIITACHARGELKLGESISKEL 450
+ ++ + G K+++ M +EP+++ + ++++AC G +K GE + +L
Sbjct: 381 SWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKL 440
Query: 451 LRN---EPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMR 487
L +P E +Y + ++ + R ++ + + M ++
Sbjct: 441 LETHGIKPRVE-HYACVVDLLGRAGRLKEAKHLIDTMPIK 479
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 167/353 (47%), Gaps = 34/353 (9%)
Query: 139 VVPN-KFTYPFVLKACA--GLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXX 195
++PN + +L+ C GLSD G VH ++K G +L N +I MY
Sbjct: 1 MIPNQRQNLVSILRVCTRKGLSDQ--GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPL 58
Query: 196 XXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDE 255
+A KVFD P+ + V+WSA++ G+ G ++ LF EM G+ P+E
Sbjct: 59 -----------MAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNE 107
Query: 256 ITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQ 315
T + L AC L ALE G + + VE+ N+L+DM++KCG +++A +FR+
Sbjct: 108 FTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRR 167
Query: 316 MDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVE--PDDVSFIGVLSACCHSKLVD 373
+ +++SW ++I G G GS+A+ F M E ++ PD+ + +L AC + ++
Sbjct: 168 IVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIY 227
Query: 374 KGRSYFNSM-EGNFGIVPKIEHYGCMVDLLSRAGFV---KEALDFVRTMPVEPNQIIWRS 429
G+ + F G +VDL + G++ ++A D ++ E I W S
Sbjct: 228 AGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK----EKTMISWSS 283
Query: 430 IITACHARGELKLGESISKELLRNEPTHESNYVLLSNI------YAKLRRWEQ 476
+I GE + K L E + + LS+I +A LR+ +Q
Sbjct: 284 LILGYAQEGEFVEAMGLFKRL--QELNSQIDSFALSSIIGVFADFALLRQGKQ 334
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 352 bits (903), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 182/529 (34%), Positives = 297/529 (56%), Gaps = 18/529 (3%)
Query: 105 FDAFL------FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSD 158
FD L +NT+I + + +S L ++ M G ++FT VL AC D
Sbjct: 119 FDGMLERSLVSWNTMIGLYTRN-RMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCD 177
Query: 159 LRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKT 218
K +H VK D +L+V ++ +Y A +VF+
Sbjct: 178 ALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKD-----------AVQVFESMQDK 226
Query: 219 DSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLE 278
SVTWS+M+ GY + + A+ L+R Q M + ++ T+ SV+ AC++L AL GK +
Sbjct: 227 SSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMH 286
Query: 279 SYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGS 338
+ I +V + ++ +DM+AKCG + ++ +F ++ + W ++I G A H R
Sbjct: 287 AVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPK 346
Query: 339 EAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCM 398
E + LF++M + G+ P++V+F +LS C H+ LV++GR +F M +G+ P + HY CM
Sbjct: 347 EVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCM 406
Query: 399 VDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHE 458
VD+L RAG + EA + ++++P +P IW S++ +C L+L E +++L EP +
Sbjct: 407 VDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENA 466
Query: 459 SNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYK 518
N+VLLSNIYA ++WE+ K R+++ +KKV G + I++ +++ F G+ H + +
Sbjct: 467 GNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIR 526
Query: 519 QIYEMVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPI 578
+I +D + + ++ GY P+ L D++ KE+ L +HSEKLA+ F L+ P +P+
Sbjct: 527 EICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPV 586
Query: 579 RIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
RI+KNLR+C DCH K S R I+VRD NRFHHF +G CSCGDFW
Sbjct: 587 RIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 159/346 (45%), Gaps = 29/346 (8%)
Query: 107 AFLFNTLIRAFAHTPQSKSSGLQLYRTML----RYGVVPNKFTYPF--------VLKACA 154
F N LIR +S +S L ++L + V P +++ F +L+ CA
Sbjct: 13 GFTVNFLIRCKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCA 72
Query: 155 GLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDE 214
+ KA HG +++ + D+ + N +I+ Y LA +VFD
Sbjct: 73 RNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVE-----------LARQVFDG 121
Query: 215 SPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACA-DLGALEL 273
+ V+W+ MIG Y R S A+ +F EM+ G E T+ SVL+AC + ALE
Sbjct: 122 MLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC 181
Query: 274 GKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAM 333
K L I ++ + AL+D++AKCG + A+ +F M + V+W+S++ G
Sbjct: 182 KK-LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQ 240
Query: 334 HGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIE 393
+ EA+ L+ +E + + V+ AC + + +G+ +++ G +
Sbjct: 241 NKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQ-MHAVICKSGFGSNVF 299
Query: 394 HYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIIT--ACHAR 437
VD+ ++ G ++E+ + + E N +W +II+ A HAR
Sbjct: 300 VASSAVDMYAKCGSLRESY-IIFSEVQEKNLELWNTIISGFAKHAR 344
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 351 bits (900), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 183/523 (34%), Positives = 297/523 (56%), Gaps = 13/523 (2%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +N++I + + + ++L++ M+ + TY ++ L+DL+ GK +
Sbjct: 372 DTVSWNSIISGYIQSGDLMEA-MKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGL 430
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H + +K G DL V N +I MY K+F D+VTW+
Sbjct: 431 HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSL-----------KIFSSMGTGDTVTWNT 479
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
+I R G + + + +M+ V PD T + L CA L A LGK + +
Sbjct: 480 VISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFG 539
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
+++ NALI+M++KCG ++ + +F +M +V+WT +I M+G G +A+ F
Sbjct: 540 YESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFA 599
Query: 346 EMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRA 405
+M + G+ PD V FI ++ AC HS LVD+G + F M+ ++ I P IEHY C+VDLLSR+
Sbjct: 600 DMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRS 659
Query: 406 GFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLS 465
+ +A +F++ MP++P+ IW S++ AC G+++ E +S+ ++ P +L S
Sbjct: 660 QKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILAS 719
Query: 466 NIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVD 525
N YA LR+W++ + +R+ + + + K PG + IE+ + F +GD S Q + IY+ ++
Sbjct: 720 NAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLE 779
Query: 526 EMGREIKRAGYVPTTSQVLLDI-DEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNL 584
+ + + GY+P +V ++ +EE+K + HSE+LAIAF LLNT PGTP++++KNL
Sbjct: 780 ILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNL 839
Query: 585 RVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
RVC DCH TK ISK+ REI+VRD NRFH FK+G CSC D W
Sbjct: 840 RVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 183/370 (49%), Gaps = 22/370 (5%)
Query: 106 DAFLFNTLIRAFAHT---PQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLG 162
+ +L+N++IRAF+ P++ L+ Y + V P+K+T+P V+KACAGL D +G
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEA----LEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMG 125
Query: 163 KAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVT 222
V+ ++ GF+ DL V N ++ MY A +VFDE P D V+
Sbjct: 126 DLVYEQILDMGFESDLFVGNALVDMYSRMGLLTR-----------ARQVFDEMPVRDLVS 174
Query: 223 WSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIE 282
W+++I GY+ G+ A+ ++ E++ + PD T+ SVL A +L ++ G+ L +
Sbjct: 175 WNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFAL 234
Query: 283 WKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVS 342
+ V + N L+ M+ K A +F +MD VS+ ++I G E+V
Sbjct: 235 KSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVR 294
Query: 343 LFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLL 402
+F E ++Q +PD ++ VL AC H + + + +N M G V + ++D+
Sbjct: 295 MFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYML-KAGFVLESTVRNILIDVY 352
Query: 403 SRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELL-RNEPTHESNY 461
++ G + A D +M + + + W SII+ G+L + K ++ E Y
Sbjct: 353 AKCGDMITARDVFNSMECK-DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITY 411
Query: 462 VLLSNIYAKL 471
++L ++ +L
Sbjct: 412 LMLISVSTRL 421
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 150/334 (44%), Gaps = 15/334 (4%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D+ +NT+I + + S + ++ P+ T VL+AC L DL L K +
Sbjct: 272 DSVSYNTMICGYLKLEMVEESVRMFLENLDQFK--PDLLTVSSVLRACGHLRDLSLAKYI 329
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
+ ++K GF + V+N +I +Y A VF+ D+V+W++
Sbjct: 330 YNYMLKAGFVLESTVRNILIDVYAKCGDMIT-----------ARDVFNSMECKDTVSWNS 378
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
+I GY + G A+ LF+ M +M D IT + +++ L L+ GK L S
Sbjct: 379 IISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSG 438
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
I + + NALIDM+AKCG+V ++ +F M + V+W +VI G + + +
Sbjct: 439 ICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTT 498
Query: 346 EMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRA 405
+M + V PD +F+ L C G+ + FG +++ ++++ S+
Sbjct: 499 QMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL-RFGYESELQIGNALIEMYSKC 557
Query: 406 GFVKEALDFVRTMPVEPNQIIWRSIITACHARGE 439
G ++ + M + + W +I A GE
Sbjct: 558 GCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGE 590
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 12/236 (5%)
Query: 142 NKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXX 201
+ + PF+ +A + S+L + +H V+ G D +I Y
Sbjct: 3 TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSL--- 59
Query: 202 XXXXXLAGKVFDE-SPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVS 260
VF SP + W+++I +++ G A+ + +++ V PD+ T S
Sbjct: 60 --------SVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPS 111
Query: 261 VLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCT 320
V+ ACA L E+G + I + + NAL+DM+++ G + +A +F +M
Sbjct: 112 VIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRD 171
Query: 321 IVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGR 376
+VSW S+I G + HG EA+ ++ E+ + PD + VL A + +V +G+
Sbjct: 172 LVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQ 227
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 350 bits (899), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 206/613 (33%), Positives = 316/613 (51%), Gaps = 64/613 (10%)
Query: 70 VLTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQ 129
V + + SS + Y+ S +F + P F+ N LIR + +SS ++
Sbjct: 62 VAAQLVSCSSLLKSPDYSLS-IFRNSEERNP-------FVLNALIRGLTENARFESS-VR 112
Query: 130 LYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYX 189
+ MLR GV P++ T+PFVLK+ + L LG+A+H + +K D D V+ +++ MY
Sbjct: 113 HFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYA 172
Query: 190 XXXXXXXXXXX------------------------XXXXXXLAGKVFDESPKTDSVTWSA 225
+A +F P+ +S +WS
Sbjct: 173 KTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWST 232
Query: 226 MIGGYARRGHSSRAVGLFR-------------------------------EMQVMGVCPD 254
+I GY G +RA LF EM G+ P+
Sbjct: 233 LIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPN 292
Query: 255 EITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFR 314
E T+ +VL+AC+ GAL G + YI I + AL+DM+AKCG++D A +F
Sbjct: 293 EYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFS 352
Query: 315 QMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDK 374
M+ I+SWT++I G A+HGR +A+ F +M+ G +PD+V F+ VL+AC +S VD
Sbjct: 353 NMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDL 412
Query: 375 GRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITAC 434
G ++F+SM ++ I P ++HY +VDLL RAG + EA + V MP+ P+ W ++ AC
Sbjct: 413 GLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRAC 472
Query: 435 HARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPG 494
A + ES+S+ LL +P +Y+ L +A + K R + R ++ G
Sbjct: 473 KAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLG 532
Query: 495 STMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDIDEEDKED 554
+ IEL+ ++ +F AGD SH ++I +DE+ + GY P + DI+EE+KE+
Sbjct: 533 WSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSIHDIEEEEKEN 592
Query: 555 ALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFH 614
HSEKLA+ L T PGT IRI+KNLR+C DCHS K++SK+ R+I++RD +FH
Sbjct: 593 VTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQFH 652
Query: 615 HFKNGLCSCGDFW 627
HFK+G CSCGD+W
Sbjct: 653 HFKDGRCSCGDYW 665
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 350 bits (899), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 172/422 (40%), Positives = 262/422 (62%), Gaps = 2/422 (0%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A +VFD + + +W +I + R G A+ LF MQ GV P T++S+L+ CA
Sbjct: 284 ARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCAS 343
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSV 327
L +L GK + + + + V + + L+ M+ KCG++ K+ +F + S I+ W S+
Sbjct: 344 LASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSI 403
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQG-VEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNF 386
I G A HG G EA+ +F EM G +P++V+F+ LSAC ++ +V++G + SME F
Sbjct: 404 ISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVF 463
Query: 387 GIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESI 446
G+ P HY CMVD+L RAG EA++ + +M VEP+ +W S++ AC +L + E
Sbjct: 464 GVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFC 523
Query: 447 SKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCE 506
+K+L+ EP + Y+LLSN+YA RW ++R++M R ++K PG + E+ N++
Sbjct: 524 AKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHA 583
Query: 507 FVAGD-KSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAI 565
F G SH + + I +++DE+ ++ AGY P S L D+DEE+K ++L HSE+LA+
Sbjct: 584 FTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAV 643
Query: 566 AFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGD 625
A+ALL G PIR++KNLRVC DCH+A K ISKV REI++RD NRFHHF+NG CSC D
Sbjct: 644 AYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKD 703
Query: 626 FW 627
+W
Sbjct: 704 YW 705
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 28/247 (11%)
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIH 186
L L+ M + GV P T +L CA L+ L GK VH +V+ FD D++V + ++
Sbjct: 315 ALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMT 374
Query: 187 MYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM 246
MY +FD P D + W+++I GYA G A+ +F EM
Sbjct: 375 MYIKCGELVKSKL-----------IFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEM 423
Query: 247 QVMGVC-PDEITMVSVLTACADLGALELG----KWLESYIEWKKIPKSVELCNALIDMFA 301
+ G P+E+T V+ L+AC+ G +E G + +ES K I ++DM
Sbjct: 424 PLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYA---CMVDMLG 480
Query: 302 KCGDVDKAMNLFRQMDSCTI----VSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDV 357
+ G ++AM + +DS T+ W S++ H + A +++E +EP++
Sbjct: 481 RAGRFNEAMEM---IDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIE--IEPENS 535
Query: 358 SFIGVLS 364
+LS
Sbjct: 536 GTYILLS 542
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 118/275 (42%), Gaps = 43/275 (15%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A KVFD P+ + V+W+A++ GY G A LF +M ++++ +L
Sbjct: 98 ARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE----KNKVSWTVML----- 148
Query: 268 LGALELGKWLESYIEWKKIPKSVELC-NALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTS 326
+G L+ G+ ++ ++ IP + ++I K G VD+A +F +M ++++WT+
Sbjct: 149 IGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTT 208
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSME--- 383
++ G + R +A +FD M E+ +VS+ +L + ++ F M
Sbjct: 209 MVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEVMPVKP 264
Query: 384 -----------GNFGIVPKIEH------------YGCMVDLLSRAGFVKEALDFVRTMP- 419
G G + K + ++ + R GF EALD M
Sbjct: 265 VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQK 324
Query: 420 --VEPNQIIWRSIITACHARGELKLGESISKELLR 452
V P SI++ C + L G+ + +L+R
Sbjct: 325 QGVRPTFPTLISILSVCASLASLHHGKQVHAQLVR 359
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 109/242 (45%), Gaps = 22/242 (9%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPD--EITMVSVLTAC 265
A ++FDE + +TW+ M+ GY + A +F V P+ E++ S+L
Sbjct: 191 AREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF------DVMPEKTEVSWTSMLMGY 244
Query: 266 ADLGALELGKWLESYIEWKKIP-KSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSW 324
G +E + L ++ +P K V CNA+I + G++ KA +F M SW
Sbjct: 245 VQNGRIEDAEEL-----FEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASW 299
Query: 325 TSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM-E 383
+VI +G EA+ LF M +QGV P + I +LS C + G+ +
Sbjct: 300 QTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVR 359
Query: 384 GNFGIVPKIEHYGCMVDLLSRAG-FVKEALDFVRTMPVEPNQIIWRSIIT--ACHARGEL 440
F + + ++ + + G VK L F R P + + I+W SII+ A H GE
Sbjct: 360 CQFDV--DVYVASVLMTMYIKCGELVKSKLIFDR-FPSK-DIIMWNSIISGYASHGLGEE 415
Query: 441 KL 442
L
Sbjct: 416 AL 417
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 107/233 (45%), Gaps = 18/233 (7%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A K+FDE P + ++W+ ++ GY + G A +F M V ++ +++
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNV----VSWTALVKGYVH 122
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSV 327
G +++ + L WK K+ ++ F + G +D A L+ + ++ TS+
Sbjct: 123 NGKVDVAESL----FWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSM 178
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG 387
I GL GR EA +FDEM E+ V +++ +++ + VD R F+ M
Sbjct: 179 IHGLCKEGRVDEAREIFDEMSERSV----ITWTTMVTGYGQNNRVDDARKIFDVMPEKTE 234
Query: 388 IVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGEL 440
+ + M+ + G +++A + MPV+P I ++I+ +GE+
Sbjct: 235 V-----SWTSMLMGYVQNGRIEDAEELFEVMPVKP-VIACNAMISGLGQKGEI 281
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 105/242 (43%), Gaps = 24/242 (9%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDE--ITMVSVLTAC 265
A K+FD +W++M+ GY A LF EM PD I+ +++
Sbjct: 36 ARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------PDRNIISWNGLVS-- 87
Query: 266 ADLGALELGKWLESYIEWKKIP-KSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSW 324
G ++ G+ E+ + +P ++V AL+ + G VD A +LF +M VSW
Sbjct: 88 ---GYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSW 144
Query: 325 TSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEG 384
T +++G GR +A L+ EM+ + D+++ ++ C VD+ R F+ M
Sbjct: 145 TVMLIGFLQDGRIDDACKLY-EMIP---DKDNIARTSMIHGLCKEGRVDEAREIFDEMSE 200
Query: 385 NFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGE 444
I + MV + V +A MP E ++ W S++ G ++ E
Sbjct: 201 RSVIT-----WTTMVTGYGQNNRVDDARKIFDVMP-EKTEVSWTSMLMGYVQNGRIEDAE 254
Query: 445 SI 446
+
Sbjct: 255 EL 256
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 347 bits (891), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 174/500 (34%), Positives = 291/500 (58%), Gaps = 12/500 (2%)
Query: 128 LQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHM 187
L+ + M+ + P+ P K+CA LS +G++VH +K G+D D+ V ++++ M
Sbjct: 101 LEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDM 160
Query: 188 YXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQ 247
Y A K+FDE P+ + VTWS M+ GYA+ G + A+ LF+E
Sbjct: 161 YAKCGEIV-----------YARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 248 VMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVD 307
+ ++ + SV++ CA+ LELG+ + S + ++L+ +++KCG +
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 308 KAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACC 367
A +F ++ + W +++ A H + + LF M G++P+ ++F+ VL+AC
Sbjct: 270 GAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS 329
Query: 368 HSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIW 427
H+ LVD+GR YF+ M+ + I P +HY +VD+L RAG ++EAL+ + MP++P + +W
Sbjct: 330 HAGLVDEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVW 388
Query: 428 RSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMR 487
+++T+C +L + ++ P ++ LSN YA R+E K R+++ R
Sbjct: 389 GALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDR 448
Query: 488 GMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDI 547
G KK G + +E N++ F AG++ H++ K+IYE + E+G E+++AGY+ TS VL ++
Sbjct: 449 GEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREV 508
Query: 548 DEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVV 607
D ++K + HSE+LAIAF L+ P PIR++KNLRVC DCH+A KF+S R I+V
Sbjct: 509 DGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIV 568
Query: 608 RDRNRFHHFKNGLCSCGDFW 627
RD NRFH F++G CSC D+W
Sbjct: 569 RDNNRFHRFEDGKCSCNDYW 588
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 127/272 (46%), Gaps = 13/272 (4%)
Query: 162 GKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSV 221
G +HG VVK G V N +I+ Y + + F++SP+ S
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFD-----------SRRAFEDSPQKSST 82
Query: 222 TWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYI 281
TWS++I +A+ ++ ++M + PD+ + S +CA L ++G+ +
Sbjct: 83 TWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLS 142
Query: 282 EWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAV 341
V + ++L+DM+AKCG++ A +F +M +V+W+ ++ G A G EA+
Sbjct: 143 MKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEAL 202
Query: 342 SLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDL 401
LF E + + + +D SF V+S C +S L++ GR + + +V L
Sbjct: 203 WLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQ-IHGLSIKSSFDSSSFVGSSLVSL 261
Query: 402 LSRAGFVKEALDFVRTMPVEPNQIIWRSIITA 433
S+ G + A +PV+ N IW +++ A
Sbjct: 262 YSKCGVPEGAYQVFNEVPVK-NLGIWNAMLKA 292
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 346 bits (887), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 182/526 (34%), Positives = 291/526 (55%), Gaps = 19/526 (3%)
Query: 104 SFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGK 163
+++AF+ N++ T ++ + R PN T+ L AC+ L LG
Sbjct: 176 TWNAFISNSV------TDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGM 229
Query: 164 AVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTW 223
+HG V++ GFD D+ V N +I Y +F E ++V+W
Sbjct: 230 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEI-----------IFTEMGTKNAVSW 278
Query: 224 SAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEW 283
+++ Y + +A L+ + V + + SVL+ACA + LELG+ + ++
Sbjct: 279 CSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVK 338
Query: 284 KKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSL 343
+ +++ + +AL+DM+ KCG ++ + F +M +V+ S+I G A G+ A++L
Sbjct: 339 ACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALAL 398
Query: 344 FDEMVEQGV--EPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDL 401
F+EM +G P+ ++F+ +LSAC + V+ G F+SM +GI P EHY C+VD+
Sbjct: 399 FEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDM 458
Query: 402 LSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNY 461
L RAG V+ A +F++ MP++P +W ++ AC G+ +LG ++ L + +P N+
Sbjct: 459 LGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNH 518
Query: 462 VLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIY 521
VLLSN +A RW + VRE + G+KK G + I + N++ F A D+SH K+I
Sbjct: 519 VLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQ 578
Query: 522 EMVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIV 581
+ ++ E++ AGY P L D++EE+K + HSEKLA+AF LL+ P PIRI
Sbjct: 579 TTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRIT 638
Query: 582 KNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
KNLR+C DCHS KF+S REI+VRD NRFH FK+G+CSC D+W
Sbjct: 639 KNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 155/364 (42%), Gaps = 14/364 (3%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+ +LI A ++ ++ + M R GVVPN FT+P KA A L GK +H
Sbjct: 76 WTSLISGLAQNGHFSTALVEFFE-MRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALA 134
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
VK G D+ V + MY A K+FDE P+ + TW+A I
Sbjct: 135 VKCGRILDVFVGCSAFDMYCKTRLRDD-----------ARKLFDEIPERNLETWNAFISN 183
Query: 230 YARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKS 289
G A+ F E + + P+ IT + L AC+D L LG L +
Sbjct: 184 SVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTD 243
Query: 290 VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVE 349
V +CN LID + KC + + +F +M + VSW S++ + +A L+ +
Sbjct: 244 VSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRK 303
Query: 350 QGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVK 409
VE D VLSAC ++ GRS ++ + I +VD+ + G ++
Sbjct: 304 DIVETSDFMISSVLSACAGMAGLELGRS-IHAHAVKACVERTIFVGSALVDMYGKCGCIE 362
Query: 410 EALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYA 469
++ MP E N + S+I +G++ + ++ +E+ NY+ ++ +
Sbjct: 363 DSEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLS 421
Query: 470 KLRR 473
R
Sbjct: 422 ACSR 425
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 14/221 (6%)
Query: 148 FVLKACAGLSDLRLGKAVHGSVVK-FGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXX 206
+LK S +RLG+ VH +VK + N +I+MY
Sbjct: 11 LLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPES---------- 60
Query: 207 LAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACA 266
A V +P + V+W+++I G A+ GH S A+ F EM+ GV P++ T A A
Sbjct: 61 -ARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVA 119
Query: 267 DLGALELGKWLESY-IEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
L GK + + ++ +I C+A DM+ K D A LF ++ + +W
Sbjct: 120 SLRLPVTGKQIHALAVKCGRILDVFVGCSAF-DMYCKTRLRDDARKLFDEIPERNLETWN 178
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSAC 366
+ I GR EA+ F E P+ ++F L+AC
Sbjct: 179 AFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNAC 219
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 43/205 (20%)
Query: 287 PKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDE 346
P L N LI+M++K + A + R + +VSWTS+I GLA +G S A+ F E
Sbjct: 39 PPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFE 98
Query: 347 MVEQGVEPDDVSF-----------------------------IGVLSAC------CHSKL 371
M +GV P+D +F + V C C ++L
Sbjct: 99 MRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRL 158
Query: 372 VDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALD-FV--RTMPVEPNQIIWR 428
D R F+ + +E + + G +EA++ F+ R + PN I +
Sbjct: 159 RDDARKLFDEIPER-----NLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFC 213
Query: 429 SIITACHARGELKLGESISKELLRN 453
+ + AC L LG + +LR+
Sbjct: 214 AFLNACSDWLHLNLGMQLHGLVLRS 238
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 345 bits (885), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 185/528 (35%), Positives = 301/528 (57%), Gaps = 16/528 (3%)
Query: 101 RASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLR 160
R D L LI ++ + + ++ +++ML V PN++TY VL +C L D+
Sbjct: 226 RVEEKDVVLITALIVGYSQKGED-TEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIG 284
Query: 161 LGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDS 220
GK +HG +VK GF+ L Q +++ MY +VF +
Sbjct: 285 NGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSL-----------RVFKCIEYPNQ 333
Query: 221 VTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESY 280
V+W+++I G + G A+ FR+M + P+ T+ S L C++L E G+ +
Sbjct: 334 VSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGI 393
Query: 281 IEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEA 340
+ + + LID++ KCG D A +F + ++S ++I A +G G EA
Sbjct: 394 VTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREA 453
Query: 341 VSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVD 400
+ LF+ M+ G++P+DV+ + VL AC +S+LV++G F+S + I+ +HY CMVD
Sbjct: 454 LDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVD 512
Query: 401 LLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESN 460
LL RAG ++EA + + T + P+ ++WR++++AC ++++ E I++++L EP E
Sbjct: 513 LLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGT 571
Query: 461 YVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDK-SHDQYKQ 519
+L+SN+YA +W + +++ M +KK P + +E+N E F+AGD SH +Q
Sbjct: 572 LILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQ 631
Query: 520 IYEMVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIR 579
I E ++E+ ++ K GYV S V D++E KE +L++HSEKLAIAFA+ G+ IR
Sbjct: 632 ILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVGGS-IR 690
Query: 580 IVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
I+KNLRVC DCHS K +S+V REI+ RD RFHHF++G CSCGD+W
Sbjct: 691 ILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 143/298 (47%), Gaps = 8/298 (2%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A +VFD + VTW+++I + S AV ++R M V PDE T+ SV A +D
Sbjct: 118 ARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSD 177
Query: 268 LGALELGKWLESYIEWKKIPKS-VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTS 326
L + + + S V + +AL+DM+ K G +A + +++ +V T+
Sbjct: 178 LSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITA 237
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNF 386
+IVG + G +EAV F M+ + V+P++ ++ VL +C + K + G+ M +
Sbjct: 238 LIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKS- 296
Query: 387 GIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESI 446
G + ++ + R V ++L + + PNQ+ W S+I+ G ++
Sbjct: 297 GFESALASQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQVSWTSLISGLVQNGREEMALIE 355
Query: 447 SKELLRNEPTHESNYVLLSNIY--AKLRRWEQKTKVREMMDMRGM--KKVPGSTMIEL 500
++++R + +++ L S + + L +E+ ++ ++ G K GS +I+L
Sbjct: 356 FRKMMR-DSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDL 412
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 261 VLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCT 320
+L C D ++ K +++++ P + + L+D KCGD+D A +F M
Sbjct: 71 LLRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFDGMSERH 129
Query: 321 IVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSA 365
IV+W S+I L H R EAV ++ M+ V PD+ + V A
Sbjct: 130 IVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKA 174
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 180/490 (36%), Positives = 282/490 (57%), Gaps = 52/490 (10%)
Query: 63 GLINNPLVLTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQ 122
GL + ++TK + YAT LF+ + S+ + FL+N++IRA+ H
Sbjct: 37 GLSQSSFMVTKMVDFCDKIEDMDYATR-LFN-------QVSNPNVFLYNSIIRAYTHNSL 88
Query: 123 SKSSGLQLYRTMLRYGV-VPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQ 181
+++Y+ +LR +P++FT+PF+ K+CA L LGK VHG + KFG + +
Sbjct: 89 Y-CDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTE 147
Query: 182 NTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVG 241
N +I MY A KVFDE + D ++W++++ GYAR G +A G
Sbjct: 148 NALIDMYMKFDDLVD-----------AHKVFDEMYERDVISWNSLLSGYARLGQMKKAKG 196
Query: 242 LF-------------------------------REMQVMGVCPDEITMVSVLTACADLGA 270
LF REMQ+ G+ PDEI+++SVL +CA LG+
Sbjct: 197 LFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGS 256
Query: 271 LELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVG 330
LELGKW+ Y E + K +CNALI+M++KCG + +A+ LF QM+ ++SW+++I G
Sbjct: 257 LELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISG 316
Query: 331 LAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVP 390
A HG A+ F+EM V+P+ ++F+G+LSAC H + +G YF+ M ++ I P
Sbjct: 317 YAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEP 376
Query: 391 KIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKEL 450
KIEHYGC++D+L+RAG ++ A++ +TMP++P+ IW S++++C G L + L
Sbjct: 377 KIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHL 436
Query: 451 LRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAG 510
+ EP NYVLL+NIYA L +WE +++R+M+ MKK PG ++IE+NN + EFV+G
Sbjct: 437 VELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSG 496
Query: 511 DKSHDQYKQI 520
D S + +I
Sbjct: 497 DNSKPFWTEI 506
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 342 bits (878), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 174/524 (33%), Positives = 297/524 (56%), Gaps = 13/524 (2%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTML-RYGVVPNKFTYPFVLKACAGLSDLRLGKA 164
D +N+LI ++ L R M+ G PN+ T+ ++ AC G+
Sbjct: 96 DLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRC 155
Query: 165 VHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWS 224
+HG V+KFG +++ V N I+ Y + K+F++ + V+W+
Sbjct: 156 IHGLVMKFGVLEEVKVVNAFINWYGKTGDLTS-----------SCKLFEDLSIKNLVSWN 204
Query: 225 AMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWK 284
MI + + G + + + F + +G PD+ T ++VL +C D+G + L + + I +
Sbjct: 205 TMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFG 264
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLF 344
+ + AL+D+++K G ++ + +F ++ S ++WT+++ A HG G +A+ F
Sbjct: 265 GFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHF 324
Query: 345 DEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSR 404
+ MV G+ PD V+F +L+AC HS LV++G+ YF +M + I P+++HY CMVDLL R
Sbjct: 325 ELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGR 384
Query: 405 AGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLL 464
+G +++A ++ MP+EP+ +W +++ AC + +LG ++ L EP NYV+L
Sbjct: 385 SGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVML 444
Query: 465 SNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMV 524
SNIY+ W+ +++R +M +G+ + G + IE N++ +FV GD SH + ++I + +
Sbjct: 445 SNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKL 504
Query: 525 DEMGREIK-RAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKN 583
E+ +++K GY T VL D+ E+ KE+ + +HSEK+A+AF LL P PI I KN
Sbjct: 505 KEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKN 564
Query: 584 LRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
LR+C DCH K IS + R I++RD RFHHF +G CSC D+W
Sbjct: 565 LRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 119/238 (50%), Gaps = 14/238 (5%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQV--MGVCPDEITMVSVLTAC 265
A K+FDE P+ D V+W+++I GY+ RG+ + + M + +G P+E+T +S+++AC
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISAC 144
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
G+ E G+ + + + + V++ NA I+ + K GD+ + LF + +VSW
Sbjct: 145 VYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWN 204
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVD-----KGRSYFN 380
++IV +G + ++ F+ G EPD +F+ VL +C +V G F
Sbjct: 205 TMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFG 264
Query: 381 SMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARG 438
GN I ++DL S+ G ++++ + P+ + W +++ A G
Sbjct: 265 GFSGNKCITT------ALLDLYSKLGRLEDSSTVFHEI-TSPDSMAWTAMLAAYATHG 315
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 342 bits (876), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 168/422 (39%), Positives = 257/422 (60%), Gaps = 1/422 (0%)
Query: 207 LAGKVF-DESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTAC 265
LA +F D + + VTW+AMI GY + LFR M G+ P+ + S L C
Sbjct: 235 LAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGC 294
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
++L AL+LG+ + + + V +LI M+ KCG++ A LF M +V+W
Sbjct: 295 SELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWN 354
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
++I G A HG +A+ LF EM++ + PD ++F+ VL AC H+ LV+ G +YF SM +
Sbjct: 355 AMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRD 414
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGES 445
+ + P+ +HY CMVDLL RAG ++EAL +R+MP P+ ++ +++ AC ++L E
Sbjct: 415 YKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEF 474
Query: 446 ISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMC 505
+++LL+ + + YV L+NIYA RWE +VR+ M + KVPG + IE+ N++
Sbjct: 475 AAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVH 534
Query: 506 EFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAI 565
F + D+ H + I++ + E+ +++K AGY P L +++EE KE L HSEKLA+
Sbjct: 535 HFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAV 594
Query: 566 AFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGD 625
AF + P G+ I++ KNLR+C DCH A KFIS++ REI+VRD RFHHFK+G CSCGD
Sbjct: 595 AFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGD 654
Query: 626 FW 627
+W
Sbjct: 655 YW 656
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 13/208 (6%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+N +I + + + GL+L+R ML G+ PN L C+ LS L+LG+ +H V
Sbjct: 252 WNAMISGYVENSRPED-GLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIV 310
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
K +D+ ++I MY A K+F+ K D V W+AMI G
Sbjct: 311 SKSTLCNDVTALTSLISMYCKCGELGD-----------AWKLFEVMKKKDVVAWNAMISG 359
Query: 230 YARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELG-KWLESYIEWKKIPK 288
YA+ G++ +A+ LFREM + PD IT V+VL AC G + +G + ES + K+
Sbjct: 360 YAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEP 419
Query: 289 SVELCNALIDMFAKCGDVDKAMNLFRQM 316
+ ++D+ + G +++A+ L R M
Sbjct: 420 QPDHYTCMVDLLGRAGKLEEALKLIRSM 447
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 142/346 (41%), Gaps = 56/346 (16%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A FD P D+ +W+ MI GYARRG +A LF M +E++ ++++ +
Sbjct: 143 AQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMME----KNEVSWNAMISGYIE 198
Query: 268 LGALELGKWLESYIEWKKIP-KSVELCNALIDMFAKCGDVDKAMNLFRQMD-SCTIVSWT 325
G LE +K P + V A+I + K V+ A +F+ M + +V+W
Sbjct: 199 CGDLEKASHF-----FKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWN 253
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSME-- 383
++I G + R + + LF M+E+G+ P+ L C + GR +
Sbjct: 254 AMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKS 313
Query: 384 -------------------GNFGIVPK---------IEHYGCMVDLLSRAGFVKEALDFV 415
G G K + + M+ ++ G +AL
Sbjct: 314 TLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLF 373
Query: 416 RTM---PVEPNQIIWRSIITACHARGELKLGESISKELLRN-----EPTHESNYVLLSNI 467
R M + P+ I + +++ AC+ G + +G + + ++R+ +P H Y + ++
Sbjct: 374 REMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDH---YTCMVDL 430
Query: 468 YAKLRRWEQKTKVREMMDMRGMKKVPGSTM----IELNNEMCEFVA 509
+ + E+ K+ M R V G+ + + N E+ EF A
Sbjct: 431 LGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAA 476
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 294 NALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMH-GRGSEAVSLFDEMVEQGV 352
N +I + GD+D A+ +F M + ++W S+++G++ R EA LFDE+
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEI----P 120
Query: 353 EPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEAL 412
EPD S+ +LS + +K +S+F+ M + M+ +R G +++A
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMP-----FKDAASWNTMITGYARRGEMEKAR 175
Query: 413 DFVRTMPVEPNQIIWRSIITACHARGELK 441
+ +M +E N++ W ++I+ G+L+
Sbjct: 176 ELFYSM-MEKNEVSWNAMISGYIECGDLE 203
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 338 bits (868), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 183/491 (37%), Positives = 277/491 (56%), Gaps = 31/491 (6%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D F +N +I + + + S ++L M R V P T VL AC+ + D L K V
Sbjct: 200 DVFSWNLMISGYNRMKEYEES-IELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRV 258
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXX--------------------XXXXXXXXXXXXXXX 205
H V + + L ++N +++ Y
Sbjct: 259 HEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNL 318
Query: 206 XLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTAC 265
LA FD+ P D ++W+ MI GY R G + ++ +FREMQ G+ PDE TMVSVLTAC
Sbjct: 319 KLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTAC 378
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
A LG+LE+G+W+++YI+ KI V + NALIDM+ KCG +KA +F MD +WT
Sbjct: 379 AHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWT 438
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
+++VGLA +G+G EA+ +F +M + ++PDD++++GVLSAC HS +VD+ R +F M +
Sbjct: 439 AMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSD 498
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGES 445
I P + HYGCMVD+L RAG VKEA + +R MP+ PN I+W +++ A + + E
Sbjct: 499 HRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAEL 558
Query: 446 ISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMC 505
+K++L EP + + Y LL NIYA +RW+ +VR + +KK PG ++IE+N
Sbjct: 559 AAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAH 618
Query: 506 EFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAI 565
EFVAGDKSH Q ++IY ++E+ +E A Y+P TS++L + + + +A
Sbjct: 619 EFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELLFEAGD----------AYSVAN 668
Query: 566 AFALLNTPPGT 576
F L+ PGT
Sbjct: 669 RFVRLSGHPGT 679
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 179/398 (44%), Gaps = 77/398 (19%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACA-GLSDLRLGKA 164
D ++N +I+ ++ G++LY ML+ GV P+ T+PF+L L GK
Sbjct: 98 DVVVWNNMIKGWSKV-DCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKK 156
Query: 165 VHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWS 224
+H VVKFG +L+VQN ++ MY +A VFD K D +W+
Sbjct: 157 LHCHVVKFGLGSNLYVQNALVKMYSLCGLMD-----------MARGVFDRRCKEDVFSWN 205
Query: 225 AMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWK 284
MI GY R ++ L EM+ V P +T++ VL+AC+ + +L K + Y+
Sbjct: 206 LMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSEC 265
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGR-------- 336
K S+ L NAL++ +A CG++D A+ +FR M + ++SWTS++ G G
Sbjct: 266 KTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYF 325
Query: 337 -----------------------GSEAVSLFDEMVEQGVEPDDVSFIGVLSACCH----- 368
+E++ +F EM G+ PD+ + + VL+AC H
Sbjct: 326 DQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLE 385
Query: 369 -----SKLVDKGRSYFNSMEGNFGI-----------VPKIEH---------YGCMVDLLS 403
+DK + + + GN I K+ H + MV L+
Sbjct: 386 IGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLA 445
Query: 404 RAGFVKEALDF---VRTMPVEPNQIIWRSIITACHARG 438
G +EA+ ++ M ++P+ I + +++AC+ G
Sbjct: 446 NNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSG 483
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 109/242 (45%), Gaps = 9/242 (3%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACA- 266
A K+F + P+ D V W+ MI G+++ V L+ M GV PD T +L
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146
Query: 267 DLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTS 326
D GAL GK L ++ + ++ + NAL+ M++ CG +D A +F + + SW
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSK---LVDKGRSYFNSME 383
+I G E++ L EM V P V+ + VLSAC K L + Y + +
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK 266
Query: 384 GNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLG 443
P + +V+ + G + A+ R+M + I W SI+ RG LKL
Sbjct: 267 TE----PSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYVERGNLKLA 321
Query: 444 ES 445
+
Sbjct: 322 RT 323
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 332 bits (852), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 173/488 (35%), Positives = 275/488 (56%), Gaps = 17/488 (3%)
Query: 145 TYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXX 204
T+ +L+A AGL + +GK +H +K G D+ V +I MY
Sbjct: 226 TFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIED-------- 277
Query: 205 XXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTA 264
A F+ P+ +V W+ +I GYA G+S A+ L +M+ GV D+ T+ ++
Sbjct: 278 ---ARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRI 334
Query: 265 CADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSW 324
L LEL K + + + AL+D ++K G VD A +F ++ I+SW
Sbjct: 335 STKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISW 394
Query: 325 TSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEG 384
+++ G A HGRG++AV LF++M+ V P+ V+F+ VLSAC +S L ++G F SM
Sbjct: 395 NALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSE 454
Query: 385 NFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGE 444
GI P+ HY CM++LL R G + EA+ F+R P++ +W +++ AC + L+LG
Sbjct: 455 VHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGR 514
Query: 445 SISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEM 504
++++L P NYV++ N+Y + + + V E ++ +G+ +P T +E+ ++
Sbjct: 515 VVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQT 574
Query: 505 CEFVAGDKSHDQY-----KQIYEMVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKH 559
F++GD+ D Y +QIY+ VDE+ EI GY +L D+DE+++E H
Sbjct: 575 HSFLSGDR-FDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYH 633
Query: 560 SEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNG 619
SEKLAIA+ L+NTP P++I +N R+C++CH +FIS V RE+VVRD +RFHHFK G
Sbjct: 634 SEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEG 693
Query: 620 LCSCGDFW 627
CSCG +W
Sbjct: 694 KCSCGGYW 701
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 113/230 (49%), Gaps = 20/230 (8%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+N +I +A S+ + LY M GV ++FT +++ L+ L L K H S+
Sbjct: 293 WNNVIAGYALHGYSEEALCLLY-DMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASL 351
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
++ GF+ ++ ++ Y A VFD+ P+ + ++W+A++GG
Sbjct: 352 IRNGFESEIVANTALVDFYSKWGRVDT-----------ARYVFDKLPRKNIISWNALMGG 400
Query: 230 YARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKI--- 286
YA G + AV LF +M V P+ +T ++VL+ACA G E G W E ++ ++
Sbjct: 401 YANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQG-W-EIFLSMSEVHGI 458
Query: 287 -PKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVS-WTSVIVGLAMH 334
P+++ +I++ + G +D+A+ R+ T V+ W +++ M
Sbjct: 459 KPRAMHYA-CMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQ 507
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 331 bits (848), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 174/506 (34%), Positives = 278/506 (54%), Gaps = 27/506 (5%)
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIH 186
L+L+ ++ GV + F + VLKACA L +L LGK +H V K G + ++ V ++
Sbjct: 269 ALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVD 328
Query: 187 MYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM 246
Y A + F E + + V+WSA+I GY + AV F+ +
Sbjct: 329 FYIKCSSFES-----------ACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSL 377
Query: 247 QVMGVCP-DEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGD 305
+ + T S+ AC+ L +G + + + + S +ALI M++KCG
Sbjct: 378 RSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGC 437
Query: 306 VDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSA 365
+D A +F MD+ IV+WT+ I G A +G SEA+ LF++MV G++P+ V+FI VL+A
Sbjct: 438 LDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTA 497
Query: 366 CCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQI 425
C H+ LV++G+ ++M + + P I+HY CM+D+ +R+G + EAL F++ MP EP+ +
Sbjct: 498 CSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAM 557
Query: 426 IWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMD 485
W+ ++ C L+LGE +EL + +P + YVL N+Y +WE+ ++ ++M+
Sbjct: 558 SWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMN 617
Query: 486 MRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLL 545
R +KK + I+ ++ F+ GDK H Q ++IYE + E G++ +
Sbjct: 618 ERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFD------GFMEGD---MF 668
Query: 546 DIDEEDKEDALYKHSEKLAIAFALL----NTPPGTPIRIVKNLRVCEDCHSATKFISKVY 601
+ ++ + L HSE+LAIAF L+ N P PI++ KNLR C DCH K +S V
Sbjct: 669 QCNMTERREQLLDHSERLAIAFGLISVHGNAP--APIKVFKNLRACPDCHEFAKHVSLVT 726
Query: 602 NREIVVRDRNRFHHFKNGLCSCGDFW 627
EIV+RD RFHHFK G CSC D+W
Sbjct: 727 GHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 147/310 (47%), Gaps = 15/310 (4%)
Query: 125 SSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDD-DLHVQNT 183
+ + + M + GV + ++Y + +AC L L G+ +H + + G ++ + +QN
Sbjct: 65 NEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRM-RMGIENPSVLLQNC 123
Query: 184 MIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLF 243
++ MY A K+FDE + ++V+ + MI YA +G +AVGLF
Sbjct: 124 VLQMYCECRSLED-----------ADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLF 172
Query: 244 REMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKC 303
M G P ++L + + AL+ G+ + +++ + + + +++M+ KC
Sbjct: 173 SGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKC 232
Query: 304 GDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVL 363
G + A +F QM V+ T ++VG GR +A+ LF ++V +GVE D F VL
Sbjct: 233 GWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVL 292
Query: 364 SACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPN 423
AC + ++ G+ ++ G+ ++ +VD + + A + + EPN
Sbjct: 293 KACASLEELNLGKQ-IHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR-EPN 350
Query: 424 QIIWRSIITA 433
+ W +II+
Sbjct: 351 DVSWSAIISG 360
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/498 (34%), Positives = 280/498 (56%), Gaps = 57/498 (11%)
Query: 67 NPLVLTKFAATSSTFNAIHYATS-FLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKS 125
+ V+ + ST +++ YA F + +P + +L+ +I F + +S +
Sbjct: 60 DAFVVFELIRVCSTLDSVDYAYDVFSYVSNP---------NVYLYTAMIDGFVSSGRS-A 109
Query: 126 SGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMI 185
G+ LY M+ V+P+ + VLKAC DL++ + +H V+K GF V M+
Sbjct: 110 DGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMM 165
Query: 186 HMYXXXXXXXXXXXXXXXXXXLAGKVFDESPK---------------------------- 217
+Y A K+FDE P
Sbjct: 166 EIYGKSGELVN-----------AKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQD 214
Query: 218 ---TDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELG 274
D+V W+AMI G R ++A+ LFREMQ+ V +E T V VL+AC+DLGALELG
Sbjct: 215 VKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELG 274
Query: 275 KWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMH 334
+W+ S++E +++ S + NALI+M+++CGD+++A +FR M ++S+ ++I GLAMH
Sbjct: 275 RWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMH 334
Query: 335 GRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEH 394
G EA++ F +MV +G P+ V+ + +L+AC H L+D G FNSM+ F + P+IEH
Sbjct: 335 GASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEH 394
Query: 395 YGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNE 454
YGC+VDLL R G ++EA F+ +P+EP+ I+ ++++AC G ++LGE I+K L +E
Sbjct: 395 YGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESE 454
Query: 455 PTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSH 514
YVLLSN+YA +W++ T++RE M G++K PG + IE++N++ EF+ GD +H
Sbjct: 455 NPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAH 514
Query: 515 DQYKQIYEMVDEMGREIK 532
+ IY+ + E+ R ++
Sbjct: 515 PHKEAIYQRLQELNRILR 532
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 162/399 (40%), Gaps = 82/399 (20%)
Query: 149 VLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLA 208
VL++C ++ + ++H +++ D D V +I + A
Sbjct: 35 VLRSCKNIAHV---PSIHAKIIRTFHDQDAFVVFELIRV-----------CSTLDSVDYA 80
Query: 209 GKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADL 268
VF + ++AMI G+ G S+ V L+ M V PD + SVL AC DL
Sbjct: 81 YDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC-DL 139
Query: 269 GA--------LELGKWLESYIEWKKIP---KSVELCNA-----------------LIDMF 300
L+LG + K + KS EL NA +I+ +
Sbjct: 140 KVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCY 199
Query: 301 AKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFI 360
++CG + +A+ LF+ + V WT++I GL + ++A+ LF EM + V ++ + +
Sbjct: 200 SECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAV 259
Query: 361 GVLSAC-----------CHSKLVDKGRSYFNSMEGN------------------FGIV-- 389
VLSAC HS V+ R ++ GN F ++
Sbjct: 260 CVLSACSDLGALELGRWVHS-FVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRD 318
Query: 390 PKIEHYGCMVDLLSRAGFVKEALDFVRTM---PVEPNQIIWRSIITACHARGELKLGESI 446
+ Y M+ L+ G EA++ R M PNQ+ +++ AC G L +G +
Sbjct: 319 KDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEV 378
Query: 447 ---SKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVRE 482
K + EP E +Y + ++ ++ R E+ + E
Sbjct: 379 FNSMKRVFNVEPQIE-HYGCIVDLLGRVGRLEEAYRFIE 416
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 100/224 (44%), Gaps = 38/224 (16%)
Query: 257 TMVSVLTACADLGALEL--GKWLESYIEWKK--IPKSVELCNALIDMFAKCGDVDKAMNL 312
T++SVL +C ++ + K + ++ + + + + +C+ L VD A ++
Sbjct: 31 TLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTL-------DSVDYAYDV 83
Query: 313 FRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSAC------ 366
F + + + +T++I G GR ++ VSL+ M+ V PD+ VL AC
Sbjct: 84 FSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCR 143
Query: 367 -CHSKLVDKG----RS--------YFNSME-----GNFGIVPKIEHYGC--MVDLLSRAG 406
H++++ G RS Y S E F +P +H M++ S G
Sbjct: 144 EIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECG 203
Query: 407 FVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKEL 450
F+KEAL+ + + ++ + + W ++I E+ + +E+
Sbjct: 204 FIKEALELFQDVKIK-DTVCWTAMIDGLVRNKEMNKALELFREM 246
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 325 bits (833), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 181/585 (30%), Positives = 305/585 (52%), Gaps = 68/585 (11%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +N+L+ +A SK + + + + M G+ P+ + +L+A A L+LGKA+
Sbjct: 189 DIVTWNSLLSGYASKGLSKDA-IAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAI 247
Query: 166 HGSVVKFGFDDDLHVQNTMIHMY------------------------XXXXXXXXXXXXX 201
HG +++ D++V+ T+I MY
Sbjct: 248 HGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLL 307
Query: 202 XXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSV 261
L ++ E K D++TW+++ GYA G +A+ + +M+ GV P+ ++ ++
Sbjct: 308 KDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAI 367
Query: 262 LTACAD--------------------------------LGALEL---GKWLESYIEWKKI 286
+ C+ LG L L GK + + K +
Sbjct: 368 FSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNL 427
Query: 287 PKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDE 346
+ AL+DM+ K GD+ A+ +F + + ++ SW +++G AM GRG E ++ F
Sbjct: 428 ICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSV 487
Query: 347 MVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAG 406
M+E G+EPD ++F VLS C +S LV +G YF+ M +GI+P IEH CMVDLL R+G
Sbjct: 488 MLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSG 547
Query: 407 FVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSN 466
++ EA DF++TM ++P+ IW + +++C +L+L E K L EP + +NY+++ N
Sbjct: 548 YLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMIN 607
Query: 467 IYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSH----DQYKQIYE 522
+Y+ L RWE ++R +M ++ + I+++ + F A K+H D Y ++Y+
Sbjct: 608 LYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYK 667
Query: 523 MVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVK 582
+V EM K++GYVP TS + DI + +KE L H+EKLA+ + L+ PIR+VK
Sbjct: 668 LVSEM----KKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVK 723
Query: 583 NLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
N +C D H+ K++S + NREIV+++ R HHF++G CSC D W
Sbjct: 724 NTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 148/335 (44%), Gaps = 54/335 (16%)
Query: 161 LGKAVHGSVVKFGFDD-DLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTD 219
LG +HG ++K G D+ D V + + Y A K+FDE PK D
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLG-----------FANKLFDEMPKRD 53
Query: 220 SVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLES 279
+ W+ ++ R G+ +AV LFREMQ G + TMV +L C++ G+ +
Sbjct: 54 DLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHG 113
Query: 280 YIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSE 339
Y+ + +V +CN+LI M+++ G ++ + +F M + SW S++ G +
Sbjct: 114 YVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDD 173
Query: 340 AVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMV 399
A+ L DEM G++PD V++ +LS
Sbjct: 174 AIGLLDEMEICGLKPDIVTWNSLLSG---------------------------------- 199
Query: 400 DLLSRAGFVKEALDFVRTMPV---EPNQIIWRSIITACHARGELKLGESISKELLRNEPT 456
+ G K+A+ ++ M + +P+ S++ A G LKLG++I +LRN+
Sbjct: 200 --YASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLW 257
Query: 457 HESNYV--LLSNIYAKLRRWEQKTKVREMMDMRGM 489
++ YV L ++Y K V +MMD + +
Sbjct: 258 YDV-YVETTLIDMYIKTGYLPYARMVFDMMDAKNI 291
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 145/342 (42%), Gaps = 63/342 (18%)
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIH 186
++L+R M G T +L+ C+ G+ +HG V++ G + ++ + N++I
Sbjct: 73 AVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIV 132
Query: 187 MYXXXXXXXXXXXXXXXXXXL--------------------AGKVFDE----SPKTDSVT 222
MY A + DE K D VT
Sbjct: 133 MYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVT 192
Query: 223 WSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIE 282
W++++ GYA +G S A+ + + MQ+ G+ P ++ S+L A A+ G L+LGK + YI
Sbjct: 193 WNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYIL 252
Query: 283 WKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVS 342
++ V + LIDM+ K G + A +F MD+ IV+W S++ GL+ +A +
Sbjct: 253 RNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEA 312
Query: 343 LFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLL 402
L M ++G++PD ++ +NS+ + + K E
Sbjct: 313 LMIRMEKEGIKPDAIT--------------------WNSLASGYATLGKPE--------- 343
Query: 403 SRAGFVKEALDFVRTMP---VEPNQIIWRSIITACHARGELK 441
+ALD + M V PN + W +I + C G +
Sbjct: 344 -------KALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFR 378
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 319 bits (818), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 189/574 (32%), Positives = 306/574 (53%), Gaps = 33/574 (5%)
Query: 73 KFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFL------FNTLIRAFAHTPQSKSS 126
K S TF H S++ + TA + FD + ++I + + +++
Sbjct: 57 KLGFASDTFTVNHLVISYVKLKEINTARKL--FDEMCEPNVVSWTSVISGYNDMGKPQNA 114
Query: 127 GLQLYRTMLR-YGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMI 185
L +++ M V PN++T+ V KAC+ L++ R+GK +H + G ++ V ++++
Sbjct: 115 -LSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLV 173
Query: 186 HMYXXXXXXXXXXXXXXXXXXLAGKVFDE--SPKTDSVTWSAMIGGYARRGHSSRAVGLF 243
MY A +VFD + V+W++MI YA+ A+ LF
Sbjct: 174 DMYGKCNDVET-----------ARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELF 222
Query: 244 REMQVMGVC--PDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFA 301
R ++ + SV++AC+ LG L+ GK + + + +L+DM+A
Sbjct: 223 RSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYA 282
Query: 302 KCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIG 361
KCG + A +F ++ +++S+TS+I+ A HG G AV LFDEMV + P+ V+ +G
Sbjct: 283 KCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLG 342
Query: 362 VLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPV- 420
VL AC HS LV++G Y + M +G+VP HY C+VD+L R G V EA + +T+ V
Sbjct: 343 VLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVG 402
Query: 421 -EPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTK 479
E ++W ++++A G +++ SK L+++ S Y+ LSN YA WE
Sbjct: 403 AEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSES 462
Query: 480 VREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGY--- 536
+R M G K + IE + + F AGD S D+ +I + ++ + +K G+
Sbjct: 463 LRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGS 522
Query: 537 ---VPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSA 593
+ T+S V +D+DEE K++ + H E+LA+A+ LL+ P G+ IRI+ NLR+C DCH A
Sbjct: 523 SSMITTSSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEA 582
Query: 594 TKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
K IS++ REIVVRD NRFH FKNG C+C D+W
Sbjct: 583 FKLISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 100/203 (49%), Gaps = 14/203 (6%)
Query: 145 TYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXX 204
T F++ + ++ +H +K GF D N ++ Y
Sbjct: 31 TKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINT-------- 82
Query: 205 XXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM-QVMGVCPDEITMVSVLT 263
A K+FDE + + V+W+++I GY G A+ +F++M + V P+E T SV
Sbjct: 83 ---ARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFK 139
Query: 264 ACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSC--TI 321
AC+ L +GK + + +E + +++ + ++L+DM+ KC DV+ A +F M +
Sbjct: 140 ACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNV 199
Query: 322 VSWTSVIVGLAMHGRGSEAVSLF 344
VSWTS+I A + RG EA+ LF
Sbjct: 200 VSWTSMITAYAQNARGHEAIELF 222
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 315 bits (808), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 184/563 (32%), Positives = 297/563 (52%), Gaps = 17/563 (3%)
Query: 65 INNPLVLTKFAATSSTFNAI--HYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQ 122
I+ ++ T FA S N++ Y + + + R D + T+I + +
Sbjct: 319 IHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFL 378
Query: 123 SKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQN 182
+ + YR M + V P++ T VL ACA L DL G +H +K + V N
Sbjct: 379 PDKA-IDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVAN 437
Query: 183 TMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGL 242
+I+MY A +F P+ + ++W+++I G A+
Sbjct: 438 NLINMYSKCKCIDK-----------ALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIF 486
Query: 243 FREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAK 302
R+M+ M + P+ IT+ + L ACA +GAL GK + +++ + L NAL+DM+ +
Sbjct: 487 LRQMK-MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVR 545
Query: 303 CGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGV 362
CG ++ A + F + SW ++ G + G+GS V LFD MV+ V PD+++FI +
Sbjct: 546 CGRMNTAWSQFNSQKK-DVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISL 604
Query: 363 LSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEP 422
L C S++V +G YF+ ME ++G+ P ++HY C+VDLL RAG ++EA F++ MPV P
Sbjct: 605 LCGCSKSQMVRQGLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTP 663
Query: 423 NQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVRE 482
+ +W +++ AC ++ LGE ++ + + Y+LL N+YA +W + KVR
Sbjct: 664 DPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRR 723
Query: 483 MMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQ 542
MM G+ G + +E+ ++ F++ DK H Q K+I +++ ++ G +
Sbjct: 724 MMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISES 783
Query: 543 VLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYN 602
+D E +++ HSE+ AIAF L+NT PG PI + KNL +CE+CH KFISK
Sbjct: 784 SSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVR 843
Query: 603 REIVVRDRNRFHHFKNGLCSCGD 625
REI VRD FHHFK+G CSCGD
Sbjct: 844 REISVRDAEHFHHFKDGECSCGD 866
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 164/333 (49%), Gaps = 13/333 (3%)
Query: 101 RASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLR 160
+ S + F +N L+ +A + +R + GV P+ +T+P VL+ C G+ DL
Sbjct: 154 KMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLA 213
Query: 161 LGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDS 220
GK VH VV++G++ D+ V N +I MY A +FD P+ D
Sbjct: 214 RGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKS-----------ARLLFDRMPRRDI 262
Query: 221 VTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESY 280
++W+AMI GY G + LF M+ + V PD +T+ SV++AC LG LG+ + +Y
Sbjct: 263 ISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAY 322
Query: 281 IEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEA 340
+ + +CN+L M+ G +A LF +M+ IVSWT++I G + +A
Sbjct: 323 VITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKA 382
Query: 341 VSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVD 400
+ + M + V+PD+++ VLSAC +D G + + ++ + +++
Sbjct: 383 IDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE-LHKLAIKARLISYVIVANNLIN 441
Query: 401 LLSRAGFVKEALDFVRTMPVEPNQIIWRSIITA 433
+ S+ + +ALD +P N I W SII
Sbjct: 442 MYSKCKCIDKALDIFHNIP-RKNVISWTSIIAG 473
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 37/293 (12%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLF-REMQVMGVCPDEITMVSVLTACA 266
A VF + + + +W+ ++GGYA++G+ A+ L+ R + V GV PD T VL C
Sbjct: 148 AWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCG 207
Query: 267 DLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTS 326
+ L GK + ++ +++ NALI M+ KCGDV A LF +M I+SW +
Sbjct: 208 GIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNA 267
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSAC-----------CHSKLVDKG 375
+I G +G E + LF M V+PD ++ V+SAC H+ ++ G
Sbjct: 268 MISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTG 327
Query: 376 ------------RSYFNS-----MEGNFGIVPK--IEHYGCMVDLLSRAGFVKEALDFVR 416
+ Y N+ E F + + I + M+ +A+D R
Sbjct: 328 FAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYR 387
Query: 417 TM---PVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSN 466
M V+P++I ++++AC G+L G + K ++ +YV+++N
Sbjct: 388 MMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI---SYVIVAN 437
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 121/305 (39%), Gaps = 37/305 (12%)
Query: 229 GYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPK 288
G G A+ L MQ + V DE V+++ C A E G + S
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 289 SVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMV 348
VEL NA + MF + G++ A +F +M + SW ++ G A G EA+ L+ M+
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 349 E-QGVEPDDVSFIGVLSAC-----------CHSKLVDKGRSY-----------------F 379
GV+PD +F VL C H +V G
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 380 NSMEGNFGIVPK--IEHYGCMVDLLSRAGFVKEALDF---VRTMPVEPNQIIWRSIITAC 434
S F +P+ I + M+ G E L+ +R + V+P+ + S+I+AC
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 435 HARGELKLGESISKELLRNEPTHESNYV-LLSNIYAKLRRWEQKTKVREMMDMRGMKKVP 493
G+ +LG I ++ + + L+ +Y W + K+ M+ + + V
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDI--VS 365
Query: 494 GSTMI 498
+TMI
Sbjct: 366 WTTMI 370
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 309 bits (792), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 151/449 (33%), Positives = 259/449 (57%), Gaps = 21/449 (4%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +N LI + +++ + + +Y+ M GV P+ T ++ +C+ L DL GK
Sbjct: 221 DLVSWNCLINGYKKIGEAEKA-IYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEF 279
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXX--------------------XXXXXXXXXXXXXXX 205
+ V + G + + N ++ M+
Sbjct: 280 YEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLL 339
Query: 206 XLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTAC 265
++ K+FD+ + D V W+AMIGG + A+ LF+EMQ PDEITM+ L+AC
Sbjct: 340 DVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSAC 399
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
+ LGAL++G W+ YIE + +V L +L+DM+AKCG++ +A+++F + + +++T
Sbjct: 400 SQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYT 459
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
++I GLA+HG S A+S F+EM++ G+ PD+++FIG+LSACCH ++ GR YF+ M+
Sbjct: 460 AIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSR 519
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGES 445
F + P+++HY MVDLL RAG ++EA + +MP+E + +W +++ C G ++LGE
Sbjct: 520 FNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEK 579
Query: 446 ISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMC 505
+K+LL +P+ YVLL +Y + WE + R MM+ RG++K+PG + IE+N +C
Sbjct: 580 AAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVC 639
Query: 506 EFVAGDKSHDQYKQIYEMVDEMGREIKRA 534
EF+ DKS + ++IY+ + +GR ++ +
Sbjct: 640 EFIVRDKSRPESEKIYDRLHCLGRHMRSS 668
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 185/380 (48%), Gaps = 48/380 (12%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVV---PNKFTYPFVLKACAGLSDLRLG 162
+ F +N IR F+ + K S L LY+ MLR+G P+ FTYP + K CA L LG
Sbjct: 117 NIFSWNVTIRGFSESENPKESFL-LYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175
Query: 163 KAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVT 222
+ G V+K + HV N IHM+ A KVFDESP D V+
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFASCGDMEN-----------ARKVFDESPVRDLVS 224
Query: 223 WSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIE 282
W+ +I GY + G + +A+ +++ M+ GV PD++TM+ ++++C+ LG L GK Y++
Sbjct: 225 WNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVK 284
Query: 283 WKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHG------- 335
+ ++ L NAL+DMF+KCGD+ +A +F ++ TIVSWT++I G A G
Sbjct: 285 ENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRK 344
Query: 336 ------------------------RGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKL 371
RG +A++LF EM +PD+++ I LSAC
Sbjct: 345 LFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGA 404
Query: 372 VDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSII 431
+D G +E + + + +VD+ ++ G + EAL + N + + +II
Sbjct: 405 LDVGIWIHRYIE-KYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAII 462
Query: 432 TACHARGELKLGESISKELL 451
G+ S E++
Sbjct: 463 GGLALHGDASTAISYFNEMI 482
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 152/439 (34%), Positives = 257/439 (58%), Gaps = 13/439 (2%)
Query: 101 RASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLR 160
+ +S D +F +I + H S L+++R +++ + PN+ T +L L L+
Sbjct: 400 QCNSVDVVVFTAMISGYLHNGLYIDS-LEMFRWLVKVKISPNEITLVSILPVIGILLALK 458
Query: 161 LGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDS 220
LG+ +HG ++K GFD+ ++ +I MY LA ++F+ K D
Sbjct: 459 LGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMN-----------LAYEIFERLSKRDI 507
Query: 221 VTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESY 280
V+W++MI A+ + S A+ +FR+M V G+C D +++ + L+ACA+L + GK + +
Sbjct: 508 VSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGF 567
Query: 281 IEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEA 340
+ + V + LIDM+AKCG++ AMN+F+ M IVSW S+I HG+ ++
Sbjct: 568 MIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDS 627
Query: 341 VSLFDEMVEQ-GVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMV 399
+ LF EMVE+ G+ PD ++F+ ++S+CCH VD+G +F SM ++GI P+ EHY C+V
Sbjct: 628 LCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVV 687
Query: 400 DLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHES 459
DL RAG + EA + V++MP P+ +W +++ AC ++L E S +L+ +P++
Sbjct: 688 DLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSG 747
Query: 460 NYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQ 519
YVL+SN +A R WE TKVR +M R ++K+PG + IE+N FV+GD +H +
Sbjct: 748 YYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSH 807
Query: 520 IYEMVDEMGREIKRAGYVP 538
IY +++ + E++ GY+P
Sbjct: 808 IYSLLNSLLGELRLEGYIP 826
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 166/356 (46%), Gaps = 14/356 (3%)
Query: 86 YATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFT 145
Y+ F D S D +N +I + + + S L + M+ GV+P+ T
Sbjct: 284 YSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEES-LTFFYEMISSGVLPDAIT 342
Query: 146 YPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXX 205
+ +L + + +L K +H +++ D+ + + +I Y
Sbjct: 343 FSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVS---------- 392
Query: 206 XLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTAC 265
+A +F + D V ++AMI GY G ++ +FR + + + P+EIT+VS+L
Sbjct: 393 -MAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVI 451
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
L AL+LG+ L +I K + A+IDM+AKCG ++ A +F ++ IVSW
Sbjct: 452 GILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWN 511
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
S+I A S A+ +F +M G+ D VS LSAC + G++ M +
Sbjct: 512 SMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKH 571
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELK 441
+ + ++D+ ++ G +K A++ +TM E N + W SII AC G+LK
Sbjct: 572 -SLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGKLK 625
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 120/254 (47%), Gaps = 12/254 (4%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+N++I +F + L Y ML +GV P+ T+P ++KAC L + + + +V
Sbjct: 106 WNSIISSFVRNGL-LNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTV 164
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
G D + V +++I Y + K+FD + D V W+ M+ G
Sbjct: 165 SSLGMDCNEFVASSLIKAYLEYGKID-----------VPSKLFDRVLQKDCVIWNVMLNG 213
Query: 230 YARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKS 289
YA+ G + F M++ + P+ +T VL+ CA ++LG L + +
Sbjct: 214 YAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFE 273
Query: 290 VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVE 349
+ N+L+ M++KCG D A LFR M V+W +I G G E+++ F EM+
Sbjct: 274 GSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMIS 333
Query: 350 QGVEPDDVSFIGVL 363
GV PD ++F +L
Sbjct: 334 SGVLPDAITFSSLL 347
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 123/300 (41%), Gaps = 25/300 (8%)
Query: 140 VPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXX 199
+P + + +L+AC+ + LR GK VH ++ D + ++ MY
Sbjct: 34 IPRRLS--LLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSD--- 88
Query: 200 XXXXXXXLAGKVFD--ESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEIT 257
GK+F + ++ W+++I + R G ++A+ + +M GV PD T
Sbjct: 89 --------CGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVST 140
Query: 258 MVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD 317
++ AC L + +L + + + + ++LI + + G +D LF ++
Sbjct: 141 FPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVL 200
Query: 318 SCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRS 377
V W ++ G A G + F M + P+ V+F VLS C L+D G
Sbjct: 201 QKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQ 260
Query: 378 YFNSMEGNFGIVPKIEHYG----CMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITA 433
+ +V ++ G ++ + S+ G +A R M + + W +I+
Sbjct: 261 LHGLV-----VVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTWNCMISG 314
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 304 bits (778), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 176/506 (34%), Positives = 287/506 (56%), Gaps = 50/506 (9%)
Query: 74 FAATSSTFNAIHYATSFL--FSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLY 131
F+A SS+ + + YA FL SD P + +N +IR F+++ + S + +Y
Sbjct: 49 FSALSSSGD-VDYAYKFLSKLSDPPN----------YGWNFVIRGFSNSRNPEKS-ISVY 96
Query: 132 RTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXX 191
MLR+G++P+ TYPF++K+ + LS+ +LG ++H SVVK G + DL + NT+IHMY
Sbjct: 97 IQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSF 156
Query: 192 XXXXXX--------------------XXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYA 231
A VFDE + D VTWS+MI GY
Sbjct: 157 RDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYV 216
Query: 232 RRGHSSRAVGLFREMQVMGVC-PDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSV 290
+RG ++A+ +F +M MG +E+TMVSV+ ACA LGAL GK + YI +P +V
Sbjct: 217 KRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTV 276
Query: 291 ELCNALIDMFAKCGDVDKAMNLFRQ--MDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMV 348
L +LIDM+AKCG + A ++F + + + W ++I GLA HG E++ LF +M
Sbjct: 277 ILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMR 336
Query: 349 EQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFV 408
E ++PD+++F+ +L+AC H LV + +F S++ + G PK EHY CMVD+LSRAG V
Sbjct: 337 ESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEPKSEHYACMVDVLSRAGLV 395
Query: 409 KEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIY 468
K+A DF+ MP++P + +++ C G L+L E++ K+L+ +P ++ YV L+N+Y
Sbjct: 396 KDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVY 455
Query: 469 AKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMG 528
A +++ +RE M+ +G+KK+ G ++++L+ F+A DK+H +IY ++ G
Sbjct: 456 AINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVLQLTG 515
Query: 529 REIKRAGYVPTTSQVLLDIDEEDKED 554
+ LD+D +D+++
Sbjct: 516 AWMN------------LDVDYDDQDN 529
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/524 (32%), Positives = 273/524 (52%), Gaps = 18/524 (3%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+N L+ F + L+L+ ML+ GV F+ + AC +S+ ++ + +HG
Sbjct: 385 YNALMAGFCRNGHGLKA-LKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFC 443
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKT--DSVTWSAMI 227
+KFG + +Q ++ M A ++FD+ P S +++I
Sbjct: 444 IKFGTAFNPCIQTALLDMCTRCERMAD-----------AEEMFDQWPSNLDSSKATTSII 492
Query: 228 GGYARRGHSSRAVGLF-REMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKI 286
GGYAR G +AV LF R + + DE+++ +L C LG E+G + Y
Sbjct: 493 GGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGY 552
Query: 287 PKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDE 346
+ L N+LI M+AKC D D A+ +F M ++SW S+I + G EA++L+
Sbjct: 553 FSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSR 612
Query: 347 MVEQGVEPDDVSFIGVLSA--CCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSR 404
M E+ ++PD ++ V+SA S + R F SM+ + I P EHY V +L
Sbjct: 613 MNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGH 672
Query: 405 AGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLL 464
G ++EA D + +MPV+P + R+++ +C + + ++K +L +P S Y+L
Sbjct: 673 WGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILK 732
Query: 465 SNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMV 524
SNIY+ W + +RE M RG +K P + I N++ F A D SH Q K IY +
Sbjct: 733 SNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGL 792
Query: 525 DEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPP-GTPIRIVKN 583
+ + E + GY P T VL ++DE K+ L+ HS KLA+ + +L++ G P+R++KN
Sbjct: 793 EILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVMKN 852
Query: 584 LRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
+ +C DCH K+IS V REIV+RD + FHHF NG CSC D W
Sbjct: 853 VMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 42/273 (15%)
Query: 127 GLQLYRTMLRYGVV-PNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMI 185
L+++ M + G+V PN++T+ +L AC +S LG +HG +VK GF + + V N+++
Sbjct: 164 ALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLM 223
Query: 186 HMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFRE 245
+Y K+FDE P+ D +W+ ++ + G S +A LF E
Sbjct: 224 SLYDKDSGSSCDDVL---------KLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYE 274
Query: 246 M-QVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCG 304
M +V G D T+ ++L++C D L G+ L + + + + NALI ++K
Sbjct: 275 MNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFW 334
Query: 305 D-------------------------------VDKAMNLFRQMDSCTIVSWTSVIVGLAM 333
D VD A+ +F + +++ +++ G
Sbjct: 335 DMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCR 394
Query: 334 HGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSAC 366
+G G +A+ LF +M+++GVE D S + AC
Sbjct: 395 NGHGLKALKLFTDMLQRGVELTDFSLTSAVDAC 427
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 16/233 (6%)
Query: 148 FVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXL 207
++L+ A D+ + KAVH S +K ++ + N +I Y
Sbjct: 85 YLLRLSAQYHDVEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPRE----------- 132
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMG-VCPDEITMVSVLTACA 266
A VF V+++A+I G++R A+ +F M+ G V P+E T V++LTAC
Sbjct: 133 AILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACV 192
Query: 267 DLGALELGKWLESYIEWKKIPKSVELCNALIDMFAK--CGDVDKAMNLFRQMDSCTIVSW 324
+ LG + I SV + N+L+ ++ K D + LF ++ + SW
Sbjct: 193 RVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASW 252
Query: 325 TSVIVGLAMHGRGSEAVSLFDEMVE-QGVEPDDVSFIGVLSACCHSKLVDKGR 376
+V+ L G+ +A LF EM +G D + +LS+C S ++ +GR
Sbjct: 253 NTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGR 305
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 160/519 (30%), Positives = 274/519 (52%), Gaps = 16/519 (3%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+N +I +A + + L + + G+ P+ T +L A A L G+ +HG
Sbjct: 301 WNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYA 356
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
++ GF + ++ +I MY A +FD + + ++W+++I
Sbjct: 357 MRRGFLPHMVLETALIDMYGECGQLKS-----------AEVIFDRMAEKNVISWNSIIAA 405
Query: 230 YARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKS 289
Y + G + A+ LF+E+ + PD T+ S+L A A+ +L G+ + +YI + +
Sbjct: 406 YVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSN 465
Query: 290 VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVE 349
+ N+L+ M+A CGD++ A F + +VSW S+I+ A+HG G +V LF EM+
Sbjct: 466 TIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIA 525
Query: 350 QGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVK 409
V P+ +F +L+AC S +VD+G YF SM+ +GI P IEHYGCM+DL+ R G
Sbjct: 526 SRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFS 585
Query: 410 EALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYA 469
A F+ MP P IW S++ A ++ + E ++++ + E + YVLL N+YA
Sbjct: 586 AAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYA 645
Query: 470 KLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGR 529
+ RWE +++ +M+ +G+ + + +E + F GD+SH +IYE++D + R
Sbjct: 646 EAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSR 705
Query: 530 EIKRAG-YVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCE 588
+ YV S++ + + + ++ +HS +LA F L++T G + + N R+C
Sbjct: 706 MVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICR 765
Query: 589 DCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
CH + S++ REIVV D FHHF NG CSCG++W
Sbjct: 766 KCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 113/355 (31%), Positives = 179/355 (50%), Gaps = 30/355 (8%)
Query: 86 YATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGL-----QLYRTMLRYGVV 140
+A S L D + DAFL+N +I+ F S GL Q Y M+ GV
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFT------SCGLYIEAVQFYSRMVFAGVK 127
Query: 141 PNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXX 200
+ FTYPFV+K+ AG+S L GK +H V+K GF D++V N++I +Y
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWD---- 183
Query: 201 XXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVS 260
A KVF+E P+ D V+W++MI GY G ++ LF+EM G PD + +S
Sbjct: 184 -------AEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMS 236
Query: 261 VLTACADLGALELGKWLESYIEWKKIPKS-VELCNALIDMFAKCGDVDKAMNLFRQMDSC 319
L AC+ + + ++GK + + +I V + +++DM++K G+V A +F M
Sbjct: 237 ALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQR 296
Query: 320 TIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQ-GVEPDDVSFIGVLSACCHSKLVDKGRSY 378
IV+W +I A +GR ++A F +M EQ G++PD ++ I +L A + +GR+
Sbjct: 297 NIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRT- 351
Query: 379 FNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITA 433
+ G +P + ++D+ G +K A + + E N I W SII A
Sbjct: 352 IHGYAMRRGFLPHMVLETALIDMYGECGQLKSA-EVIFDRMAEKNVISWNSIIAA 405
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 109/235 (46%), Gaps = 12/235 (5%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A ++FDE K D+ W+ MI G+ G AV + M GV D T V+ + A
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSV 327
+ +LE GK + + + V +CN+LI ++ K G A +F +M IVSW S+
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG 387
I G G G ++ LF EM++ G +PD S + L AC H G+
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCH-----A 257
Query: 388 IVPKIEHYGCMV-----DLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHAR 437
+ +IE MV D+ S+ G V A M ++ N + W +++ C+AR
Sbjct: 258 VRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAW-NVMIGCYAR 310
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 155/464 (33%), Positives = 255/464 (54%), Gaps = 47/464 (10%)
Query: 101 RASSFDAFLFNTLIRAFAHT-PQSKSSGLQLYRTMLRYGVV-PNKFTYPFVLKACAGLSD 158
R S + L+ ++ A++ + P SS +R M+ V PN F YP VLK+ LS
Sbjct: 82 RFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSS 141
Query: 159 LRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKT 218
VH + K GF + VQ ++H Y LA ++FDE +
Sbjct: 142 AFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHIT----------LARQLFDEMSER 191
Query: 219 DSVTWSAMIGGYARRGHSSRAVGLFREM---------QVMGVC----------------- 252
+ V+W+AM+ GYAR G S AV LF +M ++ C
Sbjct: 192 NVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMI 251
Query: 253 ------PDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDV 306
P+E+T+V VL+ACA G L+L K + ++ + + V + N+L+D++ KCG++
Sbjct: 252 NEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNL 311
Query: 307 DKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVE---QGVEPDDVSFIGVL 363
++A ++F+ ++ +W S+I A+HGR EA+++F+EM++ ++PD ++FIG+L
Sbjct: 312 EEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLL 371
Query: 364 SACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPN 423
+AC H LV KGR YF+ M FGI P+IEHYGC++DLL RAG EAL+ + TM ++ +
Sbjct: 372 NACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKAD 431
Query: 424 QIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREM 483
+ IW S++ AC G L L E K L+ P + +++N+Y ++ WE+ + R+M
Sbjct: 432 EAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKM 491
Query: 484 MDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEM 527
+ + K PG + IE++NE+ +F + DKSH + ++IY ++D +
Sbjct: 492 IKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 116/287 (40%), Gaps = 47/287 (16%)
Query: 211 VFDESPKTDSVTWSAMIGGYARRG--HSSRAVGLFREMQVMGVC-PDEITMVSVLTACAD 267
+FD ++ ++A++ Y+ H+S A FR M V P+ VL +
Sbjct: 79 IFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPY 138
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAK-CGDVDKAMNLFRQMDSCTIVSWTS 326
L + + +++ V + AL+ +A + A LF +M +VSWT+
Sbjct: 139 LSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTA 198
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNF 386
++ G A G S AV+LF++M E+ V S+ +L+AC + L + S F M
Sbjct: 199 MLSGYARSGDISNAVALFEDMPERDVP----SWNAILAACTQNGLFLEAVSLFRRM---- 250
Query: 387 GIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESI 446
+ + PN++ +++AC G L+L + I
Sbjct: 251 ----------------------------INEPSIRPNEVTVVCVLSACAQTGTLQLAKGI 282
Query: 447 SKELLRNEPTHESNYVLLSN----IYAKLRRWEQKTKVREMMDMRGM 489
R + + + V +SN +Y K E+ + V +M + +
Sbjct: 283 HAFAYRRDLSSD---VFVSNSLVDLYGKCGNLEEASSVFKMASKKSL 326
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 166/469 (35%), Positives = 255/469 (54%), Gaps = 30/469 (6%)
Query: 64 LINNPLVLTKFAATSSTFNAIHYA---TSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHT 120
L N+ ++++ SS A A T L S D T + +N L R ++ +
Sbjct: 41 LQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPST---------WNMLSRGYS-S 90
Query: 121 PQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHV 180
S + +Y M R G+ PNK T+PF+LKACA L G+ + V+K GFD D++V
Sbjct: 91 SDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYV 150
Query: 181 QNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAV 240
N +IH+Y A KVFDE + + V+W++++ G +
Sbjct: 151 GNNLIHLYGTCKKTSD-----------ARKVFDEMTERNVVSWNSIMTALVENGKLNLVF 199
Query: 241 GLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMF 300
F EM CPDE TMV +L+AC G L LGK + S + +++ + L AL+DM+
Sbjct: 200 ECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMY 257
Query: 301 AKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMV-EQGVEPDDVSF 359
AK G ++ A +F +M + +W+++IVGLA +G EA+ LF +M+ E V P+ V+F
Sbjct: 258 AKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTF 317
Query: 360 IGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP 419
+GVL AC H+ LVD G YF+ ME I P + HYG MVD+L RAG + EA DF++ MP
Sbjct: 318 LGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMP 377
Query: 420 VEPNQIIWRSIITAC---HARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQ 476
EP+ ++WR++++AC H + +GE + K L+ EP N V+++N +A+ R W +
Sbjct: 378 FEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAE 437
Query: 477 KTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVD 525
+VR +M MKK+ G + +EL F +G +Y IYE++D
Sbjct: 438 AAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELLD 486
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 155/434 (35%), Positives = 242/434 (55%), Gaps = 24/434 (5%)
Query: 131 YRTMLRYGVVPNKFTYPFVLKACAGLSDLR--LGKAVHGSVVKFGFD-DDLHVQNTMIHM 187
+ M GV PN T+ +L C + LG +HG K G D + + V +I M
Sbjct: 59 FSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGM 118
Query: 188 YXXXXXXXXXXX--------------------XXXXXXXLAGKVFDESPKTDSVTWSAMI 227
Y A K+FD+ P+ D ++W+AMI
Sbjct: 119 YSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMI 178
Query: 228 GGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIP 287
G+ ++G+ A+ FREMQ+ GV PD + +++ L AC +LGAL G W+ Y+ +
Sbjct: 179 NGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFK 238
Query: 288 KSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEM 347
+V + N+LID++ +CG V+ A +F M+ T+VSW SVIVG A +G E++ F +M
Sbjct: 239 NNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKM 298
Query: 348 VEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGF 407
E+G +PD V+F G L+AC H LV++G YF M+ ++ I P+IEHYGC+VDL SRAG
Sbjct: 299 QEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGR 358
Query: 408 VKEALDFVRTMPVEPNQIIWRSIITACHARG-ELKLGESISKELLRNEPTHESNYVLLSN 466
+++AL V++MP++PN+++ S++ AC G + L E + K L SNYV+LSN
Sbjct: 359 LEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSN 418
Query: 467 IYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDE 526
+YA +WE +K+R M G+KK PG + IE+++ M F+AGD +H + I E+++
Sbjct: 419 MYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLEL 478
Query: 527 MGREIKRAGYVPTT 540
+ +++ G V T
Sbjct: 479 ISSDLRLQGCVVET 492
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 166/432 (38%), Gaps = 101/432 (23%)
Query: 213 DESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADL--GA 270
++S +V+W++ I R G + A F +M + GV P+ IT +++L+ C D G+
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 271 LELGKWLESYI------------------------EWKKI--------PKSVELCNALID 298
LG L Y +KK K+ N +ID
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 299 MFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVS 358
+ + G VD A +F +M ++SWT++I G G EA+ F EM GV+PD V+
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 359 FIGVLSAC-----------------------------------CHSKLVDKGRSYFNSME 383
I L+AC C V+ R F +ME
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME 268
Query: 384 GNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRSIITACHARGEL 440
+ + ++ + G E+L + R M +P+ + + +TAC G +
Sbjct: 269 KR-----TVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLV 323
Query: 441 KLGE---SISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTM 497
+ G I K R P E +Y L ++Y++ R E K+ + M M+ + V GS +
Sbjct: 324 EEGLRYFQIMKCDYRISPRIE-HYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLL 382
Query: 498 IELNNEMCEFVAGD-----------KSHDQYKQI---------YEMVDEMGREIKRAGYV 537
+N V + KSH Y + +E +M R++K G
Sbjct: 383 AACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLK 442
Query: 538 PTTSQVLLDIDE 549
++ID+
Sbjct: 443 KQPGFSSIEIDD 454
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 288 bits (738), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 157/452 (34%), Positives = 253/452 (55%), Gaps = 32/452 (7%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+N+LI F + + L +++ ML V P++ T V+ ACA LS +++G+ VHG V
Sbjct: 221 WNSLITCFEQNGPAVEA-LDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 170 VKFG-FDDDLHVQNTMIHMYXX--------------------XXXXXXXXXXXXXXXXLA 208
VK +D+ + N + MY A
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339
Query: 209 GKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADL 268
+F + + + V+W+A+I GY + G + A+ LF ++ VCP + ++L ACADL
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADL 399
Query: 269 GALELGKWLESYIEWKKI--------PKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCT 320
L LG +++++ K + + N+LIDM+ KCG V++ +FR+M
Sbjct: 400 AELHLG--MQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERD 457
Query: 321 IVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFN 380
VSW ++I+G A +G G+EA+ LF EM+E G +PD ++ IGVLSAC H+ V++GR YF+
Sbjct: 458 CVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFS 517
Query: 381 SMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGEL 440
SM +FG+ P +HY CMVDLL RAGF++EA + MP++P+ +IW S++ AC +
Sbjct: 518 SMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNI 577
Query: 441 KLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIEL 500
LG+ ++++LL EP++ YVLLSN+YA+L +WE VR+ M G+ K PG + I++
Sbjct: 578 TLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKI 637
Query: 501 NNEMCEFVAGDKSHDQYKQIYEMVDEMGREIK 532
F+ DKSH + KQI+ ++D + E++
Sbjct: 638 QGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 181/391 (46%), Gaps = 52/391 (13%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +N+++ FA + + + L + M + G V N++++ VL AC+GL+D+ G V
Sbjct: 116 DQCTWNSMVSGFAQHDRCEEA-LCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQV 174
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H + K F D+++ + ++ MY A +VFDE + V+W++
Sbjct: 175 HSLIAKSPFLSDVYIGSALVDMYSKCGNVND-----------AQRVFDEMGDRNVVSWNS 223
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLES-YIEWK 284
+I + + G + A+ +F+ M V PDE+T+ SV++ACA L A+++G+ + ++
Sbjct: 224 LITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKND 283
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMN-------------------------------LF 313
K+ + L NA +DM+AKC + +A +F
Sbjct: 284 KLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMF 343
Query: 314 RQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVD 373
+M +VSW ++I G +G EA+SLF + + V P SF +L AC +
Sbjct: 344 TKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELH 403
Query: 374 KG-RSYFNSMEGNF----GIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWR 428
G +++ + ++ F G I ++D+ + G V+E R M +E + + W
Sbjct: 404 LGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWN 462
Query: 429 SIITACHARGELKLGESISKELLRN--EPTH 457
++I G + +E+L + +P H
Sbjct: 463 AMIIGFAQNGYGNEALELFREMLESGEKPDH 493
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 131/291 (45%), Gaps = 21/291 (7%)
Query: 163 KAVHGSVVKFGFDDDLHVQNTMIHMYXX--------------------XXXXXXXXXXXX 202
+ VH SV+K GF +++ +QN +I Y
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 203 XXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVL 262
A +F P+ D TW++M+ G+A+ A+ F M G +E + SVL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 263 TACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIV 322
+AC+ L + G + S I V + +AL+DM++KCG+V+ A +F +M +V
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 323 SWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM 382
SW S+I +G EA+ +F M+E VEPD+V+ V+SAC + G+ +
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 383 EGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITA 433
N + I VD+ ++ +KEA +MP+ N I S+I+
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR-NVIAETSMISG 329
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 132/280 (47%), Gaps = 55/280 (19%)
Query: 261 VLTACADLGALELGKWLESYIEWKKIP-KSVELCNALIDMFAKCGDVDKAMNLFRQM--- 316
++ A + G+LE G+ + + K+P +++ N+++ K G +D+A +LFR M
Sbjct: 61 LIDAYSKCGSLEDGRQV-----FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPER 115
Query: 317 DSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGR 376
D CT W S++ G A H R EA+ F M ++G ++ SF VLSAC ++KG
Sbjct: 116 DQCT---WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGV 172
Query: 377 SYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVK--------------------------- 409
+S+ + + +VD+ S+ G V
Sbjct: 173 Q-VHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQN 231
Query: 410 ----EALDFVRTM---PVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYV 462
EALD + M VEP+++ S+I+AC + +K+G+ + +++N+ N +
Sbjct: 232 GPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLR--NDI 289
Query: 463 LLSN----IYAKLRRWEQKTKVREMMDMRGMKKVPGSTMI 498
+LSN +YAK R ++ + + M +R + + ++MI
Sbjct: 290 ILSNAFVDMYAKCSRIKEARFIFDSMPIRNV--IAETSMI 327
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 288 bits (736), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 165/453 (36%), Positives = 252/453 (55%), Gaps = 27/453 (5%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D FN +I +A S + L+LY M+ G+ P+++T +L C LSD+RLGK V
Sbjct: 196 DVSSFNVMIVGYAKQGFSLEA-LKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGV 254
Query: 166 HGSVVKFG--FDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXX----------------- 206
HG + + G + +L + N ++ MY
Sbjct: 255 HGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLG 314
Query: 207 ---LAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAV-GLFREMQVM-GVCPDEITMVSV 261
A VFD+ PK D V+W++++ GY+++G R V LF EM ++ V PD +TMVS+
Sbjct: 315 DMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSL 374
Query: 262 LTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTI 321
++ A+ G L G+W+ + ++ L +ALIDM+ KCG +++A +F+ +
Sbjct: 375 ISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDV 434
Query: 322 VSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNS 381
WTS+I GLA HG G +A+ LF M E+GV P++V+ + VL+AC HS LV++G FN
Sbjct: 435 ALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNH 494
Query: 382 MEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFV-RTMPVEPNQIIWRSIITACHARGEL 440
M+ FG P+ EHYG +VDLL RAG V+EA D V + MP+ P+Q +W SI++AC ++
Sbjct: 495 MKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDI 554
Query: 441 KLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIEL 500
+ E ELL+ EP E YVLLSNIYA + RW K RE M+ RG+KK G + +
Sbjct: 555 ETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVG 614
Query: 501 NNEMCEFVAGDK-SHDQYKQIYEMVDEMGREIK 532
+ FVA +K +H ++ +I ++ + E+K
Sbjct: 615 VEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMK 647
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 182/382 (47%), Gaps = 71/382 (18%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
+ F++NT+I A + SK+ LY +M+R+ V P++ T+ +++KA + LS++ K +
Sbjct: 99 NVFVYNTMISAVS---SSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEV---KQI 152
Query: 166 HGSVVKFG-FDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWS 224
H ++ G ++ N+++ Y +A KVF P D +++
Sbjct: 153 HCHIIVSGCLSLGNYLWNSLVKFYMELGNFG-----------VAEKVFARMPHPDVSSFN 201
Query: 225 AMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWK 284
MI GYA++G S A+ L+ +M G+ PDE T++S+L C L + LGK + +IE +
Sbjct: 202 VMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIE-R 260
Query: 285 KIP---KSVELCNALIDMFAKC-------------------------------GDVDKAM 310
+ P ++ L NAL+DM+ KC GD++ A
Sbjct: 261 RGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQ 320
Query: 311 NLFRQMDSCTIVSWTSVIVGLAMHGRGSEAV-SLFDEM-VEQGVEPDDVSFIGVLSACCH 368
+F QM +VSW S++ G + G V LF EM + + V+PD V+ + ++S +
Sbjct: 321 AVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAAN 380
Query: 369 SKLVDKGRSYFNSMEGNFGIVPKIEHYG------CMVDLLSRAGFVKEALDFVRTMPVEP 422
+ + GR G+V +++ G ++D+ + G ++ A +T E
Sbjct: 381 NGELSHGRWV-------HGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKT-ATEK 432
Query: 423 NQIIWRSIIT--ACHARGELKL 442
+ +W S+IT A H G+ L
Sbjct: 433 DVALWTSMITGLAFHGNGQQAL 454
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 158/447 (35%), Positives = 246/447 (55%), Gaps = 23/447 (5%)
Query: 101 RASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTML--RYGVVPNKFTYPFVLKACAGLSD 158
R + + F++NT+IR F+ + + + + ++ ML V P + TYP V KA L
Sbjct: 83 RINHKNPFVWNTIIRGFSRSSFPEMA-ISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQ 141
Query: 159 LRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXL----------- 207
R G+ +HG V+K G +DD ++NTM+HMY
Sbjct: 142 ARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMG 201
Query: 208 ---------AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITM 258
A +FDE P+ + V+W++MI G+ R G A+ +FREMQ V PD TM
Sbjct: 202 FAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTM 261
Query: 259 VSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDS 318
VS+L ACA LGA E G+W+ YI + + + ALIDM+ KCG +++ +N+F
Sbjct: 262 VSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPK 321
Query: 319 CTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSY 378
+ W S+I+GLA +G A+ LF E+ G+EPD VSFIGVL+AC HS V + +
Sbjct: 322 KQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEF 381
Query: 379 FNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARG 438
F M+ + I P I+HY MV++L AG ++EA ++ MPVE + +IW S+++AC G
Sbjct: 382 FRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIG 441
Query: 439 ELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMI 498
+++ + +K L + +P YVLLSN YA +E+ + R +M R M+K G + I
Sbjct: 442 NVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSI 501
Query: 499 ELNNEMCEFVAGDKSHDQYKQIYEMVD 525
E++ E+ EF++ +H + +IY ++D
Sbjct: 502 EVDFEVHEFISCGGTHPKSAEIYSLLD 528
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 159/465 (34%), Positives = 259/465 (55%), Gaps = 30/465 (6%)
Query: 70 VLTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQ 129
+LT F + HYA+S D P ++F+++T+IR + + Q GL+
Sbjct: 49 LLTAFLHLPNLNKHFHYASSIF---DSIEIP-----NSFVYDTMIRICSRSSQPHL-GLR 99
Query: 130 LYRTMLRY---GVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFG-FDDDLHVQNTMI 185
+ M++ + P+ T+ F++ AC +GK +H VVK G F D HVQ ++
Sbjct: 100 YFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVL 159
Query: 186 HMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFRE 245
+Y A KVFDE P+ D V W ++ GY R G S + +F+E
Sbjct: 160 RIYVEDKLLFD-----------ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKE 208
Query: 246 MQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK-IPKSVELCNALIDMFAKCG 304
M V G+ PDE ++ + LTACA +GAL GKW+ +++ K+ I V + AL+DM+AKCG
Sbjct: 209 MLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCG 268
Query: 305 DVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMV-EQGVEPDDVSFIGVL 363
++ A+ +F ++ + SW ++I G A +G +A + D + E G++PD V +GVL
Sbjct: 269 CIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVL 328
Query: 364 SACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPN 423
+AC H +++GR+ +ME +GI PK EHY C+VDL+ RAG + +ALD + MP++P
Sbjct: 329 AACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPL 388
Query: 424 QIIWRSIITACHARGELKLGESISKELLR----NEPTHESNYVLLSNIYAKLRRWEQKTK 479
+W +++ C ++LGE + LL N E+ V LSNIY ++R + K
Sbjct: 389 ASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFK 448
Query: 480 VREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMV 524
VR M++ RG++K PG +++E++ + +FV+GD SH QI+ ++
Sbjct: 449 VRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLI 493
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 175/499 (35%), Positives = 269/499 (53%), Gaps = 68/499 (13%)
Query: 63 GLINNPLVLTK--FAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHT 120
GL++N V+ + ++A+ S A+ YA LF + P D + N ++R A +
Sbjct: 39 GLMSNLSVVGELIYSASLSVPGALKYAHK-LFDEIPKP-------DVSICNHVLRGSAQS 90
Query: 121 PQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHV 180
+ + + + LY M + GV P+++T+ FVLKAC+ L G A HG VV+ GF + +V
Sbjct: 91 MKPEKT-VSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYV 149
Query: 181 QNTMI--------------------HMYXXXXXXXXXXXXXXXXXXLAGKVFDESP---- 216
+N +I + A ++FDE P
Sbjct: 150 KNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQ 209
Query: 217 ---------------------------KTDSVTWSAMIGGYARRGHSSRAVGLFREMQVM 249
+ D VTW+AMI GY G+ A+G+F+EM+
Sbjct: 210 VAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDA 269
Query: 250 GVCPDEITMVSVLTACADLGALELGKWLESYI-EWKKIPKSV----ELCNALIDMFAKCG 304
G PD +T++S+L+ACA LG LE GK L YI E + S+ + NALIDM+AKCG
Sbjct: 270 GEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCG 329
Query: 305 DVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLS 364
+D+A+ +FR + + +W ++IVGLA+H ++ +F+EM V P++V+FIGV+
Sbjct: 330 SIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVIL 388
Query: 365 ACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQ 424
AC HS VD+GR YF+ M + I P I+HYGCMVD+L RAG ++EA FV +M +EPN
Sbjct: 389 ACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNA 448
Query: 425 IIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMM 484
I+WR+++ AC G ++LG+ +++LL +YVLLSNIYA +W+ KVR+M
Sbjct: 449 IVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMF 508
Query: 485 DMRGMKKVPGSTMIELNNE 503
D +KK G ++IE +++
Sbjct: 509 DDTRVKKPTGVSLIEEDDD 527
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 158/381 (41%), Gaps = 40/381 (10%)
Query: 158 DLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPK 217
++R K +H S+V G +L V +I+ A K+FDE PK
Sbjct: 24 NIRTLKQIHASMVVNGLMSNLSVVGELIY---------SASLSVPGALKYAHKLFDEIPK 74
Query: 218 TDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWL 277
D + ++ G A+ + V L+ EM+ GV PD T VL AC+ L G
Sbjct: 75 PDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAF 134
Query: 278 ESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRG 337
+ + + NALI A CGD+ A LF V+W+S+ G A G+
Sbjct: 135 HGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKI 194
Query: 338 SEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGC 397
EA+ LFDEM + D V++ +++ C K +D R F+ + +
Sbjct: 195 DEAMRLFDEMPYK----DQVAWNVMITGCLKCKEMDSARELFDRFTEK-----DVVTWNA 245
Query: 398 MVDLLSRAGFVKEALDFVRTM---PVEPNQIIWRSIITACHARGELKLGESISKELLRNE 454
M+ G+ KEAL + M P+ + S+++AC G+L+ G+ + +L
Sbjct: 246 MISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETA 305
Query: 455 PTHESNYV------LLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFV 508
S YV L ++YAK ++ +V RG+K ST L +
Sbjct: 306 SVSSSIYVGTPIWNALIDMYAKCGSIDRAIEV-----FRGVKDRDLSTWNTL-------I 353
Query: 509 AGDKSHDQYKQIYEMVDEMGR 529
G H I EM +EM R
Sbjct: 354 VGLALHHAEGSI-EMFEEMQR 373
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 285 bits (729), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 159/465 (34%), Positives = 260/465 (55%), Gaps = 30/465 (6%)
Query: 70 VLTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQ 129
+LT F + HYA+S D P ++F+++T+IR + + Q GL+
Sbjct: 49 LLTAFLHLPNLNKHFHYASSIF---DSIEIP-----NSFVYDTMIRICSRSSQPHL-GLR 99
Query: 130 LYRTMLRY---GVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFG-FDDDLHVQNTMI 185
+ M++ + P+ T+ F++ AC +GK +H VVK G F D HVQ ++
Sbjct: 100 YFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVL 159
Query: 186 HMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFRE 245
+Y A KVFDE P+ D V W ++ GY R G S + +FRE
Sbjct: 160 RIYVEDKLLLD-----------ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFRE 208
Query: 246 MQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK-IPKSVELCNALIDMFAKCG 304
M V G+ PDE ++ + LTACA +GAL GKW+ +++ K I V + AL+DM+AKCG
Sbjct: 209 MLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCG 268
Query: 305 DVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMV-EQGVEPDDVSFIGVL 363
++ A+ +F+++ + SW ++I G A +G +A++ + + E G++PD V +GVL
Sbjct: 269 CIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVL 328
Query: 364 SACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPN 423
+AC H +++GRS +ME + I PK EHY C+VDL+ RAG + +AL+ + MP++P
Sbjct: 329 AACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPL 388
Query: 424 QIIWRSIITACHARGELKLGESISKELLR----NEPTHESNYVLLSNIYAKLRRWEQKTK 479
+W +++ C ++LGE K LL N E+ V LSNIY ++R + +K
Sbjct: 389 ASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASK 448
Query: 480 VREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMV 524
VR M++ RG++K PG +++E++ + +FV+GD SH QI+ ++
Sbjct: 449 VRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVI 493
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 282 bits (721), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 150/437 (34%), Positives = 247/437 (56%), Gaps = 12/437 (2%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
DA +N +I A + + L L+ +MLR + P++FT+ +LKAC G S L G +
Sbjct: 447 DAVSWNAIIAAHEQNGKGYET-LFLFVSMLRSRIEPDEFTFGSILKACTGGS-LGYGMEI 504
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAG---------KVFDESP 216
H S+VK G + V ++I MY A K+ ++
Sbjct: 505 HSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRL 564
Query: 217 KTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKW 276
+ V+W+++I GY + S A LF M MG+ PD+ T +VL CA+L + LGK
Sbjct: 565 QEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQ 624
Query: 277 LESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGR 336
+ + + K++ V +C+ L+DM++KCGD+ + +F + V+W ++I G A HG+
Sbjct: 625 IHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGK 684
Query: 337 GSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYG 396
G EA+ LF+ M+ + ++P+ V+FI +L AC H L+DKG YF M+ ++G+ P++ HY
Sbjct: 685 GEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYS 744
Query: 397 CMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHA-RGELKLGESISKELLRNEP 455
MVD+L ++G VK AL+ +R MP E + +IWR+++ C R +++ E + LLR +P
Sbjct: 745 NMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDP 804
Query: 456 THESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHD 515
S Y LLSN+YA WE+ + +R M +KK PG + +EL +E+ F+ GDK+H
Sbjct: 805 QDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHP 864
Query: 516 QYKQIYEMVDEMGREIK 532
++++IYE + + E+K
Sbjct: 865 RWEEIYEELGLIYSEMK 881
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 144/300 (48%), Gaps = 39/300 (13%)
Query: 125 SSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTM 184
S L+ ++ M + ++ Y VL++CA LS+LRLG +H +K F D V+
Sbjct: 263 SLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTAT 322
Query: 185 IHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFR 244
+ MY A +FD S + +++AMI GY++ H +A+ LF
Sbjct: 323 LDMYAKCDNMQD-----------AQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFH 371
Query: 245 EMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELC--NALIDMFAK 302
+ G+ DEI++ V ACA + L G L+ Y K S+++C NA IDM+ K
Sbjct: 372 RLMSSGLGFDEISLSGVFRACALVKGLSEG--LQIYGLAIKSSLSLDVCVANAAIDMYGK 429
Query: 303 CGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGV 362
C + +A +F +M VSW ++I +G+G E + LF M+ +EPD+ +F +
Sbjct: 430 CQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSI 489
Query: 363 LSACC----------HSKLVDKGRSYFNSMEGNFGIVPKIEHYGC-MVDLLSRAGFVKEA 411
L AC HS +V G + +S+ GC ++D+ S+ G ++EA
Sbjct: 490 LKACTGGSLGYGMEIHSSIVKSGMASNSSV-------------GCSLIDMYSKCGMIEEA 536
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 151/338 (44%), Gaps = 22/338 (6%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +N+++ + +S S ++++ M R G+ + T+ +LK C+ L D LG +
Sbjct: 144 DVVSWNSMLSGYLQNGESLKS-IEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQI 202
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
HG VV+ G D D+ + ++ MY +VF P+ +SV+WSA
Sbjct: 203 HGIVVRVGCDTDVVAASALLDMYAKGKRFVESL-----------RVFQGIPEKNSVSWSA 251
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
+I G + S A+ F+EMQ + + SVL +CA L L LG L ++
Sbjct: 252 IIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD 311
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
+ A +DM+AKC ++ A LF ++ S+ ++I G + G +A+ LF
Sbjct: 312 FAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFH 371
Query: 346 EMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCM----VDL 401
++ G+ D++S GV AC K + +G + I + C+ +D+
Sbjct: 372 RLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY-----GLAIKSSLSLDVCVANAAIDM 426
Query: 402 LSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGE 439
+ + EA M + + W +II A G+
Sbjct: 427 YGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQNGK 463
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 111/269 (41%), Gaps = 24/269 (8%)
Query: 145 TYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXX----- 199
+ FV K CA L LGK H ++ GF V N ++ +Y
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 200 ---------------XXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFR 244
A F+ P D V+W++M+ GY + G S +++ +F
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 245 EMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCG 304
+M G+ D T +L C+ L LG + + V +AL+DM+AK
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 229
Query: 305 DVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLS 364
+++ +F+ + VSW+++I G + S A+ F EM + + VL
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 289
Query: 365 ACCH-SKLVDKGRSYFNSMEGNF---GIV 389
+C S+L G+ + ++++ +F GIV
Sbjct: 290 SCAALSELRLGGQLHAHALKSDFAADGIV 318
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 57/253 (22%)
Query: 261 VLTACADLGALELGK------------------------------WLESYIEWKKIP-KS 289
V CA GALELGK ++ + + + K+P +
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 290 VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVE 349
V N +I+ ++K D+ KA + F M +VSW S++ G +G +++ +F +M
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173
Query: 350 QGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVK 409
+G+E D +F +L C + G GIV ++ GC D+++ + +
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLGMQI-------HGIVVRV---GCDTDVVAASALLD 223
Query: 410 ---------EALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESN 460
E+L + +P E N + W +II C L L KE+ + N
Sbjct: 224 MYAKGKRFVESLRVFQGIP-EKNSVSWSAIIAGCVQNNLLSLALKFFKEM------QKVN 276
Query: 461 YVLLSNIYAKLRR 473
+ +IYA + R
Sbjct: 277 AGVSQSIYASVLR 289
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/460 (35%), Positives = 251/460 (54%), Gaps = 46/460 (10%)
Query: 107 AFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVH 166
FL+N LI+A+ Q S + LY + G+ P+ T+ F+ A A S R + +H
Sbjct: 47 TFLYNKLIQAYYVHHQPHES-IVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLH 105
Query: 167 GSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAM 226
+ GF+ D T+I Y A +VFDE K D W+AM
Sbjct: 106 SQFFRSGFESDSFCCTTLITAYAKLGALC-----------CARRVFDEMSKRDVPVWNAM 154
Query: 227 IGGYARRGHSSRAVGLFREMQ------------------------VMGVC--------PD 254
I GY RRG A+ LF M M +C P+
Sbjct: 155 ITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPN 214
Query: 255 EITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFR 314
IT+VSVL ACA+LG LE+G+ LE Y ++ +CNA I+M++KCG +D A LF
Sbjct: 215 HITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFE 274
Query: 315 QM-DSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVD 373
++ + + SW S+I LA HG+ EA++LF +M+ +G +PD V+F+G+L AC H +V
Sbjct: 275 ELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVV 334
Query: 374 KGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITA 433
KG+ F SME I PK+EHYGCM+DLL R G ++EA D ++TMP++P+ ++W +++ A
Sbjct: 335 KGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGA 394
Query: 434 CHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVP 493
C G +++ E S+ L + EPT+ N V++SNIYA +W+ ++R++M M K
Sbjct: 395 CSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAA 454
Query: 494 G-STMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIK 532
G S +E+ ++ +F DKSH + +IY++++E+ R +K
Sbjct: 455 GYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMK 494
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 155/438 (35%), Positives = 241/438 (55%), Gaps = 21/438 (4%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +N++I ++ +K + + L+R M G P++ T +L AC+ L DLR G+ +
Sbjct: 197 DTVSWNSMISGYSEAGYAKDA-MDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLL 255
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
+ + + +I MY A +VF++ K D V W+A
Sbjct: 256 EEMAITKKIGLSTFLGSKLISMYGKCGDLDS-----------ARRVFNQMIKKDRVAWTA 304
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
MI Y++ G SS A LF EM+ GV PD T+ +VL+AC +GALELGK +E++
Sbjct: 305 MITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELS 364
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
+ ++ + L+DM+ KCG V++A+ +F M +W ++I A G EA+ LFD
Sbjct: 365 LQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFD 424
Query: 346 EMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRA 405
M V P D++FIGVLSAC H+ LV +G YF+ M FG+VPKIEHY ++DLLSRA
Sbjct: 425 RM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRA 481
Query: 406 GFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLR-NEPTHESNYVLL 464
G + EA +F+ P +P++I+ +I+ ACH R ++ + E + L+ E + NYV+
Sbjct: 482 GMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVIS 541
Query: 465 SNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDK-----SHDQYKQ 519
SN+ A ++ W++ K+R +M RG+ K PG + IE+ E+ EF+AG D
Sbjct: 542 SNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSL 601
Query: 520 IYEMVDEMGREIKRAGYV 537
+V+EM RE GY+
Sbjct: 602 FDLLVEEMKRERYEFGYI 619
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 136/377 (36%), Positives = 199/377 (52%), Gaps = 24/377 (6%)
Query: 65 INNPLVLTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSK 124
+ P L A FN +SFLFS T P + + FN +IR +T
Sbjct: 65 VEKPNFLIPKAVELGDFNY----SSFLFS--VTEEP-----NHYSFNYMIRGLTNTWNDH 113
Query: 125 SSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTM 184
+ L LYR M G+ P+KFTY FV ACA L ++ +G++VH S+ K G + D+H+ +++
Sbjct: 114 EAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSL 173
Query: 185 IHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFR 244
I MY A K+FDE + D+V+W++MI GY+ G++ A+ LFR
Sbjct: 174 IMMYAKCGQVG-----------YARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFR 222
Query: 245 EMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCG 304
+M+ G PDE T+VS+L AC+ LG L G+ LE KKI S L + LI M+ KCG
Sbjct: 223 KMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCG 282
Query: 305 DVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLS 364
D+D A +F QM V+WT++I + +G+ SEA LF EM + GV PD + VLS
Sbjct: 283 DLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLS 342
Query: 365 ACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQ 424
AC ++ G+ + + I +VD+ + G V+EAL MPV+ N+
Sbjct: 343 ACGSVGALELGKQ-IETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVK-NE 400
Query: 425 IIWRSIITACHARGELK 441
W ++ITA +G K
Sbjct: 401 ATWNAMITAYAHQGHAK 417
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 239/429 (55%), Gaps = 14/429 (3%)
Query: 106 DAFLFNTLIRAFAH--TPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGK 163
D LFN +I ++ T L ++R M + P+ T+ +L+A A L+ L L K
Sbjct: 415 DVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSK 474
Query: 164 AVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTW 223
+HG + K+G + D+ + +I +Y VFDE D V W
Sbjct: 475 QIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRL-----------VFDEMKVKDLVIW 523
Query: 224 SAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEW 283
++M GY ++ + A+ LF E+Q+ PDE T +++TA +L +++LG+ +
Sbjct: 524 NSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLK 583
Query: 284 KKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSL 343
+ + + + NAL+DM+AKCG + A F S +V W SVI A HG G +A+ +
Sbjct: 584 RGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQM 643
Query: 344 FDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLS 403
++M+ +G+EP+ ++F+GVLSAC H+ LV+ G F M FGI P+ EHY CMV LL
Sbjct: 644 LEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLG 702
Query: 404 RAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVL 463
RAG + +A + + MP +P I+WRS+++ C G ++L E ++ + ++P ++ +
Sbjct: 703 RAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTM 762
Query: 464 LSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEM 523
LSNIYA W + KVRE M + G+ K PG + I +N E+ F++ DKSH + QIYE+
Sbjct: 763 LSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEV 822
Query: 524 VDEMGREIK 532
+D++ +I+
Sbjct: 823 LDDLLVQIR 831
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 115/229 (50%), Gaps = 15/229 (6%)
Query: 141 PNKFTYPFVLKACAGLSDLR---LGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXX 197
PN++ ++AC+GL D R + + +VK GFD D++V +I Y
Sbjct: 144 PNEYILSSFIQACSGL-DGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDY- 201
Query: 198 XXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEIT 257
A VFD P+ +VTW+ MI G + G S ++ LF ++ V PD
Sbjct: 202 ----------ARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYI 251
Query: 258 MVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD 317
+ +VL+AC+ L LE GK + ++I + L N LID + KCG V A LF M
Sbjct: 252 LSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP 311
Query: 318 SCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSAC 366
+ I+SWT+++ G + EA+ LF M + G++PD + +L++C
Sbjct: 312 NKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSC 360
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 153/334 (45%), Gaps = 20/334 (5%)
Query: 128 LQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHM 187
LQL+ ++ VVP+ + VL AC+ L L GK +H ++++G + D + N +I
Sbjct: 234 LQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDS 293
Query: 188 YXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQ 247
Y A K+F+ P + ++W+ ++ GY + A+ LF M
Sbjct: 294 YVKCGRVIA-----------AHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMS 342
Query: 248 VMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVD 307
G+ PD S+LT+CA L AL G + +Y + + N+LIDM+AKC +
Sbjct: 343 KFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLT 402
Query: 308 KAMNLFRQMDSCTIVSWTSVIVGLAMHGRG---SEAVSLFDEMVEQGVEPDDVSFIGVLS 364
A +F + +V + ++I G + G EA+++F +M + + P ++F+ +L
Sbjct: 403 DARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLR 462
Query: 365 ACCHSKLVDKGRS-YFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPN 423
A + L G S + + +G+ I ++D+ S +K++ M V+ +
Sbjct: 463 A--SASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-D 519
Query: 424 QIIWRSIITAC--HARGELKLGESISKELLRNEP 455
+IW S+ + E L + +L R P
Sbjct: 520 LVIWNSMFAGYVQQSENEEALNLFLELQLSRERP 553
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 20/280 (7%)
Query: 159 LRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKT 218
L VHG ++ +G + D ++ N +I++Y A KVF++ P+
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVY-----------ARKVFEKMPER 108
Query: 219 DSVTWSAMIGGYARRGHSSRAVGLFREM-QVMGVCPDEITMVSVLTACADLGALELGKW- 276
+ V+WS M+ G ++ +F E + P+E + S + AC+ L G+W
Sbjct: 109 NLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGR--GRWM 166
Query: 277 ---LESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAM 333
L+S++ + V + LID + K G++D A +F + + V+WT++I G
Sbjct: 167 VFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 334 HGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIE 393
GR ++ LF +++E V PD VLSAC ++ G+ ++ +G+
Sbjct: 227 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQ-IHAHILRYGLEMDAS 285
Query: 394 HYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITA 433
++D + G V A MP N I W ++++
Sbjct: 286 LMNVLIDSYVKCGRVIAAHKLFNGMP-NKNIISWTTLLSG 324
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 141/390 (36%), Positives = 230/390 (58%), Gaps = 14/390 (3%)
Query: 107 AFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVH 166
AFL+N ++R++ +S +Q+Y M+R V+P++++ P V+KA + D LGK +H
Sbjct: 82 AFLWNNIMRSYIRH-ESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELH 140
Query: 167 GSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAM 226
V+ GF D ++ I +Y A KVFDE+P+ +W+A+
Sbjct: 141 SVAVRLGFVGDEFCESGFITLYCKAGEFEN-----------ARKVFDENPERKLGSWNAI 189
Query: 227 IGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKI 286
IGG G ++ AV +F +M+ G+ PD+ TMVSV +C LG L L L + K
Sbjct: 190 IGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKT 249
Query: 287 PKS--VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLF 344
+ + + N+LIDM+ KCG +D A ++F +M +VSW+S+IVG A +G EA+ F
Sbjct: 250 EEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECF 309
Query: 345 DEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSR 404
+M E GV P+ ++F+GVLSAC H LV++G++YF M+ F + P + HYGC+VDLLSR
Sbjct: 310 RQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSR 369
Query: 405 AGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLL 464
G +KEA V MP++PN ++W ++ C G++++ E ++ ++ EP ++ YV+L
Sbjct: 370 DGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVL 429
Query: 465 SNIYAKLRRWEQKTKVREMMDMRGMKKVPG 494
+N+YA W+ +VR++M + + K+P
Sbjct: 430 ANVYALRGMWKDVERVRKLMKTKKVAKIPA 459
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 155/439 (35%), Positives = 236/439 (53%), Gaps = 15/439 (3%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+ TLI F H GL++Y+ ML + ++A A + + GK +H SV
Sbjct: 181 WTTLITGFTHLGDG-IGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASV 239
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
+K GF +L V N+++ +Y A F E D +TW+ +I
Sbjct: 240 IKRGFQSNLPVMNSILDLYCRCGYLSE-----------AKHYFHEMEDKDLITWNTLISE 288
Query: 230 YARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKS 289
R SS A+ +F+ + G P+ T S++ ACA++ AL G+ L I + K+
Sbjct: 289 L-ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKN 347
Query: 290 VELCNALIDMFAKCGDVDKAMNLFRQM-DSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMV 348
VEL NALIDM+AKCG++ + +F ++ D +VSWTS+++G HG G+EAV LFD+MV
Sbjct: 348 VELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMV 407
Query: 349 EQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFV 408
G+ PD + F+ VLSAC H+ LV+KG YFN ME +GI P + Y C+VDLL RAG +
Sbjct: 408 SSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKI 467
Query: 409 KEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESI-SKELLRNEPTHESNYVLLSNI 467
EA + V MP +P++ W +I+ AC A L + +++++ +P YV+LS I
Sbjct: 468 GEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYI 527
Query: 468 YAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEM 527
YA +W +VR+MM M G KK G + I + N++ F DK +Y ++ +
Sbjct: 528 YAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLL 587
Query: 528 GREIKRAGYVPTTSQVLLD 546
E + AGYVP ++ D
Sbjct: 588 IEETREAGYVPELDSLVND 606
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 156/335 (46%), Gaps = 17/335 (5%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D + +I +A + + + + M++ G PN+FT VLK+C + L G V
Sbjct: 75 DVVAWTAMITGYA-SSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALV 133
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
HG VVK G + L+V N M++MY A +F + + VTW+
Sbjct: 134 HGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA----------ACLIFRDIKVKNDVTWTT 183
Query: 226 MIGGYARRGHSSRAVGLFREMQVMG--VCPDEITMVSVLTACADLGALELGKWLESYIEW 283
+I G+ G + ++++M + V P IT+ + A A + ++ GK + + +
Sbjct: 184 LITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI--AVRASASIDSVTTGKQIHASVIK 241
Query: 284 KKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSL 343
+ ++ + N+++D++ +CG + +A + F +M+ +++W ++I L SEA+ +
Sbjct: 242 RGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELE-RSDSSEALLM 300
Query: 344 FDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLS 403
F QG P+ +F +++AC + ++ G+ + G +E ++D+ +
Sbjct: 301 FQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR-GFNKNVELANALIDMYA 359
Query: 404 RAGFVKEALDFVRTMPVEPNQIIWRSIITACHARG 438
+ G + ++ + N + W S++ + G
Sbjct: 360 KCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHG 394
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 108/226 (47%), Gaps = 3/226 (1%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A +FDE P D V W+AMI GYA +++RA F EM G P+E T+ SVL +C +
Sbjct: 64 ARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRN 123
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCG-DVDKAMNLFRQMDSCTIVSWTS 326
+ L G + + + S+ + NA+++M+A C ++ A +FR + V+WT+
Sbjct: 124 MKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTT 183
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNF 386
+I G G G + ++ +M+ + E + A V G+ S+
Sbjct: 184 LITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKR- 242
Query: 387 GIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIIT 432
G + ++DL R G++ EA + M + + I W ++I+
Sbjct: 243 GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME-DKDLITWNTLIS 287
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 4/173 (2%)
Query: 280 YIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSE 339
Y +K + N ++ F K G V++A +LF +M +V+WT++I G A +
Sbjct: 36 YPPYKPKKHHILATNLIVSYFEK-GLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNAR 94
Query: 340 AVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMV 399
A F EMV+QG P++ + VL +C + K++ G + + + G+ + M+
Sbjct: 95 AWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYG-ALVHGVVVKLGMEGSLYVDNAMM 153
Query: 400 DLLSRAGFVKEALDFV-RTMPVEPNQIIWRSIITACHARGELKLGESISKELL 451
++ + EA + R + V+ N + W ++IT G+ G + K++L
Sbjct: 154 NMYATCSVTMEAACLIFRDIKVK-NDVTWTTLITGFTHLGDGIGGLKMYKQML 205
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 152/397 (38%), Positives = 225/397 (56%), Gaps = 18/397 (4%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D + +I F T K + T + V PN TY VL + + L LGK +
Sbjct: 171 DVVSWTGIITGFTRTGLYKEA----LDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGI 226
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
HG ++K L N +I MY A +VF E K D V+W++
Sbjct: 227 HGLILKRASLISLETGNALIDMYVKCEQLSD-----------AMRVFGELEKKDKVSWNS 275
Query: 226 MIGGYARRGHSSRAVGLFREMQVM-GVCPDEITMVSVLTACADLGALELGKWLESYIEWK 284
MI G S A+ LF MQ G+ PD + SVL+ACA LGA++ G+W+ YI
Sbjct: 276 MISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTA 335
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLF 344
I + A++DM+AKCG ++ A+ +F + S + +W +++ GLA+HG G E++ F
Sbjct: 336 GIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYF 395
Query: 345 DEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEG-NFGIVPKIEHYGCMVDLLS 403
+EMV+ G +P+ V+F+ L+ACCH+ LVD+GR YF+ M+ + + PK+EHYGCM+DLL
Sbjct: 396 EEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLC 455
Query: 404 RAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGEL-KLGESISKELLRNEPTHESNYV 462
RAG + EAL+ V+ MPV+P+ I +I++AC RG L +L + I L E YV
Sbjct: 456 RAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYV 515
Query: 463 LLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIE 499
LLSNI+A RRW+ ++R +M ++G+ KVPGS+ IE
Sbjct: 516 LLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/339 (33%), Positives = 168/339 (49%), Gaps = 20/339 (5%)
Query: 103 SSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLG 162
S +F +NTL+ ++A + + + + Y+T + G P+ FT+P V KAC S +R G
Sbjct: 67 SVLSSFSYNTLLSSYAVCDKPRVT-IFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREG 125
Query: 163 KAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVT 222
K +HG V K GF DD++VQN+++H Y A KVF E P D V+
Sbjct: 126 KQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRN-----------ACKVFGEMPVRDVVS 174
Query: 223 WSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIE 282
W+ +I G+ R G A+ F +M V P+ T V VL + +G L LGK + I
Sbjct: 175 WTGIITGFTRTGLYKEALDTFSKMDVE---PNLATYVCVLVSSGRVGCLSLGKGIHGLIL 231
Query: 283 WKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVS 342
+ S+E NALIDM+ KC + AM +F +++ VSW S+I GL R EA+
Sbjct: 232 KRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAID 291
Query: 343 LFDEM-VEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDL 401
LF M G++PD VLSAC VD GR + + GI +VD+
Sbjct: 292 LFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGR-WVHEYILTAGIKWDTHIGTAIVDM 350
Query: 402 LSRAGFVKEALDFVRTMPVEPNQIIWRSII--TACHARG 438
++ G+++ AL+ + N W +++ A H G
Sbjct: 351 YAKCGYIETALEIFNGIR-SKNVFTWNALLGGLAIHGHG 388
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 158/473 (33%), Positives = 240/473 (50%), Gaps = 49/473 (10%)
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLS--DLRLGKAVHGSVVKFGFDDDLHVQNTM 184
L ++ M + + FT P +L C LS ++++ + H +VK G+ V N +
Sbjct: 312 ALSMFGRMHERDMKIDDFTIPSILN-CFALSRTEMKIASSAHCLIVKTGYATYKLVNNAL 370
Query: 185 IHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFR 244
+ MY A KVF+ + D ++W+A++ G G A+ LF
Sbjct: 371 VDMYAKRGIMDS-----------ALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFC 419
Query: 245 EMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCG 304
M+V G+ PD+I SVL+A A+L LE G+ + P S+ + N+L+ M+ KCG
Sbjct: 420 NMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCG 479
Query: 305 DVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLS 364
++ A +F M+ +++WT +IVG A +G
Sbjct: 480 SLEDANVIFNSMEIRDLITWTCLIVGYAKNG----------------------------- 510
Query: 365 ACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQ 424
L++ + YF+SM +GI P EHY CM+DL R+G + + M VEP+
Sbjct: 511 ------LLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDA 564
Query: 425 IIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMM 484
+W++I+ A G ++ GE +K L+ EP + YV LSN+Y+ R ++ VR +M
Sbjct: 565 TVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLM 624
Query: 485 DMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVL 544
R + K PG + +E ++ F++ D+ H + +IY VDEM IK AGY S L
Sbjct: 625 KSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFAL 684
Query: 545 LDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFI 597
D+D+E KE L HSEKLA+AF LL P G PIRI+KNLRVC DCHSA K +
Sbjct: 685 HDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAMKLL 737
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 169/351 (48%), Gaps = 14/351 (3%)
Query: 84 IHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNK 143
+ Y+ S SD + +N LI + + SK L+ M G+ PN+
Sbjct: 67 VAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSG-SKVEAFNLFWEMQSDGIKPNE 125
Query: 144 FTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXX 203
+T VL+ C L L G+ +HG +K GFD D++V N ++ MY
Sbjct: 126 YTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISE------- 178
Query: 204 XXXLAGKVFDE-SPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVL 262
A +F+ + ++VTW++M+ GY++ G + +A+ FR+++ G ++ T SVL
Sbjct: 179 ----AEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVL 234
Query: 263 TACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIV 322
TACA + A +G + I ++ + +ALIDM+AKC +++ A L M+ +V
Sbjct: 235 TACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVV 294
Query: 323 SWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM 382
SW S+IVG G EA+S+F M E+ ++ DD + +L+ S+ K S + +
Sbjct: 295 SWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCL 354
Query: 383 EGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITA 433
G +VD+ ++ G + AL M +E + I W +++T
Sbjct: 355 IVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTG 404
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 120/241 (49%), Gaps = 5/241 (2%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A K+F +P ++++W+A+I GY + G A LF EMQ G+ P+E T+ SVL C
Sbjct: 78 AEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTS 137
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDS-CTIVSWTS 326
L L G+ + + V + N L+ M+A+C + +A LF M+ V+WTS
Sbjct: 138 LVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTS 197
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNF 386
++ G + +G +A+ F ++ +G + + +F VL+AC G + +
Sbjct: 198 MLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS- 256
Query: 387 GIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESI 446
G I ++D+ ++ ++ A + M V+ + + W S+I C +G +GE++
Sbjct: 257 GFKTNIYVQSALIDMYAKCREMESARALLEGMEVD-DVVSWNSMIVGCVRQG--LIGEAL 313
Query: 447 S 447
S
Sbjct: 314 S 314
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 86/232 (37%), Gaps = 49/232 (21%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D + L+ H S L+L+ M G+ P+K VL A A L+ L G+ V
Sbjct: 394 DVISWTALVTGNTHNG-SYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQV 452
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
HG+ +K GF L V N+++ MY A +F+ D +TW+
Sbjct: 453 HGNYIKSGFPSSLSVNNSLVTMYTKCGSLED-----------ANVIFNSMEIRDLITWTC 501
Query: 226 MIGGYARRGHSSRAVGLFREMQ-VMGVCPDEITMVSVLTACADLGALELGKWLESYIEWK 284
+I GYA+ G A F M+ V G+ P E Y
Sbjct: 502 LIVGYAKNGLLEDAQRYFDSMRTVYGITPGP----------------------EHYA--- 536
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD-SCTIVSWTSVIVGLAMHG 335
+ID+F + GD K L QM+ W +++ HG
Sbjct: 537 ----------CMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHG 578
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Query: 274 GKWLESYIEWKKIPKSVELC-NALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLA 332
G+ E+ + K+P+ E N +I ++ + A LFR +SW ++I G
Sbjct: 42 GRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYC 101
Query: 333 MHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRS-YFNSMEGNFGIVPK 391
G EA +LF EM G++P++ + VL C L+ +G + ++++ F +
Sbjct: 102 KSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDL--D 159
Query: 392 IEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARG 438
+ ++ + ++ + EA TM E N + W S++T G
Sbjct: 160 VNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNG 206
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 151/468 (32%), Positives = 255/468 (54%), Gaps = 18/468 (3%)
Query: 71 LTKFAATSSTF--NAI--HYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSS 126
+ KF S F N++ Y++S LF A D + +I F S S
Sbjct: 129 IVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRN-GSASE 187
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFG-FDDDLHVQNTMI 185
+ + M + GV N+ T VLKA + D+R G++VHG ++ G D+ + ++++
Sbjct: 188 AMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLV 247
Query: 186 HMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFRE 245
MY A KVFDE P + VTW+A+I GY + + + +F E
Sbjct: 248 DMYGKCSCYDD-----------AQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEE 296
Query: 246 MQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGD 305
M V P+E T+ SVL+ACA +GAL G+ + Y+ I + LID++ KCG
Sbjct: 297 MLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGC 356
Query: 306 VDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSA 365
+++A+ +F ++ + +WT++I G A HG +A LF M+ V P++V+F+ VLSA
Sbjct: 357 LEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSA 416
Query: 366 CCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQI 425
C H LV++GR F SM+G F + PK +HY CMVDL R G ++EA + MP+EP +
Sbjct: 417 CAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNV 476
Query: 426 IWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMD 485
+W ++ +C + +LG+ + +++ +P+H Y LL+N+Y++ + W++ +VR+ M
Sbjct: 477 VWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMK 536
Query: 486 MRGMKKVPGSTMIELNNEMCEFVA-GDKSHDQYKQIYEMVDEMGREIK 532
+ + K PG + IE+ ++CEF+A DK + +Y+ +D +G +++
Sbjct: 537 DQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMR 584
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 201/420 (47%), Gaps = 54/420 (12%)
Query: 131 YRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXX 190
YR M R GV+P++ T+P +LKA L D + H +VKFG D D V+N++I Y
Sbjct: 92 YRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQ-FHAHIVKFGLDSDPFVRNSLISGY-- 148
Query: 191 XXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMG 250
A ++FD + D VTW+AMI G+ R G +S A+ F EM+ G
Sbjct: 149 ---------SSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTG 199
Query: 251 VCPDEITMVSVLTACADLGALELGKWLES-YIEWKKIPKSVELCNALIDMFAKCGDVDKA 309
V +E+T+VSVL A + + G+ + Y+E ++ V + ++L+DM+ KC D A
Sbjct: 200 VAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDA 259
Query: 310 MNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHS 369
+F +M S +V+WT++I G + + +F+EM++ V P++ + VLSAC H
Sbjct: 260 QKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHV 319
Query: 370 KLVDKGRSYF-----NSMEGNFGI-VPKIEHY---GC---------------------MV 399
+ +GR NS+E N I+ Y GC M+
Sbjct: 320 GALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMI 379
Query: 400 DLLSRAGFVKEALDFVRTM---PVEPNQIIWRSIITACHARGELKLGESI---SKELLRN 453
+ + G+ ++A D TM V PN++ + ++++AC G ++ G + K
Sbjct: 380 NGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNM 439
Query: 454 EPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVP----GSTMIELNNEMCEFVA 509
EP + +Y + +++ + E+ + E M M V GS ++ + E+ ++ A
Sbjct: 440 EPKAD-HYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAA 498
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 152/495 (30%), Positives = 267/495 (53%), Gaps = 24/495 (4%)
Query: 130 LYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYX 189
L M++ V PN T VL+AC+ L +R +H +++ D ++ V N+++ Y
Sbjct: 414 LLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYA 473
Query: 190 XXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVM 249
A V + D++T+++++ + G A+ + M
Sbjct: 474 SSRKVD-----------YAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGD 522
Query: 250 GVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKA 309
G+ D++++ ++A A+LGALE GK L Y + + N+L+DM++KCG ++ A
Sbjct: 523 GIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDA 582
Query: 310 MNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHS 369
+F ++ + +VSW ++ GLA +G S A+S F+EM + EPD V+F+ +LSAC +
Sbjct: 583 KKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNG 642
Query: 370 KLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRS 429
+L D G YF M+ + I P++EHY +V +L RAG ++EA V TM ++PN +I+++
Sbjct: 643 RLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKT 702
Query: 430 IITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGM 489
++ AC RG L LGE ++ + L P+ + Y+LL+++Y + + E K R +M + +
Sbjct: 703 LLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRL 762
Query: 490 KKVPGSTMIELNNEMCEFVAGDKSH-DQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDID 548
K G + +E+ ++ FV+ D + D+ IY ++ + EIKR G
Sbjct: 763 SKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFGS-----------P 811
Query: 549 EEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVR 608
E+A + HS K A+ + + P P+ +VKN +C+DCH ++++ +++I VR
Sbjct: 812 YRGNENASF-HSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVR 870
Query: 609 DRNRFHHFKNGLCSC 623
D N+ H FKNG CSC
Sbjct: 871 DGNQVHIFKNGECSC 885
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 211/473 (44%), Gaps = 36/473 (7%)
Query: 108 FLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHG 167
F + +I AF + Q +S L L+ M+ G PN+FT+ V+++CAGL D+ G VHG
Sbjct: 90 FAWTVMISAFTKS-QEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHG 148
Query: 168 SVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMI 227
SV+K GF+ + V +++ +Y A ++F D+++W+ MI
Sbjct: 149 SVIKTGFEGNSVVGSSLSDLYSKCGQFKE-----------ACELFSSLQNADTISWTMMI 197
Query: 228 GGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIP 287
A+ + EM GV P+E T V +L A + LG LE GK + S I + IP
Sbjct: 198 SSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIP 256
Query: 288 KSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEM 347
+V L +L+D +++ ++ A+ + + WTSV+ G + R EAV F EM
Sbjct: 257 LNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEM 316
Query: 348 VEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGF 407
G++P++ ++ +LS C + +D G+ +S G + +VD+ +
Sbjct: 317 RSLGLQPNNFTYSAILSLCSAVRSLDFGKQ-IHSQTIKVGFEDSTDVGNALVDMYMKCSA 375
Query: 408 VKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNI 467
+ V V PN + W ++I G ++ + E+++ E E N V LS +
Sbjct: 376 SEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREV--EPNVVTLSGV 433
Query: 468 YAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEM 527
+ +V E+ + V G ++ N + + A + D +
Sbjct: 434 LRACSKLRHVRRVLEIHAYLLRRHVDGEMVV--GNSLVDAYASSRKVDYAWNVI------ 485
Query: 528 GREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRI 580
R +KR + TS V + + L KH +A +++N G IR+
Sbjct: 486 -RSMKRRDNITYTSLV-------TRFNELGKHE----MALSVINYMYGDGIRM 526
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 147/336 (43%), Gaps = 44/336 (13%)
Query: 149 VLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLA 208
+L C S R+G +H V+KFG ++L + N ++ +Y A
Sbjct: 30 ILSFCESNSS-RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWN-----------A 77
Query: 209 GKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADL 268
K+FDE W+ MI + + + A+ LF EM G P+E T SV+ +CA L
Sbjct: 78 RKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGL 137
Query: 269 GALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVI 328
+ G + + + + ++L D+++KCG +A LF + + +SWT +I
Sbjct: 138 RDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMI 197
Query: 329 VGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSA----------CCHSKLVDKG--- 375
L + EA+ + EMV+ GV P++ +F+ +L A HS ++ +G
Sbjct: 198 SSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPL 257
Query: 376 -----------RSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFV-----KEALDF---VR 416
S F+ ME ++ + +GFV KEA+ +R
Sbjct: 258 NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMR 317
Query: 417 TMPVEPNQIIWRSIITACHARGELKLGESISKELLR 452
++ ++PN + +I++ C A L G+ I + ++
Sbjct: 318 SLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIK 353
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/444 (32%), Positives = 243/444 (54%), Gaps = 12/444 (2%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
++ ++ ++ ++ +S + ++L+ M G+ P+++T VL AC+ + L GK +
Sbjct: 286 NSITWSAMVTGYSQNGESLEA-VKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQL 344
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H ++K GF+ L ++ MY A K FD + D W++
Sbjct: 345 HSFLLKLGFERHLFATTALVDMYAKAGCLAD-----------ARKGFDCLQERDVALWTS 393
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
+I GY + + A+ L+R M+ G+ P++ TM SVL AC+ L LELGK + +
Sbjct: 394 LISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHG 453
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
V + +AL M++KCG ++ +FR+ + +VSW ++I GL+ +G+G EA+ LF+
Sbjct: 454 FGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFE 513
Query: 346 EMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRA 405
EM+ +G+EPDDV+F+ ++SAC H V++G YFN M G+ PK++HY CMVDLLSRA
Sbjct: 514 EMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRA 573
Query: 406 GFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLS 465
G +KEA +F+ + ++ +WR +++AC G+ +LG ++L+ S YV LS
Sbjct: 574 GQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLS 633
Query: 466 NIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVD 525
IY L R +V + M G+ K G + IEL N+ FV GD H ++ ++V
Sbjct: 634 GIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVC 693
Query: 526 EMGREIKRAGYVPTTSQVLLDIDE 549
+ R++ G+V ++ +E
Sbjct: 694 LVSRQMIEEGFVTVLDSSFVEEEE 717
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 169/373 (45%), Gaps = 47/373 (12%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPF--VLKACAGLSDLRLGK 163
+ + ++T++ +A T ++++ LR + Y F VL + A + LG+
Sbjct: 183 NTYTWSTMVSGYA-TRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGR 241
Query: 164 AVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTW 223
+H +K G + + N ++ MY A K+FD S +S+TW
Sbjct: 242 QIHCITIKNGLLGFVALSNALVTMYSKCESLNE-----------ACKMFDSSGDRNSITW 290
Query: 224 SAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEW 283
SAM+ GY++ G S AV LF M G+ P E T+V VL AC+D+ LE GK L S++
Sbjct: 291 SAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK 350
Query: 284 KKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSL 343
+ + AL+DM+AK G + A F + + WTS+I G + EA+ L
Sbjct: 351 LGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALIL 410
Query: 344 FDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRS-YFNSMEGNFGI-VP----------- 390
+ M G+ P+D + VL AC ++ G+ + ++++ FG+ VP
Sbjct: 411 YRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSK 470
Query: 391 -----------------KIEHYGCMVDLLSRAGFVKEALDFVRTM---PVEPNQIIWRSI 430
+ + M+ LS G EAL+ M +EP+ + + +I
Sbjct: 471 CGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNI 530
Query: 431 ITACHARGELKLG 443
I+AC +G ++ G
Sbjct: 531 ISACSHKGFVERG 543
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 198/461 (42%), Gaps = 63/461 (13%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSG--LQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGK 163
D +N+LI ++ SS +QL+R M ++PN +T + KA + L +G+
Sbjct: 79 DVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGR 138
Query: 164 AVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTW 223
H VVK D++V +++ MY KVF P+ ++ TW
Sbjct: 139 QAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGL-----------KVFAYMPERNTYTW 187
Query: 224 SAMIGGYARRGHSSRAV---GLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESY 280
S M+ GYA RG A+ LF + G D + +VL++ A + LG+ +
Sbjct: 188 STMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCI 246
Query: 281 IEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEA 340
+ V L NAL+ M++KC +++A +F ++W++++ G + +G EA
Sbjct: 247 TIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEA 306
Query: 341 VSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM------EGNFGIVPKIEH 394
V LF M G++P + + +GVL+AC +++G+ + + F ++
Sbjct: 307 VKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDM 366
Query: 395 Y---GCMVD-------LLSR---------AGFVK-----EALDFVRTMP---VEPNQIIW 427
Y GC+ D L R +G+V+ EAL R M + PN
Sbjct: 367 YAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTM 426
Query: 428 RSIITACHARGELKLGESISKELLRNEPTHESNY-VLLSNIYAKLRRWEQKTKVREMMDM 486
S++ AC + L+LG+ + +++ E LS +Y+K E V
Sbjct: 427 ASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLV------ 480
Query: 487 RGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEM 527
++ P ++ N ++G + Q + E+ +EM
Sbjct: 481 --FRRTPNKDVVSWN----AMISGLSHNGQGDEALELFEEM 515
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 131/288 (45%), Gaps = 20/288 (6%)
Query: 158 DLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPK 217
+L G+AVHG +++ G + N +++ Y A +F+
Sbjct: 29 NLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAK-----------AHSIFNAIIC 77
Query: 218 TDSVTWSAMIGGYARRGHSSRA---VGLFREMQVMGVCPDEITMVSVLTACADLGALELG 274
D V+W+++I GY++ G S + + LFREM+ + P+ T+ + A + L + +G
Sbjct: 78 KDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVG 137
Query: 275 KWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMH 334
+ + + + + +L+ M+ K G V+ + +F M +W++++ G A
Sbjct: 138 RQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATR 197
Query: 335 GRGSEAVSLFDEMV---EQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPK 391
GR EA+ +F+ + E+G + D V F VLS+ + V GR + + G++
Sbjct: 198 GRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQ-IHCITIKNGLLGF 255
Query: 392 IEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGE 439
+ +V + S+ + EA + + N I W +++T GE
Sbjct: 256 VALSNALVTMYSKCESLNEACKMFDSSG-DRNSITWSAMVTGYSQNGE 302
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 103/238 (43%), Gaps = 25/238 (10%)
Query: 253 PDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNL 312
P T++ LT + L G+ + I ++ N L++ +AKCG + KA ++
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 313 FRQMDSCTIVSWTSVIVGLAMHGRGSEA---VSLFDEMVEQGVEPDDVSFIGVLSACCHS 369
F + +VSW S+I G + +G S + + LF EM Q + P+ + G+ A
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 370 KLVDKGRSYFNSMEGNFGIVPKIEHYG------CMVDLLSRAGFVKEALDFVRTMPVEPN 423
+ GR +V K+ +G +V + +AG V++ L MP E N
Sbjct: 132 QSSTVGRQ-------AHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERN 183
Query: 424 QIIWRSIITACHARGELKLGESISKELLR-NEPTHESNYV-------LLSNIYAKLRR 473
W ++++ RG ++ + LR E +S+YV L + IY L R
Sbjct: 184 TYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGR 241
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 129/322 (40%), Positives = 210/322 (65%), Gaps = 6/322 (1%)
Query: 210 KVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMG-VCPDEITMVSVLTACADL 268
+VFD+ P+ + +W+ +I GYA+ G S +G F+ M G V P++ TM VL+ACA L
Sbjct: 142 RVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKL 201
Query: 269 GALELGKWLESYIE---WKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
GA + GKW+ Y E + K+ +V+ NALIDM+ KCG ++ AM +F+ + ++SW
Sbjct: 202 GAFDFGKWVHKYGETLGYNKVDVNVK--NALIDMYGKCGAIEIAMEVFKGIKRRDLISWN 259
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
++I GLA HG G+EA++LF EM G+ PD V+F+GVL AC H LV+ G +YFNSM +
Sbjct: 260 TMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTD 319
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGES 445
F I+P+IEH GC+VDLLSRAGF+ +A++F+ MPV+ + +IW +++ A ++ +GE
Sbjct: 320 FSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEV 379
Query: 446 ISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMC 505
+EL++ EP + +N+V+LSNIY R++ +++ M G KK G + IE ++ +
Sbjct: 380 ALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLV 439
Query: 506 EFVAGDKSHDQYKQIYEMVDEM 527
+F + + H + +++ ++ E+
Sbjct: 440 KFYSSGEKHPRTEELQRILREL 461
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 111/227 (48%), Gaps = 16/227 (7%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYG-VVPNKFTYPFVLKACAGLSDLRLGKA 164
+ F +N LI+ +A + S L ++ M+ G VVPN T VL ACA L GK
Sbjct: 151 NVFSWNGLIKGYAQNGRV-SEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKW 209
Query: 165 VHGSVVKFGFDD-DLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTW 223
VH G++ D++V+N +I MY +A +VF + D ++W
Sbjct: 210 VHKYGETLGYNKVDVNVKNALIDMYGKCGAIE-----------IAMEVFKGIKRRDLISW 258
Query: 224 SAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELG-KWLESYIE 282
+ MI G A GH + A+ LF EM+ G+ PD++T V VL AC +G +E G + S
Sbjct: 259 NTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFT 318
Query: 283 WKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD-SCTIVSWTSVI 328
I +E C ++D+ ++ G + +A+ +M V W +++
Sbjct: 319 DFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLL 365
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 108/234 (46%), Gaps = 14/234 (5%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPD-EITMVSVLTACA 266
A KVF E + + V W++MI GY A F + P+ +I + + + +
Sbjct: 47 ANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYF------DLSPERDIVLWNTMIS-- 98
Query: 267 DLGALELGKWLESYIEWKKIP-KSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
G +E+G LE+ + ++P + V N +++ +A GD++ +F M + SW
Sbjct: 99 --GYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWN 156
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQG-VEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEG 384
+I G A +GR SE + F MV++G V P+D + VLSAC D G+ E
Sbjct: 157 GLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGET 216
Query: 385 NFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARG 438
+ ++D+ + G ++ A++ + + + I W ++I A G
Sbjct: 217 LGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIK-RRDLISWNTMINGLAAHG 269
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 135/413 (32%), Positives = 228/413 (55%), Gaps = 13/413 (3%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+N++ +A++ ++ + LY MLR P+ T+ + +C L G+ +H
Sbjct: 224 WNSMFKAYSVFGEAFDA-FGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHA 282
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
+ G D D+ NT I MY A +FD V+W+ MI G
Sbjct: 283 IHLGTDQDIEAINTFISMYSKSEDTCS-----------ARLLFDIMTSRTCVSWTVMISG 331
Query: 230 YARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPK- 288
YA +G A+ LF M G PD +T++S+++ C G+LE GKW+++ + +
Sbjct: 332 YAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRD 391
Query: 289 SVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMV 348
+V +CNALIDM++KCG + +A ++F T+V+WT++I G A++G EA+ LF +M+
Sbjct: 392 NVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMI 451
Query: 349 EQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFV 408
+ +P+ ++F+ VL AC HS ++KG YF+ M+ + I P ++HY CMVDLL R G +
Sbjct: 452 DLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKL 511
Query: 409 KEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIY 468
+EAL+ +R M +P+ IW +++ AC +K+ E ++ L EP + YV ++NIY
Sbjct: 512 EEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIY 571
Query: 469 AKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIY 521
A W+ ++R +M R +KK PG ++I++N + F G+ H + + IY
Sbjct: 572 AAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIY 624
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 146/280 (52%), Gaps = 14/280 (5%)
Query: 128 LQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHM 187
L L+R M R G PN FT+PFV KACA L+D+ + VH ++K F D+ V + M
Sbjct: 37 LLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDM 96
Query: 188 YXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQ 247
+ A KVF+ P+ D+ TW+AM+ G+ + GH+ +A LFREM+
Sbjct: 97 F-----------VKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMR 145
Query: 248 VMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVD 307
+ + PD +T+++++ + + +L+L + + + + V + N I + KCGD+D
Sbjct: 146 LNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLD 205
Query: 308 KAMNLFRQMDSC--TIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSA 365
A +F +D T+VSW S+ ++ G +A L+ M+ + +PD +FI + ++
Sbjct: 206 SAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAAS 265
Query: 366 CCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRA 405
C + + + +GR +S + G IE + + S++
Sbjct: 266 CQNPETLTQGR-LIHSHAIHLGTDQDIEAINTFISMYSKS 304
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 163/390 (41%), Gaps = 44/390 (11%)
Query: 64 LINNPLVLTKFAATSST-----FNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFA 118
LI +P F T++ N++ YA R DA +N ++ F
Sbjct: 78 LIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVF--------ERMPERDATTWNAMLSGFC 129
Query: 119 HTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDL 178
+ + + L+R M + P+ T ++++ + L+L +A+H ++ G D +
Sbjct: 130 QSGHTDKA-FSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQV 188
Query: 179 HVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSR 238
V NT I Y L + D +T V+W++M Y+ G +
Sbjct: 189 TVANTWISTYGKCGDLDSAK--------LVFEAIDRGDRT-VVSWNSMFKAYSVFGEAFD 239
Query: 239 AVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALID 298
A GL+ M PD T +++ +C + L G+ + S+ + +E N I
Sbjct: 240 AFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFIS 299
Query: 299 MFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVS 358
M++K D A LF M S T VSWT +I G A G EA++LF M++ G +PD V+
Sbjct: 300 MYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVT 359
Query: 359 FIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGC----------MVDLLSRAGFV 408
+ ++S C F S+E I + + YGC ++D+ S+ G +
Sbjct: 360 LLSLISGC----------GKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSI 409
Query: 409 KEALDFVRTMPVEPNQIIWRSIITACHARG 438
EA D P E + W ++I G
Sbjct: 410 HEARDIFDNTP-EKTVVTWTTMIAGYALNG 438
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%)
Query: 223 WSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIE 282
W+ I R ++ LFREM+ G P+ T V ACA L + + + +++
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 283 WKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVS 342
V + A +DMF KC VD A +F +M +W +++ G G +A S
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 343 LFDEMVEQGVEPDDVSFIGVLSACCHSK 370
LF EM + PD V+ + ++ + K
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQSASFEK 167
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/426 (33%), Positives = 230/426 (53%), Gaps = 45/426 (10%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
+ +FN +I+ ++ S L + +M G+ +++TY +LK+C+ LSDLR GK V
Sbjct: 66 NVLVFNAMIKCYSLVGPPLES-LSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCV 124
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
HG +++ GF ++ ++ +Y A KVFDE + + V W+
Sbjct: 125 HGELIRTGFHRLGKIRIGVVELYTSGGRMGD-----------AQKVFDEMSERNVVVWNL 173
Query: 226 MIGGYARRGHSSRAVGLFREMQV-------------------------------MGVCPD 254
MI G+ G R + LF++M G PD
Sbjct: 174 MIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPD 233
Query: 255 EITMVSVLTACADLGALELGKWLESYIEWKKIPKS-VELCNALIDMFAKCGDVDKAMNLF 313
E T+V+VL A LG L+ GKW+ S E + K + + NAL+D + K GD++ A +F
Sbjct: 234 EATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIF 293
Query: 314 RQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQG-VEPDDVSFIGVLSACCHSKLV 372
R+M +VSW ++I G A++G+G + LFD M+E+G V P++ +F+GVL+ C ++ V
Sbjct: 294 RKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQV 353
Query: 373 DKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIIT 432
++G F M F + + EHYG MVDL+SR+G + EA F++ MPV N +W S+++
Sbjct: 354 ERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLS 413
Query: 433 ACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKV 492
AC + G++KL E + EL++ EP + NYVLLSN+YA+ RW+ KVR +M ++K
Sbjct: 414 ACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKS 473
Query: 493 PGSTMI 498
G + I
Sbjct: 474 TGQSTI 479
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 121/267 (45%), Gaps = 32/267 (11%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A +VF + + ++AMI Y+ G ++ F M+ G+ DE T +L +C+
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 268 LGALELGKW--------------------LESYIEWKKI-----------PKSVELCNAL 296
L L GK +E Y ++ ++V + N +
Sbjct: 115 LSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLM 174
Query: 297 IDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDD 356
I F GDV++ ++LF+QM +IVSW S+I L+ GR EA+ LF EM++QG +PD+
Sbjct: 175 IRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDE 234
Query: 357 VSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVR 416
+ + VL ++D G+ ++ E + I +VD ++G ++ A R
Sbjct: 235 ATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFR 294
Query: 417 TMPVEPNQIIWRSIITACHARGELKLG 443
M N + W ++I+ G+ + G
Sbjct: 295 KMQ-RRNVVSWNTLISGSAVNGKGEFG 320
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/323 (39%), Positives = 198/323 (61%), Gaps = 2/323 (0%)
Query: 207 LAGKVFDESP--KTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTA 264
+A +FD+ P + VTW+ +I GYA +G A L +M G+ D ++S+L A
Sbjct: 265 MARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAA 324
Query: 265 CADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSW 324
C + G L LG + S ++ + + + NAL+DM+AKCG++ KA ++F + +VSW
Sbjct: 325 CTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSW 384
Query: 325 TSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEG 384
+++ GL +HG G EA+ LF M +G+ PD V+FI VL +C H+ L+D+G YF SME
Sbjct: 385 NTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEK 444
Query: 385 NFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGE 444
+ +VP++EHYGC+VDLL R G +KEA+ V+TMP+EPN +IW +++ AC E+ + +
Sbjct: 445 VYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAK 504
Query: 445 SISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEM 504
+ L++ +P NY LLSNIYA WE +R M G++K G++ +EL + +
Sbjct: 505 EVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGI 564
Query: 505 CEFVAGDKSHDQYKQIYEMVDEM 527
EF DKSH + QIY+M+ +
Sbjct: 565 HEFTVFDKSHPKSDQIYQMLGSL 587
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 176/355 (49%), Gaps = 30/355 (8%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
+ L N+LIRA A Q + ++ M R+G+ + FTYPF+LKAC+G S L + K +
Sbjct: 81 NVHLCNSLIRAHAQNSQPYQAFF-VFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMM 139
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H + K G D++V N +I Y A K+F++ + D+V+W++
Sbjct: 140 HNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRD---------AMKLFEKMSERDTVSWNS 190
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
M+GG + G A LF EM D I+ ++L A E+ K E + +K
Sbjct: 191 MLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYAR--CREMSKAFELF---EK 241
Query: 286 IPKSVELCNALIDM-FAKCGDVDKAMNLFRQM--DSCTIVSWTSVIVGLAMHGRGSEAVS 342
+P+ + + + M ++K GD++ A +F +M + +V+WT +I G A G EA
Sbjct: 242 MPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADR 301
Query: 343 LFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSME-GNFGIVPKIEHYGCMVDL 401
L D+MV G++ D + I +L+AC S L+ G + ++ N G + ++D+
Sbjct: 302 LVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYV--LNALLDM 359
Query: 402 LSRAGFVKEALDFVRTMPVEPNQIIWRSIITAC----HARGELKLGESISKELLR 452
++ G +K+A D +P + + + W +++ H + ++L + +E +R
Sbjct: 360 YAKCGNLKKAFDVFNDIP-KKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIR 413
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 136/305 (44%), Gaps = 26/305 (8%)
Query: 150 LKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAG 209
L CA L+ + K +H +++ +DLH+ +I LA
Sbjct: 26 LPKCANLNQV---KQLHAQIIRRNLHEDLHIAPKLI-----------SALSLCRQTNLAV 71
Query: 210 KVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLG 269
+VF++ + + +++I +A+ +A +F EMQ G+ D T +L AC+
Sbjct: 72 RVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQS 131
Query: 270 ALELGKWLESYIEWKKIPKSVELCNALIDMFAKCG--DVDKAMNLFRQMDSCTIVSWTSV 327
L + K + ++IE + + + NALID +++CG V AM LF +M VSW S+
Sbjct: 132 WLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSM 191
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG 387
+ GL G +A LFDEM ++ D +S+ +L + + K F M
Sbjct: 192 LGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPERNT 247
Query: 388 IVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEP-NQIIWRSIITACHARGELKLGESI 446
+ + MV S+AG ++ A MP+ N + W II +G LK + +
Sbjct: 248 V-----SWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRL 302
Query: 447 SKELL 451
+++
Sbjct: 303 VDQMV 307
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/331 (38%), Positives = 209/331 (63%), Gaps = 5/331 (1%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQ-VMGVCPDEITMVSVLTACA 266
A K+FD P+ + V+W+ MIGGY + + LF+EMQ + PD++T++SVL A +
Sbjct: 226 ARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAIS 285
Query: 267 DLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTS 326
D GAL LG+W +++ KK+ K V++C A++DM++KCG+++KA +F +M + SW +
Sbjct: 286 DTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNA 345
Query: 327 VIVGLAMHGRGSEAVSLF-DEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
+I G A++G A+ LF M+E+ +PD+++ + V++AC H LV++GR +F+ M
Sbjct: 346 MIHGYALNGNARAALDLFVTMMIEE--KPDEITMLAVITACNHGGLVEEGRKWFHVMR-E 402
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGES 445
G+ KIEHYGCMVDLL RAG +KEA D + MP EPN II S ++AC +++ E
Sbjct: 403 MGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAER 462
Query: 446 ISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMC 505
I K+ + EP ++ NYVLL N+YA +RW+ V+ +M KK G ++IE+N +
Sbjct: 463 ILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVS 522
Query: 506 EFVAGDKSHDQYKQIYEMVDEMGREIKRAGY 536
EF++GD +H + I+ ++ ++ + Y
Sbjct: 523 EFISGDTTHPHRRSIHLVLGDLLMHMNEEKY 553
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 138/430 (32%), Positives = 243/430 (56%), Gaps = 11/430 (2%)
Query: 104 SFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGK 163
S D +N++I F+ + K S +L+ M R+ V + +TY +L AC+G GK
Sbjct: 267 SKDLISWNSMIAGFS-KHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGK 325
Query: 164 AVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTW 223
++HG V+K G + N +I MY A +F+ D ++W
Sbjct: 326 SLHGMVIKKGLEQVTSATNALISMYIQFPTGTMED---------ALSLFESLKSKDLISW 376
Query: 224 SAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEW 283
+++I G+A++G S AV F ++ + D+ ++L +C+DL L+LG+ + +
Sbjct: 377 NSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATK 436
Query: 284 KKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDS-CTIVSWTSVIVGLAMHGRGSEAVS 342
+ + ++LI M++KCG ++ A F+Q+ S + V+W ++I+G A HG G ++
Sbjct: 437 SGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLD 496
Query: 343 LFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLL 402
LF +M Q V+ D V+F +L+AC H+ L+ +G N ME + I P++EHY VDLL
Sbjct: 497 LFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLL 556
Query: 403 SRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYV 462
RAG V +A + + +MP+ P+ ++ ++ + C A GE+++ ++ LL EP YV
Sbjct: 557 GRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYV 616
Query: 463 LLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYE 522
LS++Y+ L++WE+K V++MM RG+KKVPG + IE+ N++ F A D+S+ + IY
Sbjct: 617 SLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYM 676
Query: 523 MVDEMGREIK 532
M+ ++ +E++
Sbjct: 677 MIKDLTQEMQ 686
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 170/380 (44%), Gaps = 26/380 (6%)
Query: 63 GLINNPLVLTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQ 122
G I++ V + + F + YA + LF + P D+ +NT+I + +
Sbjct: 30 GSISDIYVSNRILDSYIKFGFLGYA-NMLFDEMPKR-------DSVSWNTMISGYTSCGK 81
Query: 123 SKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQN 182
+ + L+ M R G + +++ +LK A + LG+ VHG V+K G++ +++V +
Sbjct: 82 LEDAWC-LFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGS 140
Query: 183 TMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGL 242
+++ MY A + F E + +SV+W+A+I G+ + A L
Sbjct: 141 SLVDMYAKCERVED-----------AFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWL 189
Query: 243 FREMQV-MGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFA 301
M++ V D T +LT D L K + + + + + +CNA+I +A
Sbjct: 190 LGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYA 249
Query: 302 KCGDVDKAMNLFRQM-DSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFI 360
CG V A +F + S ++SW S+I G + H A LF +M VE D ++
Sbjct: 250 DCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYT 309
Query: 361 GVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSR--AGFVKEALDFVRTM 418
G+LSAC + G+S + M G+ ++ + + G +++AL ++
Sbjct: 310 GLLSACSGEEHQIFGKS-LHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESL 368
Query: 419 PVEPNQIIWRSIITACHARG 438
+ I W SIIT +G
Sbjct: 369 K-SKDLISWNSIITGFAQKG 387
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 31/188 (16%)
Query: 144 FTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXX 203
T+ + +K C +SD+ + + S +KFGF
Sbjct: 21 LTHCYAIK-CGSISDIYVSNRILDSYIKFGF----------------------------- 50
Query: 204 XXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLT 263
A +FDE PK DSV+W+ MI GY G A LF M+ G D + +L
Sbjct: 51 -LGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLK 109
Query: 264 ACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVS 323
A + +LG+ + + +V + ++L+DM+AKC V+ A F+++ VS
Sbjct: 110 GIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVS 169
Query: 324 WTSVIVGL 331
W ++I G
Sbjct: 170 WNALIAGF 177
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 160/537 (29%), Positives = 257/537 (47%), Gaps = 85/537 (15%)
Query: 70 VLTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQ 129
++ +F ++F + A S T + + F++N L + F T L+
Sbjct: 807 LMNQFITACTSFKRLDLAVS--------TMTQMQEPNVFVYNALFKGFV-TCSHPIRSLE 857
Query: 130 LYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYX 189
LY MLR V P+ +TY ++KA + S R G+++ + KFGF + +Q T+I Y
Sbjct: 858 LYVRMLRDSVSPSSYTYSSLVKASSFAS--RFGESLQAHIWKFGFGFHVKIQTTLIDFYS 915
Query: 190 XXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYAR----------------- 232
A KVFDE P+ D + W+ M+ Y R
Sbjct: 916 ATGRIRE-----------ARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEK 964
Query: 233 --------------RGHSSRAVGLFREMQVM----------------------------- 249
G+ +A LF +M V
Sbjct: 965 NEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMM 1024
Query: 250 --GVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVD 307
G+ PDE+TM +V++ACA LG LE+GK + Y V + +AL+DM++KCG ++
Sbjct: 1025 EEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLE 1084
Query: 308 KAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACC 367
+A+ +F + + W S+I GLA HG EA+ +F +M + V+P+ V+F+ V +AC
Sbjct: 1085 RALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACT 1144
Query: 368 HSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIW 427
H+ LVD+GR + SM ++ IV +EHYG MV L S+AG + EAL+ + M EPN +IW
Sbjct: 1145 HAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIW 1204
Query: 428 RSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMR 487
+++ C L + E +L+ EP + Y LL ++YA+ RW ++R M
Sbjct: 1205 GALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMREL 1264
Query: 488 GMKKV-PGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQV 543
G++K+ PG++ I ++ F A DKSH ++ ++DE+ ++ AGYV T V
Sbjct: 1265 GIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQETENV 1321
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 149/438 (34%), Positives = 222/438 (50%), Gaps = 38/438 (8%)
Query: 76 ATSSTFNAIHYATS-FLFSDDPTTAPRASSFDAFLFNTLIRAFA-HTPQSKSSGLQLYRT 133
+ S++ + YATS F F +P+T F FNT+IR H P S SS + +
Sbjct: 56 SASASKEVVSYATSVFRFITNPST---------FCFNTIIRICTLHEPSSLSSK-RFFVE 105
Query: 134 MLRYGVVPNKFTYPFVLKACAGL--SDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXX 191
M R V P+ T+PFV KACA DL L K +H ++FG DL NT+I +Y
Sbjct: 106 MRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLI 165
Query: 192 XXXXXXXX--------------------XXXXXXXLAGKVFDESPKTDSVTWSAMIGGYA 231
A ++FD P D V+W+++I GYA
Sbjct: 166 APIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYA 225
Query: 232 RRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVE 291
+ H A+ LF EM +G+ PD + +VS L+ACA G + GK + Y + K++
Sbjct: 226 QMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSF 285
Query: 292 LCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQG 351
L L+D +AKCG +D AM +F T+ +W ++I GLAMHG G V F +MV G
Sbjct: 286 LATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSG 345
Query: 352 VEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEA 411
++PD V+FI VL C HS LVD+ R+ F+ M + + +++HYGCM DLL RAG ++EA
Sbjct: 346 IKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEA 405
Query: 412 LDFVRTMPVEPNQ----IIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNI 467
+ + MP + + W ++ C G +++ E + + P Y ++ +
Sbjct: 406 AEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEM 465
Query: 468 YAKLRRWEQKTKVREMMD 485
YA RWE+ KVRE++D
Sbjct: 466 YANAERWEEVVKVREIID 483
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 234/414 (56%), Gaps = 13/414 (3%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+N++I+ + SKS +++ M+ G P++ T +L AC+ +L GK +HG V
Sbjct: 277 WNSMIKGYVAKGDSKSC-VEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYV 335
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
++ + D++V ++I +Y LA VF ++ K + +W+ MI
Sbjct: 336 IRSVVNADIYVNCSLIDLYFKCGEAN-----------LAETVFSKTQKDVAESWNVMISS 384
Query: 230 YARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKS 289
Y G+ +AV ++ +M +GV PD +T SVL AC+ L ALE GK + I ++
Sbjct: 385 YISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETD 444
Query: 290 VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVE 349
L +AL+DM++KCG+ +A +F + +VSWT +I HG+ EA+ FDEM +
Sbjct: 445 ELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQK 504
Query: 350 QGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVK 409
G++PD V+ + VLSAC H+ L+D+G +F+ M +GI P IEHY CM+D+L RAG +
Sbjct: 505 FGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLL 564
Query: 410 EALDFVRTMP-VEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIY 468
EA + ++ P N + ++ +AC E LG+ I++ L+ N P S Y++L N+Y
Sbjct: 565 EAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLY 624
Query: 469 AKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYE 522
A W+ +VR M G++K PG + IE+++++C F A D+SH + + +YE
Sbjct: 625 ASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYE 678
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 168/354 (47%), Gaps = 14/354 (3%)
Query: 86 YATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFT 145
YA LF + D +NT+I F + +++ + L+L+ M G PN +
Sbjct: 152 YAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKA-LELFGRMESSGFEPNSVS 210
Query: 146 YPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXX 205
+ AC+ L L GK +H VK GF+ D +V + ++ MY
Sbjct: 211 LTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLE---------- 260
Query: 206 XLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTAC 265
+A +VF + P+ V W++MI GY +G S V + M + G P + T+ S+L AC
Sbjct: 261 -VAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMAC 319
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
+ L GK++ Y+ + + + +LID++ KCG+ + A +F + SW
Sbjct: 320 SRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWN 379
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
+I G +AV ++D+MV GV+PD V+F VL AC ++KG+ S+ +
Sbjct: 380 VMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISES 439
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGE 439
++ ++D+ S+ G KEA ++P + + + W +I+A + G+
Sbjct: 440 RLETDEL-LLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMISAYGSHGQ 491
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 191/406 (47%), Gaps = 59/406 (14%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGV-VPNKFTYPFVLKACAGLSDLRLGKA 164
D +++N+L+ ++ + L++++ +L + VP+ FT+P V+KA L LG+
Sbjct: 70 DVYIWNSLMSGYSKNSMFHDT-LEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRM 128
Query: 165 VHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWS 224
+H VVK G+ D+ V ++++ MY +VFDE P+ D +W+
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSL-----------QVFDEMPERDVASWN 177
Query: 225 AMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWK 284
+I + + G + +A+ LF M+ G P+ +++ ++AC+ L LE GK I K
Sbjct: 178 TVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGK----EIHRK 233
Query: 285 KIPKSVEL----CNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEA 340
+ K EL +AL+DM+ KC ++ A +F++M ++V+W S+I G G
Sbjct: 234 CVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSC 293
Query: 341 VSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGR-----------------------S 377
V + + M+ +G P + +L AC S+ + G+
Sbjct: 294 VEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDL 353
Query: 378 YFNSMEGNFG--IVPKI-----EHYGCMV-DLLSRAGFVK--EALDFVRTMPVEPNQIIW 427
YF E N + K E + M+ +S + K E D + ++ V+P+ + +
Sbjct: 354 YFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTF 413
Query: 428 RSIITACHARGELKLGESISKELLRNEPTHESNYVLLS---NIYAK 470
S++ AC L+ G+ I L +E E++ +LLS ++Y+K
Sbjct: 414 TSVLPACSQLAALEKGKQI--HLSISESRLETDELLLSALLDMYSK 457
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 134/297 (45%), Gaps = 18/297 (6%)
Query: 149 VLKACAGLS-DLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXL 207
+L+ C + LR K VH ++ G D+ + ++I++Y
Sbjct: 9 LLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCS----------- 57
Query: 208 AGKVFDE-SPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVC-PDEITMVSVLTAC 265
A VF+ ++D W++++ GY++ + +F+ + +C PD T +V+ A
Sbjct: 58 ARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAY 117
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
LG LG+ + + + V + ++L+ M+AK + ++ +F +M + SW
Sbjct: 118 GALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWN 177
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRS-YFNSMEG 384
+VI G +A+ LF M G EP+ VS +SAC +++G+ + ++
Sbjct: 178 TVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKK 237
Query: 385 NFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELK 441
F + + +VD+ + ++ A + + MP + + W S+I A+G+ K
Sbjct: 238 GFELDEYVN--SALVDMYGKCDCLEVAREVFQKMP-RKSLVAWNSMIKGYVAKGDSK 291
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/393 (36%), Positives = 213/393 (54%), Gaps = 14/393 (3%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGV-VPNKFTYPFVLKACAGLSDLRLGKAVHGS 168
++ +I + K +G ++ ++ V + +L CA DL G+ VH
Sbjct: 274 WSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCY 333
Query: 169 VVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIG 228
VK GF DL VQNT+I Y A + F E D ++++++I
Sbjct: 334 AVKAGFILDLTVQNTIISFYAKYGSLCD-----------AFRQFSEIGLKDVISYNSLIT 382
Query: 229 GYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPK 288
G + LF EM+ G+ PD T++ VLTAC+ L AL G Y
Sbjct: 383 GCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAV 442
Query: 289 SVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMV 348
+ +CNAL+DM+ KCG +D A +F M IVSW +++ G +HG G EA+SLF+ M
Sbjct: 443 NTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQ 502
Query: 349 EQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM-EGNFGIVPKIEHYGCMVDLLSRAGF 407
E GV PD+V+ + +LSAC HS LVD+G+ FNSM G+F ++P+I+HY CM DLL+RAG+
Sbjct: 503 ETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGY 562
Query: 408 VKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNI 467
+ EA DFV MP EP+ + ++++AC +LG +SK++ T ES VLLSN
Sbjct: 563 LDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTES-LVLLSNT 621
Query: 468 YAKLRRWEQKTKVREMMDMRGMKKVPGSTMIEL 500
Y+ RWE ++R + RG+ K PG + +++
Sbjct: 622 YSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 16/255 (6%)
Query: 95 DPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACA 154
D PR + ++ +IRA+A ++ + L LY ML GV P K+TYPFVLKACA
Sbjct: 59 DEIPHPR---INPIAWDLMIRAYASNDFAEKA-LDLYYKMLNSGVRPTKYTYPFVLKACA 114
Query: 155 GLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDE 214
GL + GK +H V F D++V ++ Y +A KVFDE
Sbjct: 115 GLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFY-----------AKCGELEMAIKVFDE 163
Query: 215 SPKTDSVTWSAMIGGYARRGHSSRAVGLFREM-QVMGVCPDEITMVSVLTACADLGALEL 273
PK D V W+AMI G++ + +GLF +M ++ G+ P+ T+V + A GAL
Sbjct: 164 MPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALRE 223
Query: 274 GKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAM 333
GK + Y + + ++D++AK + A +F V+W+++I G
Sbjct: 224 GKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVE 283
Query: 334 HGRGSEAVSLFDEMV 348
+ EA +F +M+
Sbjct: 284 NEMIKEAGEVFFQML 298
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 118/237 (49%), Gaps = 23/237 (9%)
Query: 207 LAGKVFDE--SPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTA 264
LA VFDE P+ + + W MI YA + +A+ L+ +M GV P + T VL A
Sbjct: 53 LARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKA 112
Query: 265 CADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSW 324
CA L A++ GK + S++ + +C AL+D +AKCG+++ A+ +F +M +V+W
Sbjct: 113 CAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAW 172
Query: 325 TSVIVGLAMHGRGSEAVSLFDEMVE-QGVEPDDVSFIGVLSACCHSKLVDKGRS------ 377
++I G ++H ++ + LF +M G+ P+ + +G+ A + + +G++
Sbjct: 173 NAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCT 232
Query: 378 ---YFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSII 431
+ N + GI+ C++ + + D + + N++ W ++I
Sbjct: 233 RMGFSNDLVVKTGILDVYAKSKCII-------YARRVFD----LDFKKNEVTWSAMI 278
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 258 bits (660), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 235/421 (55%), Gaps = 18/421 (4%)
Query: 111 NTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVV 170
N LI ++ ++ + L++ ML GV P++ T+ +++AC L LG HG +
Sbjct: 599 NALIAGYSQNNLEEA--VVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQIT 656
Query: 171 KFGFDDD-LHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDE--SPKTDSVTWSAMI 227
K GF + ++ +++ MY A +F E SPK+ V W+ M+
Sbjct: 657 KRGFSSEGEYLGISLLGMYMNSRGMTE-----------ACALFSELSSPKS-IVLWTGMM 704
Query: 228 GGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIP 287
G+++ G A+ ++EM+ GV PD+ T V+VL C+ L +L G+ + S I
Sbjct: 705 SGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHD 764
Query: 288 KSVELCNALIDMFAKCGDVDKAMNLFRQMDS-CTIVSWTSVIVGLAMHGRGSEAVSLFDE 346
N LIDM+AKCGD+ + +F +M +VSW S+I G A +G +A+ +FD
Sbjct: 765 LDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDS 824
Query: 347 MVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAG 406
M + + PD+++F+GVL+AC H+ V GR F M G +GI +++H CMVDLL R G
Sbjct: 825 MRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWG 884
Query: 407 FVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSN 466
+++EA DF+ ++P+ +W S++ AC G+ GE +++L+ EP + S YVLLSN
Sbjct: 885 YLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSN 944
Query: 467 IYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDE 526
IYA WE+ +R++M RG+KKVPG + I++ F AGDKSH + +I +++
Sbjct: 945 IYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLED 1004
Query: 527 M 527
+
Sbjct: 1005 L 1005
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 173/396 (43%), Gaps = 46/396 (11%)
Query: 103 SSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLG 162
SS D +N +I ++ ++ + M + V + T VL A +++L LG
Sbjct: 288 SSPDVVAWNVMISGHGKRG-CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Query: 163 KAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVT 222
VH +K G +++V ++++ MY A KVF+ + + V
Sbjct: 347 LVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEA-----------AAKVFEALEEKNDVF 395
Query: 223 WSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIE 282
W+AMI GYA G S + + LF +M+ G D+ T S+L+ CA LE+G S I
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455
Query: 283 WKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVS 342
KK+ K++ + NAL+DM+AKCG ++ A +F +M V+W ++I SEA
Sbjct: 456 KKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFD 515
Query: 343 LFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLL 402
LF M G+ D L AC H + +G+ + + G+ + ++D+
Sbjct: 516 LFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ-VHCLSVKCGLDRDLHTGSSLIDMY 574
Query: 403 SRAGFVKEALDFVRTMP---------------------------------VEPNQIIWRS 429
S+ G +K+A ++P V P++I + +
Sbjct: 575 SKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFAT 634
Query: 430 IITACHARGELKLGESISKELLRNEPTHESNYVLLS 465
I+ ACH L LG ++ + + E Y+ +S
Sbjct: 635 IVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGIS 670
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 141/335 (42%), Gaps = 29/335 (8%)
Query: 159 LRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKT 218
LR+GKAVH + G D + + N ++ +Y A K FD K
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVS-----------YAEKQFDFLEK- 123
Query: 219 DSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLE 278
D W++M+ Y+ G + + F + + P++ T VL+ CA +E G+ +
Sbjct: 124 DVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIH 183
Query: 279 SYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGS 338
+ + ++ AL+DM+AKC + A +F + V WT + G G
Sbjct: 184 CSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPE 243
Query: 339 EAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCM 398
EAV +F+ M ++G PD ++F+ V++ + R F M P + + M
Sbjct: 244 EAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVM 298
Query: 399 VDLLSRAGFVKEALDF---VRTMPVEPNQIIWRSIITACHARGELKLG-----ESISKEL 450
+ + G A+++ +R V+ + S+++A L LG E+I L
Sbjct: 299 ISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGL 358
Query: 451 LRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMD 485
N S L ++Y+K + E KV E ++
Sbjct: 359 ASNIYVGSS----LVSMYSKCEKMEAAAKVFEALE 389
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 122/312 (39%), Gaps = 48/312 (15%)
Query: 128 LQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHM 187
L+ + ++ + PNKFT+ VL CA +++ G+ +H S++K G + + + ++ M
Sbjct: 145 LRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDM 204
Query: 188 YXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQ 247
Y A +VF+ ++V W+ + GY + G AV +F M+
Sbjct: 205 YAKCDRISD-----------ARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 248 VMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVD 307
G PD + V+V I+ + + G +
Sbjct: 254 DEGHRPDHLAFVTV-----------------------------------INTYIRLGKLK 278
Query: 308 KAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACC 367
A LF +M S +V+W +I G G + A+ F M + V+ + VLSA
Sbjct: 279 DARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIG 338
Query: 368 HSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIW 427
+D G ++ G+ I +V + S+ ++ A + E N + W
Sbjct: 339 IVANLDLGL-VVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE-EKNDVFW 396
Query: 428 RSIITACHARGE 439
++I GE
Sbjct: 397 NAMIRGYAHNGE 408
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 8/207 (3%)
Query: 270 ALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIV 329
AL +GK + S I L NA++D++AKC V A F ++ + +W S++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSMLS 133
Query: 330 GLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIV 389
+ G+ + + F + E + P+ +F VLS C V+ GR SM G+
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMI-KMGLE 192
Query: 390 PKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKE 449
G +VD+ ++ + +A + V+PN + W + + + + L + E
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFSG-YVKAGLPEEAVLVFE 250
Query: 450 LLRNE---PTHESNYVLLSNIYAKLRR 473
+R+E P H + +V + N Y +L +
Sbjct: 251 RMRDEGHRPDHLA-FVTVINTYIRLGK 276
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 258 bits (660), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 154/442 (34%), Positives = 246/442 (55%), Gaps = 15/442 (3%)
Query: 86 YATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFT 145
YA SD T S + +N+LI +AH + L L+R M+ + P+ FT
Sbjct: 349 YAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQA-LGLFRQMVTQRIKPDAFT 407
Query: 146 YPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXX 205
+ AC + LGK +HG V++ D+ VQN++I MY
Sbjct: 408 LASSISACENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDS--------- 457
Query: 206 XLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTAC 265
A VF++ VTW++M+ G+++ G+S A+ LF M + +E+T ++V+ AC
Sbjct: 458 --ASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQAC 515
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
+ +G+LE GKW+ + + K + ALIDM+AKCGD++ A +FR M S +IVSW+
Sbjct: 516 SSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWS 574
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
S+I MHGR A+S F++MVE G +P++V F+ VLSAC HS V++G+ YFN M+ +
Sbjct: 575 SMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMK-S 633
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGES 445
FG+ P EH+ C +DLLSR+G +KEA ++ MP + +W S++ C ++ + ++
Sbjct: 634 FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKA 693
Query: 446 ISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMC 505
I +L Y LLSNIYA+ WE+ ++R M +KKVPG + IE++ ++
Sbjct: 694 IKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVF 753
Query: 506 EFVAGDKSHDQYKQIYEMVDEM 527
F AG+++ Q +IY + +
Sbjct: 754 RFGAGEENRIQTDEIYRFLGNL 775
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 201/439 (45%), Gaps = 59/439 (13%)
Query: 106 DAFLFNTLIR--AFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSD-LRLG 162
D+F++ LI+ + H + + LY ++ +KF +P VL+ACAG + L +G
Sbjct: 64 DSFMYGVLIKCNVWCHLLDA---AIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVG 120
Query: 163 KAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVT 222
VHG ++K G DDD ++ +++ MY A KVFD P D V
Sbjct: 121 GKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSD-----------AEKVFDGMPVRDLVA 169
Query: 223 WSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIE 282
WS ++ G +A+ +F+ M GV PD +TM+SV+ CA+LG L + + + I
Sbjct: 170 WSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQIT 229
Query: 283 WKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVS 342
K LCN+L+ M++KCGD+ + +F ++ VSWT++I +A+
Sbjct: 230 RKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALR 289
Query: 343 LFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFN-----SMEGNFGIVP------- 390
F EM++ G+EP+ V+ VLS+C L+ +G+S ++ N+ +
Sbjct: 290 SFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELY 349
Query: 391 -------------------KIEHYGCMVDLLSRAGFVKEALDFVRTM---PVEPNQIIWR 428
I + ++ L + G V +AL R M ++P+
Sbjct: 350 AECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLA 409
Query: 429 SIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRG 488
S I+AC G + LG+ I ++R + + E L ++Y+K + + V + R
Sbjct: 410 SSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHR- 468
Query: 489 MKKVPGSTMIELNNEMCEF 507
+++ N+ +C F
Sbjct: 469 -------SVVTWNSMLCGF 480
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 184/377 (48%), Gaps = 44/377 (11%)
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIH 186
L++++ M+ GV P+ T V++ CA L LR+ ++VHG + + FD D + N+++
Sbjct: 186 ALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLT 245
Query: 187 MYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM 246
MY + ++F++ K ++V+W+AMI Y R S +A+ F EM
Sbjct: 246 MYSKCGDLLS-----------SERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEM 294
Query: 247 QVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKI-PKSVELCNALIDMFAKCGD 305
G+ P+ +T+ SVL++C +G + GK + + +++ P L AL++++A+CG
Sbjct: 295 IKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGK 354
Query: 306 VDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSA 365
+ + R + IV+W S+I A G +A+ LF +MV Q ++PD + +SA
Sbjct: 355 LSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISA 414
Query: 366 CCHSKLVDKGR------------------------SYFNSMEGNFGIVPKIEH-----YG 396
C ++ LV G+ S S++ + +I+H +
Sbjct: 415 CENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWN 474
Query: 397 CMVDLLSRAGFVKEAL---DFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRN 453
M+ S+ G EA+ D++ +E N++ + ++I AC + G L+ G+ + +L+ +
Sbjct: 475 SMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIIS 534
Query: 454 EPTHESNYVLLSNIYAK 470
L ++YAK
Sbjct: 535 GLKDLFTDTALIDMYAK 551
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 134/394 (34%), Positives = 226/394 (57%), Gaps = 14/394 (3%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVV-PNKFTYPFVLKACAGLSDLRLGKA 164
+ F +N +I F+ + + S + L+ M R V P+ FT P +L+AC+ + + G
Sbjct: 97 NIFSWNIIIGEFSRSGFASKS-IDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDL 155
Query: 165 VHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWS 224
+H +K GF L V + ++ MY A K+FD+ P DSV ++
Sbjct: 156 IHVLCLKLGFSSSLFVSSALVIMYVDMGKLLH-----------ARKLFDDMPVRDSVLYT 204
Query: 225 AMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWK 284
AM GGY ++G + + +FREM G D + MVS+L AC LGAL+ GK + + +
Sbjct: 205 AMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRR 264
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLF 344
+ L NA+ DM+ KC +D A +F M ++SW+S+I+G + G + LF
Sbjct: 265 CSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLF 324
Query: 345 DEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSR 404
DEM+++G+EP+ V+F+GVLSAC H LV+K YF M+ + IVP+++HY + D +SR
Sbjct: 325 DEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQ-EYNIVPELKHYASVADCMSR 383
Query: 405 AGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLL 464
AG ++EA F+ MPV+P++ + ++++ C G +++GE +++EL++ +P S YV L
Sbjct: 384 AGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTL 443
Query: 465 SNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMI 498
+ +Y+ R+++ +R+ M + + KVPG + I
Sbjct: 444 AGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 1/168 (0%)
Query: 211 VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM-QVMGVCPDEITMVSVLTACADLG 269
VF P + +W+ +IG ++R G +S+++ LF M + V PD+ T+ +L AC+
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 148
Query: 270 ALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIV 329
+ G + S+ + +AL+ M+ G + A LF M V +T++
Sbjct: 149 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFG 208
Query: 330 GLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRS 377
G G +++F EM G D V + +L AC + G+S
Sbjct: 209 GYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKS 256
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 166/429 (38%), Positives = 235/429 (54%), Gaps = 54/429 (12%)
Query: 100 PRASSFDAFLFNTL---------IRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVL 150
PR D FLFNTL IR FA+ SKSS L L N+ T+ FVL
Sbjct: 68 PRFGHPDKFLFNTLLKCSKPEDSIRIFANYA-SKSSLLYL-----------NERTFVFVL 115
Query: 151 ---KACAGLSDLRLGKAVHGSVVKFGF--DDDLHVQNTMIHMYXXXXXXXXXXXXXXXXX 205
A S LR+G+ VHG V K GF + +L + T++H Y
Sbjct: 116 GACARSASSSALRVGRIVHGMVKKLGFLYESEL-IGTTLLHFYAKNGDLRY--------- 165
Query: 206 XLAGKVFDESPKTDSVTWSAMIGGYA----RRGHSSR-AVGLFREMQVMG--VCPDEITM 258
A KVFDE P+ SVTW+AMIGGY + H++R A+ LFR G V P + TM
Sbjct: 166 --ARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTM 223
Query: 259 VSVLTACADLGALELGKWLESYIEWKKIPKSVE--LCNALIDMFAKCGDVDKAMNLFRQM 316
V VL+A + G LE+G + YIE V+ + AL+DM++KCG ++ A ++F M
Sbjct: 224 VCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELM 283
Query: 317 DSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGR 376
+ +WTS+ GLA++GRG+E +L + M E G++P++++F +LSA H LV++G
Sbjct: 284 KVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGI 343
Query: 377 SYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHA 436
F SM+ FG+ P IEHYGC+VDLL +AG ++EA F+ MP++P+ I+ RS+ AC
Sbjct: 344 ELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSI 403
Query: 437 RGELKLGESISKELLRNEPTHE-------SNYVLLSNIYAKLRRWEQKTKVREMMDMRGM 489
GE +GE I K LL E E +YV LSN+ A +W + K+R+ M R +
Sbjct: 404 YGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRI 463
Query: 490 KKVPGSTMI 498
K PG + +
Sbjct: 464 KTRPGYSFV 472
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 255 bits (651), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 135/418 (32%), Positives = 228/418 (54%), Gaps = 11/418 (2%)
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIH 186
GL+L+ M R V PN TY L AC+G + G+ +H + K+G + +L +++ ++
Sbjct: 240 GLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMD 299
Query: 187 MYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM 246
MY A +F+ + + D V+ + ++ G A+ G A+ F M
Sbjct: 300 MYSKCGSIED-----------AWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRM 348
Query: 247 QVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDV 306
GV D + +VL +L LGK L S + +K + + N LI+M++KCGD+
Sbjct: 349 LQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDL 408
Query: 307 DKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSAC 366
+ +FR+M VSW S+I A HG G A+ L++EM V+P DV+F+ +L AC
Sbjct: 409 TDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHAC 468
Query: 367 CHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQII 426
H L+DKGR N M+ GI P+ EHY C++D+L RAG +KEA F+ ++P++P+ I
Sbjct: 469 SHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKI 528
Query: 427 WRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDM 486
W++++ AC G+ ++GE +++L + P S ++L++NIY+ +W+++ K + M
Sbjct: 529 WQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKA 588
Query: 487 RGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVL 544
G+ K G + IE+ ++ FV DK H Q + IY+++ + + GY P +L
Sbjct: 589 MGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKRFIL 646
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 153/344 (44%), Gaps = 38/344 (11%)
Query: 126 SGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMI 185
SG L + ML G + T VL C + K +H + G+D ++ V N +I
Sbjct: 139 SGFVLLKRMLGSGGFDHA-TLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLI 197
Query: 186 HMYXXXXXXXXXXXXXXXXXXLAGK-VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFR 244
Y ++G+ VFD + +T +A+I G + LF
Sbjct: 198 TSYFKCGCS------------VSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFS 245
Query: 245 EMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELC--NALIDMFAK 302
M+ V P+ +T +S L AC+ + G+ + + + WK +S ELC +AL+DM++K
Sbjct: 246 LMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALL-WKYGIES-ELCIESALMDMYSK 303
Query: 303 CGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGV 362
CG ++ A +F VS T ++VGLA +G EA+ F M++ GVE D V
Sbjct: 304 CGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEID----ANV 359
Query: 363 LSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYG------CMVDLLSRAGFVKEALDFVR 416
+SA +D + +V K + G ++++ S+ G + ++ R
Sbjct: 360 VSAVLGVSFIDNSLGLGKQLH---SLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFR 416
Query: 417 TMPVEPNQIIWRSIITA----CHARGELKLGESISKELLRNEPT 456
MP + N + W S+I A H LKL E ++ L +PT
Sbjct: 417 RMP-KRNYVSWNSMIAAFARHGHGLAALKLYEEMTT--LEVKPT 457
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 114/261 (43%), Gaps = 23/261 (8%)
Query: 161 LGKAVHGSVVKFG-----FDDDLH-----VQNTMIHMYXXXXXXXXXXXXXXXXXXLAGK 210
LG +H S++K D D+H V N+++ +Y A K
Sbjct: 63 LGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVD-----------AIK 111
Query: 211 VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGA 270
+FDE P D ++ + + G+ R + L + M G D T+ VL+ C
Sbjct: 112 LFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGF-DHATLTIVLSVCDTPEF 170
Query: 271 LELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVG 330
+ K + + K + + N LI + KCG +F M +++ T+VI G
Sbjct: 171 CLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISG 230
Query: 331 LAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVP 390
L + + + LF M V P+ V+++ L+AC S+ + +G+ +++ +GI
Sbjct: 231 LIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQ-IHALLWKYGIES 289
Query: 391 KIEHYGCMVDLLSRAGFVKEA 411
++ ++D+ S+ G +++A
Sbjct: 290 ELCIESALMDMYSKCGSIEDA 310
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 252/451 (55%), Gaps = 20/451 (4%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +NT+I AF GL L M + G + T +L A + L + +GK
Sbjct: 383 DVVSWNTMISAFVQNGLD-DEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQT 441
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDES--PKTDSVTW 223
H +++ G + + + +I MY ++ K+F+ S + D TW
Sbjct: 442 HAFLIRQGIQFE-GMNSYLIDMYSKSGLIR-----------ISQKLFEGSGYAERDQATW 489
Query: 224 SAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEW 283
++MI GY + GH+ + +FR+M + P+ +T+ S+L AC+ +G+++LGK L +
Sbjct: 490 NSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIR 549
Query: 284 KKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSL 343
+ + ++V + +AL+DM++K G + A ++F Q V++T++I+G HG G A+SL
Sbjct: 550 QYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISL 609
Query: 344 FDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLS 403
F M E G++PD ++F+ VLSAC +S L+D+G F M + I P EHY C+ D+L
Sbjct: 610 FLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLG 669
Query: 404 RAGFVKEALDFVRTMPVEPNQI-IWRSIITACHARGELKLGESISKELLR-NEPTHESNY 461
R G V EA +FV+ + E N +W S++ +C GEL+L E++S+ L + ++ + S Y
Sbjct: 670 RVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGY 729
Query: 462 -VLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQI 520
VLLSN+YA+ ++W+ KVR M +G+KK G + IE+ + FV+ D+ H +I
Sbjct: 730 EVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEI 789
Query: 521 YEMVDEMGREIKRAGYVPTTSQVL--LDIDE 549
Y+++D + ++++ ++ T V L++DE
Sbjct: 790 YDVIDGLAKDMRGDSFLTTLPTVTPSLELDE 820
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 157/338 (46%), Gaps = 28/338 (8%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+NTLI + T ++ + Q + M+R V P+ ++ V A + ++ +G +
Sbjct: 182 WNTLISWYVKTGRNAEACRQ-FGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLM 240
Query: 170 VKFG--FDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMI 227
+K G + DL V ++ I MY + +VFD + + W+ MI
Sbjct: 241 LKLGDEYVKDLFVVSSAISMYAELGDIES-----------SRRVFDSCVERNIEVWNTMI 289
Query: 228 GGYARRGHSSRAVGLFRE-MQVMGVCPDEITMVSVLTACADLGALELGKWLESYI--EWK 284
G Y + ++ LF E + + DE+T + +A + L +ELG+ ++ ++
Sbjct: 290 GVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFR 349
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLF 344
++P + + N+L+ M+++CG V K+ +F M +VSW ++I +G E + L
Sbjct: 350 ELP--IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLV 407
Query: 345 DEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGC---MVDL 401
EM +QG + D ++ +LSA + + + G+ F I I+ G ++D+
Sbjct: 408 YEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTH-----AFLIRQGIQFEGMNSYLIDM 462
Query: 402 LSRAGFVKEALD-FVRTMPVEPNQIIWRSIITACHARG 438
S++G ++ + F + E +Q W S+I+ G
Sbjct: 463 YSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNG 500
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 158/351 (45%), Gaps = 41/351 (11%)
Query: 105 FDAF------LFNTLIRAFA--HTPQSKSSGLQLYRTMLRYGVVPN--KFTYPFVLKACA 154
FDA L+NT+I F + P L Y M + N +TY LKACA
Sbjct: 62 FDAIPKPTTVLWNTIIIGFICNNLPHE---ALLFYSRMKKTAPFTNCDAYTYSSTLKACA 118
Query: 155 GLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDE 214
+L+ GKAVH +++ + V N++++MY + KVFD
Sbjct: 119 ETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMY-----VSCLNAPDCFEYDVVRKVFDN 173
Query: 215 SPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALE-- 272
+ + V W+ +I Y + G ++ A F M M V P ++ V+V A + +++
Sbjct: 174 MRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKA 233
Query: 273 ------LGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSC---TIVS 323
+ K + Y+ K + + ++ I M+A+ GD++ + +F DSC I
Sbjct: 234 NVFYGLMLKLGDEYV------KDLFVVSSAISMYAELGDIESSRRVF---DSCVERNIEV 284
Query: 324 WTSVIVGLAMHGRGSEAVSLFDEMV-EQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM 382
W ++I + E++ LF E + + + D+V+++ SA + V+ GR + +
Sbjct: 285 WNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFV 344
Query: 383 EGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITA 433
NF +P + MV + SR G V ++ +M E + + W ++I+A
Sbjct: 345 SKNFRELPIVIVNSLMV-MYSRCGSVHKSFGVFLSMR-ERDVVSWNTMISA 393
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 123/291 (42%), Gaps = 34/291 (11%)
Query: 207 LAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMG--VCPDEITMVSVLTA 264
LA ++FD PK +V W+ +I G+ A+ + M+ D T S L A
Sbjct: 57 LARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKA 116
Query: 265 CADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDV------DKAMNLFRQMDS 318
CA+ L+ GK + ++ S + N+L++M+ C + D +F M
Sbjct: 117 CAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRR 176
Query: 319 CTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSY 378
+V+W ++I GR +EA F M+ V+P VSF+ V A S+ + K +
Sbjct: 177 KNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVF 236
Query: 379 FNSM--------EGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSI 430
+ M + F + I Y + D+ E+ V VE N +W ++
Sbjct: 237 YGLMLKLGDEYVKDLFVVSSAISMYAELGDI--------ESSRRVFDSCVERNIEVWNTM 288
Query: 431 ITA-----CHARG-ELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWE 475
I C EL L SKE++ +E T Y+L ++ + L++ E
Sbjct: 289 IGVYVQNDCLVESIELFLEAIGSKEIVSDEVT----YLLAASAVSALQQVE 335
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 145/388 (37%), Positives = 216/388 (55%), Gaps = 24/388 (6%)
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIH 186
L Y MLR G+ P++ +L A A G +HG++VK GFD +Q T+IH
Sbjct: 289 ALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIH 348
Query: 187 MYXXXXXXXXXXXX---------XXXXXXLAG-----------KVFDESPKTDSVTWSAM 226
Y +AG +VFD++ D +W+AM
Sbjct: 349 FYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAM 408
Query: 227 IGGYARRGHSSRAVGLFREM-QVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
I GYA+ A+ LFREM V PD ITMVSV +A + LG+LE GK Y+ +
Sbjct: 409 ISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFST 468
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQ---MDSCTIVSWTSVIVGLAMHGRGSEAVS 342
IP + L A+IDM+AKCG ++ A+N+F Q + S TI W ++I G A HG A+
Sbjct: 469 IPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALD 528
Query: 343 LFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLL 402
L+ ++ ++P+ ++F+GVLSACCH+ LV+ G++YF SM+ + GI P I+HYGCMVDLL
Sbjct: 529 LYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLL 588
Query: 403 SRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYV 462
+AG ++EA + ++ MPV+ + +IW +++A G +++ E + EL +P+H V
Sbjct: 589 GKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKV 648
Query: 463 LLSNIYAKLRRWEQKTKVREMMDMRGMK 490
+LSN+YA RWE VRE M R ++
Sbjct: 649 MLSNVYADAGRWEDVALVREEMRTRDVE 676
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 169/407 (41%), Gaps = 80/407 (19%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+ TLI+ +A Q S ++L+R M G++ N+ T V+ AC+ L + + +
Sbjct: 141 YTTLIKGYAQNNQ-WSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLA 199
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
+K + + V ++HMY A K+FDE P+ + VTW+ M+ G
Sbjct: 200 IKLKLEGRVFVSTNLLHMYCLCLCLKD-----------ARKLFDEMPERNLVTWNVMLNG 248
Query: 230 YARRGHSSRAVGLF-------------------------------REMQVMGVCPDEITM 258
Y++ G +A LF EM G+ P E+ M
Sbjct: 249 YSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMM 308
Query: 259 VSVLTACA---------DLGALELGKWLESY-------IEWKKIPKSVELC--------- 293
V +L+A A L + + + Y I + + ++L
Sbjct: 309 VDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVK 368
Query: 294 ------NALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEM 347
NALI F K G V++A +F Q I SW ++I G A A+ LF EM
Sbjct: 369 DHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREM 428
Query: 348 VEQG-VEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHY-GCMVDLLSRA 405
+ V+PD ++ + V SA +++G+ + + NF +P ++ ++D+ ++
Sbjct: 429 ISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL--NFSTIPPNDNLTAAIIDMYAKC 486
Query: 406 GFVKEALD-FVRTMPVEPNQII-WRSIITACHARGELKLGESISKEL 450
G ++ AL+ F +T + + I W +II G KL + +L
Sbjct: 487 GSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDL 533
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 130/274 (47%), Gaps = 28/274 (10%)
Query: 150 LKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXL-- 207
L +CA +D+ G+ +H V+K G D + ++ N++++MY L
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 208 ------------------AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVM 249
A K+FD P+ V+++ +I GYA+ S A+ LFREM+ +
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL 167
Query: 250 GVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKA 309
G+ +E+T+ +V++AC+ LG + + L+S K+ V + L+ M+ C + A
Sbjct: 168 GIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDA 227
Query: 310 MNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHS 369
LF +M +V+W ++ G + G +A LFD++ E+ D VS+ ++ C
Sbjct: 228 RKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEK----DIVSWGTMIDGCLRK 283
Query: 370 KLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLS 403
+D+ Y+ M G+ P MVDLLS
Sbjct: 284 NQLDEALVYYTEML-RCGMKPS---EVMMVDLLS 313
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 99/232 (42%), Gaps = 43/232 (18%)
Query: 255 EITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFR 314
E +VS L +CA + G+ + + + + +CN++++M+AKC + A ++FR
Sbjct: 41 ERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFR 100
Query: 315 ---QMDSCTI----------------------------VSWTSVIVGLAMHGRGSEAVSL 343
++DS + VS+T++I G A + + SEA+ L
Sbjct: 101 DHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMEL 160
Query: 344 FDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFN-----SMEGNFGIVPKIEHYGCM 398
F EM G+ ++V+ V+SAC H + R + +EG + + H C+
Sbjct: 161 FREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCL 220
Query: 399 VDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKEL 450
L K+A MP E N + W ++ G ++ E + ++
Sbjct: 221 CLCL------KDARKLFDEMP-ERNLVTWNVMLNGYSKAGLIEQAEELFDQI 265
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 143/403 (35%), Positives = 218/403 (54%), Gaps = 16/403 (3%)
Query: 150 LKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAG 209
LKAC+ + +RLGK +HG + +D +V+NT+I MY A
Sbjct: 287 LKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRH-----------AL 335
Query: 210 KVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLG 269
VF ++ + TW+++I GYA+ S A L REM V G P+ IT+ S+L CA +
Sbjct: 336 IVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIA 395
Query: 270 ALELGKWLESYIEWKKIPKSVE-LCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVI 328
L+ GK YI +K K L N+L+D++AK G + A + M V++TS+I
Sbjct: 396 NLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLI 455
Query: 329 VGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGI 388
G G G A++LF EM G++PD V+ + VLSAC HSKLV +G F M+ +GI
Sbjct: 456 DGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGI 515
Query: 389 VPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISK 448
P ++H+ CMVDL RAGF+ +A D + MP +P+ W +++ ACH G ++G+ ++
Sbjct: 516 RPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAE 575
Query: 449 ELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFV 508
+LL +P + YVL++N+YA W + +VR +M G+KK PG I+ ++ F
Sbjct: 576 KLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFS 635
Query: 509 AGDKSHDQYKQIYEMVDEMGREIK-RAGYVPTTSQVLLDIDEE 550
GD S + Y ++D + + +K AGY Q DEE
Sbjct: 636 VGDTSSPEACNTYPLLDGLNQLMKDNAGYAINKVQ---SSDEE 675
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 190/440 (43%), Gaps = 58/440 (13%)
Query: 63 GLINNPLVLTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQ 122
G+ + +++ K S FN + A S + + D +N LI ++A
Sbjct: 73 GVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDI--------LHPLPWNVLIASYAKNEL 124
Query: 123 SKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQN 182
+ + Y+ M+ G+ P+ FTYP VLKAC D+ G+ VHGS+ + L+V N
Sbjct: 125 FEEV-IAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCN 183
Query: 183 TMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGL 242
+I MY +A ++FD + D+V+W+A+I YA G S A L
Sbjct: 184 ALISMYKRFRNMG-----------IARRLFDRMFERDAVSWNAVINCYASEGMWSEAFEL 232
Query: 243 FREMQVMGV-----------------------------------CPDEITMVSVLTACAD 267
F +M GV D + M+ L AC+
Sbjct: 233 FDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSL 292
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSV 327
+GA+ LGK + + N LI M++KC D+ A+ +FRQ + ++ +W S+
Sbjct: 293 IGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSI 352
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG 387
I G A + EA L EM+ G +P+ ++ +L C + G+ + +
Sbjct: 353 ISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKC 412
Query: 388 IVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESIS 447
+ +VD+ +++G + A V + + +++ + S+I +GE + ++
Sbjct: 413 FKDYTMLWNSLVDVYAKSGKIVAAKQ-VSDLMSKRDEVTYTSLIDGYGNQGEGGVALALF 471
Query: 448 KELLRN--EPTHESNYVLLS 465
KE+ R+ +P H + +LS
Sbjct: 472 KEMTRSGIKPDHVTVVAVLS 491
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 115/229 (50%), Gaps = 15/229 (6%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+N++I +A +S+ + L R ML G PN T +L CA +++L+ GK H +
Sbjct: 349 WNSIISGYAQLNKSEEAS-HLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYI 407
Query: 170 VKFG-FDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIG 228
++ F D + N+++ +Y A +V D K D VT++++I
Sbjct: 408 LRRKCFKDYTMLWNSLVDVYAKSGKIVA-----------AKQVSDLMSKRDEVTYTSLID 456
Query: 229 GYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWK-KIP 287
GY +G A+ LF+EM G+ PD +T+V+VL+AC+ + G+ L ++ + I
Sbjct: 457 GYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIR 516
Query: 288 KSVELCNALIDMFAKCGDVDKAMNLFRQMD-SCTIVSWTSVIVGLAMHG 335
++ + ++D++ + G + KA ++ M + +W +++ +HG
Sbjct: 517 PCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHG 565
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/433 (32%), Positives = 245/433 (56%), Gaps = 33/433 (7%)
Query: 103 SSFDAFL--FNTLIRAFAHTPQSKSSGLQLYRTML----RYGVVP---NKFTYPFVLKAC 153
+ FD+FL F+T HT + + + +L R+ P + F+ F +K
Sbjct: 15 NKFDSFLLHFHTKSLKSNHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVS 74
Query: 154 AGLSDLRL-GKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVF 212
+ L G+ +H V K GF+ + +Q +++ Y A +VF
Sbjct: 75 SAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVD-----------YARQVF 123
Query: 213 DESP-KTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGAL 271
DE+P K + V W+AMI Y +S A+ LF+ M+ + D + + L+ACADLGA+
Sbjct: 124 DETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAV 183
Query: 272 ELGK--WLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIV 329
++G+ + S +++ + L N+L++M+ K G+ +KA LF + + ++TS+I
Sbjct: 184 QMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIF 243
Query: 330 GLAMHGRGSEAVSLFDEM--VEQG----VEPDDVSFIGVLSACCHSKLVDKGRSYFNSME 383
G A++G+ E++ LF +M ++Q + P+DV+FIGVL AC HS LV++G+ +F SM
Sbjct: 244 GYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMI 303
Query: 384 GNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLG 443
++ + P+ H+GCMVDL R+G +K+A +F+ MP++PN +IWR+++ AC G ++LG
Sbjct: 304 MDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELG 363
Query: 444 ESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNE 503
E + + + + H +YV LSNIYA W++K+K+R+ + R M PG + IEL +
Sbjct: 364 EEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKRRM---PGKSWIELGSI 420
Query: 504 MCEFVAGDKSHDQ 516
+ EFV+G ++D+
Sbjct: 421 INEFVSGPDNNDE 433
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 140/420 (33%), Positives = 231/420 (55%), Gaps = 12/420 (2%)
Query: 213 DESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALE 272
D + ++ TW+ +I GY + G A+ LFR+MQ P+ +T++S+L ACA+L +
Sbjct: 482 DGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAK 541
Query: 273 LGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLA 332
+ + + + + + + NAL D +AK GD++ + +F M++ I++W S+I G
Sbjct: 542 MVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYV 601
Query: 333 MHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKI 392
+HG A++LF++M QG+ P+ + ++ A VD+G+ F S+ ++ I+P +
Sbjct: 602 LHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPAL 661
Query: 393 EHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLR 452
EH MV L RA ++EAL F++ M ++ IW S +T C G++ + ++ L
Sbjct: 662 EHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFS 721
Query: 453 NEPTHESNYVLLSNIY---AKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVA 509
EP + + ++S IY AKL R + K R +KK G + IE+ N + F
Sbjct: 722 LEPENTATESIVSQIYALGAKLGRSLEGNKPRR---DNLLKKPLGQSWIEVRNLIHTFTT 778
Query: 510 GDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFAL 569
GD+S +Y +V++M R R+ L I+EE +E+ HSEK A+AF L
Sbjct: 779 GDQSKLCTDVLYPLVEKMSRLDNRSDQYNGE----LWIEEEGREETCGIHSEKFAMAFGL 834
Query: 570 LNTPPG--TPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
+++ T IRI+KNLR+C DCH K++SK Y +I++ D HHFKNG CSC D+W
Sbjct: 835 ISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 144/307 (46%), Gaps = 20/307 (6%)
Query: 133 TMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGF--DDDLHVQNTMIHMYXX 190
++ + G + TY +L++C + LG+ +H +FG + D+ V+ ++ MY
Sbjct: 71 SLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAK 127
Query: 191 XXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMG 250
A KVFD + + TWSAMIG Y+R LFR M G
Sbjct: 128 CGCIAD-----------ARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDG 176
Query: 251 VCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAM 310
V PD+ +L CA+ G +E GK + S + + + + N+++ ++AKCG++D A
Sbjct: 177 VLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFAT 236
Query: 311 NLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSK 370
FR+M +++W SV++ +G+ EAV L EM ++G+ P V++ ++
Sbjct: 237 KFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLG 296
Query: 371 LVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTM---PVEPNQIIW 427
D ME FGI + + M+ L G +ALD R M V PN +
Sbjct: 297 KCDAAMDLMQKME-TFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTI 355
Query: 428 RSIITAC 434
S ++AC
Sbjct: 356 MSAVSAC 362
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 156/339 (46%), Gaps = 60/339 (17%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
+ F ++ +I A++ + + +L+R M++ GV+P+ F +P +L+ CA D+ GK +
Sbjct: 145 NLFTWSAMIGAYSRENRWREVA-KLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVI 203
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H V+K G L V N+++ +Y A K F + D + W++
Sbjct: 204 HSVVIKLGMSSCLRVSNSILAVY-----------AKCGELDFATKFFRRMRERDVIAWNS 252
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
++ Y + G AV L +EM+ G+ P +T W
Sbjct: 253 VLLAYCQNGKHEEAVELVKEMEKEGISPGLVT------------------W--------- 285
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIV----SWTSVIVGLAMHGRGSEAV 341
N LI + + G D AM+L ++M++ I +WT++I GL +G +A+
Sbjct: 286 --------NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQAL 337
Query: 342 SLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDL 401
+F +M GV P+ V+ + +SAC K++++G S +S+ G + + +VD+
Sbjct: 338 DMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQG-SEVHSIAVKMGFIDDVLVGNSLVDM 396
Query: 402 LSRAGFVKEA---LDFVRTMPVEPNQIIWRSIITA-CHA 436
S+ G +++A D V+ V W S+IT C A
Sbjct: 397 YSKCGKLEDARKVFDSVKNKDV----YTWNSMITGYCQA 431
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 3/219 (1%)
Query: 219 DSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLE 278
D TW+AMI G G +A+ +FR+M + GV P+ +T++S ++AC+ L + G +
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375
Query: 279 SYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGS 338
S V + N+L+DM++KCG ++ A +F + + + +W S+I G G
Sbjct: 376 SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCG 435
Query: 339 EAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCM 398
+A LF M + + P+ +++ ++S + + F ME + + + +
Sbjct: 436 KAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLI 495
Query: 399 VDLLSRAGFVKEALDFVRTMPVE---PNQIIWRSIITAC 434
+ + G EAL+ R M PN + S++ AC
Sbjct: 496 IAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 130/279 (46%), Gaps = 23/279 (8%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+N +I + + K L+L+R M +PN T +L ACA L ++ + +HG V
Sbjct: 492 WNLIIAGYIQNGK-KDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCV 550
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
++ D V+N + Y + +F D +TW+++IGG
Sbjct: 551 LRRNLDAIHAVKNALTDTY-----------AKSGDIEYSRTIFLGMETKDIITWNSLIGG 599
Query: 230 YARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYI--EWKKIP 287
Y G A+ LF +M+ G+ P+ T+ S++ A +G ++ GK + I ++ IP
Sbjct: 600 YVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIP 659
Query: 288 KSVELCNALIDMFAKCGDVDKAMNLFRQMD-SCTIVSWTSVIVGLAMHGRGSEAVSLFDE 346
++E C+A++ ++ + +++A+ ++M+ W S + G +HG A+ +
Sbjct: 660 -ALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAEN 718
Query: 347 MVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
+ +EP++ + ++ S++ G S+EGN
Sbjct: 719 LFS--LEPENTATESIV-----SQIYALGAKLGRSLEGN 750
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 212/387 (54%), Gaps = 11/387 (2%)
Query: 141 PNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXX 200
P+ V ACAGL LR G VHGS++K G ++ V +++I +Y
Sbjct: 474 PDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPE----- 528
Query: 201 XXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVS 260
+A KVF + V W++MI Y+R ++ LF M G+ PD +++ S
Sbjct: 529 ------MALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITS 582
Query: 261 VLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCT 320
VL A + +L GK L Y IP L NALIDM+ KCG A N+F++M +
Sbjct: 583 VLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKS 642
Query: 321 IVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFN 380
+++W +I G HG A+SLFDEM + G PDDV+F+ ++SAC HS V++G++ F
Sbjct: 643 LITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFE 702
Query: 381 SMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGEL 440
M+ ++GI P +EHY MVDLL RAG ++EA F++ MP+E + IW +++A +
Sbjct: 703 FMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNV 762
Query: 441 KLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIEL 500
+LG +++LLR EP S YV L N+Y + + K+ +M +G+ K PG + IE+
Sbjct: 763 ELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEV 822
Query: 501 NNEMCEFVAGDKSHDQYKQIYEMVDEM 527
++ F +G S +I+ +++ +
Sbjct: 823 SDRTNVFFSGGSSSPMKAEIFNVLNRL 849
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 156/337 (46%), Gaps = 17/337 (5%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
+ L+N +I F + +SS L LY V ++ L AC+ + G+ +
Sbjct: 236 NVVLWNVMIVGFGGSGICESS-LDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQI 294
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H VVK G +D +V +++ MY A VF W+A
Sbjct: 295 HCDVVKMGLHNDPYVCTSLLSMYSKCGMVGE-----------AETVFSCVVDKRLEIWNA 343
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
M+ YA + A+ LF M+ V PD T+ +V++ C+ LG GK + + + +
Sbjct: 344 MVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRP 403
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
I + + +AL+ +++KCG A +F+ M+ +V+W S+I GL +G+ EA+ +F
Sbjct: 404 IQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFG 463
Query: 346 EMV--EQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLS 403
+M + ++PD V +AC + + G SM G+V + ++DL S
Sbjct: 464 DMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLYS 522
Query: 404 RAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGEL 440
+ G + AL +M E N + W S+I+ C++R L
Sbjct: 523 KCGLPEMALKVFTSMSTE-NMVAWNSMIS-CYSRNNL 557
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 156/344 (45%), Gaps = 16/344 (4%)
Query: 109 LFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGS 168
++N ++ A+A S+ L L+ M + V+P+ FT V+ C+ L GK+VH
Sbjct: 340 IWNAMVAAYAENDYGYSA-LDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAE 398
Query: 169 VVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIG 228
+ K +++ ++ +Y A VF + D V W ++I
Sbjct: 399 LFKRPIQSTSTIESALLTLYSKCGCDPD-----------AYLVFKSMEEKDMVAWGSLIS 447
Query: 229 GYARRGHSSRAVGLFREMQVM--GVCPDEITMVSVLTACADLGALELGKWLESYIEWKKI 286
G + G A+ +F +M+ + PD M SV ACA L AL G + + +
Sbjct: 448 GLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGL 507
Query: 287 PKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDE 346
+V + ++LID+++KCG + A+ +F M + +V+W S+I + + ++ LF+
Sbjct: 508 VLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNL 567
Query: 347 MVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAG 406
M+ QG+ PD VS VL A + + KG+S + GI ++D+ + G
Sbjct: 568 MLSQGIFPDSVSITSVLVAISSTASLLKGKS-LHGYTLRLGIPSDTHLKNALIDMYVKCG 626
Query: 407 FVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKEL 450
F K A + + M + I W +I + G+ S+ E+
Sbjct: 627 FSKYAENIFKKMQ-HKSLITWNLMIYGYGSHGDCITALSLFDEM 669
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 155/372 (41%), Gaps = 57/372 (15%)
Query: 144 FTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXX 203
FT+P +LKAC+ L++L GK +HGSVV G+ D + ++++MY
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDY------- 113
Query: 204 XXXLAGKVFDESPKT-------DSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEI 256
A +VFD ++ D W++MI GY + VG FR M V GV PD
Sbjct: 114 ----AVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAF 169
Query: 257 TMVSVLTACADLGAL--ELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFR 314
++ V++ G E GK + ++ + L ALIDM+ K G A +F
Sbjct: 170 SLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFV 229
Query: 315 QM-DSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVD 373
++ D +V W +IVG G ++ L+ V+ SF G L AC S+
Sbjct: 230 EIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSG 289
Query: 374 KGR------------------SYFNSMEGNFGIV------------PKIEHYGCMVDLLS 403
GR + SM G+V ++E + MV +
Sbjct: 290 FGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYA 349
Query: 404 RAGFVKEALD---FVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESN 460
+ ALD F+R V P+ ++I+ C G G+S+ EL + P ++
Sbjct: 350 ENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFK-RPIQSTS 408
Query: 461 YV--LLSNIYAK 470
+ L +Y+K
Sbjct: 409 TIESALLTLYSK 420
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 158/379 (41%), Gaps = 20/379 (5%)
Query: 67 NPLVLTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSS 126
+P + T + YA +F + S+ D ++N++I + + K
Sbjct: 94 DPFIATSLVNMYVKCGFLDYAVQ-VFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKE- 151
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRL--GKAVHGSVVKFGFDDDLHVQNTM 184
G+ +R ML +GV P+ F+ V+ + R GK +HG +++ D D ++ +
Sbjct: 152 GVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTAL 211
Query: 185 IHMYXXXXXXXXXXXXXXXXXXLAGKVFDE-SPKTDSVTWSAMIGGYARRGHSSRAVGLF 243
I MY A +VF E K++ V W+ MI G+ G ++ L+
Sbjct: 212 IDMYFKFGLSID-----------AWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY 260
Query: 244 REMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKC 303
+ V + L AC+ G+ + + + +C +L+ M++KC
Sbjct: 261 MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKC 320
Query: 304 GDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVL 363
G V +A +F + + W +++ A + G A+ LF M ++ V PD + V+
Sbjct: 321 GMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVI 380
Query: 364 SACCHSKLVDKGRSYFNSM-EGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEP 422
S C L + G+S + + IE ++ L S+ G +A ++M E
Sbjct: 381 SCCSVLGLYNYGKSVHAELFKRPIQSTSTIE--SALLTLYSKCGCDPDAYLVFKSME-EK 437
Query: 423 NQIIWRSIITACHARGELK 441
+ + W S+I+ G+ K
Sbjct: 438 DMVAWGSLISGLCKNGKFK 456
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 141/451 (31%), Positives = 232/451 (51%), Gaps = 26/451 (5%)
Query: 107 AFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKAC-AGLSDLRLGKAV 165
AF +N +I AH + +S L L++ ML P+ +T+ ++ AC A S++ G+ V
Sbjct: 169 AFAWNIMISGHAHCGKLESC-LSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMV 227
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXL------------------ 207
H ++K G+ + +N+++ Y L
Sbjct: 228 HAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGET 287
Query: 208 --AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTAC 265
A +VF +P+ + VTW+ MI GY R G +A+ F EM GV D +VL AC
Sbjct: 288 EKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHAC 347
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
+ L L GK + + + NAL++++AKCGD+ +A F + + +VSW
Sbjct: 348 SGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWN 407
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
+++ +HG +A+ L+D M+ G++PD+V+FIG+L+ C HS LV++G F SM +
Sbjct: 408 TMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKD 467
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPV----EPNQIIWRSIITACHARGELK 441
+ I +++H CM+D+ R G + EA D T N W +++ AC +
Sbjct: 468 YRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTE 527
Query: 442 LGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELN 501
LG +SK L EP+ E ++VLLSN+Y RW++ VR M RGMKK PG + IE+
Sbjct: 528 LGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVG 587
Query: 502 NEMCEFVAGDKSHDQYKQIYEMVDEMGREIK 532
N++ FV GD SH + +++ E ++ + E++
Sbjct: 588 NQVSTFVVGDSSHPRLEELSETLNCLQHEMR 618
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 124/266 (46%), Gaps = 36/266 (13%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A +VFD P+ D+V W+ M+ Y+R G A+ LF +++ PD+ + ++L+ CA
Sbjct: 23 ARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCAS 82
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM--DSCTIVSWT 325
LG ++ G+ ++S + S+ + N+LIDM+ KC D A +FR M DS V+W
Sbjct: 83 LGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWC 142
Query: 326 SV-------------------------------IVGLAMHGRGSEAVSLFDEMVEQGVEP 354
S+ I G A G+ +SLF EM+E +P
Sbjct: 143 SLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKP 202
Query: 355 DDVSFIGVLSAC-CHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALD 413
D +F +++AC S V GR M N G +E ++ ++ G +A+
Sbjct: 203 DCYTFSSLMNACSADSSNVVYGRMVHAVMLKN-GWSSAVEAKNSVLSFYTKLGSRDDAMR 261
Query: 414 FVRTMPVEPNQIIWRSIITACHARGE 439
+ ++ V Q+ W SII AC GE
Sbjct: 262 ELESIEV-LTQVSWNSIIDACMKIGE 286
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 154/366 (42%), Gaps = 66/366 (18%)
Query: 105 FDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYG-VVPNKFTYPFVLKACAGLSDLRLGK 163
D +NT++ +++ + + + L+ T LR+ P+ +++ +L CA L +++ G+
Sbjct: 33 LDTVAWNTMLTSYSRLGLHQEA-IALF-TQLRFSDAKPDDYSFTAILSTCASLGNVKFGR 90
Query: 164 AVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXX----------------------XXXX 201
+ V++ GF L V N++I MY
Sbjct: 91 KIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMN 150
Query: 202 XXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSV 261
A VF E PK + W+ MI G+A G + LF+EM PD T S+
Sbjct: 151 AEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSL 210
Query: 262 LTACAD----------LGALELGKWLESYIEWK-----------------KIPKSVELC- 293
+ AC+ + A+ L S +E K + +S+E+
Sbjct: 211 MNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLT 270
Query: 294 ----NALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVE 349
N++ID K G+ +KA+ +F IV+WT++I G +G G +A+ F EM++
Sbjct: 271 QVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMK 330
Query: 350 QGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYG----CMVDLLSRA 405
GV+ D ++ VL AC L+ G+ + I + Y +V+L ++
Sbjct: 331 SGVDSDHFAYGAVLHACSGLALLGHGKMIHGCL-----IHCGFQGYAYVGNALVNLYAKC 385
Query: 406 GFVKEA 411
G +KEA
Sbjct: 386 GDIKEA 391
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 2/138 (1%)
Query: 297 IDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDD 356
I AK G + A +F M V+W +++ + G EA++LF ++ +PDD
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 357 VSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVR 416
SF +LS C V GR S+ G + ++D+ + A R
Sbjct: 71 YSFTAILSTCASLGNVKFGRK-IQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFR 129
Query: 417 TMPVEP-NQIIWRSIITA 433
M + N++ W S++ A
Sbjct: 130 DMCCDSRNEVTWCSLLFA 147
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 249 bits (636), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 236/427 (55%), Gaps = 13/427 (3%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D + T++ FA +S + ++ YR M G ++ +L+A L D ++G++V
Sbjct: 181 DVICWTTMVTGFAQAGKSLKA-VEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSV 239
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
HG + + G ++ V+ +++ MY +A +VF +V+W +
Sbjct: 240 HGYLYRTGLPMNVVVETSLVDMYAKVGFIE-----------VASRVFSRMMFKTAVSWGS 288
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
+I G+A+ G +++A EMQ +G PD +T+V VL AC+ +G+L+ G+ + YI +
Sbjct: 289 LISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRH 348
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
+ V AL+DM++KCG + + +F + +V W ++I +HG G E VSLF
Sbjct: 349 VLDRVT-ATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFL 407
Query: 346 EMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRA 405
+M E +EPD +F +LSA HS LV++G+ +F+ M + I P +HY C++DLL+RA
Sbjct: 408 KMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARA 467
Query: 406 GFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLS 465
G V+EALD + + ++ IW ++++ C L +G+ + ++L+ P L+S
Sbjct: 468 GRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVS 527
Query: 466 NIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVD 525
N +A +W++ KVR++M M+KVPG + IE+N E+ F+ D SH ++ + +++
Sbjct: 528 NFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLR 587
Query: 526 EMGREIK 532
+ EI+
Sbjct: 588 NLKTEIR 594
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 208/464 (44%), Gaps = 62/464 (13%)
Query: 64 LINNPLVLTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQS 123
L+N + A+ I YA +F + P R S ++N++I ++ ++
Sbjct: 46 LLNGSSISRDLIASCGRIGEISYARK-VFDELP---QRGVS----VYNSMIVVYSR-GKN 96
Query: 124 KSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNT 183
L+LY M+ + P+ T+ +KAC L G+AV V FG+ +D+ V ++
Sbjct: 97 PDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSS 156
Query: 184 MIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLF 243
++++Y A +F + K D + W+ M+ G+A+ G S +AV +
Sbjct: 157 VLNLYMKCGKMDE-----------AEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFY 205
Query: 244 REMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKC 303
REMQ G D + M+ +L A DLG ++G+ + Y+ +P +V + +L+DM+AK
Sbjct: 206 REMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKV 265
Query: 304 GDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVL 363
G ++ A +F +M T VSW S+I G A +G ++A EM G +PD V+ +GVL
Sbjct: 266 GFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVL 325
Query: 364 SACCHSKLVDKGR-----------------SYFNSMEGNFGIVPK----IEHYG------ 396
AC + GR + M G + EH G
Sbjct: 326 VACSQVGSLKTGRLVHCYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVC 385
Query: 397 --CMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRSIITACHARGELKLGE---SISK 448
M+ G +E + M +EP+ + S+++A G ++ G+ S+
Sbjct: 386 WNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMI 445
Query: 449 ELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKV 492
+ +P+ E +YV L ++ A+ R V E +DM +K+
Sbjct: 446 NKYKIQPS-EKHYVCLIDLLARAGR------VEEALDMINSEKL 482
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 142/428 (33%), Positives = 237/428 (55%), Gaps = 13/428 (3%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D + T+I +A L+L+R + + + ++ +L+A + L + + K +
Sbjct: 451 DLISWTTVIAGYAQN-DCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEI 509
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H +++ G D + +QN ++ +Y A +VF+ D V+W++
Sbjct: 510 HCHILRKGLLDTV-IQNELVDVYGKCRNMG-----------YATRVFESIKGKDVVSWTS 557
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
MI A G+ S AV LFR M G+ D + ++ +L+A A L AL G+ + Y+ K
Sbjct: 558 MISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKG 617
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
+ A++DM+A CGD+ A +F +++ ++ +TS+I MHG G AV LFD
Sbjct: 618 FCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFD 677
Query: 346 EMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRA 405
+M + V PD +SF+ +L AC H+ L+D+GR + ME + + P EHY C+VD+L RA
Sbjct: 678 KMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRA 737
Query: 406 GFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLS 465
V EA +FV+ M EP +W +++ AC + E ++GE ++ LL EP + N VL+S
Sbjct: 738 NCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVS 797
Query: 466 NIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVD 525
N++A+ RW KVR M GM+K PG + IE++ ++ +F A DKSH + K+IYE +
Sbjct: 798 NVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLS 857
Query: 526 EMGREIKR 533
E+ R+++R
Sbjct: 858 EVTRKLER 865
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 137/262 (52%), Gaps = 16/262 (6%)
Query: 107 AFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVH 166
AF +NT+I A+ + +S L LY M GV ++P +LKACA L D+R G +H
Sbjct: 147 AFAWNTMIGAYVSNGEP-ASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELH 205
Query: 167 GSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDE-SPKTDSVTWSA 225
+VK G+ + N ++ MY A ++FD K D+V W++
Sbjct: 206 SLLVKLGYHSTGFIVNALVSMYAKNDDLSA-----------ARRLFDGFQEKGDAVLWNS 254
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
++ Y+ G S + LFREM + G P+ T+VS LTAC +LGK + + + K
Sbjct: 255 ILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASV-LKS 313
Query: 286 IPKSVEL--CNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSL 343
S EL CNALI M+ +CG + +A + RQM++ +V+W S+I G + EA+
Sbjct: 314 STHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEF 373
Query: 344 FDEMVEQGVEPDDVSFIGVLSA 365
F +M+ G + D+VS +++A
Sbjct: 374 FSDMIAAGHKSDEVSMTSIIAA 395
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 145/302 (48%), Gaps = 18/302 (5%)
Query: 70 VLTKFAATSSTFNAIHYATSFLFSDDPTTAPR-----ASSFDAFLFNTLIRAFAHTPQSK 124
+L K S+ F + + +DD + A R DA L+N+++ +++ + +S
Sbjct: 207 LLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSL 266
Query: 125 SSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFG-FDDDLHVQNT 183
+ L+L+R M G PN +T L AC G S +LGK +H SV+K +L+V N
Sbjct: 267 ET-LELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNA 325
Query: 184 MIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLF 243
+I MY A ++ + D VTW+++I GY + A+ F
Sbjct: 326 LIAMYTRCGKMPQ-----------AERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFF 374
Query: 244 REMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKC 303
+M G DE++M S++ A L L G L +Y+ ++++ N LIDM++KC
Sbjct: 375 SDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKC 434
Query: 304 GDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVL 363
F +M ++SWT+VI G A + EA+ LF ++ ++ +E D++ +L
Sbjct: 435 NLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSIL 494
Query: 364 SA 365
A
Sbjct: 495 RA 496
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 123/290 (42%), Gaps = 16/290 (5%)
Query: 145 TYPFVLKACAGLSDLRLGKAVHGSVVKF--GFDDDLHVQNTMIHMYXXXXXXXXXXXXXX 202
+ +VL+ C + G+ +H + K F+ D + ++ MY
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDF-LAGKLVFMYGKCGSLDD------ 134
Query: 203 XXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVL 262
A KVFDE P + W+ MIG Y G + A+ L+ M+V GV + ++L
Sbjct: 135 -----AEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALL 189
Query: 263 TACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM-DSCTI 321
ACA L + G L S + + + NAL+ M+AK D+ A LF +
Sbjct: 190 KACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDA 249
Query: 322 VSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNS 381
V W S++ + G+ E + LF EM G P+ + + L+AC G+ S
Sbjct: 250 VLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHAS 309
Query: 382 MEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSII 431
+ + ++ ++ + +R G + +A +R M + + W S+I
Sbjct: 310 VLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 153/443 (34%), Positives = 231/443 (52%), Gaps = 34/443 (7%)
Query: 63 GLINNPLVLTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQ 122
GL ++ L+K SST + YA S L P S FL+NTLI +
Sbjct: 36 GLSHHTYPLSKLLHLSSTV-CLSYALSIL-----RQIPNPS---VFLYNTLISSIVSNHN 86
Query: 123 SKSSGL--QLYRTMLRYG---VVPNKFTYPFVLKACAGLSDL-RLGKAVHGSVVKF--GF 174
S + L LY +L V PN+FTYP + KA + R G+A+H V+KF
Sbjct: 87 STQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPV 146
Query: 175 DDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRG 234
+ D VQ ++ Y A +F+ + D TW+ ++ YA
Sbjct: 147 NHDRFVQAALVGFYANCGKLRE-----------ARSLFERIREPDLATWNTLLAAYANSE 195
Query: 235 H---SSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVE 291
+ LF MQV P+E+++V+++ +CA+LG G W Y+ + +
Sbjct: 196 EIDSDEEVLLLFMRMQVR---PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQF 252
Query: 292 LCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQG 351
+ +LID+++KCG + A +F +M + + ++I GLA+HG G E + L+ ++ QG
Sbjct: 253 VGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQG 312
Query: 352 VEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEA 411
+ PD +F+ +SAC HS LVD+G FNSM+ +GI PK+EHYGC+VDLL R+G ++EA
Sbjct: 313 LVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEA 372
Query: 412 LDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKL 471
+ ++ MPV+PN +WRS + + G+ + GE K LL E + NYVLLSNIYA +
Sbjct: 373 EECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGV 432
Query: 472 RRWEQKTKVREMMDMRGMKKVPG 494
RW K RE+M + K PG
Sbjct: 433 NRWTDVEKTRELMKDHRVNKSPG 455
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 151/429 (35%), Positives = 239/429 (55%), Gaps = 18/429 (4%)
Query: 210 KVFDE-SPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADL 268
K+F E S D V W+ +I +A RA+ LF +++ + PD T SVL ACA L
Sbjct: 324 KLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGL 382
Query: 269 GALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVI 328
+ + + L N+LI +AKCG +D M +F MDS +VSW S++
Sbjct: 383 VTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSML 442
Query: 329 VGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGI 388
++HG+ + +F +M + PD +FI +LSAC H+ V++G F SM
Sbjct: 443 KAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPET 499
Query: 389 VPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESIS- 447
+P++ HY C++D+LSRA EA + ++ MP++P+ ++W +++ +C G +LG+ +
Sbjct: 500 LPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAAD 559
Query: 448 --KELLRNEPTHESNYVLLSNIY-AKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEM 504
KEL+ EPT+ +Y+ +SNIY A+ E ++EM R ++K P + E+ N++
Sbjct: 560 KLKELV--EPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWR-VRKEPDLSWTEIGNKV 616
Query: 505 CEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTT-SQVLLDIDEEDKEDALYKHSEKL 563
EF +G + + +Y + + +K GYVP S DEE +ED L HSEKL
Sbjct: 617 HEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKL 676
Query: 564 AIAFALLNTPPGTP-----IRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKN 618
A+AFA++ + I+I+KN R+C DCH+ K SK+ +EI++RD NRFHHFK+
Sbjct: 677 ALAFAVMEGRKSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKD 736
Query: 619 GLCSCGDFW 627
CSC D+W
Sbjct: 737 SSCSCNDYW 745
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 118/251 (47%), Gaps = 25/251 (9%)
Query: 106 DAFLFNTLIRAFA-HTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKA 164
D +N +I AFA + P+ + L+ + + + P+ +T+ VLKACAGL R +
Sbjct: 334 DIVAWNGIITAFAVYDPER---AIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALS 390
Query: 165 VHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWS 224
+H V+K GF D + N++IH Y L +VFD+ D V+W+
Sbjct: 391 IHAQVIKGGFLADTVLNNSLIHAY-----------AKCGSLDLCMRVFDDMDSRDVVSWN 439
Query: 225 AMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELG-KWLESYIEW 283
+M+ Y+ G + +F++M + PD T +++L+AC+ G +E G + S E
Sbjct: 440 SMLKAYSLHGQVDSILPVFQKMDIN---PDSATFIALLSACSHAGRVEEGLRIFRSMFEK 496
Query: 284 KKIPKSVELCNALIDMFAKCGDVDKAMNLFRQ--MDSCTIVSWTSVIVGLAMHGR---GS 338
+ + +IDM ++ +A + +Q MD +V W +++ HG G
Sbjct: 497 PETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVV-WIALLGSCRKHGNTRLGK 555
Query: 339 EAVSLFDEMVE 349
A E+VE
Sbjct: 556 LAADKLKELVE 566
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 23/227 (10%)
Query: 145 TYPFVLKACAGLSDLRLGKAVHGSVVK--FGFDDDLHVQNTMIHMYXXXXXXXXXXXXXX 202
Y + +ACA +L G +H ++ + + ++ + N +I+MY
Sbjct: 61 AYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILY------ 114
Query: 203 XXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVC-PDEITMVSV 261
A +VFD P+ + V+W+A+I GY + G+ LF M + C P+E T+ SV
Sbjct: 115 -----ARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM--LSHCFPNEFTLSSV 167
Query: 262 LTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGD---VDKAMNLFRQMDS 318
LT+C E GK + + S+ + NA+I M+ +C D +A +F +
Sbjct: 168 LTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKF 223
Query: 319 CTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSA 365
+V+W S+I G +A+ +F M GV D + + + S+
Sbjct: 224 KNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSS 270
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 5/137 (3%)
Query: 232 RRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKI--PKS 289
R G RAV LF V + ++ ACA+ L G L ++ ++
Sbjct: 38 RSGDIRRAVSLFYSAPVE--LQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQN 95
Query: 290 VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVE 349
V L N LI+M+AKCG++ A +F M +VSWT++I G G E LF M+
Sbjct: 96 VILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLS 155
Query: 350 QGVEPDDVSFIGVLSAC 366
P++ + VL++C
Sbjct: 156 HCF-PNEFTLSSVLTSC 171
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/423 (31%), Positives = 229/423 (54%), Gaps = 12/423 (2%)
Query: 103 SSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLG 162
S D + +LI A+ Q + ++ + M V PN+ T+ + ACA LS L G
Sbjct: 271 SERDVVSWTSLIVAYKRIGQ-EVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWG 329
Query: 163 KAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVT 222
+ +H +V+ G +D L V N+M+ MY A +F D ++
Sbjct: 330 EQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVS-----------ASVLFQGMRCRDIIS 378
Query: 223 WSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIE 282
WS +IGGY + G F M+ G P + + S+L+ ++ +E G+ + +
Sbjct: 379 WSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALAL 438
Query: 283 WKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVS 342
+ ++ + ++LI+M++KCG + +A +F + D IVS T++I G A HG+ EA+
Sbjct: 439 CFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAID 498
Query: 343 LFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLL 402
LF++ ++ G PD V+FI VL+AC HS +D G YFN M+ + + P EHYGCMVDLL
Sbjct: 499 LFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLL 558
Query: 403 SRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYV 462
RAG + +A + M + + ++W +++ AC A+G+++ G ++ +L +PT + V
Sbjct: 559 CRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALV 618
Query: 463 LLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYE 522
L+NIY+ E+ VR+ M +G+ K PG + I++ + + FV+GD+ H Q + IY
Sbjct: 619 TLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYN 678
Query: 523 MVD 525
+++
Sbjct: 679 ILE 681
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 170/372 (45%), Gaps = 47/372 (12%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
+A + +I H + K GL + M R + + +T+ LKACAGL ++ GKA+
Sbjct: 173 NAVTWTAIITGLVHAGRYKE-GLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAI 231
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H V+ GF L V N++ MY +F+ + D V+W++
Sbjct: 232 HTHVIVRGFVTTLCVANSLATMYTECGEMQDGLC-----------LFENMSERDVVSWTS 280
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
+I Y R G +AV F +M+ V P+E T S+ +ACA L L G+ L +
Sbjct: 281 LIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLG 340
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
+ S+ + N+++ M++ CG++ A LF+ M I+SW+++I G G G E F
Sbjct: 341 LNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFS 400
Query: 346 EMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRA 405
M + G +P D + +LS + +++ GR +++ FG+ ++++ S+
Sbjct: 401 WMRQSGTKPTDFALASLLSVSGNMAVIEGGRQ-VHALALCFGLEQNSTVRSSLINMYSKC 459
Query: 406 GFV-------------------------------KEALD-FVRTMPV--EPNQIIWRSII 431
G + KEA+D F +++ V P+ + + S++
Sbjct: 460 GSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVL 519
Query: 432 TACHARGELKLG 443
TAC G+L LG
Sbjct: 520 TACTHSGQLDLG 531
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 152/335 (45%), Gaps = 19/335 (5%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTM--LRYGVVPNKFTYPFVLKACAGLSDLRLGK 163
D + ++I+ + T + L L+ M + + V P+ VLKAC S++ G+
Sbjct: 70 DIVSWTSIIKRYV-TANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGE 128
Query: 164 AVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTW 223
++H VK ++V ++++ MY + +VF E P ++VTW
Sbjct: 129 SLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDK-----------SCRVFSEMPFRNAVTW 177
Query: 224 SAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEW 283
+A+I G G + F EM D T L ACA L ++ GK + +++
Sbjct: 178 TAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIV 237
Query: 284 KKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSL 343
+ ++ + N+L M+ +CG++ + LF M +VSWTS+IV G+ +AV
Sbjct: 238 RGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVET 297
Query: 344 FDEMVEQGVEPDDVSFIGVLSACCH-SKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLL 402
F +M V P++ +F + SAC S+LV + + N + + G+ + M+ +
Sbjct: 298 FIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVL--SLGLNDSLSVSNSMMKMY 355
Query: 403 SRAGFVKEALDFVRTMPVEPNQIIWRSIITA-CHA 436
S G + A + M + I W +II C A
Sbjct: 356 STCGNLVSASVLFQGMRCR-DIISWSTIIGGYCQA 389
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 126/269 (46%), Gaps = 5/269 (1%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVM--GVCPDEITMVSVLTAC 265
A +VFD+ P D V+W+++I Y +S A+ LF M+V+ V PD + VL AC
Sbjct: 59 ARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKAC 118
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
+ G+ L +Y + SV + ++L+DM+ + G +DK+ +F +M V+WT
Sbjct: 119 GQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWT 178
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
++I GL GR E ++ F EM D +F L AC + V G++ +
Sbjct: 179 AIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVR 238
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARG-ELKLGE 444
G V + + + + G +++ L M E + + W S+I A G E+K E
Sbjct: 239 -GFVTTLCVANSLATMYTECGEMQDGLCLFENMS-ERDVVSWTSLIVAYKRIGQEVKAVE 296
Query: 445 SISKELLRNEPTHESNYVLLSNIYAKLRR 473
+ K P +E + + + A L R
Sbjct: 297 TFIKMRNSQVPPNEQTFASMFSACASLSR 325
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 5/198 (2%)
Query: 294 NALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEM--VEQG 351
N+ + G++ A +F +M IVSWTS+I EA+ LF M V+
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 352 VEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEA 411
V PD VL AC S + G S ++ ++ + ++D+ R G + ++
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGES-LHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKS 162
Query: 412 LDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHES-NYVLLSNIYAK 470
MP N + W +IIT G K G + E+ R+E ++ + + A
Sbjct: 163 CRVFSEMPFR-NAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAG 221
Query: 471 LRRWEQKTKVREMMDMRG 488
LR+ + + + +RG
Sbjct: 222 LRQVKYGKAIHTHVIVRG 239
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 133/396 (33%), Positives = 224/396 (56%), Gaps = 18/396 (4%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLR-YGVVPNKFTYPFVLKACAGLSDLRLGKA 164
D + ++ AF+ + + L L+ M R G+VP+ T+ VL AC L L+ GK
Sbjct: 228 DVICWTAVLSAFSKNDLYEEA-LGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKE 286
Query: 165 VHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWS 224
+HG ++ G ++ V+++++ MY A +VF+ K +SV+WS
Sbjct: 287 IHGKLITNGIGSNVVVESSLLDMYGKCGSVRE-----------ARQVFNGMSKKNSVSWS 335
Query: 225 AMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWK 284
A++GGY + G +A+ +FREM+ D +VL ACA L A+ LGK + +
Sbjct: 336 ALLGGYCQNGEHEKAIEIFREMEE----KDLYCFGTVLKACAGLAAVRLGKEIHGQYVRR 391
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLF 344
+V + +ALID++ K G +D A ++ +M +++W +++ LA +GRG EAVS F
Sbjct: 392 GCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFF 451
Query: 345 DEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSR 404
++MV++G++PD +SFI +L+AC H+ +VD+GR+YF M ++GI P EHY CM+DLL R
Sbjct: 452 NDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGR 511
Query: 405 AGFVKEALDFVRTMPVEPNQIIWRSIITACHARGEL-KLGESISKELLRNEPTHESNYVL 463
AG +EA + + + +W ++ C A + ++ E I+K ++ EP + +YVL
Sbjct: 512 AGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVL 571
Query: 464 LSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIE 499
LSN+Y + R +R++M RG+ K G + I+
Sbjct: 572 LSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 170/339 (50%), Gaps = 25/339 (7%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
DA + +++ + T + L+++ M+ +G+ N+FT +KAC+ L ++RLG+
Sbjct: 127 DAISWTSMMSGYV-TGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCF 185
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
HG V+ GF+ + + +T+ ++Y A +VFDE P+ D + W+A
Sbjct: 186 HGVVITHGFEWNHFISSTLAYLYGVNREPVD-----------ARRVFDEMPEPDVICWTA 234
Query: 226 MIGGYARRGHSSRAVGLFREM-QVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWK 284
++ +++ A+GLF M + G+ PD T +VLTAC +L L+ GK + +
Sbjct: 235 VLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN 294
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLF 344
I +V + ++L+DM+ KCG V +A +F M VSW++++ G +G +A+ +F
Sbjct: 295 GIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIF 354
Query: 345 DEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM--EGNFGIVPKIEHYGCMVDLL 402
EM E+ D F VL AC V G+ G FG V +E ++DL
Sbjct: 355 REMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVI-VE--SALIDLY 407
Query: 403 SRAGFVKEALDFVRTMPVEPNQIIWRSIITAC--HARGE 439
++G + A M + N I W ++++A + RGE
Sbjct: 408 GKSGCIDSASRVYSKMSIR-NMITWNAMLSALAQNGRGE 445
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 138/311 (44%), Gaps = 23/311 (7%)
Query: 146 YPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXX 205
Y +L+ C + G H VVK G + D +V N+++ +Y
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETR------ 117
Query: 206 XLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTAC 265
+VFD D+++W++M+ GY +A+ +F EM G+ +E T+ S + AC
Sbjct: 118 ----RVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKAC 173
Query: 266 ADLGALELGKWLESYI-----EWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCT 320
++LG + LG+ + EW S L ++ + A +F +M
Sbjct: 174 SELGEVRLGRCFHGVVITHGFEWNHFISST-----LAYLYGVNREPVDARRVFDEMPEPD 228
Query: 321 IVSWTSVIVGLAMHGRGSEAVSLFDEMVE-QGVEPDDVSFIGVLSACCHSKLVDKGRSYF 379
++ WT+V+ + + EA+ LF M +G+ PD +F VL+AC + + + +G+
Sbjct: 229 VICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIH 288
Query: 380 NSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGE 439
+ N GI + ++D+ + G V+EA M + N + W +++ GE
Sbjct: 289 GKLITN-GIGSNVVVESSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLGGYCQNGE 346
Query: 440 LKLGESISKEL 450
+ I +E+
Sbjct: 347 HEKAIEIFREM 357
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 220/399 (55%), Gaps = 15/399 (3%)
Query: 103 SSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLG 162
S D ++ +I + H S + L L++ M + PN T VL C + +L LG
Sbjct: 304 SHVDLVMWTAMIVGYTHNG-SVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELG 362
Query: 163 KAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVT 222
++VHG +K G D +V N ++HMY A VF+ + D V
Sbjct: 363 RSVHGLSIKVGIWDT-NVANALVHMYAKCYQNRD-----------AKYVFEMESEKDIVA 410
Query: 223 WSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESY-I 281
W+++I G+++ G A+ LF M V P+ +T+ S+ +ACA LG+L +G L +Y +
Sbjct: 411 WNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSV 470
Query: 282 EWKKIPKS-VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEA 340
+ + S V + AL+D +AKCGD A +F ++ ++W+++I G G +
Sbjct: 471 KLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGS 530
Query: 341 VSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVD 400
+ LF+EM+++ +P++ +F +LSAC H+ +V++G+ YF+SM ++ P +HY CMVD
Sbjct: 531 LELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVD 590
Query: 401 LLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESN 460
+L+RAG +++ALD + MP++P+ + + + C LGE + K++L P S
Sbjct: 591 MLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASY 650
Query: 461 YVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIE 499
YVL+SN+YA RW Q +VR +M RG+ K+ G + +E
Sbjct: 651 YVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 166/377 (44%), Gaps = 53/377 (14%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +L+ ++R + +S ++LY ++++G + + LKAC L DL GK +
Sbjct: 106 DFYLWKVMLRCYCLNKESVEV-VKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKI 164
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H +VK D++ V ++ MY A KVF++ + V W++
Sbjct: 165 HCQLVKVPSFDNV-VLTGLLDMYAKCGEIKS-----------AHKVFNDITLRNVVCWTS 212
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
MI GY + + LF M+ V +E T +++ AC L AL GKW +
Sbjct: 213 MIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSG 272
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
I S L +L+DM+ KCGD+ A +F + +V WT++IVG +G +EA+SLF
Sbjct: 273 IELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQ 332
Query: 346 EMVEQGVEPDDVSFIGVLSACCHSKLVDKGRS---------------------------- 377
+M ++P+ V+ VLS C + ++ GRS
Sbjct: 333 KMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQ 392
Query: 378 -----YFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTM---PVEPNQIIWRS 429
Y ME IV + ++ S+ G + EAL M V PN + S
Sbjct: 393 NRDAKYVFEMESEKDIVA----WNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVAS 448
Query: 430 IITACHARGELKLGESI 446
+ +AC + G L +G S+
Sbjct: 449 LFSACASLGSLAVGSSL 465
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 135/334 (40%), Gaps = 52/334 (15%)
Query: 148 FVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXL 207
+L C + LR HG + G D+ + ++ +Y
Sbjct: 49 LLLSKCTNIDSLR---QSHGVLTGNGLMGDISIATKLVSLYGFFGYTKD----------- 94
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A VFD+ P+ D W M+ Y S V L+ + G D+I L AC +
Sbjct: 95 ARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTE 154
Query: 268 LGALELGKWLESYIEWKKIPK--SVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
L L+ GK + + + K+P +V L L+DM+AKCG++ A +F + +V WT
Sbjct: 155 LQDLDNGKKI--HCQLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWT 211
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSME-- 383
S+I G + E + LF+ M E V ++ ++ ++ AC + +G+ + +
Sbjct: 212 SMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKS 271
Query: 384 -------------------GNFGIVPKIEHYGCMVDLL---------SRAGFVKEALDFV 415
G+ ++ + VDL+ + G V EAL
Sbjct: 272 GIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLF 331
Query: 416 RTMP---VEPNQIIWRSIITACHARGELKLGESI 446
+ M ++PN + S+++ C L+LG S+
Sbjct: 332 QKMKGVEIKPNCVTIASVLSGCGLIENLELGRSV 365
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 245 bits (625), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 140/446 (31%), Positives = 230/446 (51%), Gaps = 44/446 (9%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +NT++ +A + L Y+ R G+ N+F++ +L AC L+L +
Sbjct: 143 DVVSWNTMVIGYAQDGNLHEA-LWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQA 201
Query: 166 HGSVVKFGF---------------------------DD----DLHVQNTMIHMYXXXXXX 194
HG V+ GF D+ D+H+ T+I Y
Sbjct: 202 HGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDM 261
Query: 195 XXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPD 254
A K+F E P+ + V+W+A+I GY R+G +RA+ LFR+M +GV P+
Sbjct: 262 EA-----------AEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPE 310
Query: 255 EITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFR 314
+ T S L A A + +L GK + Y+ + + + ++LIDM++K G ++ + +FR
Sbjct: 311 QFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFR 370
Query: 315 QMD-SCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVD 373
D V W ++I LA HG G +A+ + D+M++ V+P+ + + +L+AC HS LV+
Sbjct: 371 ICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVE 430
Query: 374 KGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITA 433
+G +F SM GIVP EHY C++DLL RAG KE + + MP EP++ IW +I+
Sbjct: 431 EGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGV 490
Query: 434 CHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVP 493
C G +LG+ + EL++ +P + Y+LLS+IYA +WE K+R +M R + K
Sbjct: 491 CRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEK 550
Query: 494 GSTMIELNNEMCEFVAGDKSHDQYKQ 519
+ IE+ ++ F D SH ++
Sbjct: 551 AVSWIEIEKKVEAFTVSDGSHAHARK 576
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 114/259 (44%), Gaps = 32/259 (12%)
Query: 211 VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGA 270
VFD P+ D V+W+ M+ GYA+ G+ A+ ++E + G+ +E + +LTAC
Sbjct: 135 VFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQ 194
Query: 271 LELGKWLESYIEWKKIPKSVELCNALIDMFAKC--------------------------- 303
L+L + + +V L ++ID +AKC
Sbjct: 195 LQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISG 254
Query: 304 ----GDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSF 359
GD++ A LF +M VSWT++I G G G+ A+ LF +M+ GV+P+ +F
Sbjct: 255 YAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTF 314
Query: 360 IGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP 419
L A + G+ M + P ++D+ S++G ++ + R
Sbjct: 315 SSCLCASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKSGSLEASERVFRICD 373
Query: 420 VEPNQIIWRSIITACHARG 438
+ + + W ++I+A G
Sbjct: 374 DKHDCVFWNTMISALAQHG 392
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 112/265 (42%), Gaps = 36/265 (13%)
Query: 225 AMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWK 284
+ + +A + S+AV + G+ + S+L C D +L+ GKW+ +++
Sbjct: 16 SFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 285 --KIPKSVELCNALIDMFAKCGDVDKAMNLFRQM-------------------------- 316
K P ++ L N LI M+ KCG A +F QM
Sbjct: 76 GFKRPNTL-LSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARV 134
Query: 317 --DSCT---IVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKL 371
DS +VSW ++++G A G EA+ + E G++ ++ SF G+L+AC S+
Sbjct: 135 VFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQ 194
Query: 372 VDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSII 431
+ R + G + + ++D ++ G ++ A M V+ IW ++I
Sbjct: 195 LQLNRQAHGQVLVA-GFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIH-IWTTLI 252
Query: 432 TACHARGELKLGESISKELLRNEPT 456
+ G+++ E + E+ P
Sbjct: 253 SGYAKLGDMEAAEKLFCEMPEKNPV 277
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 245 bits (625), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 141/418 (33%), Positives = 221/418 (52%), Gaps = 28/418 (6%)
Query: 91 LFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVL 150
+F D P ++ + +LI F + + S ++ +R M GV N+ +L
Sbjct: 164 VFEDIP-------QWNVVAWGSLISGFVNNNRF-SDAIEAFREMQSNGVKANETIMVDLL 215
Query: 151 KACAGLSDLRLGKAVHGSVVKFGFDD--------DLHVQNTMIHMYXXXXXXXXXXXXXX 202
AC D+ GK HG + GFD ++ + ++I MY
Sbjct: 216 VACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRT------ 269
Query: 203 XXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVL 262
A +FD P+ V+W+++I GY++ G + A+ +F +M +G+ PD++T +SV+
Sbjct: 270 -----ARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVI 324
Query: 263 TACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIV 322
A G +LG+ + +Y+ K + AL++M+AK GD + A F ++ +
Sbjct: 325 RASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTI 384
Query: 323 SWTSVIVGLAMHGRGSEAVSLFDEMVEQG-VEPDDVSFIGVLSACCHSKLVDKGRSYFNS 381
+WT VI+GLA HG G+EA+S+F M E+G PD ++++GVL AC H LV++G+ YF
Sbjct: 385 AWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAE 444
Query: 382 MEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELK 441
M G+ P +EHYGCMVD+LSRAG +EA V+TMPV+PN IW +++ C L+
Sbjct: 445 MRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLE 504
Query: 442 LGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIE 499
L + I + E YVLLSNIYAK RW +RE M + + KV G + +E
Sbjct: 505 LTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 203/431 (47%), Gaps = 33/431 (7%)
Query: 71 LTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQL 130
L F T + YA S S D + +++N++IR ++++P + L
Sbjct: 44 LIDFCTTCPETMNLSYARSVFESIDCPSV--------YIWNSMIRGYSNSPNPDKA-LIF 94
Query: 131 YRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXX 190
Y+ MLR G P+ FT+P+VLKAC+GL D++ G VHG VVK GF+ +++V ++HMY
Sbjct: 95 YQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMC 154
Query: 191 XXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMG 250
+VF++ P+ + V W ++I G+ S A+ FREMQ G
Sbjct: 155 CGEVNYGL-----------RVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNG 203
Query: 251 VCPDEITMVSVLTACADLGALELGKWLESYIE--------WKKIPKSVELCNALIDMFAK 302
V +E MV +L AC + GKW +++ K+ +V L +LIDM+AK
Sbjct: 204 VKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAK 263
Query: 303 CGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGV 362
CGD+ A LF M T+VSW S+I G + +G EA+ +F +M++ G+ PD V+F+ V
Sbjct: 264 CGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSV 323
Query: 363 LSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEP 422
+ A G+S ++ G V +V++ ++ G + A + +
Sbjct: 324 IRASMIQGCSQLGQS-IHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLE-KK 381
Query: 423 NQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRW---EQKTK 479
+ I W +I + G SI + + L +YA E +
Sbjct: 382 DTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRY 441
Query: 480 VREMMDMRGMK 490
EM D+ G++
Sbjct: 442 FAEMRDLHGLE 452
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/415 (32%), Positives = 225/415 (54%), Gaps = 30/415 (7%)
Query: 153 CAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXX-------------- 198
CA L L + + VHG V+K GF++ L +N +IH+Y
Sbjct: 304 CAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESW 363
Query: 199 XXXXXXXXLAGKV------FDE--------SPKTDSVTWSAMIGGYARRGHSSRAVGLFR 244
AGK+ F E + K + VTW+++I G +G ++ FR
Sbjct: 364 NSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFR 423
Query: 245 EMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCG 304
+MQ V + +T+ +L+ CA+L AL LG+ + ++ + +++ + NAL++M+AKCG
Sbjct: 424 QMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCG 483
Query: 305 DVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLS 364
+ + +F + ++SW S+I G MHG +A+S+FD M+ G PD ++ + VLS
Sbjct: 484 LLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLS 543
Query: 365 ACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQ 424
AC H+ LV+KGR F SM FG+ P+ EHY C+VDLL R GF+KEA + V+ MP+EP
Sbjct: 544 ACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKV 603
Query: 425 IIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMM 484
+ +++ +C + + E I+ +L EP +Y+LLSNIY+ RWE+ VR +
Sbjct: 604 CVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALA 663
Query: 485 DMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPT 539
+ +KKV GS+ IE+ + +F +G +++ IY +++++ + + G PT
Sbjct: 664 KKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKG--PT 716
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 140/317 (44%), Gaps = 51/317 (16%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D L+N++++A +++ L+LYR M + G+ + + P +L+AC L L +A
Sbjct: 122 DLRLWNSILKANVSHGLYENA-LELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAF 180
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H V++ G ++LHV N ++ +Y A +F E P + ++W+
Sbjct: 181 HTQVIQIGLKENLHVVNELLTLYPKAGRMGD-----------AYNLFVEMPVRNRMSWNV 229
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVL----------------------- 262
MI G+++ AV +F MQ PDE+T SVL
Sbjct: 230 MIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSG 289
Query: 263 ------------TACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAM 310
+ CA+L AL + + + Y+ + + NALI ++ K G V A
Sbjct: 290 NAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAE 349
Query: 311 NLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQ----GVEPDDVSFIGVLSAC 366
+LFRQ+ + I SW S+I G+ EA+SLF E+ E V+ + V++ V+ C
Sbjct: 350 HLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGC 409
Query: 367 CHSKLVDKGRSYFNSME 383
D YF M+
Sbjct: 410 NVQGRGDDSLEYFRQMQ 426
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 16/192 (8%)
Query: 128 LQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHM 187
L+ +R M V+ N T +L CA L L LG+ +HG V++ +++ VQN +++M
Sbjct: 419 LEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNM 478
Query: 188 YXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQ 247
Y VF+ D ++W+++I GY G + +A+ +F M
Sbjct: 479 YAKCGLLSE-----------GSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMI 527
Query: 248 VMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK---IPKSVELCNALIDMFAKCG 304
G PD I +V+VL+AC+ G +E G+ E + K + E ++D+ + G
Sbjct: 528 SSGFHPDGIALVAVLSACSHAGLVEKGR--EIFYSMSKRFGLEPQQEHYACIVDLLGRVG 585
Query: 305 DVDKAMNLFRQM 316
+ +A + + M
Sbjct: 586 FLKEASEIVKNM 597
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 2/153 (1%)
Query: 218 TDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWL 277
+D W++++ G A+ L+R M+ G+ D + +L AC LG L +
Sbjct: 121 SDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAF 180
Query: 278 ESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRG 337
+ + + +++ + N L+ ++ K G + A NLF +M +SW +I G +
Sbjct: 181 HTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDC 240
Query: 338 SEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSK 370
AV +F+ M + +PD+V++ VLS CHS+
Sbjct: 241 ESAVKIFEWMQREEFKPDEVTWTSVLS--CHSQ 271
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 241 bits (616), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 126/390 (32%), Positives = 219/390 (56%), Gaps = 13/390 (3%)
Query: 136 RYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXX 195
R G + + +++C D R G H +K GF D+++ ++++ +Y
Sbjct: 113 RDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVE 172
Query: 196 XXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDE 255
A KVF+E P+ + V+W+AMI G+A+ + L+ +M+ P++
Sbjct: 173 N-----------AYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPND 221
Query: 256 ITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQ 315
T ++L+AC GAL G+ + + + + N+LI M+ KCGD+ A +F Q
Sbjct: 222 YTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQ 281
Query: 316 MDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMV-EQGVEPDDVSFIGVLSACCHSKLVDK 374
+ +VSW S+I G A HG +A+ LF+ M+ + G +PD ++++GVLS+C H+ LV +
Sbjct: 282 FSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKE 341
Query: 375 GRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITAC 434
GR +FN M G+ P++ HY C+VDLL R G ++EAL+ + MP++PN +IW S++ +C
Sbjct: 342 GRKFFNLM-AEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSC 400
Query: 435 HARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPG 494
G++ G ++E L EP + +V L+N+YA + W++ VR++M +G+K PG
Sbjct: 401 RVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPG 460
Query: 495 STMIELNNEMCEFVAGDKSHDQYKQIYEMV 524
+ IE+NN + F A D S+ + +I ++
Sbjct: 461 CSWIEINNYVFMFKAEDGSNCRMLEIVHVL 490
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 15/230 (6%)
Query: 128 LQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHM 187
L+LY M + PN +T+ +L AC G L G++VH + G LH+ N++I M
Sbjct: 206 LKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISM 265
Query: 188 YXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQ 247
Y A ++FD+ D V+W++MI GYA+ G + +A+ LF M
Sbjct: 266 YCKCGDLKD-----------AFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMM 314
Query: 248 -VMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDV 306
G PD IT + VL++C G ++ G+ + + + + + L+D+ + G +
Sbjct: 315 PKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLL 374
Query: 307 DKAMNLFRQMD-SCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPD 355
+A+ L M V W S++ +HG + +E + +EPD
Sbjct: 375 QEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLM--LEPD 422
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/414 (33%), Positives = 218/414 (52%), Gaps = 22/414 (5%)
Query: 125 SSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTM 184
SSGLQ V P TY +L+ C + GK +H + GF + +++ +
Sbjct: 101 SSGLQ---------VEPE--TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKL 149
Query: 185 IHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFR 244
+ +Y AG +F D + W+AMI GY ++G + ++
Sbjct: 150 LILYALSGDLQT-----------AGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYY 198
Query: 245 EMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCG 304
+M+ + PD+ T SV AC+ L LE GK + + + I ++ + +AL+DM+ KC
Sbjct: 199 DMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCS 258
Query: 305 DVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLS 364
+F Q+ + +++WTS+I G HG+ SE + F++M E+G P+ V+F+ VL+
Sbjct: 259 SFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLT 318
Query: 365 ACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQ 424
AC H LVDKG +F SM+ ++GI P+ +HY MVD L RAG ++EA +FV P + +
Sbjct: 319 ACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHP 378
Query: 425 IIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMM 484
+W S++ AC G +KL E + + L +PT+ NYV+ +N YA E +KVR M
Sbjct: 379 PVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKM 438
Query: 485 DMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVP 538
+ G+KK PG + IEL E+ F+ D SH ++IY+ V EM Y P
Sbjct: 439 ENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYP 492
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 104/235 (44%), Gaps = 20/235 (8%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +N +I + + GL +Y M + +VP+++T+ V +AC+ L L GK
Sbjct: 173 DLIPWNAMISGYVQKGLEQE-GLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRA 231
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H ++K ++ V + ++ MY +VFD+ + +TW++
Sbjct: 232 HAVMIKRCIKSNIIVDSALVDMYFKCSSFSD-----------GHRVFDQLSTRNVITWTS 280
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
+I GY G S + F +M+ G P+ +T + VLTAC G ++ G W E + K+
Sbjct: 281 LISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKG-W-EHFYSMKR 338
Query: 286 ---IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCT--IVSWTSVIVGLAMHG 335
I + A++D + G + +A F C W S++ +HG
Sbjct: 339 DYGIEPEGQHYAAMVDTLGRAGRLQEAYE-FVMKSPCKEHPPVWGSLLGACRIHG 392
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 140/454 (30%), Positives = 240/454 (52%), Gaps = 31/454 (6%)
Query: 70 VLTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQ 129
+L +F +S+ IH + L + + A R + ++NTLIR++ T + K+S L
Sbjct: 19 LLQRFLYSSNQIKQIH---TVLLTSNALVASRWKT--KCVYNTLIRSYLTTGEYKTS-LA 72
Query: 130 LYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMY- 188
L+ ML V PN T+P ++KA + G A+HG +K GF D VQ + + Y
Sbjct: 73 LFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYG 132
Query: 189 -------------------XXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
A + F P TD V+W+ +I G
Sbjct: 133 EVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVING 192
Query: 230 YARRGHSSRAVGLFREM---QVMGVCPDEITMVSVLTACA--DLGALELGKWLESYIEWK 284
++++G ++A+ +F EM + + P+E T VSVL++CA D G + LGK + Y+ K
Sbjct: 193 FSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSK 252
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLF 344
+I + L AL+DM+ K GD++ A+ +F Q+ + +W ++I LA +GR +A+ +F
Sbjct: 253 EIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMF 312
Query: 345 DEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSR 404
+ M V P+ ++ + +L+AC SKLVD G F+S+ + I+P EHYGC+VDL+ R
Sbjct: 313 EMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGR 372
Query: 405 AGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLL 464
AG + +A +F++++P EP+ + +++ AC +LG ++ K+L+ +P H YV L
Sbjct: 373 AGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVAL 432
Query: 465 SNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMI 498
S A W + K+R+ M G++K+P +++
Sbjct: 433 STFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 239 bits (609), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 134/436 (30%), Positives = 229/436 (52%), Gaps = 19/436 (4%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +N +I A+ + + + ++ M G +P+ + +L A L G +
Sbjct: 335 DTASWNVIIAGLANNGYADEA-VSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQI 393
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H ++K+GF DL V N+++ MY D DSV+W+
Sbjct: 394 HSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFE----------DFRNNADSVSWNT 443
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
++ + + LF+ M V PD ITM ++L C ++ +L+LG + Y
Sbjct: 444 ILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTG 503
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
+ + N LIDM+AKCG + +A +F MD+ +VSW+++IVG A G G EA+ LF
Sbjct: 504 LAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFK 563
Query: 346 EMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRA 405
EM G+EP+ V+F+GVL+AC H LV++G + +M+ GI P EH C+VDLL+RA
Sbjct: 564 EMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARA 623
Query: 406 GFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLS 465
G + EA F+ M +EP+ ++W+++++AC +G + L + ++ +L+ +P + + +VLL
Sbjct: 624 GRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLC 683
Query: 466 NIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIY---- 521
+++A WE +R M +KK+PG + IE+ +++ F A D H + IY
Sbjct: 684 SMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLH 743
Query: 522 ----EMVDEMGREIKR 533
+M+DE + K+
Sbjct: 744 NIWSQMLDECNPQHKK 759
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 152/326 (46%), Gaps = 14/326 (4%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+ ++I ++ Q + ++LY ML+ +VP++F + ++KACA SD+ LGK +H V
Sbjct: 136 YTSVITGYSQNGQG-AEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQV 194
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
+K L QN +I MY A +VF P D ++WS++I G
Sbjct: 195 IKLESSSHLIAQNALIAMYVRFNQMSD-----------ASRVFYGIPMKDLISWSSIIAG 243
Query: 230 YARRGHSSRAVGLFREMQVMGVC-PDEITMVSVLTACADLGALELGKWLESYIEWKKIPK 288
+++ G A+ +EM GV P+E S L AC+ L + G + ++
Sbjct: 244 FSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAG 303
Query: 289 SVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMV 348
+ +L DM+A+CG ++ A +F Q++ SW +I GLA +G EAVS+F +M
Sbjct: 304 NAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMR 363
Query: 349 EQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFV 408
G PD +S +L A + +G +S +G + + ++ + + +
Sbjct: 364 SSGFIPDAISLRSLLCAQTKPMALSQGMQ-IHSYIIKWGFLADLTVCNSLLTMYTFCSDL 422
Query: 409 KEALDFVRTMPVEPNQIIWRSIITAC 434
+ + + W +I+TAC
Sbjct: 423 YCCFNLFEDFRNNADSVSWNTILTAC 448
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 154/357 (43%), Gaps = 56/357 (15%)
Query: 127 GLQLYRTMLRYGVV-PNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMI 185
L + ML +GV PN++ + LKAC+ L G +HG +K + ++
Sbjct: 253 ALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLC 312
Query: 186 HMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFRE 245
MY A +VFD+ + D+ +W+ +I G A G++ AV +F +
Sbjct: 313 DMYARCGFLNS-----------ARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQ 361
Query: 246 MQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGD 305
M+ G PD I++ S+L A AL G + SYI + +CN+L+ M+ C D
Sbjct: 362 MRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSD 421
Query: 306 VDKAMNLFRQM-DSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLS 364
+ NLF ++ VSW +++ H + E + LF M+ EPD ++ +L
Sbjct: 422 LYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLR 481
Query: 365 AC-------------CHS-------------KLVD---------KGRSYFNSMEGNFGIV 389
C C+S L+D + R F+SM+
Sbjct: 482 GCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR---- 537
Query: 390 PKIEHYGCMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRSIITACHARGELKLG 443
+ + ++ +++GF +EAL + M +EPN + + ++TAC G ++ G
Sbjct: 538 -DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEG 593
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 131/303 (43%), Gaps = 30/303 (9%)
Query: 145 TYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXX 204
TY ++ AC+ L G+ +H ++ D + N ++ MY
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRD-------- 120
Query: 205 XXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTA 264
A +VFD P+ + V+++++I GY++ G + A+ L+ +M + PD+ S++ A
Sbjct: 121 ---AREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKA 177
Query: 265 CADLGALELGKWLESYIEWKKIPKSVELC--NALIDMFAKCGDVDKAMNLFRQMDSCTIV 322
CA + LGK L + + K+ S L NALI M+ + + A +F + ++
Sbjct: 178 CASSSDVGLGKQLHAQV--IKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLI 235
Query: 323 SWTSVIVGLAMHGRGSEAVSLFDEMVEQGV-EPDDVSFIGVLSACCHSKLVDKGRSYFNS 381
SW+S+I G + G EA+S EM+ GV P++ F L AC D G
Sbjct: 236 SWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQI--- 292
Query: 382 MEGNFGIVPKIEHYG------CMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACH 435
G+ K E G + D+ +R GF+ A + P+ W II
Sbjct: 293 ----HGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIAGLA 347
Query: 436 ARG 438
G
Sbjct: 348 NNG 350
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 257 TMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM 316
T +S++ AC+ +L G+ + +I L N ++ M+ KCG + A +F M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 317 DSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGR 376
+VS+TSVI G + +G+G+EA+ L+ +M+++ + PD +F ++ AC S V G+
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 377 SY-------------------------FNSMEGN----FGIVPK-IEHYGCMVDLLSRAG 406
FN M +GI K + + ++ S+ G
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 407 FVKEALDFVRTM----PVEPNQIIWRSIITACHARGELKLGESISKELLRNE 454
F EAL ++ M PN+ I+ S + AC + G I +++E
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSE 300
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 123/389 (31%), Positives = 221/389 (56%), Gaps = 14/389 (3%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+NT+++ + + ++L+R + G+ + + V+ +C+ + + LGK++H V
Sbjct: 401 WNTMLKGYGKM-KCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYV 459
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
VK D + V N++I +Y +A ++F E+ T+ +TW+AMI
Sbjct: 460 VKTSLDLTISVVNSLIDLYGKMGDLT-----------VAWRMFCEA-DTNVITWNAMIAS 507
Query: 230 YARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKS 289
Y S +A+ LF M P IT+V++L AC + G+LE G+ + YI + +
Sbjct: 508 YVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMN 567
Query: 290 VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVE 349
+ L ALIDM+AKCG ++K+ LF + V W +I G MHG A++LFD+M E
Sbjct: 568 LSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEE 627
Query: 350 QGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVK 409
V+P +F+ +LSAC H+ LV++G+ F M + + P ++HY C+VDLLSR+G ++
Sbjct: 628 SDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMH-QYDVKPNLKHYSCLVDLLSRSGNLE 686
Query: 410 EALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYA 469
EA V +MP P+ +IW +++++C GE ++G +++ + ++P ++ Y++L+N+Y+
Sbjct: 687 EAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYS 746
Query: 470 KLRRWEQKTKVREMMDMRGMKKVPGSTMI 498
+WE+ + REMM G+ K G +++
Sbjct: 747 AAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 156/322 (48%), Gaps = 23/322 (7%)
Query: 66 NNPLVLTKFAATSSTFNAIHYATSFLFSDDPTTAPRA----SSFDAFLFNTLIRA-FAHT 120
+N L++T + + F A +S+ P + R + D FL+N++I+A F++
Sbjct: 46 HNALIITG-GLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNG 104
Query: 121 PQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFG-FDDDLH 179
++S L + +ML G P+ FT P V+ ACA L +G VHG V+K G FD +
Sbjct: 105 DYARS--LCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTA 162
Query: 180 VQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRA 239
V + ++ Y A VFDE P D V W+A+I G+ + G S
Sbjct: 163 VGASFVYFYSKCGFLQD-----------ACLVFDEMPDRDVVAWTAIISGHVQNGESEGG 211
Query: 240 VGLFREMQVMGV---CPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNAL 296
+G +M G P+ T+ AC++LGAL+ G+ L + + S + +++
Sbjct: 212 LGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSM 271
Query: 297 IDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDD 356
++K G+ +A FR++ + SWTS+I LA G E+ +F EM +G+ PD
Sbjct: 272 FSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDG 331
Query: 357 VSFIGVLSACCHSKLVDKGRSY 378
V +++ LV +G+++
Sbjct: 332 VVISCLINELGKMMLVPQGKAF 353
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 177/366 (48%), Gaps = 24/366 (6%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D F + ++I + A + + S ++ M G+ P+ ++ + + GKA
Sbjct: 295 DMFSWTSIIASLARSGDMEES-FDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAF 353
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDE-SPKTDSVTWS 224
HG V++ F D V N+++ MY +A K+F S + + W+
Sbjct: 354 HGFVIRHCFSLDSTVCNSLLSMYCKFELLS-----------VAEKLFCRISEEGNKEAWN 402
Query: 225 AMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWK 284
M+ GY + + + LFR++Q +G+ D + SV+++C+ +GA+ LGK L Y+
Sbjct: 403 TMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKT 462
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLF 344
+ ++ + N+LID++ K GD+ A +F + D+ +++W ++I + +A++LF
Sbjct: 463 SLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADT-NVITWNAMIASYVHCEQSEKAIALF 521
Query: 345 DEMVEQGVEPDDVSFIGVLSACCHSKLVDKGR---SYFNSMEGNFGIVPKIEHYGCMVDL 401
D MV + +P ++ + +L AC ++ +++G+ Y E + ++D+
Sbjct: 522 DRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLS----AALIDM 577
Query: 402 LSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNE--PTHES 459
++ G ++++ + + + + W +I+ G+++ ++ ++ ++ PT +
Sbjct: 578 YAKCGHLEKSRELFDA-GNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPT 636
Query: 460 NYVLLS 465
LLS
Sbjct: 637 FLALLS 642
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 215/384 (55%), Gaps = 19/384 (4%)
Query: 108 FLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHG 167
F +N+LI +A Q + + + LY M GV P++FT+P VLKAC G+ +++G+A+H
Sbjct: 161 FAWNSLISGYAELGQYEDA-MALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHR 219
Query: 168 SVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMI 227
+VK GF D++V N ++ MY A VFD P D V+W++M+
Sbjct: 220 DLVKEGFGYDVYVLNALVVMYAKCGDIVK-----------ARNVFDMIPHKDYVSWNSML 268
Query: 228 GGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIP 287
GY G A+ +FR M G+ PD++ + SVL A + + + G+ L ++ + +
Sbjct: 269 TGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGME 325
Query: 288 KSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEM 347
+ + NALI +++K G + +A +F QM VSW ++I + H + S + F++M
Sbjct: 326 WELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAII---SAHSKNSNGLKYFEQM 382
Query: 348 VEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGF 407
+PD ++F+ VLS C ++ +V+ G F+ M +GI PK+EHY CMV+L RAG
Sbjct: 383 HRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGM 442
Query: 408 VKEALD-FVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSN 466
++EA V+ M +E +W +++ AC+ G +GE ++ L EP +E N+ LL
Sbjct: 443 MEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIR 502
Query: 467 IYAKLRRWEQKTKVREMMDMRGMK 490
IY+K +R E +VR+MM RG++
Sbjct: 503 IYSKAKRAEDVERVRQMMVDRGLE 526
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 140/287 (48%), Gaps = 18/287 (6%)
Query: 149 VLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLA 208
+L+ C L + G VH + + ++L + + ++ +Y +A
Sbjct: 98 LLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAE-----------VA 146
Query: 209 GKVFDESPKTDS--VTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACA 266
+VFD K DS W+++I GYA G A+ L+ +M GV PD T VL AC
Sbjct: 147 HEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACG 206
Query: 267 DLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTS 326
+G++++G+ + + + V + NAL+ M+AKCGD+ KA N+F + VSW S
Sbjct: 207 GIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNS 266
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNF 386
++ G HG EA+ +F MV+ G+EPD V+ VL+ K GR +
Sbjct: 267 MLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFK---HGRQ-LHGWVIRR 322
Query: 387 GIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITA 433
G+ ++ ++ L S+ G + +A F+ +E + + W +II+A
Sbjct: 323 GMEWELSVANALIVLYSKRGQLGQAC-FIFDQMLERDTVSWNAIISA 368
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 197/346 (56%), Gaps = 18/346 (5%)
Query: 211 VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGA 270
+F+ SP D V W+AM+ GY + A+ LFR MQ G+ PD +VS+LT CA GA
Sbjct: 235 LFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGA 294
Query: 271 LELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVG 330
LE GKW+ YI ++ + AL+DM+AKCG ++ A+ +F ++ SWTS+I G
Sbjct: 295 LEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYG 354
Query: 331 LAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVP 390
LAM+G A+ L+ EM GV D ++F+ VL+AC H V +GR F+SM + P
Sbjct: 355 LAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQP 414
Query: 391 KIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQI---IWRSIITACHARGELKLGESIS 447
K EH C++DLL RAG + EA + + M E ++ ++ S+++A G +K+ E ++
Sbjct: 415 KSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVA 474
Query: 448 KELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEF 507
++L + E + S + LL+++YA RWE T VR M G++K PG + IE++ EF
Sbjct: 475 EKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEF 534
Query: 508 VAGDK--SHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDIDEED 551
+ GD SH + +I M+ + T+ ++LD++ ++
Sbjct: 535 IVGDDLLSHPKMDEINSMLHQ-------------TTNLMLDLEHKE 567
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 171/363 (47%), Gaps = 47/363 (12%)
Query: 108 FLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHG 167
++N ++++ A +S + L L+ + G+ P+ FT P VLK+ L + G+ VHG
Sbjct: 12 LMYNKMLKSLAD-GKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHG 70
Query: 168 SVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMI 227
VK G + D +V N+++ MY + KVFDE P+ D V+W+ +I
Sbjct: 71 YAVKAGLEFDSYVSNSLMGMYASLGKIE-----------ITHKVFDEMPQRDVVSWNGLI 119
Query: 228 GGYARRGHSSRAVGLFREM-QVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKI 286
Y G A+G+F+ M Q + DE T+VS L+AC+ L LE+G+ + ++ +
Sbjct: 120 SSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFV-VTEF 178
Query: 287 PKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSL--- 343
SV + NAL+DMF KCG +DKA +F M + WTS++ G GR EA L
Sbjct: 179 EMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFER 238
Query: 344 ---------------------FDEMVE-------QGVEPDDVSFIGVLSACCHSKLVDKG 375
FDE +E G+ PD+ + +L+ C + +++G
Sbjct: 239 SPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQG 298
Query: 376 RSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACH 435
+ + N V K+ +VD+ ++ G ++ AL+ + E + W S+I
Sbjct: 299 KWIHGYINENRVTVDKVVGTA-LVDMYAKCGCIETALEVFYEIK-ERDTASWTSLIYGLA 356
Query: 436 ARG 438
G
Sbjct: 357 MNG 359
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 116/261 (44%), Gaps = 15/261 (5%)
Query: 101 RASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLR 160
R+ D L+ ++ + + + L+L+R M G+ P+ F +L CA L
Sbjct: 238 RSPVKDVVLWTAMMNGYVQFNRFDEA-LELFRCMQTAGIRPDNFVLVSLLTGCAQTGALE 296
Query: 161 LGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDS 220
GK +HG + + D V ++ MY A +VF E + D+
Sbjct: 297 QGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIET-----------ALEVFYEIKERDT 345
Query: 221 VTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELG-KWLES 279
+W+++I G A G S RA+ L+ EM+ +GV D IT V+VLTAC G + G K S
Sbjct: 346 ASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHS 405
Query: 280 YIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSE 339
E + E C+ LID+ + G +D+A L +M + + V L R
Sbjct: 406 MTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYG 465
Query: 340 AVSLFDEMVE--QGVEPDDVS 358
V + + + E + VE D S
Sbjct: 466 NVKIAERVAEKLEKVEVSDSS 486
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 138/439 (31%), Positives = 227/439 (51%), Gaps = 23/439 (5%)
Query: 63 GLINNPLVLTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQ 122
GL ++P ++ S ++ YA + + ++N+++ F +
Sbjct: 268 GLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVA-----VWNSMLSGFLINEE 322
Query: 123 SKSSG---LQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLH 179
++++ LQ+Y++ L + + +T LK C +LRLG VH VV G++ D
Sbjct: 323 NEAALWLLLQIYQSDLCF----DSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYI 378
Query: 180 VQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRA 239
V + ++ ++ A K+F P D + +S +I G + G +S A
Sbjct: 379 VGSILVDLHANVGNIQD-----------AHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLA 427
Query: 240 VGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDM 299
LFRE+ +G+ D+ + ++L C+ L +L GK + K AL+DM
Sbjct: 428 FYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDM 487
Query: 300 FAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSF 359
+ KCG++D + LF M +VSWT +IVG +GR EA F +M+ G+EP+ V+F
Sbjct: 488 YVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTF 547
Query: 360 IGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP 419
+G+LSAC HS L+++ RS +M+ +G+ P +EHY C+VDLL +AG +EA + + MP
Sbjct: 548 LGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMP 607
Query: 420 VEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTK 479
+EP++ IW S++TAC L I+++LL+ P S Y LSN YA L W+Q +K
Sbjct: 608 LEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSK 667
Query: 480 VREMMDMRGMKKVPGSTMI 498
VRE G K+ S +I
Sbjct: 668 VREAAKKLGAKESGMSWII 686
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 109/227 (48%), Gaps = 21/227 (9%)
Query: 150 LKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAG 209
L+ C + + G+++ V+K G ++ + N +I MY A
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSD-----------AH 60
Query: 210 KVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM-QVMGVCPDEITMVSVLTACADL 268
KVFDE + + VTW+ M+ GY G ++A+ L+R M +E +VL AC +
Sbjct: 61 KVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLV 120
Query: 269 GALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVI 328
G ++LG + I + + V L N+++DM+ K G + +A + F+++ + SW ++I
Sbjct: 121 GDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLI 180
Query: 329 VGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKG 375
G G EAV+LF M +P+ VS+ C S VDKG
Sbjct: 181 SGYCKAGLMDEAVTLFHRM----PQPNVVSW-----NCLISGFVDKG 218
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 169/416 (40%), Gaps = 52/416 (12%)
Query: 77 TSSTFNAI--HYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTM 134
+S+++N + Y + L + T R + +N LI F ++ L+ M
Sbjct: 172 SSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRA--LEFLVRM 229
Query: 135 LRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXX 194
R G+V + F P LKAC+ L +GK +H VVK G + + +I MY
Sbjct: 230 QREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSL 289
Query: 195 XXXXXXXXXXXXLAGKVFDE---SPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGV 251
A VF + + + W++M+ G+ + A+ L ++ +
Sbjct: 290 IY-----------AADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDL 338
Query: 252 CPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMN 311
C D T+ L C + L LG + S + + + L+D+ A G++ A
Sbjct: 339 CFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHK 398
Query: 312 LFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSAC----- 366
LF ++ + I++++ +I G G S A LF E+++ G++ D +L C
Sbjct: 399 LFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLAS 458
Query: 367 ------CHSKLVDKGRS------------YFNSMEGNFGIV-------PKIEHYGCMVDL 401
H + KG Y E + G+V + + ++
Sbjct: 459 LGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVG 518
Query: 402 LSRAGFVKEALDFVRTM---PVEPNQIIWRSIITACHARGELKLGESISKELLRNE 454
+ G V+EA + M +EPN++ + +++AC G L+ S + E +++E
Sbjct: 519 FGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARS-TLETMKSE 573
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 166/407 (40%), Gaps = 51/407 (12%)
Query: 82 NAIHYATSF-LFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTML-RYGV 139
N I F L SD S + + T++ + + + ++LYR ML
Sbjct: 45 NVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKA-IELYRRMLDSEEE 103
Query: 140 VPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXX- 198
N+F Y VLKAC + D++LG V+ + K D+ + N+++ MY
Sbjct: 104 AANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANS 163
Query: 199 --------XXXXXXXXLAG-----------KVFDESPKTDSVTWSAMIGGYARRGHSSRA 239
++G +F P+ + V+W+ +I G+ +G S RA
Sbjct: 164 SFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKG-SPRA 222
Query: 240 VGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDM 299
+ MQ G+ D + L AC+ G L +GK L + + S +ALIDM
Sbjct: 223 LEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDM 282
Query: 300 FAKCGDVDKAMNLFRQMD---SCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDD 356
++ CG + A ++F Q + ++ W S++ G ++ A+ L ++ + + D
Sbjct: 283 YSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDS 342
Query: 357 VSFIGVLSAC-----------CHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRA 405
+ G L C HS +V G E ++ IV I +VDL +
Sbjct: 343 YTLSGALKICINYVNLRLGLQVHSLVVVSG------YELDY-IVGSI-----LVDLHANV 390
Query: 406 GFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLR 452
G +++A +P + I + +I C G L + +EL++
Sbjct: 391 GNIQDAHKLFHRLP-NKDIIAFSGLIRGCVKSGFNSLAFYLFRELIK 436
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/449 (29%), Positives = 229/449 (51%), Gaps = 14/449 (3%)
Query: 86 YATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFT 145
YA S F + + D ++T+I + + + L ++ M+ G PN T
Sbjct: 208 YAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAA-AEALLVFNDMMDDGTEPNVAT 266
Query: 146 YPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXX 205
VL+ACA DL G+ H ++ G + ++ V ++ MY
Sbjct: 267 VLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEE--------- 317
Query: 206 XLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMG-VCPDEITMVSVLTA 264
A VF P+ D V+W A+I G+ G + R++ F M + PD I MV VL +
Sbjct: 318 --AYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGS 375
Query: 265 CADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSW 324
C++LG LE K SY+ + + +L++++++CG + A +F + V W
Sbjct: 376 CSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVW 435
Query: 325 TSVIVGLAMHGRGSEAVSLFDEMVEQG-VEPDDVSFIGVLSACCHSKLVDKGRSYFNSME 383
TS+I G +HG+G++A+ F+ MV+ V+P++V+F+ +LSAC H+ L+ +G F M
Sbjct: 436 TSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMV 495
Query: 384 GNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLG 443
++ + P +EHY +VDLL R G + A++ + MP P I +++ AC ++
Sbjct: 496 NDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMA 555
Query: 444 ESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNE 503
E+++K+L E H Y+L+SN+Y WE K+R + RG+KK ++IE+ +
Sbjct: 556 ETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRK 615
Query: 504 MCEFVAGDKSHDQYKQIYEMVDEMGREIK 532
+ FVA D+ H + + +Y ++ E+ +K
Sbjct: 616 VHRFVADDELHPEKEPVYGLLKELDLHMK 644
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 172/333 (51%), Gaps = 16/333 (4%)
Query: 108 FLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHG 167
+ +NTL+++ + Q + L + M R P+ FT P LKAC L ++ G+ +HG
Sbjct: 26 YQWNTLLKSLSREKQWEEV-LYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHG 84
Query: 168 SVVK-FGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAM 226
V K DL+V +++I+MY A ++FDE K D VTWS+M
Sbjct: 85 FVKKDVTLGSDLYVGSSLIYMYIKCGRMIE-----------ALRMFDELEKPDIVTWSSM 133
Query: 227 IGGYARRGHSSRAVGLFREMQVMG-VCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
+ G+ + G +AV FR M + V PD +T++++++AC L LG+ + ++ +
Sbjct: 134 VSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRG 193
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
+ L N+L++ +AK +A+NLF+ + ++SW++VI +G +EA+ +F+
Sbjct: 194 FSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFN 253
Query: 346 EMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRA 405
+M++ G EP+ + + VL AC + +++GR + + G+ +++ +VD+ +
Sbjct: 254 DMMDDGTEPNVATVLCVLQACAAAHDLEQGRKT-HELAIRKGLETEVKVSTALVDMYMKC 312
Query: 406 GFVKEALDFVRTMPVEPNQIIWRSIITACHARG 438
+EA +P + + W ++I+ G
Sbjct: 313 FSPEEAYAVFSRIP-RKDVVSWVALISGFTLNG 344
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/301 (39%), Positives = 184/301 (61%), Gaps = 1/301 (0%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMG-VCPDEITMVSVLTACA 266
A +FD+ P D V +++M+ GY + + A+ +F +M+ + PD+ T+V VL A A
Sbjct: 302 AKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIA 361
Query: 267 DLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTS 326
LG L + YI K+ +L ALIDM++KCG + AM +F +++ +I W +
Sbjct: 362 QLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNA 421
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNF 386
+I GLA+HG G A + ++ ++PDD++F+GVL+AC HS LV +G F M
Sbjct: 422 MIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKH 481
Query: 387 GIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESI 446
I P+++HYGCMVD+LSR+G ++ A + + MPVEPN +IWR+ +TAC E + GE +
Sbjct: 482 KIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELV 541
Query: 447 SKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCE 506
+K L+ + S+YVLLSN+YA W+ +VR MM R ++K+PG + IEL+ + E
Sbjct: 542 AKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHE 601
Query: 507 F 507
F
Sbjct: 602 F 602
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 180/411 (43%), Gaps = 77/411 (18%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D FL+N +I++ +H + + L L ML GV +KF+ VLKAC+ L ++ G +
Sbjct: 85 DPFLWNAVIKSHSHGKDPRQA-LLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQI 143
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
HG + K G DL +QN +I +Y L+ ++FD PK DSV++++
Sbjct: 144 HGFLKKTGLWSDLFLQNCLIGLY-----------LKCGCLGLSRQMFDRMPKRDSVSYNS 192
Query: 226 MIGGYARRGHSSRAVGLFREMQV--------------MGVCPDEITMVSVLTACADLGAL 271
MI GY + G A LF M + D + + S L AD+
Sbjct: 193 MIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLF--ADMPEK 250
Query: 272 ELGKW---LESYIEWKKIPKSVELCN-----------ALIDMFAKCGDVDKAMNLFRQMD 317
+L W ++ Y++ +I + L + +ID +AK G V A LF QM
Sbjct: 251 DLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMP 310
Query: 318 SCTIVSWTSVIVGLAMHGRGSEAVSLFDEM-VEQGVEPDDVSFIGVLSACCH----SKLV 372
+V++ S++ G + EA+ +F +M E + PDD + + VL A SK +
Sbjct: 311 HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAI 370
Query: 373 D-------------------------KGRSYFNSMEGNFGIVPK-IEHYGCMVDLLSRAG 406
D K S ++M GI K I+H+ M+ L+ G
Sbjct: 371 DMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHG 430
Query: 407 FVKEALDF---VRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNE 454
+ A D + + ++P+ I + ++ AC G +K G + EL+R +
Sbjct: 431 LGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEG-LLCFELMRRK 480
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/368 (32%), Positives = 206/368 (55%), Gaps = 11/368 (2%)
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIH 186
+ L+ ML G P++ T VL C+ L GK +HG ++ G D + + + +++
Sbjct: 535 AIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVN 594
Query: 187 MYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM 246
MY LA +V+D P+ D V+ S++I GY++ G LFR+M
Sbjct: 595 MYSKCGSLK-----------LARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDM 643
Query: 247 QVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDV 306
+ G D + S+L A A LG + +YI + + ++L+ M++K G +
Sbjct: 644 VMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSI 703
Query: 307 DKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSAC 366
D F Q++ +++WT++I A HG+ +EA+ +++ M E+G +PD V+F+GVLSAC
Sbjct: 704 DDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSAC 763
Query: 367 CHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQII 426
H LV++ + NSM ++GI P+ HY CMVD L R+G ++EA F+ M ++P+ ++
Sbjct: 764 SHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALV 823
Query: 427 WRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDM 486
W +++ AC GE++LG+ +K+ + EP+ Y+ LSNI A++ W++ + R++M
Sbjct: 824 WGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKG 883
Query: 487 RGMKKVPG 494
G++K PG
Sbjct: 884 TGVQKEPG 891
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 163/365 (44%), Gaps = 52/365 (14%)
Query: 109 LFNTLIRAFAHTPQSKSSG--LQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVH 166
+ N +I +F+ QSK G ++L+ ML+ G+ ++F+ +L L L LGK VH
Sbjct: 420 IVNVMITSFS---QSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVH 473
Query: 167 GSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAM 226
G +K G DL V +++ +Y K+F P D+ W++M
Sbjct: 474 GYTLKSGLVLDLTVGSSLFTLYSKCGSLEESY-----------KLFQGIPFKDNACWASM 522
Query: 227 IGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKI 286
I G+ G+ A+GLF EM G PDE T+ +VLT C+ +L GK + Y I
Sbjct: 523 ISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGI 582
Query: 287 PKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDE 346
K ++L +AL++M++KCG + A ++ ++ VS +S+I G + HG + LF +
Sbjct: 583 DKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRD 642
Query: 347 MVEQGVEPDDVSFIGVLSACC---HSKLVDKGRSYFN---------------SMEGNFGI 388
MV G D + +L A S L + +Y +M FG
Sbjct: 643 MVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGS 702
Query: 389 V------------PKIEHYGCMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRSIITA 433
+ P + + ++ ++ G EAL M +P+++ + +++A
Sbjct: 703 IDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSA 762
Query: 434 CHARG 438
C G
Sbjct: 763 CSHGG 767
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 116/245 (47%), Gaps = 12/245 (4%)
Query: 128 LQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHM 187
L+ + M G N+ +Y V+ AC+ L + V +K G+ V++ +I +
Sbjct: 135 LRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDV 194
Query: 188 YXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQ 247
+ A KVF +S + W+ +I G R + LF EM
Sbjct: 195 FSKNLRFED-----------AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMC 243
Query: 248 VMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVD 307
V PD T SVL ACA L L GK +++ + K + V +C A++D++AKCG +
Sbjct: 244 VGFQKPDSYTYSSVLAACASLEKLRFGKVVQARV-IKCGAEDVFVCTAIVDLYAKCGHMA 302
Query: 308 KAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACC 367
+AM +F ++ + ++VSWT ++ G A+ +F EM GVE ++ + V+SAC
Sbjct: 303 EAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACG 362
Query: 368 HSKLV 372
+V
Sbjct: 363 RPSMV 367
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 154/337 (45%), Gaps = 21/337 (6%)
Query: 126 SGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMI 185
S L++++ M GV N T V+ AC S + VH V K GF D V +I
Sbjct: 334 SALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALI 393
Query: 186 HMYXXXXXXXXXXXXXXXXXXLAGKVF---DESPKTDSVTWSAMIGGYARRGHSSRAVGL 242
MY L+ +VF D+ + + V + MI +++ +A+ L
Sbjct: 394 SMYSKSGDID-----------LSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRL 440
Query: 243 FREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAK 302
F M G+ DE ++ S+L+ L L LGK + Y + + + ++L +++K
Sbjct: 441 FTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSK 497
Query: 303 CGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGV 362
CG ++++ LF+ + W S+I G +G EA+ LF EM++ G PD+ + V
Sbjct: 498 CGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAV 557
Query: 363 LSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEP 422
L+ C + +G+ + GI ++ +V++ S+ G +K A +P E
Sbjct: 558 LTVCSSHPSLPRGKE-IHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP-EL 615
Query: 423 NQIIWRSIITACHARGELKLGESISKELLRNEPTHES 459
+ + S+I+ G ++ G + ++++ + T +S
Sbjct: 616 DPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDS 652
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 109/247 (44%), Gaps = 45/247 (18%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A K+FD P+ D V+ + MI GY + ++ F +M +G +EI+ SV++AC+
Sbjct: 103 AAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSA 162
Query: 268 LGA-----------LELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM 316
L A +++G + +E +ALID+F+K + A +FR
Sbjct: 163 LQAPLFSELVCCHTIKMGYFFYEVVE-----------SALIDVFSKNLRFEDAYKVFRDS 211
Query: 317 DSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGR 376
S + W ++I G + LF EM +PD ++ VL+AC ++K R
Sbjct: 212 LSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS---LEKLR 268
Query: 377 SYFNSMEGNFGIVPKIEHYGC----------MVDLLSRAGFVKEALDFVRTMPVEPNQII 426
FG V + C +VDL ++ G + EA++ +P P+ +
Sbjct: 269 ---------FGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP-NPSVVS 318
Query: 427 WRSIITA 433
W +++
Sbjct: 319 WTVMLSG 325
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 128/374 (34%), Positives = 202/374 (54%), Gaps = 12/374 (3%)
Query: 128 LQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGF-DDDLHVQNTMIH 186
+L+ M G+ + T ++KAC + ++GK VHG ++ F D ++Q ++I
Sbjct: 195 FRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIID 254
Query: 187 MYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM 246
MY A K+F+ S + V W+ +I G+A+ + A LFR+M
Sbjct: 255 MYVKCRLLDN-----------ARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQM 303
Query: 247 QVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDV 306
+ P++ T+ ++L +C+ LG+L GK + Y+ I + IDM+A+CG++
Sbjct: 304 LRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNI 363
Query: 307 DKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSAC 366
A +F M ++SW+S+I ++G EA+ F +M Q V P+ V+F+ +LSAC
Sbjct: 364 QMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSAC 423
Query: 367 CHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQII 426
HS V +G F SM ++G+VP+ EHY CMVDLL RAG + EA F+ MPV+P
Sbjct: 424 SHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASA 483
Query: 427 WRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDM 486
W ++++AC E+ L I+++LL EP S YVLLSNIYA WE VR M +
Sbjct: 484 WGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGI 543
Query: 487 RGMKKVPGSTMIEL 500
+G +K G + E+
Sbjct: 544 KGYRKHVGQSATEV 557
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 153/326 (46%), Gaps = 15/326 (4%)
Query: 110 FNTLIRAFAHTPQS-KSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGS 168
+NT++ ++ + S L LY M R+ + F F +KAC GL L G +HG
Sbjct: 75 WNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGL 134
Query: 169 VVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIG 228
+K G D D +V +++ MY A KVFDE P +SV W ++
Sbjct: 135 AMKNGLDKDDYVAPSLVEMYAQLGTMES-----------AQKVFDEIPVRNSVLWGVLMK 183
Query: 229 GYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESY-IEWKKIP 287
GY + LF M+ G+ D +T++ ++ AC ++ A ++GK + I I
Sbjct: 184 GYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFID 243
Query: 288 KSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEM 347
+S L ++IDM+ KC +D A LF +V WT++I G A R EA LF +M
Sbjct: 244 QSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQM 303
Query: 348 VEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGF 407
+ + + P+ + +L +C + G+S M N GI ++ +D+ +R G
Sbjct: 304 LRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRN-GIEMDAVNFTSFIDMYARCGN 362
Query: 408 VKEALDFVRTMPVEPNQIIWRSIITA 433
++ A MP E N I W S+I A
Sbjct: 363 IQMARTVFDMMP-ERNVISWSSMINA 387
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/380 (20%), Positives = 152/380 (40%), Gaps = 62/380 (16%)
Query: 163 KAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESP--KTDS 220
+ VH V+ GF+D++ + +++ + Y A F+ P K +
Sbjct: 24 QQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLD-----------FATSSFNRIPCWKRNR 72
Query: 221 VTWSAMIGGYARRGHS--SRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLE 278
+W+ ++ GY++ S + L+ M+ D +V + AC LG LE G +
Sbjct: 73 HSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIH 132
Query: 279 SYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGS 338
+ K + +L++M+A+ G ++ A +F ++ V W ++ G + +
Sbjct: 133 GLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDP 192
Query: 339 EAVSLFDEMVEQGVEPDDVSFIGVLSAC-------------------------------- 366
E LF M + G+ D ++ I ++ AC
Sbjct: 193 EVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASI 252
Query: 367 ----CHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVE- 421
+L+D R F + + + + ++ ++ EA D R M E
Sbjct: 253 IDMYVKCRLLDNARKLFET-----SVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRES 307
Query: 422 --PNQIIWRSIITACHARGELKLGESISKELLRNEPTHES-NYVLLSNIYAKLRRWEQKT 478
PNQ +I+ +C + G L+ G+S+ ++RN ++ N+ ++YA+ +
Sbjct: 308 ILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMAR 367
Query: 479 KVREMMDMRGMKKVPGSTMI 498
V +MM R + + S+MI
Sbjct: 368 TVFDMMPERNV--ISWSSMI 385
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 114/325 (35%), Positives = 191/325 (58%), Gaps = 1/325 (0%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A +F E TD TWS M+ YA + A+G+FRE+Q G+ P+ +T++++L CA
Sbjct: 521 AQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQ 580
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSV 327
L +L L + YI + + L L+D++AKCG + A ++F+ +V +T++
Sbjct: 581 LASLHLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAM 639
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG 387
+ G A+HGRG EA+ ++ M E ++PD V +L+ACCH+ L+ G ++S+ G
Sbjct: 640 VAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHG 699
Query: 388 IVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESIS 447
+ P +E Y C VDL++R G + +A FV MPVEPN IW +++ AC + LG S++
Sbjct: 700 MKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVA 759
Query: 448 KELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEF 507
LL+ E N+VL+SN+YA +WE ++R +M + MKK G + +E++ + F
Sbjct: 760 NHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVF 819
Query: 508 VAGDKSHDQYKQIYEMVDEMGREIK 532
V+GD SH + I+++V+ + ++K
Sbjct: 820 VSGDCSHPRRDSIFDLVNALYLQMK 844
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 112/241 (46%), Gaps = 15/241 (6%)
Query: 141 PNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXX 200
P+ T+ VL C L D GK++H ++K G + D V N ++ MY
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPD--- 176
Query: 201 XXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVS 260
A FD D V+W+A+I G++ + A F M P+ T+ +
Sbjct: 177 -------AYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIAN 229
Query: 261 VLTACADLG---ALELGKWLESYIEWKK-IPKSVELCNALIDMFAKCGDVDKAMNLFRQM 316
VL CA + A G+ + SY+ + + V +CN+L+ + + G +++A +LF +M
Sbjct: 230 VLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRM 289
Query: 317 DSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQG-VEPDDVSFIGVLSACCHSKLVDKG 375
S +VSW VI G A + +A LF +V +G V PD V+ I +L C + G
Sbjct: 290 GSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASG 349
Query: 376 R 376
+
Sbjct: 350 K 350
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 174/414 (42%), Gaps = 33/414 (7%)
Query: 90 FLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFV 149
F+F D T + D +N +I F+ + + + ML+ PN T V
Sbjct: 172 FIFPDAYTAFDGIADKDVVSWNAIIAGFSEN-NMMADAFRSFCLMLKEPTEPNYATIANV 230
Query: 150 LKACAGLSD---LRLGKAVHGSVVKFGF-DDDLHVQNTMIHMYXXXXXXXXXXXXXXXXX 205
L CA + R G+ +H VV+ + + V N+++ Y
Sbjct: 231 LPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEE--------- 281
Query: 206 XLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMG-VCPDEITMVSVLTA 264
A +F D V+W+ +I GYA +A LF + G V PD +T++S+L
Sbjct: 282 --AASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPV 339
Query: 265 CADLGALELGKWLESYI-EWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVS 323
CA L L GK + SYI + + + NALI +A+ GD A F M + I+S
Sbjct: 340 CAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIIS 399
Query: 324 WTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSME 383
W +++ A + + ++L ++ + + D V+ + +L C + + + K + +
Sbjct: 400 WNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKE-VHGYS 458
Query: 384 GNFGIV-----PKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARG 438
G++ PK+ + ++D ++ G V+ A + + + S+++ G
Sbjct: 459 VKAGLLHDEEEPKLGN--ALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLS-----G 511
Query: 439 ELKLGESISKELLRNE--PTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMK 490
+ G ++L E T + + L+ IYA+ + V + RGM+
Sbjct: 512 YVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMR 565
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 146/367 (39%), Gaps = 58/367 (15%)
Query: 149 VLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLA 208
V+KACA +SDL G+A+HG V K G V ++++MY
Sbjct: 27 VVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDD-----------C 75
Query: 209 GKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVC-PDEITMVSVLTACAD 267
K+F + D V W+ ++ G + + F+ M P +T VL C
Sbjct: 76 QKMFRQMDSLDPVVWNIVLTGLSVSC-GRETMRFFKAMHFADEPKPSSVTFAIVLPLCVR 134
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDV-DKAMNLFRQMDSCTIVSWTS 326
LG GK + SYI + K + NAL+ M+AK G + A F + +VSW +
Sbjct: 135 LGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNA 194
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACC--------------HSKLV 372
+I G + + ++A F M+++ EP+ + VL C HS +V
Sbjct: 195 IIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVV 254
Query: 373 DKGRSYF-------NSMEGNFGIVPKIEHYGCMV------DLLSR----AGFVKEA---- 411
RS+ NS+ + V +IE + DL+S AG+
Sbjct: 255 Q--RSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFK 312
Query: 412 -----LDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYV--LL 464
+ V V P+ + SI+ C +L G+ I +LR+ E V L
Sbjct: 313 AFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNAL 372
Query: 465 SNIYAKL 471
+ YA+
Sbjct: 373 ISFYARF 379
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 105/233 (45%), Gaps = 21/233 (9%)
Query: 85 HYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKF 144
H LF++ TT D ++ ++R +A + + + ++R + G+ PN
Sbjct: 518 HDDAQMLFTEMSTT-------DLTTWSLMVRIYAESC-CPNEAIGVFREIQARGMRPNTV 569
Query: 145 TYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXX 204
T +L CA L+ L L + HG +++ G D+ ++ T++ +Y
Sbjct: 570 TIMNLLPVCAQLASLHLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKH-------- 620
Query: 205 XXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTA 264
A VF + D V ++AM+ GYA G A+ ++ M + PD + + ++LTA
Sbjct: 621 ---AYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTA 677
Query: 265 CADLGALELG-KWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM 316
C G ++ G + +S + ++E +D+ A+ G +D A + QM
Sbjct: 678 CCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQM 730
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 21/227 (9%)
Query: 250 GVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKA 309
G D + V+ ACA + L G+ L + E+ ++++M+AKC +D
Sbjct: 16 GFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDC 75
Query: 310 MNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEM-VEQGVEPDDVSFIGVLSACCH 368
+FRQMDS V W V+ GL++ G E + F M +P V+F VL C
Sbjct: 76 QKMFRQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSSVTFAIVLPLC-- 132
Query: 369 SKLVDKGRSYFNSMEGNFGIVPKIEH----YGCMVDLLSRAGFV----KEALDFVRTMPV 420
V G SY ++ I +E +V + ++ GF+ A D +
Sbjct: 133 ---VRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGI----A 185
Query: 421 EPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNI 467
+ + + W +II A + + S L+ EPT E NY ++N+
Sbjct: 186 DKDVVSWNAII-AGFSENNMMADAFRSFCLMLKEPT-EPNYATIANV 230
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 232 bits (591), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 219/422 (51%), Gaps = 15/422 (3%)
Query: 110 FNTLIRAFAH----TPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
+N +I F T ++ S +L+ M R G+ P+ T+ VLKAC+ L G+ +
Sbjct: 321 YNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQI 380
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H + K F D + + +I +Y + F + K D +W++
Sbjct: 381 HALICKNNFQSDEFIGSALIELYALMGSTEDGM-----------QCFASTSKQDIASWTS 429
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
MI + + A LFR++ + P+E T+ +++ACAD AL G+ ++ Y
Sbjct: 430 MIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSG 489
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
I + + I M+AK G++ A +F ++ + + +++++I LA HG +EA+++F+
Sbjct: 490 IDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFE 549
Query: 346 EMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRA 405
M G++P+ +F+GVL ACCH LV +G YF M+ ++ I P +H+ C+VDLL R
Sbjct: 550 SMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRT 609
Query: 406 GFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLS 465
G + +A + + + + + + WR+++++C + +G+ +++ L+ EP +YVLL
Sbjct: 610 GRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLH 669
Query: 466 NIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVD 525
NIY +VRE+M RG+KK P + I + N+ F D SH + IY M++
Sbjct: 670 NIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLE 729
Query: 526 EM 527
M
Sbjct: 730 TM 731
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 142/294 (48%), Gaps = 22/294 (7%)
Query: 146 YPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXX 205
Y + + A + LGK HG ++K + L++ N +++MY
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELG---------- 99
Query: 206 XLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTAC 265
A ++FD P+ + ++++++I GY + G +A+ LF E + + D+ T L C
Sbjct: 100 -FARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFC 158
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
+ L+LG+ L + + + V L N LIDM++KCG +D+AM+LF + D VSW
Sbjct: 159 GERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWN 218
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACC---HSKLVDKGRS---YF 379
S+I G G E ++L +M G+ + VL ACC + ++KG + Y
Sbjct: 219 SLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYT 278
Query: 380 NSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITA 433
+ F IV + ++D+ ++ G +KEA+ MP N + + ++I+
Sbjct: 279 AKLGMEFDIVVRT----ALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAMISG 327
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 127/275 (46%), Gaps = 20/275 (7%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
FN+LI + + + ++L+ + +KFTY L C DL LG+ +HG V
Sbjct: 116 FNSLISGYTQMGFYEQA-MELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLV 174
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
V G + + N +I MY A +FD + D V+W+++I G
Sbjct: 175 VVNGLSQQVFLINVLIDMYSKCGKLDQ-----------AMSLFDRCDERDQVSWNSLISG 223
Query: 230 YARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACA---DLGALELGKWLESYIEWKKI 286
Y R G + + L +M G+ + SVL AC + G +E G + Y +
Sbjct: 224 YVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGM 283
Query: 287 PKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGR-----GSEAV 341
+ + AL+DM+AK G + +A+ LF M S +V++ ++I G SEA
Sbjct: 284 EFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAF 343
Query: 342 SLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGR 376
LF +M +G+EP +F VL AC +K ++ GR
Sbjct: 344 KLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGR 378
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 231 bits (590), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/293 (39%), Positives = 182/293 (62%), Gaps = 3/293 (1%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A +F+E+ D WSA+I GYA+ G + A +F EM V PDE MV +++AC+
Sbjct: 257 ARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQ 316
Query: 268 LGALELGKWLESYIEWKKIPK--SVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
+G EL + ++SY+ +++ K S + ALIDM AKCG +D+A LF +M +VS+
Sbjct: 317 MGCFELCEKVDSYLH-QRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYC 375
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
S++ G+A+HG GSEA+ LF++MV++G+ PD+V+F +L C S+LV++G YF M
Sbjct: 376 SMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKK 435
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGES 445
+ I+ +HY C+V+LLSR G +KEA + +++MP E + W S++ C G ++ E
Sbjct: 436 YSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEV 495
Query: 446 ISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMI 498
+++ L EP +YVLLSNIYA L RW +R+ M+ G+ K+ G + I
Sbjct: 496 VARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 162/327 (49%), Gaps = 35/327 (10%)
Query: 101 RASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVV-PNKFTYPFVLKACAGLSDL 159
R S +L+N LI+ +++ + L R M+R G+ P+++T+P V+K C+ +
Sbjct: 68 RVPSPGTYLWNHLIKGYSNKFLFFETVSILMR-MMRTGLARPDEYTFPLVMKVCSNNGQV 126
Query: 160 RLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTD 219
R+G +VHG V++ GFD D+ V + + Y A KVF E P+ +
Sbjct: 127 RVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFS-----------ARKVFGEMPERN 175
Query: 220 SVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLES 279
+V+W+A++ Y + G A +F M P+ + A D G ++ G + +
Sbjct: 176 AVSWTALVVAYVKSGELEEAKSMFDLM------PER--NLGSWNALVD-GLVKSGDLVNA 226
Query: 280 YIEWKKIPK-SVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGS 338
+ ++PK + ++ID +AK GD+ A +LF + + +W+++I+G A +G+ +
Sbjct: 227 KKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPN 286
Query: 339 EAVSLFDEMVEQGVEPDDVSFIGVLSACCHS---KLVDKGRSYFNSMEGNFG---IVPKI 392
EA +F EM + V+PD+ +G++SAC +L +K SY + F +VP
Sbjct: 287 EAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVP-- 344
Query: 393 EHYGCMVDLLSRAGFVKEALDFVRTMP 419
++D+ ++ G + A MP
Sbjct: 345 ----ALIDMNAKCGHMDRAAKLFEEMP 367
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 218/421 (51%), Gaps = 16/421 (3%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D+ L+N L+ ++ + + + L ++ M GV ++ T VL A D+ G+++
Sbjct: 226 DSVLWNALVNGYSQIFRFEDA-LLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSI 284
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
HG VK G D+ V N +I MY A +F+ + D TW++
Sbjct: 285 HGLAVKTGSGSDIVVSNALIDMYGKSKWLEE-----------ANSIFEAMDERDLFTWNS 333
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
++ + G + LF M G+ PD +T+ +VL C L +L G+ + Y+
Sbjct: 334 VLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSG 393
Query: 286 I---PKSVELC-NALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAV 341
+ S E N+L+DM+ KCGD+ A +F M SW +I G + G A+
Sbjct: 394 LLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELAL 453
Query: 342 SLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDL 401
+F M GV+PD+++F+G+L AC HS +++GR++ ME + I+P +HY C++D+
Sbjct: 454 DMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDM 513
Query: 402 LSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNY 461
L RA ++EA + + P+ N ++WRSI+++C G L K L EP H Y
Sbjct: 514 LGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGY 573
Query: 462 VLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIY 521
VL+SN+Y + ++E+ VR+ M + +KK PG + I L N + F G+++H ++K I+
Sbjct: 574 VLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIH 633
Query: 522 E 522
+
Sbjct: 634 D 634
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 135/284 (47%), Gaps = 18/284 (6%)
Query: 102 ASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAG--LSDL 159
S D F +N LI F S ++ YR M G++P+K+T+P +LK LSD+
Sbjct: 121 GSERDVFGYNALISGFV-VNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV 179
Query: 160 RLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESP-KT 218
K VHG K GFD D +V + ++ Y A KVFDE P +
Sbjct: 180 ---KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVED-----------AQKVFDELPDRD 225
Query: 219 DSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLE 278
DSV W+A++ GY++ A+ +F +M+ GV T+ SVL+A G ++ G+ +
Sbjct: 226 DSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIH 285
Query: 279 SYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGS 338
+ + NALIDM+ K +++A ++F MD + +W SV+ G
Sbjct: 286 GLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHD 345
Query: 339 EAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM 382
++LF+ M+ G+ PD V+ VL C + +GR M
Sbjct: 346 GTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYM 389
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 125/284 (44%), Gaps = 17/284 (5%)
Query: 150 LKACAGLSDLRLGKAVHGSVVKFGF-DDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLA 208
L+ CA D G+ +HG +V+ GF DD ++++MY A
Sbjct: 67 LQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRR-----------A 115
Query: 209 GKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADL 268
VF S + D ++A+I G+ G A+ +REM+ G+ PD+ T S+L +D
Sbjct: 116 VLVFGGSER-DVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDA 173
Query: 269 GALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM-DSCTIVSWTSV 327
L K + + + L+ ++K V+ A +F ++ D V W ++
Sbjct: 174 MELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNAL 233
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG 387
+ G + R +A+ +F +M E+GV + VLSA S +D GRS + + G
Sbjct: 234 VNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRS-IHGLAVKTG 292
Query: 388 IVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSII 431
I ++D+ ++ +++EA M E + W S++
Sbjct: 293 SGSDIVVSNALIDMYGKSKWLEEANSIFEAMD-ERDLFTWNSVL 335
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/368 (34%), Positives = 200/368 (54%), Gaps = 14/368 (3%)
Query: 104 SFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGK 163
S DA F+TL+ + + K+ L L+R M + VV N T L A + L DL +
Sbjct: 189 SVDAVTFSTLMNGYLQVSK-KALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAE 247
Query: 164 AVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTW 223
+ H +K G D DLH+ +I MY A ++FD + + D VTW
Sbjct: 248 SAHVLCIKIGLDLDLHLITALIGMYGKTGGISS-----------ARRIFDCAIRKDVVTW 296
Query: 224 SAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEW 283
+ MI YA+ G V L R+M+ + P+ T V +L++CA A +G+ + +E
Sbjct: 297 NCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEE 356
Query: 284 KKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSL 343
++I L AL+DM+AK G ++KA+ +F +M + SWT++I G HG EAV+L
Sbjct: 357 ERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTL 416
Query: 344 FDEMVEQG--VEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDL 401
F++M E+ V P++++F+ VL+AC H LV +G F M + PK+EHYGC+VDL
Sbjct: 417 FNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDL 476
Query: 402 LSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNY 461
L RAG ++EA + +R +P+ + WR+++ AC G LGES+ L TH ++
Sbjct: 477 LGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADA 536
Query: 462 VLLSNIYA 469
+LL+ +A
Sbjct: 537 ILLAGTHA 544
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 183/377 (48%), Gaps = 24/377 (6%)
Query: 63 GLINNPLVLTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQ 122
GL + ++K A SS + I YA+S S+ + F+FNT+IR ++ + +
Sbjct: 55 GLDKDDFAVSKLLAFSSVLD-IRYASSIF--------EHVSNTNLFMFNTMIRGYSISDE 105
Query: 123 SKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQN 182
+ + ++ + G+ ++F++ LK+C+ + +G+ +HG ++ GF ++N
Sbjct: 106 PERA-FSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRN 164
Query: 183 TMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKT-DSVTWSAMIGGYARRGHSSRAVG 241
+IH Y A KVFDE P++ D+VT+S ++ GY + + A+
Sbjct: 165 ALIHFYCVCGKISD-----------ARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALD 213
Query: 242 LFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFA 301
LFR M+ V + T++S L+A +DLG L + + + L ALI M+
Sbjct: 214 LFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYG 273
Query: 302 KCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIG 361
K G + A +F +V+W +I A G E V L +M + ++P+ +F+G
Sbjct: 274 KTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVG 333
Query: 362 VLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVE 421
+LS+C +S+ GR+ + +E + I +VD+ ++ G +++A++ M +
Sbjct: 334 LLSSCAYSEAAFVGRTVADLLEEERIALDAILGTA-LVDMYAKVGLLEKAVEIFNRMK-D 391
Query: 422 PNQIIWRSIITACHARG 438
+ W ++I+ A G
Sbjct: 392 KDVKSWTAMISGYGAHG 408
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 145/363 (39%), Gaps = 51/363 (14%)
Query: 165 VHGSVVKFGFD-DDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTW 223
+HG +VK G D DD V + A +F+ T+ +
Sbjct: 47 IHGYMVKTGLDKDDFAVSKLL-------------AFSSVLDIRYASSIFEHVSNTNLFMF 93
Query: 224 SAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEW 283
+ MI GY+ RA +F +++ G+ D + ++ L +C+ + +G+ L
Sbjct: 94 NTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALR 153
Query: 284 KKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM-DSCTIVSWTSVIVGLAMHGRGSEAVS 342
+L NALI + CG + A +F +M S V++++++ G + + A+
Sbjct: 154 SGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALD 213
Query: 343 LFDEMVEQGVEPDDVSFIGVLSAC---------------CHSKLVDKGRSYFNSMEGNFG 387
LF M + V + + + LSA C +D ++ G +G
Sbjct: 214 LFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYG 273
Query: 388 ---------------IVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVE---PNQIIWRS 429
I + + CM+D ++ G ++E + +R M E PN +
Sbjct: 274 KTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVG 333
Query: 430 IITACHARGELKLGESISKELLRNEPTHESNYV--LLSNIYAKLRRWEQKTKVREMMDMR 487
++++C +G +++ +LL E + L ++YAK+ E+ ++ M +
Sbjct: 334 LLSSCAYSEAAFVGRTVA-DLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDK 392
Query: 488 GMK 490
+K
Sbjct: 393 DVK 395
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/404 (32%), Positives = 208/404 (51%), Gaps = 16/404 (3%)
Query: 101 RASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLR 160
R D + +I + +++ L+L R M GV PN T ++ C +
Sbjct: 278 RMERRDVITWTCMINGYTEDGDVENA-LELCRLMQFEGVRPNAVTIASLVSVCGDALKVN 336
Query: 161 LGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDS 220
GK +HG V+ D+ ++ ++I MY L +VF + K +
Sbjct: 337 DGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVD-----------LCFRVFSGASKYHT 385
Query: 221 VTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESY 280
WSA+I G + S A+GLF+ M+ V P+ T+ S+L A A L L + Y
Sbjct: 386 GPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCY 445
Query: 281 IEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD----SCTIVSWTSVIVGLAMHGR 336
+ S++ L+ +++KCG ++ A +F + S +V W ++I G MHG
Sbjct: 446 LTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
Query: 337 GSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYG 396
G A+ +F EMV GV P++++F L+AC HS LV++G + F M ++ + + HY
Sbjct: 506 GHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYT 565
Query: 397 CMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPT 456
C+VDLL RAG + EA + + T+P EP +W +++ AC ++LGE + +L EP
Sbjct: 566 CIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPE 625
Query: 457 HESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIEL 500
+ NYVLL+NIYA L RW+ KVR MM+ G++K PG + IE+
Sbjct: 626 NTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 157/309 (50%), Gaps = 22/309 (7%)
Query: 70 VLTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQ 129
+L+ + T + I YA LF + P ++ + +N +IR + + +
Sbjct: 51 ILSTLSVTYALCGHITYARK-LFEEMPQSSLLS-------YNIVIRMYVREGLYHDA-IS 101
Query: 130 LYRTMLRYGV--VPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHM 187
++ M+ GV VP+ +TYPFV KA L ++LG VHG +++ F D +VQN ++ M
Sbjct: 102 VFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAM 161
Query: 188 YXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQ 247
Y +A VFD D ++W+ MI GY R G+ + A+ +F M
Sbjct: 162 YMNFGKVE-----------MARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMV 210
Query: 248 VMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVD 307
V D T+VS+L C L LE+G+ + +E K++ +E+ NAL++M+ KCG +D
Sbjct: 211 NESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMD 270
Query: 308 KAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACC 367
+A +F +M+ +++WT +I G G A+ L M +GV P+ V+ ++S C
Sbjct: 271 EARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCG 330
Query: 368 HSKLVDKGR 376
+ V+ G+
Sbjct: 331 DALKVNDGK 339
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 159/355 (44%), Gaps = 18/355 (5%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +NT+I + + + L ++ M+ V + T +L C L DL +G+ V
Sbjct: 182 DVISWNTMISGY-YRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNV 240
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H V + D + V+N +++MY A VFD + D +TW+
Sbjct: 241 HKLVEEKRLGDKIEVKNALVNMYLKCGRMDE-----------ARFVFDRMERRDVITWTC 289
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
MI GY G A+ L R MQ GV P+ +T+ S+++ C D + GK L + ++
Sbjct: 290 MINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQ 349
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
+ + + +LI M+AKC VD +F W+++I G + S+A+ LF
Sbjct: 350 VYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFK 409
Query: 346 EMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSY-FNSMEGNFGIVPKIEHYGCMVDLLSR 404
M + VEP+ + +L A ++ L D ++ + G + ++ +V + S+
Sbjct: 410 RMRREDVEPNIATLNSLLPA--YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSK 467
Query: 405 AGFVKEA---LDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPT 456
G ++ A + ++ + ++W ++I+ G+ + E++R+ T
Sbjct: 468 CGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVT 522
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 142/307 (46%), Gaps = 46/307 (14%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGV--CPDEITMVSVLTAC 265
A K+F+E P++ ++++ +I Y R G A+ +F M GV PD T V A
Sbjct: 68 ARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAA 127
Query: 266 ADLGALELGKWLESYI--EWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVS 323
+L +++LG + I W K V+ NAL+ M+ G V+ A ++F M + ++S
Sbjct: 128 GELKSMKLGLVVHGRILRSWFGRDKYVQ--NALLAMYMNFGKVEMARDVFDVMKNRDVIS 185
Query: 324 WTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSME 383
W ++I G +G ++A+ +FD MV + V+ D + + +L C H K ++ GR+ +E
Sbjct: 186 WNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVE 245
Query: 384 GNFGIVPKIE-------------------------------HYGCMVDLLSRAGFVKEAL 412
+ KIE + CM++ + G V+ AL
Sbjct: 246 EK-RLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENAL 304
Query: 413 DFVRTMPVE---PNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVL---LSN 466
+ R M E PN + S+++ C ++ G+ + +R + S+ ++ L +
Sbjct: 305 ELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVY--SDIIIETSLIS 362
Query: 467 IYAKLRR 473
+YAK +R
Sbjct: 363 MYAKCKR 369
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/380 (32%), Positives = 206/380 (54%), Gaps = 14/380 (3%)
Query: 122 QSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLS-DLRLGKAVHGSVVKFGFDDDLHV 180
Q+ G+ L+R M R + PN+ T VL AC L+ L K +HG + G D +
Sbjct: 230 QNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERL 289
Query: 181 QNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAV 240
+ MY L+ +F+ S D V WS+MI GYA G S +
Sbjct: 290 TAAFMTMYCRCGNVS-----------LSRVLFETSKVRDVVMWSSMISGYAETGDCSEVM 338
Query: 241 GLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMF 300
L +M+ G+ + +T++++++AC + L + S I + L NALIDM+
Sbjct: 339 NLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMY 398
Query: 301 AKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFI 360
AKCG + A +F ++ +VSW+S+I +HG GSEA+ +F M++ G E DD++F+
Sbjct: 399 AKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFL 458
Query: 361 GVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPV 420
+LSAC H+ LV++ ++ F + G + + +EHY C ++LL R G + +A + MP+
Sbjct: 459 AILSACNHAGLVEEAQTIF-TQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPM 517
Query: 421 EPNQIIWRSIITACHARGELKL-GESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTK 479
+P+ IW S+++AC G L + G+ I+ EL+++EP + +NYVLLS I+ + + +
Sbjct: 518 KPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEE 577
Query: 480 VREMMDMRGMKKVPGSTMIE 499
VR +M R + K G + IE
Sbjct: 578 VRRVMQRRKLNKCYGFSKIE 597
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 160/374 (42%), Gaps = 55/374 (14%)
Query: 120 TPQSKSSGLQLYRTMLRYGVVPNKFT--YPFVLKACAGLSD-LRLGKAVHGSVVKFGFDD 176
+ Q L+LY+ + + + N FT P V+KACA + LG +H +K G D
Sbjct: 22 SDQFYDEALRLYKLKI-HSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADC 80
Query: 177 DLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHS 236
D V N++I MY KVFDE D+V++ ++I + G
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVR-----------KVFDEMLHRDTVSYCSIINSCCQDGLL 129
Query: 237 SRAVGLFREMQVMGVCPDEITMVSVLTACADLGAL-ELGKWLESYIEW-KKIPKSVELCN 294
A+ L +EM G P + S+L C +G+ ++ + + + +++ +SV L
Sbjct: 130 YEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLST 189
Query: 295 ALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEP 354
AL+DM+ K D A ++F QM+ VSWT++I G + V LF M + + P
Sbjct: 190 ALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRP 249
Query: 355 DDVSFIGVLSAC---------------------CHSKLVDKGRSYFNSME---GNFGI-- 388
+ V+ + VL AC CH+ ++ + F +M GN +
Sbjct: 250 NRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHAD--ERLTAAFMTMYCRCGNVSLSR 307
Query: 389 -------VPKIEHYGCMVDLLSRAGFVKEALDFVRTM---PVEPNQIIWRSIITACHARG 438
V + + M+ + G E ++ + M +E N + +I++AC
Sbjct: 308 VLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNST 367
Query: 439 ELKLGESISKELLR 452
L ++ ++L+
Sbjct: 368 LLSFASTVHSQILK 381
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 132/464 (28%), Positives = 225/464 (48%), Gaps = 44/464 (9%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYG-VVPNKFTYPFVLKACAGLSDLRLGKA 164
D +N++I ++ + + ++Y+ ML PN T V +AC SDL G
Sbjct: 197 DVVSWNSMISGYSQSGSFEDCK-KMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLE 255
Query: 165 VHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWS 224
VH +++ DL + N +I Y A +FDE + DSVT+
Sbjct: 256 VHKKMIENHIQMDLSLCNAVIGFYAKCGSLD-----------YARALFDEMSEKDSVTYG 304
Query: 225 AMIGGYARRGHSSRAVGLFREMQVMGVC-------------------------------P 253
A+I GY G A+ LF EM+ +G+ P
Sbjct: 305 AIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRP 364
Query: 254 DEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLF 313
+ +T+ S+L + L+ GK + ++ ++ + ++ID +AK G + A +F
Sbjct: 365 NTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVF 424
Query: 314 RQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVD 373
++++WT++I A+HG A SLFD+M G +PDDV+ VLSA HS D
Sbjct: 425 DNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSD 484
Query: 374 KGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITA 433
+ F+SM + I P +EHY CMV +LSRAG + +A++F+ MP++P +W +++
Sbjct: 485 MAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNG 544
Query: 434 CHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVP 493
G+L++ L EP + NY +++N+Y + RWE+ VR M G+KK+P
Sbjct: 545 ASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIP 604
Query: 494 GSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYV 537
G++ IE + F+A D S ++ K++YE+++ + + Y+
Sbjct: 605 GTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDKEYI 648
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 116/240 (48%), Gaps = 15/240 (6%)
Query: 141 PNKFTYPFVLKACAGLSDLRLG---KAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXX 197
P+ + VLKA +G D LG + VHG V++ GFD D+ V N MI Y
Sbjct: 127 PDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIES- 185
Query: 198 XXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMG-VCPDEI 256
A KVFDE + D V+W++MI GY++ G +++ M P+ +
Sbjct: 186 ----------ARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGV 235
Query: 257 TMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM 316
T++SV AC L G + + I + LCNA+I +AKCG +D A LF +M
Sbjct: 236 TVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEM 295
Query: 317 DSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGR 376
V++ ++I G HG EA++LF EM G+ + G++ H ++++ R
Sbjct: 296 SEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFR 355
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 222 bits (565), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 112/278 (40%), Positives = 164/278 (58%), Gaps = 1/278 (0%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGV-CPDEITMVSVLTACA 266
A +VFD P D V+W+AM+ YA G + + +F +M PD T+VSVL+ACA
Sbjct: 256 AKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACA 315
Query: 267 DLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTS 326
LG+L G+W+ YI+ I L AL+DM++KCG +DKA+ +FR + +W S
Sbjct: 316 SLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNS 375
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNF 386
+I L++HG G +A+ +F EMV +G +P+ ++FIGVLSAC H ++D+ R F M +
Sbjct: 376 IISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVY 435
Query: 387 GIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESI 446
+ P IEHYGCMVDLL R G ++EA + V +P + I+ S++ AC G+L+ E I
Sbjct: 436 RVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERI 495
Query: 447 SKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMM 484
+ LL S Y +SN+YA RWE+ R M
Sbjct: 496 ANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNM 533
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 166/371 (44%), Gaps = 66/371 (17%)
Query: 71 LTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQL 130
L FAAT+ + YA S L R S + F N++IRA+A++ + L +
Sbjct: 77 LVAFAATNPEPKTVSYAHSIL--------NRIGSPNGFTHNSVIRAYANS-STPEVALTV 127
Query: 131 YRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXX 190
+R ML V P+K+++ FVLKACA G+ +HG +K G D+ V+NT++++Y
Sbjct: 128 FREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVY-- 185
Query: 191 XXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMG 250
+A KV D P D+V+W++++ Y +G A LF EM+
Sbjct: 186 ---------GRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEME--- 233
Query: 251 VCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAM 310
++VE N +I +A G V +A
Sbjct: 234 ------------------------------------ERNVESWNFMISGYAAAGLVKEAK 257
Query: 311 NLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVE-PDDVSFIGVLSACCHS 369
+F M +VSW +++ A G +E + +F++M++ E PD + + VLSAC
Sbjct: 258 EVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASL 317
Query: 370 KLVDKGRSYFNSMEGNFGIVPKIEHY--GCMVDLLSRAGFVKEALDFVRTMPVEPNQIIW 427
+ +G + + GI +IE + +VD+ S+ G + +AL+ R + + W
Sbjct: 318 GSLSQGE-WVHVYIDKHGI--EIEGFLATALVDMYSKCGKIDKALEVFRATS-KRDVSTW 373
Query: 428 RSIITACHARG 438
SII+ G
Sbjct: 374 NSIISDLSVHG 384
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 13/241 (5%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A + + + T +++I YA A+ +FREM + V PD+ + VL ACA
Sbjct: 93 AHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAA 152
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSV 327
E G+ + + V + N L++++ + G + A + +M VSW S+
Sbjct: 153 FCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSL 212
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG 387
+ G EA +LFDEM E+ VE S+ ++S + LV + + F+SM
Sbjct: 213 LSAYLEKGLVDEARALFDEMEERNVE----SWNFMISGYAAAGLVKEAKEVFDSMP---- 264
Query: 388 IVPKIEHYGCMVDLLSRAGFVKEALDFVRTM----PVEPNQIIWRSIITACHARGELKLG 443
V + + MV + G E L+ M +P+ S+++AC + G L G
Sbjct: 265 -VRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQG 323
Query: 444 E 444
E
Sbjct: 324 E 324
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 221 bits (564), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 129/416 (31%), Positives = 212/416 (50%), Gaps = 22/416 (5%)
Query: 101 RASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLR 160
R S+ L+N++I + K L L+ M R + T V+ AC GL L
Sbjct: 278 RKSNRCVILWNSMISGYIANNM-KMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLE 335
Query: 161 LGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXL------------- 207
GK +H KFG DD+ V +T++ MY
Sbjct: 336 TGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYF 395
Query: 208 -------AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVS 260
A +VF+ ++W++M G+++ G + + F +M + + DE+++ S
Sbjct: 396 SCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSS 455
Query: 261 VLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCT 320
V++ACA + +LELG+ + + + + ++LID++ KCG V+ +F M
Sbjct: 456 VISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSD 515
Query: 321 IVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFN 380
V W S+I G A +G+G EA+ LF +M G+ P ++F+ VL+AC + LV++GR F
Sbjct: 516 EVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFE 575
Query: 381 SMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGEL 440
SM+ + G VP EH+ CMVDLL+RAG+V+EA++ V MP + + +W SI+ C A G
Sbjct: 576 SMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYK 635
Query: 441 KLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGST 496
+G+ +++++ EP + YV LS I+A WE VR++M + K PGS+
Sbjct: 636 AMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 116/237 (48%), Gaps = 38/237 (16%)
Query: 207 LAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACA 266
+A ++F+ P+ D VT ++++ GY G++ A+ LF+E+ D IT+ +VL ACA
Sbjct: 142 VARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNF---SADAITLTTVLKACA 198
Query: 267 DLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGD--------------------- 305
+L AL+ GK + + I + ++ ++L++++AKCGD
Sbjct: 199 ELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSA 258
Query: 306 ----------VDKAMNLF-RQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEP 354
V+++ LF R+ + C I+ W S+I G + EA+ LF+EM + E
Sbjct: 259 LISGYANCGRVNESRGLFDRKSNRCVIL-WNSMISGYIANNMKMEALVLFNEMRNETRE- 316
Query: 355 DDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEA 411
D + V++AC ++ G+ + FG++ I ++D+ S+ G EA
Sbjct: 317 DSRTLAAVINACIGLGFLETGKQ-MHCHACKFGLIDDIVVASTLLDMYSKCGSPMEA 372
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 12/183 (6%)
Query: 290 VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVE 349
V + N L+ M+++ G + A NLF +M SW ++I G G ++ FD M E
Sbjct: 62 VIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPE 121
Query: 350 QGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVK 409
+ D S+ V+S + + R FN+M + +G +++ G+ +
Sbjct: 122 R----DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILN-----GYAE 172
Query: 410 EALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRN--EPTHESNYVLLSNI 467
EAL + + + I +++ AC LK G+ I ++L E + N L+ N+
Sbjct: 173 EALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLV-NV 231
Query: 468 YAK 470
YAK
Sbjct: 232 YAK 234
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 221 bits (564), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 121/399 (30%), Positives = 205/399 (51%), Gaps = 11/399 (2%)
Query: 229 GYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPK 288
+ + G +A+ + M D ++ + C + L+ K + I
Sbjct: 228 AFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHL 287
Query: 289 SVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMV 348
+ + L++M++ CG ++A ++F +M + +W +I A +G G +A+ +F
Sbjct: 288 DLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFK 347
Query: 349 EQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFV 408
E+G PD F G+ AC VD+G +F SM ++GI P IE Y +V++ + GF+
Sbjct: 348 EEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFL 407
Query: 409 KEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIY 468
EAL+FV MP+EPN +W +++ G L+LG+ ++ + +PT + I
Sbjct: 408 DEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREGFIP 467
Query: 469 AKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMG 528
K E+++ + + G+K + M EF AGD + + ++++++ +
Sbjct: 468 VKASDVEKESLKKRSGILHGVK-----------SSMQEFRAGDTNLPENDELFQLLRNLK 516
Query: 529 REIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCE 588
+ GYV T L DID+E KE L HSE++A A A+LN+ P P ++KNLRVC
Sbjct: 517 MHMVEVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCV 576
Query: 589 DCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
DCH+A K +S + RE++ RD RFH KNG C+C D+W
Sbjct: 577 DCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 68/167 (40%), Gaps = 12/167 (7%)
Query: 151 KACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGK 210
K C L+ K VHG + DL + ++ MY A
Sbjct: 262 KICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANE-----------AAS 310
Query: 211 VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGA 270
VF++ + + TW +I +A+ G A+ +F + G PD + AC LG
Sbjct: 311 VFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGD 370
Query: 271 LELGKW-LESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM 316
++ G ES I S+E +L++M+A G +D+A+ +M
Sbjct: 371 VDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERM 417
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/429 (30%), Positives = 211/429 (49%), Gaps = 31/429 (7%)
Query: 103 SSFDAFLFNTLIRAFAHTP--------QSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACA 154
SS+ ++ ++ + + P S L Y +LR+G VP+ +T+ ++
Sbjct: 70 SSYTVSIYRSIGKLYCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIE 129
Query: 155 GLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXX---------XXXXX 205
+ GK HG +K G D L VQN+++HMY
Sbjct: 130 KTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNS 189
Query: 206 XLAG-----------KVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPD 254
+AG K+FDE P + ++W+ MI Y + ++ LFREM G +
Sbjct: 190 IIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGN 249
Query: 255 EITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFR 314
E T+V +L AC L+ G+ + + + + SV + ALIDM+ KC +V A +F
Sbjct: 250 ESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFD 309
Query: 315 QMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDK 374
+ V+W +I+ +HGR + LF+ M+ + PD+V+F+GVL C + LV +
Sbjct: 310 SLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQ 369
Query: 375 GRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRSII 431
G+SY++ M F I P H CM +L S AGF +EA + ++ +P V P W +++
Sbjct: 370 GQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLL 429
Query: 432 TACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKK 491
++ G LGESI+K L+ +P + Y LL NIY+ RWE +VREM+ R + +
Sbjct: 430 SSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGR 489
Query: 492 VPGSTMIEL 500
+PG +++L
Sbjct: 490 IPGCGLVDL 498
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/416 (29%), Positives = 218/416 (52%), Gaps = 21/416 (5%)
Query: 91 LFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVL 150
+FS P P S+++A L + + H ++ S+ +R M + P+K T +L
Sbjct: 372 IFSSIPQ--PSVSAWNAML--SGYSNYEHYEEAISN----FRQMQFQNLKPDKTTLSVIL 423
Query: 151 KACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGK 210
+CA L L GK +HG V++ + H+ + +I +Y ++
Sbjct: 424 SSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKME-----------ISEC 472
Query: 211 VFDES-PKTDSVTWSAMIGGYARRGHSSRAVGLFREM-QVMGVCPDEITMVSVLTACADL 268
+FD+ + D W++MI G+ ++A+ LFR M Q +CP+E + +VL++C+ L
Sbjct: 473 IFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRL 532
Query: 269 GALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVI 328
+L G+ + + AL DM+ KCG++D A F + V W +I
Sbjct: 533 CSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMI 592
Query: 329 VGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGI 388
G +GRG EAV L+ +M+ G +PD ++F+ VL+AC HS LV+ G +SM+ GI
Sbjct: 593 HGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGI 652
Query: 389 VPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISK 448
P+++HY C+VD L RAG +++A P + + ++W ++++C G++ L +++
Sbjct: 653 EPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAE 712
Query: 449 ELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEM 504
+L+R +P + YVLLSN Y+ LR+W+ ++ +M+ + K PG + N++
Sbjct: 713 KLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGNDL 768
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 171/361 (47%), Gaps = 28/361 (7%)
Query: 128 LQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHM 187
L +Y+ M+ G +P++FT VL AC+ + D G HG VK G D ++ V N ++ M
Sbjct: 123 LVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSM 182
Query: 188 YXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQ 247
Y +VF+ + + V+++A+IGG AR AV +FR M
Sbjct: 183 YAKCGFIVDYGV----------RVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMC 232
Query: 248 VMGVCPDEITMVSVLT------ACADLGAL---ELGKWLESYIEWKKIPKSVELCNALID 298
GV D + + ++L+ C L + ELGK + + L N+L++
Sbjct: 233 EKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLE 292
Query: 299 MFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVS 358
++AK D++ A +F +M +VSW +IVG R ++V M + G +P++V+
Sbjct: 293 IYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVT 352
Query: 359 FIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTM 418
I VL AC S V+ GR F+S+ P + + M+ S +EA+ R M
Sbjct: 353 CISVLGACFRSGDVETGRRIFSSIPQ-----PSVSAWNAMLSGYSNYEHYEEAISNFRQM 407
Query: 419 P---VEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVL-LSNIYAKLRRW 474
++P++ I+++C L+ G+ I ++R E + S+ V L +Y++ +
Sbjct: 408 QFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKM 467
Query: 475 E 475
E
Sbjct: 468 E 468
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 21/224 (9%)
Query: 162 GKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXL-------------- 207
GK +HG +V+ G D ++ N ++ +Y
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 208 ------AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSV 261
A +VFD P+ D V+W+ MI R+G +A+ +++ M G P T+ SV
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 262 LTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCG-DVDKAMNLFRQMDSCT 320
L+AC+ + G + K++ + NAL+ M+AKCG VD + +F +
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 321 IVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLS 364
VS+T+VI GLA + EAV +F M E+GV+ D V +LS
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 116/238 (48%), Gaps = 6/238 (2%)
Query: 210 KVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLG 269
++F P+ W+AM+ GY+ H A+ FR+MQ + PD+ T+ +L++CA L
Sbjct: 371 RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLR 430
Query: 270 ALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQ-MDSCTIVSWTSVI 328
LE GK + + +I K+ + + LI ++++C ++ + +F ++ I W S+I
Sbjct: 431 FLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMI 490
Query: 329 VGLAMHGRGSEAVSLFDEMVEQGVE-PDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG 387
G + ++A+ LF M + V P++ SF VLS+C + GR F+ + G
Sbjct: 491 SGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQ-FHGLVVKSG 549
Query: 388 IVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITAC--HARGELKLG 443
V + D+ + G + A F + + N +IW +I + RG+ +G
Sbjct: 550 YVSDSFVETALTDMYCKCGEIDSARQFFDAV-LRKNTVIWNEMIHGYGHNGRGDEAVG 606
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 119/303 (39%), Gaps = 63/303 (20%)
Query: 274 GKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM----------------- 316
GK + +I + LCN L+D++ +CGD D A +F +M
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 317 -----DSCTI---------VSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGV 362
++C + VSW ++I L G +A+ ++ MV G P + V
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 363 LSAC-----------CHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEA 411
LSAC CH V G N GN ++ + ++ GF+ +
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDK-NIFVGN-----------ALLSMYAKCGFIVDY 192
Query: 412 LDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKL 471
V +PN++ + ++I AR E K+ E++ L E + + V LSNI +
Sbjct: 193 GVRVFESLSQPNEVSYTAVIGGL-AR-ENKVLEAVQMFRLMCEKGVQVDSVCLSNILSIS 250
Query: 472 RRWEQKTKVREMMDMRGMKKVPGSTM-------IELNNEMCEFVAGDKSHDQYKQIYEMV 524
E + E+ K++ + + LNN + E A +K + + I+ +
Sbjct: 251 APREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEM 310
Query: 525 DEM 527
E+
Sbjct: 311 PEV 313
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 124/423 (29%), Positives = 233/423 (55%), Gaps = 27/423 (6%)
Query: 129 QLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMY 188
Q ++ +L G+ PN+FT+ V+ + D++LGK +H +K G ++ V + +++ Y
Sbjct: 79 QAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCY 138
Query: 189 XXXXXXX-------------XXXXXXXXXXXLAGKVFDES-------PKTDSVTWSAMIG 228
L F+E+ P+ VTW+A+IG
Sbjct: 139 VKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIG 198
Query: 229 GYARRGHSSRAVGLFREMQVMGVC-PDEITMVSVLTACADLGALELGKWLES-YIEWKKI 286
G+++ G + AV F +M GV P+E T +TA +++ + GK + + I++
Sbjct: 199 GFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGK 258
Query: 287 PKSVELCNALIDMFAKCGDVDKAMNLFRQMD--SCTIVSWTSVIVGLAMHGRGSEAVSLF 344
+V + N+LI ++KCG+++ ++ F +++ IVSW S+I G A +GRG EAV++F
Sbjct: 259 RFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMF 318
Query: 345 DEMV-EQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG--IVPKIEHYGCMVDL 401
++MV + + P++V+ +GVL AC H+ L+ +G YFN ++ + ++EHY CMVD+
Sbjct: 319 EKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDM 378
Query: 402 LSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNY 461
LSR+G KEA + +++MP++P W++++ C +L + + ++L +P S+Y
Sbjct: 379 LSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSY 438
Query: 462 VLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIY 521
V+LSN Y+ + W+ + +R M G+K+ G + IE+ +++ FV DK+++ ++Y
Sbjct: 439 VMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVY 498
Query: 522 EMV 524
M+
Sbjct: 499 RML 501
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 133/296 (44%), Gaps = 35/296 (11%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A KVFDE P+ D ++ +A+IG + + A F+ + +G+ P+E T +V+ +
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTT 105
Query: 268 LGALELGKWLESY--------------------------------IEWKKIPKSVELCNA 295
++LGK L Y + + P V + N
Sbjct: 106 SRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITN- 164
Query: 296 LIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVE-P 354
LI + K + ++A++LFR M ++V+W +VI G + GR EAV+ F +M+ +GV P
Sbjct: 165 LISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIP 224
Query: 355 DDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDF 414
++ +F ++A + G+S G + + ++ S+ G ++++L
Sbjct: 225 NESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLA 284
Query: 415 VRTMPVEPNQII-WRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYA 469
+ E I+ W S+I G + ++ ++++++ +N +L ++A
Sbjct: 285 FNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFA 340
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 129/267 (48%), Gaps = 29/267 (10%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVV-PNKFTYPFVLKACAGLSDLRLGKAVHGS 168
+N +I F+ T +++ + + + MLR GVV PN+ T+P + A + ++ GK++H
Sbjct: 193 WNAVIGGFSQTGRNEEA-VNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHAC 251
Query: 169 VVKF-GFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMI 227
+KF G ++ V N++I Y LA +E + + V+W++MI
Sbjct: 252 AIKFLGKRFNVFVWNSLISFY--------SKCGNMEDSLLAFNKLEEEQR-NIVSWNSMI 302
Query: 228 GGYARRGHSSRAVGLFREM-QVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKI 286
GYA G AV +F +M + + P+ +T++ VL AC G ++ E Y+ + K
Sbjct: 303 WGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQ-----EGYMYFNKA 357
Query: 287 ------PKSVELCN--ALIDMFAKCGDVDKAMNLFRQMD-SCTIVSWTSVIVGLAMHGRG 337
P +EL + ++DM ++ G +A L + M I W +++ G +H
Sbjct: 358 VNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNK 417
Query: 338 SEAVSLFDEMVEQGVEPDDVSFIGVLS 364
A +++E ++P DVS +LS
Sbjct: 418 RLAKLAASKILE--LDPRDVSSYVMLS 442
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 178/291 (61%), Gaps = 2/291 (0%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSS-RAVGLFREMQVMGVCPDEITMVSVLTACA 266
A ++F+ + D V ++AM+ G++R G ++ R+V ++ MQ G P+ T SV+ AC+
Sbjct: 225 AEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACS 284
Query: 267 DLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTS 326
L + E+G+ + + I + +++ ++L+DM+AKCG ++ A +F QM + SWTS
Sbjct: 285 VLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTS 344
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNF 386
+I G +G EA+ LF M E +EP+ V+F+G LSAC HS LVDKG F SM+ ++
Sbjct: 345 MIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDY 404
Query: 387 GIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESI 446
+ PK+EHY C+VDL+ RAG + +A +F R MP P+ IW +++++C+ G ++L
Sbjct: 405 SMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIA 464
Query: 447 SKELLR-NEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGST 496
+ EL + N Y+ LSN+YA +W+ +K+RE+M R + K G +
Sbjct: 465 ASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 114/235 (48%), Gaps = 19/235 (8%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D ++N ++ F+ + ++ + +Y +M R G PN T+ V+ AC+ L+ +G+ V
Sbjct: 236 DIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQV 295
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H ++K G + + ++++ MY A +VFD+ + + +W++
Sbjct: 296 HAQIMKSGVYTHIKMGSSLLDMYAKCGGIND-----------ARRVFDQMQEKNVFSWTS 344
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELG-KWLESYIEWK 284
MI GY + G+ A+ LF M+ + P+ +T + L+AC+ G ++ G + ES
Sbjct: 345 MIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDY 404
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMNLFRQM----DSCTIVSWTSVIVGLAMHG 335
+ +E ++D+ + GD++KA R M DS W +++ +HG
Sbjct: 405 SMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDI---WAALLSSCNLHG 456
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 136/369 (36%), Gaps = 91/369 (24%)
Query: 160 RLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTD 219
+ GK +H ++K GF DL++ ++ ++ A +VFDE PK
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLS-----------YARQVFDELPKPT 99
Query: 220 SVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGA-LELGKWLE 278
++ MI GY + G + L + M G D T+ VL A G+ + L + L
Sbjct: 100 LSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLC 159
Query: 279 SYIEWKKIPKSVE----LCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMH 334
+ + I VE L AL+D + K G ++ A +F M +V TS+I G
Sbjct: 160 RLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQ 219
Query: 335 G----------------------------RGSE----AVSLFDEMVEQGVEPDDVSFIGV 362
G R E +V ++ M G P+ +F V
Sbjct: 220 GFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASV 279
Query: 363 LSAC-----------CHSKLVDKG------------------------RSYFNSMEGNFG 387
+ AC H++++ G R F+ M+
Sbjct: 280 IGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEK-- 337
Query: 388 IVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRSIITACHARGELKLGE 444
+ + M+D + G +EAL+ M +EPN + + ++AC G + G
Sbjct: 338 ---NVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGY 394
Query: 445 SISKELLRN 453
I + + R+
Sbjct: 395 EIFESMQRD 403
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 137/445 (30%), Positives = 229/445 (51%), Gaps = 59/445 (13%)
Query: 101 RASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPN---------KFTYPFVLK 151
+ +S FLFN L+R ++ ++ LY + R + + FTY F+LK
Sbjct: 71 KQNSGKLFLFNPLLRCYS-LGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLK 129
Query: 152 ACAG--LSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAG 209
A + L LG +HG +K GF+ ++VQ ++ MY A
Sbjct: 130 ASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMID-----------AH 178
Query: 210 KVFDESPKTDSVTWSAMI-------------------------------GGYARRGHSSR 238
KVFDE P+ + VTW+ MI GYAR
Sbjct: 179 KVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKE 238
Query: 239 AVGLFREMQVM-GVCPDEITMVSVLTACADLGALELGKWLESYIEWKK-IPKSVELCNAL 296
A+ LF M + P+EIT++++L A +LG L++ + +Y+ + +P + + N+L
Sbjct: 239 AILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSL 298
Query: 297 IDMFAKCGDVDKAMNLFRQMDSC--TIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEP 354
ID +AKCG + A F ++ + +VSWT++I A+HG G EAVS+F +M G++P
Sbjct: 299 IDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKP 358
Query: 355 DDVSFIGVLSACCHSKLVDKG-RSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALD 413
+ V+ I VL+AC H L ++ +FN+M + I P ++HYGC+VD+L R G ++EA
Sbjct: 359 NRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEK 418
Query: 414 FVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRR 473
+P+E ++WR ++ AC + +L E ++++L+ E +H +YVL+SNI+ R
Sbjct: 419 IALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGR 478
Query: 474 WEQKTKVREMMDMRGMKKVPGSTMI 498
+ + R+ MD+RG+ K+PG + +
Sbjct: 479 FLDAQRFRKQMDVRGVAKLPGHSQV 503
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 130/416 (31%), Positives = 214/416 (51%), Gaps = 26/416 (6%)
Query: 86 YATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFT 145
YA FS R DA FN L + + + + +Y+ M +GV P+ T
Sbjct: 446 YAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKA-FDVYKNMKLHGVCPDSRT 504
Query: 146 YPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXX 205
+L+ CA SD G V+G ++K GFD + HV + +I+M+
Sbjct: 505 MVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAA--------- 555
Query: 206 XLAGKVFDESP-KTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTA 264
A +FD+ + +V+W+ M+ GY G + AV FR+M+V P+ +T V+++ A
Sbjct: 556 --AIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRA 613
Query: 265 CADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSW 324
A+L AL +G + S + + N+L+DM+AKCG ++ + F ++ + IVSW
Sbjct: 614 AAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSW 673
Query: 325 TSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEG 384
+++ A HG S AVSLF M E ++PD VSF+ VLSAC H+ LV++G+ F M
Sbjct: 674 NTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGE 733
Query: 385 NFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGE 444
I ++EHY CMVDLL +AG EA++ +R M V+ + +W +++ + L L
Sbjct: 734 RHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSN 793
Query: 445 SISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIEL 500
+ +L++ EP + S+Y Q ++ E+ ++ +KKVP + IE+
Sbjct: 794 AALCQLVKLEPLNPSHY-------------SQDRRLGEVNNVSRIKKVPACSWIEV 836
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 169/409 (41%), Gaps = 55/409 (13%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+ T++ A+AH + L+L+ M Y V NK L+A A + DL G A+H
Sbjct: 268 WGTMMAAYAHNGFFEEV-LELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYA 326
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
V+ G D+ V +++ MY +A ++F D V+WSAMI
Sbjct: 327 VQQGLIGDVSVATSLMSMYSKCGELE-----------IAEQLFINIEDRDVVSWSAMIAS 375
Query: 230 YARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKS 289
Y + G A+ LFR+M + + P+ +T+ SVL CA + A LGK + Y I
Sbjct: 376 YEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESE 435
Query: 290 VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVE 349
+E A+I M+AKCG A+ F ++ V++ ++ G G ++A ++ M
Sbjct: 436 LETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKL 495
Query: 350 QGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM------------EGNFGIVPKIEHYGC 397
GV PD + +G+L C +G + + + K +
Sbjct: 496 HGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAA 555
Query: 398 MVDLLSRAGFVK-------------------EALDFVRTMPVE---PNQIIWRSIITACH 435
+ L + GF K EA+ R M VE PN + + +I+ A
Sbjct: 556 AIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAA 615
Query: 436 ARGELKLGESISKELLR-----NEPTHESNYVLLSNIYAKLRRWEQKTK 479
L++G S+ L++ P S L ++YAK E K
Sbjct: 616 ELSALRVGMSVHSSLIQCGFCSQTPVGNS----LVDMYAKCGMIESSEK 660
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 180/414 (43%), Gaps = 49/414 (11%)
Query: 109 LFNTLIRAFAHTPQSKSS-GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHG 167
L+N++IR + + + G Y + + G+ P+K+++ F LKACAG D + G +H
Sbjct: 66 LWNSMIRGYTRAGLHREALGFFGYMSEEK-GIDPDKYSFTFALKACAGSMDFKKGLRIHD 124
Query: 168 SVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMI 227
+ + G + D+++ ++ MY A +VFD+ D VTW+ M+
Sbjct: 125 LIAEMGLESDVYIGTALVEMYCKARDLVS-----------ARQVFDKMHVKDVVTWNTMV 173
Query: 228 GGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIP 287
G A+ G SS A+ LF +M+ V D +++ +++ A + L ++ + L + K
Sbjct: 174 SGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI 233
Query: 288 KSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEM 347
+ + LIDM+ C D+ A ++F ++ SW +++ A +G E + LFD M
Sbjct: 234 FAFS--SGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLM 291
Query: 348 VEQGVEPDDV---------SFIG--VLSACCHSKLVDKG-------RSYFNSMEGNFGIV 389
V + V +++G V H V +G + SM G +
Sbjct: 292 RNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGEL 351
Query: 390 PKIEH------------YGCMVDLLSRAGFVKEALDFVRTM---PVEPNQIIWRSIITAC 434
E + M+ +AG EA+ R M ++PN + S++ C
Sbjct: 352 EIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGC 411
Query: 435 HARGELKLGESISKELLRNEPTHE-SNYVLLSNIYAKLRRWEQKTKVREMMDMR 487
+LG+SI ++ + E + ++YAK R+ K E + ++
Sbjct: 412 AGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIK 465
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 139/316 (43%), Gaps = 15/316 (4%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +NT++ A S S+ L L+ M V + + ++ A + L + + +
Sbjct: 165 DVVTWNTMVSGLAQNGCS-SAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCL 223
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
HG V+K GF + +I MY A VF+E + D +W
Sbjct: 224 HGLVIKKGFI--FAFSSGLIDMYCNCADLYA-----------AESVFEEVWRKDESSWGT 270
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
M+ YA G + LF M+ V +++ S L A A +G L G + Y +
Sbjct: 271 MMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQG 330
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
+ V + +L+ M++KCG+++ A LF ++ +VSW+++I G+ EA+SLF
Sbjct: 331 LIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFR 390
Query: 346 EMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRA 405
+M+ ++P+ V+ VL C G+S + I ++E ++ + ++
Sbjct: 391 DMMRIHIKPNAVTLTSVLQGCAGVAASRLGKS-IHCYAIKADIESELETATAVISMYAKC 449
Query: 406 GFVKEALDFVRTMPVE 421
G AL +P++
Sbjct: 450 GRFSPALKAFERLPIK 465
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 129/310 (41%), Gaps = 50/310 (16%)
Query: 148 FVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXL 207
+L+ C + R VHGS++ G L N +I+ Y L
Sbjct: 10 LMLREC---KNFRCLLQVHGSLIVSG----LKPHNQLINAYSLFQRQD-----------L 51
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM-QVMGVCPDEITMVSVLTACA 266
+ +FD V W++MI GY R G A+G F M + G+ PD+ + L ACA
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACA 111
Query: 267 DLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTS 326
+ G + I + V + AL++M+ K D+ A +F +M +V+W +
Sbjct: 112 GSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNT 171
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSA-----------CCHSKLVDKG 375
++ GLA +G S A+ LF +M V+ D VS ++ A C H ++ KG
Sbjct: 172 MVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKG 231
Query: 376 RSY-FNS----MEGNFGIVPKIE------------HYGCMVDLLSRAGFVKEAL---DFV 415
+ F+S M N + E +G M+ + GF +E L D +
Sbjct: 232 FIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLM 291
Query: 416 RTMPVEPNQI 425
R V N++
Sbjct: 292 RNYDVRMNKV 301
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 190/351 (54%), Gaps = 12/351 (3%)
Query: 149 VLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLA 208
+L C S + +G ++HG +K G V N +I MY
Sbjct: 353 ILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLF--------- 403
Query: 209 GKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMG-VCPDEITMVSVLTACAD 267
+F++ +T ++W+++I G + G +S A +F +M + G + PD IT+ S+L C+
Sbjct: 404 --LFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQ 461
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSV 327
L L LGK L Y +C ALIDM+AKCG+ +A ++F+ + + +W S+
Sbjct: 462 LCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSM 521
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG 387
I G ++ G A+S + EM E+G++PD+++F+GVLSAC H VD+G+ F +M FG
Sbjct: 522 ISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFG 581
Query: 388 IVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESIS 447
I P ++HY MV LL RA EAL + M ++P+ +W ++++AC EL++GE ++
Sbjct: 582 ISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVA 641
Query: 448 KELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMI 498
+++ + + YVL+SN+YA W+ +VR MM G G + I
Sbjct: 642 RKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 133/270 (49%), Gaps = 14/270 (5%)
Query: 98 TAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACA-GL 156
T P D F++L+++ H S SS + ++R +LR + PN FT L+A
Sbjct: 4 TKPITLYRDLSYFHSLLKSCIHGEIS-SSPITIFRDLLRSSLTPNHFTMSIFLQATTTSF 62
Query: 157 SDLRLG-KAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDES 215
+ +L + V + K G D ++V+ +++++Y A +FDE
Sbjct: 63 NSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTS-----------AQMLFDEM 111
Query: 216 PKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGK 275
P+ D+V W+A+I GY+R G+ A LF M G P T+V++L C G + G+
Sbjct: 112 PERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGR 171
Query: 276 WLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHG 335
+ + ++ NALI ++KC ++ A LFR+M + VSW ++I + G
Sbjct: 172 SVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSG 231
Query: 336 RGSEAVSLFDEMVEQGVEPDDVSFIGVLSA 365
EA+++F M E+ VE V+ I +LSA
Sbjct: 232 LQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 146/328 (44%), Gaps = 27/328 (8%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+NT+I A++ + + + + +++ M V + T +L A L H V
Sbjct: 220 WNTMIGAYSQSGLQEEA-ITVFKNMFEKNVEISPVTIINLLSAHVSHEPL------HCLV 272
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
VK G +D+ V +++ Y A +++ + + V ++++
Sbjct: 273 VKCGMVNDISVVTSLVCAYSRCGCLVS-----------AERLYASAKQDSIVGLTSIVSC 321
Query: 230 YARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKS 289
YA +G AV F + + + + D + +V +L C +++G L Y +
Sbjct: 322 YAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTK 381
Query: 290 VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDE-MV 348
+ N LI M++K DV+ + LF Q+ ++SW SVI G GR S A +F + M+
Sbjct: 382 TLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMML 441
Query: 349 EQGVEPDDVSFIGVLSACCHSKLVDKGRSYFN-SMEGNFGIVPKIEHYGC--MVDLLSRA 405
G+ PD ++ +L+ C ++ G+ ++ NF + E++ C ++D+ ++
Sbjct: 442 TGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNF----ENENFVCTALIDMYAKC 497
Query: 406 GFVKEALDFVRTMPVEPNQIIWRSIITA 433
G +A +++ P W S+I+
Sbjct: 498 GNEVQAESVFKSIKA-PCTATWNSMISG 524
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 93/205 (45%), Gaps = 4/205 (1%)
Query: 236 SSRAVGLFREMQVMGVCPDEITMVSVLTACA-DLGALELG-KWLESYIEWKKIPKSVELC 293
SS + +FR++ + P+ TM L A + +L + +++++ + + V +
Sbjct: 29 SSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVK 88
Query: 294 NALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVE 353
+L++++ K G V A LF +M V W ++I G + +G +A LF M++QG
Sbjct: 89 TSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS 148
Query: 354 PDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALD 413
P + + +L C V +GRS + + G+ + ++ S+ + A
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRS-VHGVAAKSGLELDSQVKNALISFYSKCAELGSAEV 207
Query: 414 FVRTMPVEPNQIIWRSIITACHARG 438
R M + + + W ++I A G
Sbjct: 208 LFREMK-DKSTVSWNTMIGAYSQSG 231
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 208/399 (52%), Gaps = 22/399 (5%)
Query: 232 RRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVE 291
R G +AV + + + G D + + C D AL+ K + +I +
Sbjct: 158 REGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDIS 217
Query: 292 LCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQG 351
N++I+M++ CG V+ A+ +F M + +W VI A +G+G +A+ F ++G
Sbjct: 218 AYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEG 277
Query: 352 VEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEA 411
+PD F + AC +++G +F SM +GI+P +EHY +V +L+ G++ EA
Sbjct: 278 NKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEA 337
Query: 412 LDFVRTMPVEPNQIIWRSIITACHARGELKLG---ESISKELLRNEPTHESNYVLLSNIY 468
L FV +M EPN +W +++ G+L LG + + ++L + ES L+
Sbjct: 338 LRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGLVPVKS 395
Query: 469 AKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMG 528
+ L V+E ++ M K P N + AGD S + +++Y + +
Sbjct: 396 SDL--------VKE--KLQRMAKGP-------NYGIRYMAAGDISRPENRELYMALKSLK 438
Query: 529 REIKRAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCE 588
+ GYVP + L D+D+E K++ L+ H+E+ A L+TP + IR++KNLRVC
Sbjct: 439 EHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCA 498
Query: 589 DCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
DCH+A K +SK+ RE++ RD RFHH K+G+CSC ++W
Sbjct: 499 DCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 77/190 (40%), Gaps = 15/190 (7%)
Query: 148 FVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXL 207
++ + C L+ K VH + D+ N++I MY
Sbjct: 186 WIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVED----------- 234
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A VF+ P+ + TW +I +A+ G A+ F + G PD + AC
Sbjct: 235 ALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGV 294
Query: 268 LGALELG--KWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
LG + G + Y E+ IP +E +L+ M A+ G +D+A+ M+ + W
Sbjct: 295 LGDMNEGLLHFESMYKEYGIIP-CMEHYVSLVKMLAEPGYLDEALRFVESMEP-NVDLWE 352
Query: 326 SVIVGLAMHG 335
+++ +HG
Sbjct: 353 TLMNLSRVHG 362
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/404 (31%), Positives = 198/404 (49%), Gaps = 45/404 (11%)
Query: 127 GLQLYRTMLRYGVVP-NKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMI 185
L L+ M +P + + LK+CA LG +VH VK F + V ++
Sbjct: 31 ALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALL 90
Query: 186 HMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFRE 245
MY A K+FDE P+ ++V W+AMI Y G AV L+
Sbjct: 91 DMYGKCLSVSH-----------ARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEA 139
Query: 246 MQVM-----------GVC----------------------PDEITMVSVLTACADLGALE 272
M VM G+ P+ IT++++++AC+ +GA
Sbjct: 140 MDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFR 199
Query: 273 LGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLA 332
L K + SY I +L + L++ + +CG + +F M+ +V+W+S+I A
Sbjct: 200 LIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYA 259
Query: 333 MHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKI 392
+HG A+ F EM V PDD++F+ VL AC H+ L D+ YF M+G++G+
Sbjct: 260 LHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASK 319
Query: 393 EHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLR 452
+HY C+VD+LSR G +EA ++ MP +P W +++ AC GE++L E ++ELL
Sbjct: 320 DHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLM 379
Query: 453 NEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGST 496
EP + +NYVLL IY + R E+ ++R M G+K PGS+
Sbjct: 380 VEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 101/226 (44%), Gaps = 23/226 (10%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
FN +I+ T ++ YR M+ + PN T ++ AC+ + RL K +H
Sbjct: 149 FNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYA 208
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
+ + +++ ++ Y VFD D V WS++I
Sbjct: 209 FRNLIEPHPQLKSGLVEAYGRCGSIVYVQL-----------VFDSMEDRDVVAWSSLISA 257
Query: 230 YARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIP-- 287
YA G + A+ F+EM++ V PD+I ++VL AC+ G + E+ + +K++
Sbjct: 258 YALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLAD-----EALVYFKRMQGD 312
Query: 288 ----KSVELCNALIDMFAKCGDVDKAMNLFRQM-DSCTIVSWTSVI 328
S + + L+D+ ++ G ++A + + M + T +W +++
Sbjct: 313 YGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALL 358
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 212/410 (51%), Gaps = 14/410 (3%)
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIH 186
L ++ ML+ G + V+ +CA L LG +VHG V++ G+ D N++I
Sbjct: 330 ALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLIT 389
Query: 187 MYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM 246
MY +F+ + D V+W+A+I GYA+ +A+ LF EM
Sbjct: 390 MYAKCGHLDKSLV-----------IFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEM 438
Query: 247 QVMGVCP-DEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGD 305
+ V D T+VS+L AC+ GAL +GK + + I + AL+DM++KCG
Sbjct: 439 KFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGY 498
Query: 306 VDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSA 365
++ A F + +VSW +I G HG+G A+ ++ E + G+EP+ V F+ VLS+
Sbjct: 499 LEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSS 558
Query: 366 CCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQI 425
C H+ +V +G F+SM +FG+ P EH C+VDLL RA +++A F + P+
Sbjct: 559 CSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSID 618
Query: 426 IWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMD 485
+ I+ AC A G+ ++ + I ++++ +P +YV L + +A ++RW+ ++ M
Sbjct: 619 VLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMR 678
Query: 486 MRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAG 535
G+KK+PG + IE+N + F SH ++ + RE+ + G
Sbjct: 679 SLGLKKLPGWSKIEMNGKTTTFFMNHTSHSD--DTVSLLKLLSREMMQFG 726
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 116/460 (25%), Positives = 209/460 (45%), Gaps = 66/460 (14%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +NT+I +A + + S L+L M G+ P++ T+ L + DL +G+ +
Sbjct: 209 DMVSWNTMISGYA-SVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRML 267
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H +VK GFD D+H++ +I MY +V + P D V W+
Sbjct: 268 HCQIVKTGFDVDMHLKTALITMYLKCGKEEASY-----------RVLETIPNKDVVCWTV 316
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
MI G R G + +A+ +F EM G + SV+ +CA LG+ +LG + Y+
Sbjct: 317 MISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHG 376
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
N+LI M+AKCG +DK++ +F +M+ +VSW ++I G A + +A+ LF+
Sbjct: 377 YTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFE 436
Query: 346 EMVEQGVEP-DDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSR 404
EM + V+ D + + +L AC + + G+ + +F I P +VD+ S+
Sbjct: 437 EMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-IRPCSLVDTALVDMYSK 495
Query: 405 AGFVKEAL-----------------------------------DFVRTMPVEPNQIIWRS 429
G+++ A +F+ + +EPN +I+ +
Sbjct: 496 CGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHS-GMEPNHVIFLA 554
Query: 430 IITACHARGELKLGESISKELLRN---EPTHESNYVLLSNIYAKLRRWEQKTK------V 480
++++C G ++ G I ++R+ EP HE + + ++ + +R E K
Sbjct: 555 VLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHE-HLACVVDLLCRAKRIEDAFKFYKENFT 613
Query: 481 REMMDMRGMK----KVPGSTMIE--LNNEMCEFVAGDKSH 514
R +D+ G+ + G T +E + +M E GD H
Sbjct: 614 RPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGH 653
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 187/414 (45%), Gaps = 49/414 (11%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
FN+ I + K L + +ML ++P+ FT+P +LKACA L L G ++H V
Sbjct: 14 FNSHINHLSSHGDHKQV-LSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQV 72
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
+ GF D ++ ++++++Y A KVF+E + D V W+AMIG
Sbjct: 73 LVNGFSSDFYISSSLVNLYAKFGLLAH-----------ARKVFEEMRERDVVHWTAMIGC 121
Query: 230 YARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKS 289
Y+R G A L EM+ G+ P +T++ +L+ ++ L+ L +
Sbjct: 122 YSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCD 178
Query: 290 VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVE 349
+ + N++++++ KC V A +LF QM+ +VSW ++I G A G SE + L M
Sbjct: 179 IAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRG 238
Query: 350 QGVEPDDVSFIGVLSAC-----------CHSKLVDKG-------RSYFNSM-------EG 384
G+ PD +F LS H ++V G ++ +M E
Sbjct: 239 DGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEA 298
Query: 385 NFGIVPKIEH-----YGCMVDLLSRAGFVKEALDFVRTMPVEPNQI---IWRSIITACHA 436
++ ++ I + + M+ L R G ++AL M + + S++ +C
Sbjct: 299 SYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQ 358
Query: 437 RGELKLGESISKELLRNEPTHESNYV-LLSNIYAKLRRWEQKTKVREMMDMRGM 489
G LG S+ +LR+ T ++ + L +YAK ++ + E M+ R +
Sbjct: 359 LGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDL 412
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 138/304 (45%), Gaps = 16/304 (5%)
Query: 130 LYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYX 189
L M G+ P T +L+ +G+ ++ + +H V +GFD D+ V N+M+++Y
Sbjct: 134 LVNEMRFQGIKPGPVT---LLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYC 190
Query: 190 XXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVM 249
A +FD+ + D V+W+ MI GYA G+ S + L M+
Sbjct: 191 KCDHVGD-----------AKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGD 239
Query: 250 GVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKA 309
G+ PD+ T + L+ + LE+G+ L I + L ALI M+ KCG + +
Sbjct: 240 GLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEAS 299
Query: 310 MNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHS 369
+ + + +V WT +I GL GR +A+ +F EM++ G + + V+++C
Sbjct: 300 YRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQL 359
Query: 370 KLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRS 429
D G S + G ++ + ++ G + ++L M E + + W +
Sbjct: 360 GSFDLGASVHGYVL-RHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNA 417
Query: 430 IITA 433
II+
Sbjct: 418 IISG 421
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 213 bits (542), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/383 (31%), Positives = 195/383 (50%), Gaps = 29/383 (7%)
Query: 245 EMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCG 304
E+ G PD V + +CA+L +LE K + + K +L N +I MF +C
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 305 DVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLS 364
+ A +F M + SW ++ + +G G +A+ LF+EM + G++P++ +F+ V
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 365 ACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQ 424
AC +++ +F+SM+ GI PK EHY ++ +L + G + EA ++R +P EP
Sbjct: 346 ACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTA 405
Query: 425 IIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMM 484
W ++ G++ L + + + ++ +P+ V +
Sbjct: 406 DFWEAMRNYARLHGDIDLEDYMEELMVDVDPS---------------------KAVINKI 444
Query: 485 DMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVL 544
K + M+ + + EF D+ K EM + G YVP T VL
Sbjct: 445 PTPPPKSFKETNMVTSKSRILEFRNLTFYKDEAK---EMAAKKG-----VVYVPDTRFVL 496
Query: 545 LDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNRE 604
DID+E KE AL HSE+LAIA+ ++ TPP + I+KNLRVC DCH+ K +SK+ R
Sbjct: 497 HDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRV 556
Query: 605 IVVRDRNRFHHFKNGLCSCGDFW 627
++VRD RFHHFK+G CSCGD+W
Sbjct: 557 LIVRDNKRFHHFKDGKCSCGDYW 579
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 93/224 (41%), Gaps = 17/224 (7%)
Query: 134 MLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXX 193
+L G +P++ + + ++CA L L K VH ++ F D + N +I M+
Sbjct: 227 LLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSS 286
Query: 194 XXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCP 253
A +VFD D +W M+ Y+ G A+ LF EM G+ P
Sbjct: 287 ITD-----------AKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKP 335
Query: 254 DEITMVSVLTACADLGALELG-KWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNL 312
+E T ++V ACA +G +E +S I E ++ + KCG + +A
Sbjct: 336 NEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQY 395
Query: 313 FRQMD-SCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPD 355
R + T W ++ +HG + L D M E V+ D
Sbjct: 396 IRDLPFEPTADFWEAMRNYARLHG----DIDLEDYMEELMVDVD 435
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 212 bits (539), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 126/424 (29%), Positives = 224/424 (52%), Gaps = 21/424 (4%)
Query: 123 SKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQN 182
+K + ++ M GV PN+ T+ ++ A ++ G +HG +K GF + V N
Sbjct: 352 NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGN 411
Query: 183 TMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGL 242
+ I +Y A K F++ + ++W+AMI G+A+ G S A+ +
Sbjct: 412 SFITLYAKFEALED-----------AKKAFEDITFREIISWNAMISGFAQNGFSHEALKM 460
Query: 243 FREMQVMGVCPDEITMVSVLTACA---DLGALELGKWLESYIEWKKIPKSVELCNALIDM 299
F + P+E T SVL A A D+ +++ G+ +++ + + +AL+DM
Sbjct: 461 FLSAAAETM-PNEYTFGSVLNAIAFAEDI-SVKQGQRCHAHLLKLGLNSCPVVSSALLDM 518
Query: 300 FAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSF 359
+AK G++D++ +F +M WTS+I + HG ++LF +M+++ V PD V+F
Sbjct: 519 YAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTF 578
Query: 360 IGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP 419
+ VL+AC +VDKG FN M + + P EHY CMVD+L RAG +KEA + + +P
Sbjct: 579 LSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVP 638
Query: 420 VEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTK 479
P + + +S++ +C G +K+G +++ + +P +YV + NIYA+ W++ +
Sbjct: 639 GGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAE 698
Query: 480 VREMMDMRGMKKVPGSTMIELNN-----EMCEFVAGDKSHDQYKQIYEMVDEMGREIKRA 534
+R+ M + + K G + I++ + M F +GDKSH + +IY MV+ +G E+
Sbjct: 699 IRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLE 758
Query: 535 GYVP 538
G V
Sbjct: 759 GKVA 762
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 179/429 (41%), Gaps = 78/429 (18%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +NT++ F L M GVV + FTY L C G LG +
Sbjct: 141 DVVSWNTILSGF----DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQL 196
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
+VVK G + DL V N+ I MY A +VFDE D ++W++
Sbjct: 197 QSTVVKTGLESDLVVGNSFITMYSRSGSFRG-----------ARRVFDEMSFKDMISWNS 245
Query: 226 MIGGYARRG-HSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWK 284
++ G ++ G AV +FR+M GV D ++ SV+T C L+L + + +
Sbjct: 246 LLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKR 305
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLF 344
+E+ N L+ ++KCG ++ ++F QM +VSWT++I +AVS+F
Sbjct: 306 GYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIF 360
Query: 345 DEMVEQGVEPDDVSFIGVLSA----------------CCHSKLVDK---GRSY------F 379
M GV P++V+F+G+++A C + V + G S+ F
Sbjct: 361 LNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKF 420
Query: 380 NSMEGNFGIVPKIE-----HYGCMVDLLSRAGFVKEALDFVRTMPVE--PNQIIWRSIIT 432
++E I + M+ ++ GF EAL + E PN+ + S++
Sbjct: 421 EALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLN 480
Query: 433 A--------------CHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKT 478
A CHA LKLG L + P S L ++YAK ++
Sbjct: 481 AIAFAEDISVKQGQRCHAH-LLKLG-------LNSCPVVSS---ALLDMYAKRGNIDESE 529
Query: 479 KVREMMDMR 487
KV M +
Sbjct: 530 KVFNEMSQK 538
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 141/316 (44%), Gaps = 22/316 (6%)
Query: 122 QSKSSGLQLYRTMLRYGVVP---NKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDL 178
S + L +++ L+ G ++ T LKAC G DL+ G +HG GF +
Sbjct: 54 NSPARALSIFKENLQLGYFGRHMDEVTLCLALKACRG--DLKRGCQIHGFSTTSGFTSFV 111
Query: 179 HVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSR 238
V N ++ MY A +F+ D V+W+ ++ G+ +
Sbjct: 112 CVSNAVMGMYRKAGRFDN-----------ALCIFENLVDPDVVSWNTILSGF---DDNQI 157
Query: 239 AVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALID 298
A+ M+ GV D T + L+ C LG L+S + + + + N+ I
Sbjct: 158 ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFIT 217
Query: 299 MFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGR-GSEAVSLFDEMVEQGVEPDDV 357
M+++ G A +F +M ++SW S++ GL+ G G EAV +F +M+ +GVE D V
Sbjct: 218 MYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHV 277
Query: 358 SFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRT 417
SF V++ CCH + R + + G +E ++ S+ G V EA+ V
Sbjct: 278 SFTSVITTCCHETDLKLARQ-IHGLCIKRGYESLLEVGNILMSRYSKCG-VLEAVKSVFH 335
Query: 418 MPVEPNQIIWRSIITA 433
E N + W ++I++
Sbjct: 336 QMSERNVVSWTTMISS 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 138/337 (40%), Gaps = 48/337 (14%)
Query: 207 LAGKVFDESPKTDSVT-WSAMIGGYARRGHSSRAVGLFRE---MQVMGVCPDEITMVSVL 262
+A K+FD S + ++ T + I RR +RA+ +F+E + G DE+T+ L
Sbjct: 26 IAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLAL 85
Query: 263 TACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIV 322
AC G L+ G + + V + NA++ M+ K G D A+ +F + +V
Sbjct: 86 KACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVV 143
Query: 323 SWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACC-----------HSKL 371
SW +++ G A++ M GV D ++ LS C S +
Sbjct: 144 SWNTILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTV 200
Query: 372 VDK--------GRSYFN--SMEGNFGIVPKI---------EHYGCMVDLLSRAG-FVKEA 411
V G S+ S G+F ++ + ++ LS+ G F EA
Sbjct: 201 VKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEA 260
Query: 412 LDFVRTM---PVEPNQIIWRSIITACHARGELKLGESISKELLRN--EPTHESNYVLLSN 466
+ R M VE + + + S+IT C +LKL I ++ E E +L+S
Sbjct: 261 VVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSR 320
Query: 467 IYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNE 503
Y+K E V M R + V +TMI N +
Sbjct: 321 -YSKCGVLEAVKSVFHQMSERNV--VSWTTMISSNKD 354
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 212 bits (539), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 197/382 (51%), Gaps = 29/382 (7%)
Query: 63 GLINNPLVLTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQ 122
L N+ L++ + + SS+F YA S +F+ + S F +N +IR+ + +
Sbjct: 47 NLTNDQLLVRQLISVSSSFGETQYA-SLVFN-------QLQSPSTFTWNLMIRSLSVNHK 98
Query: 123 SKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQN 182
+ + L M+ + +KFT+PFV+KAC S +RLG VHG +K GF +D+ QN
Sbjct: 99 PREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQN 158
Query: 183 TMIHMY--------------------XXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVT 222
T++ +Y A VF++ P + V+
Sbjct: 159 TLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVS 218
Query: 223 WSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIE 282
W+AMI Y + A LFR MQV V P+E T+V++L A LG+L +G+W+ Y
Sbjct: 219 WTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAH 278
Query: 283 WKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVS 342
L ALIDM++KCG + A +F M ++ +W S+I L +HG G EA+S
Sbjct: 279 KNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALS 338
Query: 343 LFDEMVEQG-VEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDL 401
LF+EM E+ VEPD ++F+GVLSAC ++ V G YF M +GI P EH CM+ L
Sbjct: 339 LFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQL 398
Query: 402 LSRAGFVKEALDFVRTMPVEPN 423
L +A V++A + V +M +P+
Sbjct: 399 LEQALEVEKASNLVESMDSDPD 420
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 208/401 (51%), Gaps = 22/401 (5%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +NT+I ++ KS+ + +Y+ M GV P++FT+ +L A DL + + V
Sbjct: 353 DLVTWNTMISSYNQAKLGKSA-MSVYKRMHIIGVKPDEFTFGSLL---ATSLDLDVLEMV 408
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
++KFG + + N +I Y A +F+ S + + ++W+A
Sbjct: 409 QACIIKFGLSSKIEISNALISAYSKNGQIEK-----------ADLLFERSLRKNLISWNA 457
Query: 226 MIGGYARRGHSSRAVGLFR---EMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIE 282
+I G+ G + F E +V + PD T+ ++L+ C +L LG +Y+
Sbjct: 458 IISGFYHNGFPFEGLERFSCLLESEVR-ILPDAYTLSTLLSICVSTSSLMLGSQTHAYVL 516
Query: 283 WKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVS 342
K + NALI+M+++CG + ++ +F QM +VSW S+I + HG G AV+
Sbjct: 517 RHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVN 576
Query: 343 LFDEMVEQG-VEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDL 401
+ M ++G V PD +F VLSAC H+ LV++G FNSM G++ ++H+ C+VDL
Sbjct: 577 TYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDL 636
Query: 402 LSRAGFVKEALDFVRT--MPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHES 459
L RAG + EA V+ + +W ++ +AC A G+LKLG+ ++K L+ E S
Sbjct: 637 LGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPS 696
Query: 460 NYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIEL 500
YV LSNIYA W++ + R ++M G K G + + L
Sbjct: 697 VYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 156/336 (46%), Gaps = 23/336 (6%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D FN +I A + +S L ++R ML + P T+ V+ +C+ + +G V
Sbjct: 256 DQVTFNVVIDGLAGFKRDES--LLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQV 310
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
HG +K G++ V N + MY A KVF+ + D VTW+
Sbjct: 311 HGLAIKTGYEKYTLVSNATMTMYSSFEDFGA-----------AHKVFESLEEKDLVTWNT 359
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
MI Y + A+ +++ M ++GV PDE T S+L DL LE+ +++ I
Sbjct: 360 MISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEM---VQACIIKFG 416
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
+ +E+ NALI ++K G ++KA LF + ++SW ++I G +G E + F
Sbjct: 417 LSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFS 476
Query: 346 EMVEQGVE--PDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLS 403
++E V PD + +LS C + + G S ++ G + ++++ S
Sbjct: 477 CLLESEVRILPDAYTLSTLLSICVSTSSLMLG-SQTHAYVLRHGQFKETLIGNALINMYS 535
Query: 404 RAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGE 439
+ G ++ +L+ M E + + W S+I+A GE
Sbjct: 536 QCGTIQNSLEVFNQMS-EKDVVSWNSLISAYSRHGE 570
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 25/249 (10%)
Query: 141 PNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXX-------- 192
P++++ + L D G VH ++ G HV NT++ +Y
Sbjct: 55 PDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKK 114
Query: 193 ------------XXXXXXXXXXXXXXLAGKVFDESPKTDSVT-WSAMIGGYARRGHSSRA 239
A +VFD+ P+ D V W+AMI G G+ +
Sbjct: 115 FDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETS 174
Query: 240 VGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDM 299
V LFREM +GV D+ ++L+ C D G+L+ GK + S + + + NALI M
Sbjct: 175 VELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITM 233
Query: 300 FAKCGDVDKAMNLFRQMDSCT--IVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDV 357
+ C V A +F + D V++ VI GLA R E++ +F +M+E + P D+
Sbjct: 234 YFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKR-DESLLVFRKMLEASLRPTDL 292
Query: 358 SFIGVLSAC 366
+F+ V+ +C
Sbjct: 293 TFVSVMGSC 301
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 156/339 (46%), Gaps = 32/339 (9%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D ++N +I + ++S ++L+R M + GV +KF + +L C L GK V
Sbjct: 154 DVAIWNAMITGCKESGYHETS-VELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQV 211
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKT--DSVTW 223
H V+K GF V N +I MY A VF+E+ D VT+
Sbjct: 212 HSLVIKAGFFIASSVVNALITMYFNCQVVVD-----------ACLVFEETDVAVRDQVTF 260
Query: 224 SAMIGGYA--RRGHSSRAVGLFREMQVMGVCPDEITMVSVL--TACADLGALELGKWLES 279
+ +I G A +R S + +FR+M + P ++T VSV+ +CA +G G +++
Sbjct: 261 NVVIDGLAGFKRDES---LLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKT 317
Query: 280 YIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSE 339
E K + NA + M++ D A +F ++ +V+W ++I G
Sbjct: 318 GYE-----KYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKS 372
Query: 340 AVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMV 399
A+S++ M GV+PD+ +F +L+ +++ ++ FG+ KIE ++
Sbjct: 373 AMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACII----KFGLSSKIEISNALI 428
Query: 400 DLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARG 438
S+ G +++A D + + N I W +II+ + G
Sbjct: 429 SAYSKNGQIEKA-DLLFERSLRKNLISWNAIISGFYHNG 466
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 126/410 (30%), Positives = 214/410 (52%), Gaps = 18/410 (4%)
Query: 127 GLQLYRTMLRYGVV-PNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMI 185
+ +YR +LR P+++T+ + A A GK +HG V K G++ + V T++
Sbjct: 385 AMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLL 444
Query: 186 HMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFRE 245
MY A KVFD + D V W+ MI G++R G+S AV F E
Sbjct: 445 SMYFKNREAES-----------AQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIE 493
Query: 246 MQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGD 305
M D ++ SV+ AC+D+ L G+ + +C AL+DM+ K G
Sbjct: 494 MYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGK 553
Query: 306 VDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSA 365
+ A +F + + W S++ + HG +A+S F++++E G PD V+++ +L+A
Sbjct: 554 YETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAA 613
Query: 366 CCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQI 425
C H +G+ +N M+ GI +HY CMV+L+S+AG V EAL+ + P NQ
Sbjct: 614 CSHRGSTLQGKFLWNQMKEQ-GIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQA 672
Query: 426 -IWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMM 484
+WR++++AC L++G ++++L+ +P + ++LLSN+YA RWE ++R +
Sbjct: 673 ELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKI 732
Query: 485 DMRGMKKVPGSTMIELNNEMCE-FVAGDKSHDQYKQIYEMVDEMGREIKR 533
K PG + IE+NN + F +GD+S+ + + + DE+ R +KR
Sbjct: 733 RGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPEV--VSQAQDELNR-LKR 779
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 127/257 (49%), Gaps = 12/257 (4%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+N L A++ P S L M V PN T+ +++ CA L D+ +G +++ +
Sbjct: 166 YNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQI 225
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
+K G+ D++ VQ +++ MY A ++FD D+V W+ MI G
Sbjct: 226 IKLGYSDNVVVQTSVLGMYSSCGDLES-----------ARRIFDCVNNRDAVAWNTMIVG 274
Query: 230 YARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKS 289
+ + FR M + GV P + T VL C+ LG+ LGK + + I
Sbjct: 275 SLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLAD 334
Query: 290 VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVE 349
+ L NAL+DM+ CGD+ +A +F ++ + +VSW S+I G + +G G +A+ ++ ++
Sbjct: 335 LPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLR 394
Query: 350 QGV-EPDDVSFIGVLSA 365
PD+ +F +SA
Sbjct: 395 MSTPRPDEYTFSAAISA 411
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 150/358 (41%), Gaps = 26/358 (7%)
Query: 125 SSGLQLYRTMLRYGVVPNKFTYPF---------VLKACAGLSDLRLGKAVHGSVVKFGF- 174
S G L+ +++ G F P + + C ++ L+ + +H V+ G
Sbjct: 67 SMGSSLHSQIIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAG 126
Query: 175 --DDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYAR 232
+ + N +I MY A KVFD+ P + V+++A+ Y+R
Sbjct: 127 AATESPYANNNLISMYVRCGSLEQ-----------ARKVFDKMPHRNVVSYNALYSAYSR 175
Query: 233 R-GHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVE 291
+S A L M V P+ T S++ CA L + +G L S I +V
Sbjct: 176 NPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVV 235
Query: 292 LCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQG 351
+ +++ M++ CGD++ A +F +++ V+W ++IVG + + + + F M+ G
Sbjct: 236 VQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSG 295
Query: 352 VEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEA 411
V+P ++ VL+ C G+ + + + + ++D+ G ++EA
Sbjct: 296 VDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLA-DLPLDNALLDMYCSCGDMREA 354
Query: 412 LDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYA 469
+V PN + W SII+ C G + + + LLR Y + I A
Sbjct: 355 F-YVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISA 411
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D L+ +I + S+ + +Q + M R + F+ V+ AC+ ++ LR G+
Sbjct: 467 DVVLWTEMIVGHSRLGNSELA-VQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVF 525
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H ++ GFD + V ++ MY A +F + D W++
Sbjct: 526 HCLAIRTGFDCVMSVCGALVDMYGKNGKYET-----------AETIFSLASNPDLKCWNS 574
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
M+G Y++ G +A+ F ++ G PD +T +S+L AC+ G+ GK+L + ++ +
Sbjct: 575 MLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQG 634
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQ 315
I + + ++++ +K G VD+A+ L Q
Sbjct: 635 IKAGFKHYSCMVNLVSKAGLVDEALELIEQ 664
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/369 (32%), Positives = 198/369 (53%), Gaps = 12/369 (3%)
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIH 186
G+ L+ M G PN +T + S L + +VH +K D +V +++
Sbjct: 191 GINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVN 250
Query: 187 MYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM 246
MY A VF+ + D V S++I GY+R G+ A+ LF E+
Sbjct: 251 MYSRCMCIAS-----------ACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAEL 299
Query: 247 QVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDV 306
++ G PD + + VL +CA+L GK + SY+ + +++C+ALIDM++KCG +
Sbjct: 300 RMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLL 359
Query: 307 DKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSAC 366
AM+LF + IVS+ S+I+GL +HG S A F E++E G+ PD+++F +L C
Sbjct: 360 KCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTC 419
Query: 367 CHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQII 426
CHS L++KG+ F M+ FGI P+ EHY MV L+ AG ++EA +FV ++ + I
Sbjct: 420 CHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGI 479
Query: 427 WRSIITACHARGELKLGESISKELLRNEPTHESNY-VLLSNIYAKLRRWEQKTKVREMMD 485
++++ C L E +++ + +N S Y V+LSN+YA+ RW++ ++R+ +
Sbjct: 480 LGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGIS 539
Query: 486 MRGMKKVPG 494
K+PG
Sbjct: 540 ESYGGKLPG 548
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 161/367 (43%), Gaps = 22/367 (5%)
Query: 71 LTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAF------LFNTLIRAFAHTPQSK 124
+TK + A A + +DD +A + FD F L+N++IRA+A Q
Sbjct: 31 VTKSKLARDPYFATQLARFYALNDDLISARKL--FDVFPERSVFLWNSIIRAYAKAHQF- 87
Query: 125 SSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTM 184
++ L L+ +LR P+ FTY + + + D + + +HG + G D + +
Sbjct: 88 TTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAI 147
Query: 185 IHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFR 244
+ Y A K+F P D W+ MI GY G + + LF
Sbjct: 148 VKAYSKAGLIVE-----------ASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFN 196
Query: 245 EMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCG 304
MQ G P+ TMV++ + D L + + ++ + + AL++M+++C
Sbjct: 197 LMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCM 256
Query: 305 DVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLS 364
+ A ++F + +V+ +S+I G + G EA+ LF E+ G +PD V VL
Sbjct: 257 CIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLG 316
Query: 365 ACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQ 424
+C G+ +S G+ I+ ++D+ S+ G +K A+ +P E N
Sbjct: 317 SCAELSDSVSGKE-VHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP-EKNI 374
Query: 425 IIWRSII 431
+ + S+I
Sbjct: 375 VSFNSLI 381
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 205 bits (521), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 176/311 (56%)
Query: 210 KVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLG 269
++F P+ D++TW+AMI + G+ A+ F +M VCP+ T SVL+A A L
Sbjct: 393 ELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLA 452
Query: 270 ALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIV 329
L G + + I + + N+L+ M+ KCG+ + A +F + IVS+ ++I
Sbjct: 453 DLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMIS 512
Query: 330 GLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIV 389
G + +G G +A+ LF + G EP+ V+F+ +LSAC H VD G YF SM+ ++ I
Sbjct: 513 GYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIE 572
Query: 390 PKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKE 449
P +HY CMVDLL R+G + +A + + TMP +P+ +W S+++A + L E +K+
Sbjct: 573 PGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKK 632
Query: 450 LLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVA 509
L+ EP + YV+LS +Y+ + + ++ + + +KK PGS+ I L E+ F+A
Sbjct: 633 LIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLA 692
Query: 510 GDKSHDQYKQI 520
GD+S ++I
Sbjct: 693 GDESQLNLEEI 703
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 125/262 (47%), Gaps = 18/262 (6%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D + +I AF + + L + ML+ V PN +T+ VL A A L+DL G +
Sbjct: 402 DNITWTAMISAFVSNGYYEEA-LCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQI 460
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
HG VVK +DL VQN+++ MY A K+F + + V+++
Sbjct: 461 HGRVVKMNIVNDLSVQNSLVSMYCKCGNTND-----------AYKIFSCISEPNIVSYNT 509
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELG-KWLESYIEWK 284
MI GY+ G +A+ LF ++ G P+ +T +++L+AC +G ++LG K+ +S
Sbjct: 510 MISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSY 569
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVS--WTSVIVGLAMHGRGSEAVS 342
I + ++D+ + G +D A NL M C S W S++ H R A
Sbjct: 570 NIEPGPDHYACMVDLLGRSGLLDDASNLISTM-PCKPHSGVWGSLLSASKTHLRVDLAEL 628
Query: 343 LFDEMVEQGVEPDDVSFIGVLS 364
+++E +EPD + VLS
Sbjct: 629 AAKKLIE--LEPDSATPYVVLS 648
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 17/251 (6%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMG-VCPDEITMVSVLTACA 266
A +FD + + +TW+AMI GY + G GLF M+ G V + T+ + AC
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 267 DLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTS 326
D G + + + + L N+L+ M++K G + +A +F M + VSW S
Sbjct: 287 DFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNS 346
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNF 386
+I GL + SEA LF++M + D VS+ ++ G+ + F
Sbjct: 347 LITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIKGF-------SGKGEISKCVELF 395
Query: 387 GIVPKIEH--YGCMVDLLSRAGFVKEALDFVRTM---PVEPNQIIWRSIITACHARGELK 441
G++P+ ++ + M+ G+ +EAL + M V PN + S+++A + +L
Sbjct: 396 GMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLI 455
Query: 442 LGESISKELLR 452
G I +++
Sbjct: 456 EGLQIHGRVVK 466
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 107/234 (45%), Gaps = 9/234 (3%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A ++F + P+ ++V+++ MI G+ R G A L+ E V D + +L+
Sbjct: 132 AYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVK--FRDSVASNVLLS---- 185
Query: 268 LGALELGKWLESYIEWKKIP-KSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTS 326
G L GKW E+ ++ + K V C++++ + K G + A +LF +M +++WT+
Sbjct: 186 -GYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTA 244
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNF 386
+I G G + LF M ++G + + + V+ C + + S + +
Sbjct: 245 MIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRM 304
Query: 387 GIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGEL 440
+ + ++ + S+ G++ EA M + + W S+IT R ++
Sbjct: 305 PLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK-NKDSVSWNSLITGLVQRKQI 357
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 148/360 (41%), Gaps = 69/360 (19%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A +F + V+W AMI YA G S+A +F EM V + +++ D
Sbjct: 69 AEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCD 128
Query: 268 LG-ALEL----------------------GKWLESYIEWKKIP---KSVELCNALIDMFA 301
LG A EL G++ E+ + + P + N L+ +
Sbjct: 129 LGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYL 188
Query: 302 KCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIG 361
+ G ++A+ +F+ M +VS +S++ G GR +A SLFD M E+ V
Sbjct: 189 RAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNV--------- 239
Query: 362 VLSACCHSKLVDKGRSYFNS--MEGNFGIVPKIEHYG-CMVDLLSRAGFVKEALDFVR-- 416
+ ++D YF + E FG+ ++ G V+ + A K DFVR
Sbjct: 240 ----ITWTAMID---GYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYR 292
Query: 417 ----------TMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSN 466
MP+E + + S+++ G + +++ +++N+ + N ++
Sbjct: 293 EGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFG-VMKNKDSVSWNSLITGL 351
Query: 467 IYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDE 526
+ Q+ ++ E ++ +K+PG M+ +M + +G + +++ M+ E
Sbjct: 352 V--------QRKQISEAYEL--FEKMPGKDMVSW-TDMIKGFSGKGEISKCVELFGMMPE 400
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 16/164 (9%)
Query: 279 SYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGS 338
+++E ++ CN+ I A+ G++ +A +FRQM + +IVSW ++I A +G+ S
Sbjct: 39 NFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMS 98
Query: 339 EAVSLFDEMVEQGVEPDDV--SFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIE--H 394
+A +FDEM P V S+ +++A +K D G++Y F +P+
Sbjct: 99 KAWQVFDEM------PVRVTTSYNAMITAMIKNK-CDLGKAY-----ELFCDIPEKNAVS 146
Query: 395 YGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARG 438
Y M+ RAG EA PV+ + +++ + + R
Sbjct: 147 YATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRA 190
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 128/423 (30%), Positives = 223/423 (52%), Gaps = 48/423 (11%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D L+NTL+ A+A + S L+L+ M GV PN T+ ++ LS LR G+
Sbjct: 440 DLILWNTLLAAYAESGLS-GEALRLFYGMQLEGVPPNVITWNLII-----LSLLRNGQ-- 491
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
V D L +Q++ I + ++W+
Sbjct: 492 ----VDEAKDMFLQMQSSGI-------------------------------IPNLISWTT 516
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
M+ G + G S A+ R+MQ G+ P+ ++ L+ACA L +L +G+ + YI +
Sbjct: 517 MMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYI-IRN 575
Query: 286 IPKS--VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSL 343
+ S V + +L+DM+AKCGD++KA +F + ++I A++G EA++L
Sbjct: 576 LQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIAL 635
Query: 344 FDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLS 403
+ + G++PD+++ VLSAC H+ +++ F + + P +EHYG MVDLL+
Sbjct: 636 YRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLA 695
Query: 404 RAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVL 463
AG ++AL + MP +P+ + +S++ +C+ + + +L + +S++LL +EP + NYV
Sbjct: 696 SAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVT 755
Query: 464 LSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNE--MCEFVAGDKSHDQYKQIY 521
+SN YA W++ K+REMM +G+KK PG + I++ E + FVA DK+H + +I
Sbjct: 756 ISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQ 815
Query: 522 EMV 524
M+
Sbjct: 816 MML 818
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 169/351 (48%), Gaps = 16/351 (4%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
+A +N L+ + +++ + ++L+ M + GV P + T L A A + + GK
Sbjct: 238 NAVAWNALMVGYVQNGKNEEA-IRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQS 296
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H + G + D + ++++ Y A VFD + D VTW+
Sbjct: 297 HAIAIVNGMELDNILGTSLLNFYCKVGLIEY-----------AEMVFDRMFEKDVVTWNL 345
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
+I GY ++G A+ + + M++ + D +T+ ++++A A L+LGK ++ Y
Sbjct: 346 IISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHS 405
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
+ L + ++DM+AKCG + A +F ++ W +++ A G EA+ LF
Sbjct: 406 FESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFY 465
Query: 346 EMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRA 405
M +GV P+ +++ ++ + + VD+ + F M+ + GI+P + + M++ + +
Sbjct: 466 GMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GIIPNLISWTTMMNGMVQN 524
Query: 406 GFVKEALDFVRTMP---VEPNQIIWRSIITACHARGELKLGESISKELLRN 453
G +EA+ F+R M + PN ++AC L +G +I ++RN
Sbjct: 525 GCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRN 575
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 148/310 (47%), Gaps = 23/310 (7%)
Query: 134 MLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXX 193
ML + P+ F P V KAC L R G+ VHG VVK G +D + V +++ MY
Sbjct: 164 MLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGV 223
Query: 194 XXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCP 253
A KVFDE P ++V W+A++ GY + G + A+ LF +M+ GV P
Sbjct: 224 LDD-----------ASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEP 272
Query: 254 DEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLF 313
+T+ + L+A A++G +E GK + + L +L++ + K G ++ A +F
Sbjct: 273 TRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVF 332
Query: 314 RQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVD 373
+M +V+W +I G G +A+ + M + ++ D V+ ++SA ++ +
Sbjct: 333 DRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLK 392
Query: 374 KGRSY-----FNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWR 428
G+ +S E + + + +D+ ++ G + +A + VE + I+W
Sbjct: 393 LGKEVQCYCIRHSFESDIVLASTV------MDMYAKCGSIVDAKKVFDS-TVEKDLILWN 445
Query: 429 SIITACHARG 438
+++ A G
Sbjct: 446 TLLAAYAESG 455
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 159/361 (44%), Gaps = 47/361 (13%)
Query: 146 YPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXX 205
Y +L+ C DL GK +H ++K G D + +N I
Sbjct: 73 YGEILQGCVYERDLSTGKQIHARILKNG---DFYARNEYIE------TKLVIFYAKCDAL 123
Query: 206 XLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTAC 265
+A +F + + +W+A+IG R G A+ F EM + PD + +V AC
Sbjct: 124 EIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKAC 183
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
L G+ + Y+ + V + ++L DM+ KCG +D A +F ++ V+W
Sbjct: 184 GALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWN 243
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGR-----SYFN 380
+++VG +G+ EA+ LF +M +QGVEP V+ LSA + V++G+ + N
Sbjct: 244 ALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVN 303
Query: 381 SMEGNFGIVPKIEHYGCMVDLLSRA-------------------------GFVKEALDFV 415
ME + + + ++ C V L+ A G V++A+
Sbjct: 304 GMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMC 363
Query: 416 RTMPVEP---NQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNI---YA 469
+ M +E + + ++++A LKLG+ + +R+ + ES+ VL S + YA
Sbjct: 364 QLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRH--SFESDIVLASTVMDMYA 421
Query: 470 K 470
K
Sbjct: 422 K 422
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 194/360 (53%), Gaps = 17/360 (4%)
Query: 150 LKACAGLSDLRLGKAVHGSVVK---FGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXX 206
LKAC+ + L+ GK H V++ F D D +V+N++I MY
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDID-NVRNSLITMYSRCSDLRH---------- 375
Query: 207 LAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACA 266
A VF + TW+++I G+A S L +EM + G P+ IT+ S+L A
Sbjct: 376 -AFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFA 434
Query: 267 DLGALELGKWLESYIEWKKIPKS-VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
+G L+ GK YI ++ K + L N+L+DM+AK G++ A +F M V++T
Sbjct: 435 RVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYT 494
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
S+I G G+G A++ F +M G++PD V+ + VLSAC HS LV +G F ME
Sbjct: 495 SLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHV 554
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGE- 444
FGI ++EHY CMVDL RAG++ +A D T+P EP+ + +++ AC G +GE
Sbjct: 555 FGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEW 614
Query: 445 SISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEM 504
+ K LL +P H +Y+LL+++YA W + V+ ++ G++K ++E ++E+
Sbjct: 615 AADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 191/442 (43%), Gaps = 60/442 (13%)
Query: 63 GLINNPLVLTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQ 122
GL + +++ K S FN L + T + +N LI ++ +
Sbjct: 113 GLEFDSVLVPKLVTFYSAFN--------LLDEAQTITENSEILHPLPWNVLIGSYIRNKR 164
Query: 123 SKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQN 182
+ S + +Y+ M+ G+ ++FTYP V+KACA L D G+ VHGS+ +L+V N
Sbjct: 165 FQES-VSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCN 223
Query: 183 TMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGL 242
+I MY +A ++FD + D+V+W+A+I Y A L
Sbjct: 224 ALISMYKRFGKVD-----------VARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKL 272
Query: 243 FREMQVMGV-------------CPD----------------------EITMVSVLTACAD 267
M + GV C + + M++ L AC+
Sbjct: 273 LDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSH 332
Query: 268 LGALELGKWLESY-IEWKKIPKSVE-LCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
+GAL+ GK I ++ + N+LI M+++C D+ A +F+Q+++ ++ +W
Sbjct: 333 IGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWN 392
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
S+I G A + R E L EM+ G P+ ++ +L + G+ + +
Sbjct: 393 SIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRR 452
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGES 445
+ + +VD+ +++G + A +M + +++ + S+I G+ ++ +
Sbjct: 453 QSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDGYGRLGKGEVALA 511
Query: 446 ISKELLRN--EPTHESNYVLLS 465
K++ R+ +P H + +LS
Sbjct: 512 WFKDMDRSGIKPDHVTMVAVLS 533
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 110/266 (41%), Gaps = 27/266 (10%)
Query: 109 LFNTLIRAFAHTPQSKSSGLQLYR-----TMLRYGVVPNKF---TYPFVLKACAGLSDLR 160
LFN+ +H QLY ++LRY ++F + +L C G ++
Sbjct: 49 LFNSFRHCISHG--------QLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFV 100
Query: 161 LGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDS 220
G+ +H + G + D + ++ Y A + + S
Sbjct: 101 PGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDE-----------AQTITENSEILHP 149
Query: 221 VTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESY 280
+ W+ +IG Y R +V +++ M G+ DE T SV+ ACA L G+ +
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 281 IEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEA 340
IE ++ +CNALI M+ + G VD A LF +M VSW ++I + EA
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEA 269
Query: 341 VSLFDEMVEQGVEPDDVSFIGVLSAC 366
L D M GVE V++ + C
Sbjct: 270 FKLLDRMYLSGVEASIVTWNTIAGGC 295
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 194/360 (53%), Gaps = 17/360 (4%)
Query: 150 LKACAGLSDLRLGKAVHGSVVK---FGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXX 206
LKAC+ + L+ GK H V++ F D D +V+N++I MY
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDID-NVRNSLITMYSRCSDLRH---------- 375
Query: 207 LAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACA 266
A VF + TW+++I G+A S L +EM + G P+ IT+ S+L A
Sbjct: 376 -AFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFA 434
Query: 267 DLGALELGKWLESYIEWKKIPKS-VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
+G L+ GK YI ++ K + L N+L+DM+AK G++ A +F M V++T
Sbjct: 435 RVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYT 494
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
S+I G G+G A++ F +M G++PD V+ + VLSAC HS LV +G F ME
Sbjct: 495 SLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHV 554
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGE- 444
FGI ++EHY CMVDL RAG++ +A D T+P EP+ + +++ AC G +GE
Sbjct: 555 FGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEW 614
Query: 445 SISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEM 504
+ K LL +P H +Y+LL+++YA W + V+ ++ G++K ++E ++E+
Sbjct: 615 AADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 191/442 (43%), Gaps = 60/442 (13%)
Query: 63 GLINNPLVLTKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQ 122
GL + +++ K S FN L + T + +N LI ++ +
Sbjct: 113 GLEFDSVLVPKLVTFYSAFN--------LLDEAQTITENSEILHPLPWNVLIGSYIRNKR 164
Query: 123 SKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQN 182
+ S + +Y+ M+ G+ ++FTYP V+KACA L D G+ VHGS+ +L+V N
Sbjct: 165 FQES-VSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCN 223
Query: 183 TMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGL 242
+I MY +A ++FD + D+V+W+A+I Y A L
Sbjct: 224 ALISMYKRFGKVD-----------VARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKL 272
Query: 243 FREMQVMGV-------------CPD----------------------EITMVSVLTACAD 267
M + GV C + + M++ L AC+
Sbjct: 273 LDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSH 332
Query: 268 LGALELGKWLESY-IEWKKIPKSVE-LCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
+GAL+ GK I ++ + N+LI M+++C D+ A +F+Q+++ ++ +W
Sbjct: 333 IGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWN 392
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
S+I G A + R E L EM+ G P+ ++ +L + G+ + +
Sbjct: 393 SIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRR 452
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGES 445
+ + +VD+ +++G + A +M + +++ + S+I G+ ++ +
Sbjct: 453 QSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDGYGRLGKGEVALA 511
Query: 446 ISKELLRN--EPTHESNYVLLS 465
K++ R+ +P H + +LS
Sbjct: 512 WFKDMDRSGIKPDHVTMVAVLS 533
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 110/266 (41%), Gaps = 27/266 (10%)
Query: 109 LFNTLIRAFAHTPQSKSSGLQLYR-----TMLRYGVVPNKF---TYPFVLKACAGLSDLR 160
LFN+ +H QLY ++LRY ++F + +L C G ++
Sbjct: 49 LFNSFRHCISHG--------QLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFV 100
Query: 161 LGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDS 220
G+ +H + G + D + ++ Y A + + S
Sbjct: 101 PGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDE-----------AQTITENSEILHP 149
Query: 221 VTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESY 280
+ W+ +IG Y R +V +++ M G+ DE T SV+ ACA L G+ +
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 281 IEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEA 340
IE ++ +CNALI M+ + G VD A LF +M VSW ++I + EA
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEA 269
Query: 341 VSLFDEMVEQGVEPDDVSFIGVLSAC 366
L D M GVE V++ + C
Sbjct: 270 FKLLDRMYLSGVEASIVTWNTIAGGC 295
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 217/428 (50%), Gaps = 22/428 (5%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+N+++ F H Q L+++ M++ V ++ T +L+ C K++HG +
Sbjct: 296 WNSILAGFVHN-QRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVI 354
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
++ G++ + +++I Y AG V D D V+ S MI G
Sbjct: 355 IRRGYESNEVALSSLIDAYTSCSLVDD-----------AGTVLDSMTYKDVVSCSTMISG 403
Query: 230 YARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIP-K 288
A G S A+ +F M+ P+ IT++S+L AC+ L KW + +
Sbjct: 404 LAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAIN 460
Query: 289 SVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMV 348
+ + +++D +AKCG ++ A F Q+ I+SWT +I A++G +A++LFDEM
Sbjct: 461 DISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMK 520
Query: 349 EQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM-EGNFGIVPKIEHYGCMVDLLSRAGF 407
++G P+ V+++ LSAC H LV KG F SM E + P ++HY C+VD+LSRAG
Sbjct: 521 QKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHK--PSLQHYSCIVDMLSRAGE 578
Query: 408 VKEALDFVRTMP--VEPNQIIWRSIITACHAR-GELKLGESISKELLRNEPTHESNYVLL 464
+ A++ ++ +P V+ W +I++ C R +L + + E+L EP S Y+L
Sbjct: 579 IDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLA 638
Query: 465 SNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMV 524
S+ +A + WE +R ++ R ++ V G +M+ N F+AGDK ++ ++V
Sbjct: 639 SSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVV 698
Query: 525 DEMGREIK 532
+ R +K
Sbjct: 699 QSLHRCMK 706
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/454 (25%), Positives = 188/454 (41%), Gaps = 79/454 (17%)
Query: 68 PLVLTKFAATSSTFNAIHYATSFLFSDDPTTAPR---------ASSFDAFLFNTLIRAFA 118
P+V A S F A ++ D + R + S++ +F L F
Sbjct: 49 PIVFKACAKLSWLFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGF- 107
Query: 119 HTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDL 178
+ GL + + +G PN T V+ AC L G+ +HG V++ GF
Sbjct: 108 -----EEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGIS 160
Query: 179 HVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSR 238
VQN+++ MY A K+FDE + D ++WS +I Y +
Sbjct: 161 SVQNSILCMYADSDSLS------------ARKLFDEMSERDVISWSVVIRSYVQSKEPVV 208
Query: 239 AVGLFREM-QVMGVCPDEITMVSVLTACADLGALELGKWLESY-IEWKKIPKSVELCNAL 296
+ LF+EM PD +T+ SVL AC + +++G+ + + I V +CN+L
Sbjct: 209 GLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSL 268
Query: 297 IDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDD 356
IDM++K DVD A +F + IVSW S++ G + R EA+ +F MV++ VE D+
Sbjct: 269 IDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDE 328
Query: 357 VSFIGVLSAC--------CHS---------------------------KLVDKGRSYFNS 381
V+ + +L C C S LVD + +S
Sbjct: 329 VTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDS 388
Query: 382 MEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELK 441
M + M+ L+ AG EA+ M PN I S++ AC +L+
Sbjct: 389 M-----TYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLR 443
Query: 442 L-----GESISKELLRNEPTHESNYVLLSNIYAK 470
G +I + L N+ + ++ V + YAK
Sbjct: 444 TSKWAHGIAIRRSLAINDISVGTSIV---DAYAK 474
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/444 (29%), Positives = 214/444 (48%), Gaps = 61/444 (13%)
Query: 138 GVVPNKFTYPFVLKACAGLSD--LRLGKAVHGSVVKFGF---DDDLHVQNTMIHMYXXXX 192
V PN T + AC GL RLG+ +H V+ G+ D D + +++HMY
Sbjct: 294 AVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSG 353
Query: 193 XXXXXXXXXXXXXXL------------------AGKVFDESPKT-DSVTWSAMIGGYARR 233
L A +F+ D V+W++MI GY
Sbjct: 354 LIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEA 413
Query: 234 GHSSRAVGLFREMQ--------VM-----------------------GVCPDEITMVSVL 262
G SRA GLF+++ VM G+ P T +L
Sbjct: 414 GDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLL 473
Query: 263 TACADLGALELGKWLESYIEWKKIPKSVELC--NALIDMFAKCGDVDKAMNLFRQMDSCT 320
++ L+ GK + I +L N+L+ M+AKCG ++ A +F +M
Sbjct: 474 SSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKD 533
Query: 321 IVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFN 380
VSW S+I+GL+ HG +A++LF EM++ G +P+ V+F+GVLSAC HS L+ +G F
Sbjct: 534 TVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFK 593
Query: 381 SMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGEL 440
+M+ + I P I+HY M+DLL RAG +KEA +F+ +P P+ ++ +++ C
Sbjct: 594 AMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRD 653
Query: 441 KLGESISK----ELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGST 496
K E I++ LL +P + +V L N+YA L R + + ++R+ M ++G+KK PG +
Sbjct: 654 KDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCS 713
Query: 497 MIELNNEMCEFVAGDKSHDQYKQI 520
+ +N F++GDKS + Q+
Sbjct: 714 WVVVNGRANVFLSGDKSASEAAQM 737
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 115/241 (47%), Gaps = 15/241 (6%)
Query: 130 LYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFG--FDDDLHVQNTMIHM 187
L M+R G+ P TY +L + S+L GK +H + K +D DL +QN+++ M
Sbjct: 453 LLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSM 512
Query: 188 YXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQ 247
Y A ++F + + D+V+W++MI G + G + +A+ LF+EM
Sbjct: 513 YAKCGAIED-----------AYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEML 561
Query: 248 VMGVCPDEITMVSVLTACADLGALELG-KWLESYIEWKKIPKSVELCNALIDMFAKCGDV 306
G P+ +T + VL+AC+ G + G + ++ E I ++ ++ID+ + G +
Sbjct: 562 DSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKL 621
Query: 307 DKAMNLFRQMDSCTIVSWTSVIVGL-AMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSA 365
+A + + ++GL ++ R +A + + + +E D V+ G ++
Sbjct: 622 KEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVAL 681
Query: 366 C 366
C
Sbjct: 682 C 682
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 129/313 (41%), Gaps = 70/313 (22%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQ--VMGVCPDEITMVSVLTAC 265
A ++F E P+ + V+W+AMI G+A A+ LF EM+ V V P+ T++S+ AC
Sbjct: 250 AYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYAC 309
Query: 266 ADLGA--LELGKWLESYI---EWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQ---MD 317
LG LG+ L + + W+ + L +L+ M+A G + A +L + +
Sbjct: 310 GGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQ 369
Query: 318 SCTI---------------------------VSWTS------------------------ 326
SC I VSWTS
Sbjct: 370 SCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK 429
Query: 327 -------VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYF 379
+I GL + +EA SL +MV G++P + ++ +LS+ + +D+G+
Sbjct: 430 DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIH 489
Query: 380 NSMEGNFGIV-PKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARG 438
+ P + +V + ++ G +++A + M V+ + + W S+I G
Sbjct: 490 CVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM-VQKDTVSWNSMIMGLSHHG 548
Query: 439 ELKLGESISKELL 451
++ KE+L
Sbjct: 549 LADKALNLFKEML 561
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A ++FDE P+ + V+W+ ++ G R G +A +F M D ++ +++ +
Sbjct: 157 AVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMP----SRDVVSWNAMIKGYIE 212
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSV 327
+E K L + K+V +++ + + GDV +A LF +M IVSWT++
Sbjct: 213 NDGMEEAKLLFGDMS----EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAM 268
Query: 328 IVGLAMHGRGSEAVSLFDEMVE--QGVEPDDVSFIGVLSAC 366
I G A + EA+ LF EM + V P+ + I + AC
Sbjct: 269 ISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYAC 309
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 105/230 (45%), Gaps = 23/230 (10%)
Query: 208 AGKVFDESPKTDSVT----WSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLT 263
A + D+ P+ S+ W++++ YA+ G+ A LF M + +T ++LT
Sbjct: 61 ARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNI----VTCNAMLT 116
Query: 264 ACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVS 323
G ++ + E++ ++++PK+V ++ G + A+ LF +M +VS
Sbjct: 117 -----GYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVS 171
Query: 324 WTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSME 383
W +++ GL +G +A +FD M + D VS+ ++ + +++ + F M
Sbjct: 172 WNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIENDGMEEAKLLFGDMS 227
Query: 384 GNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITA 433
+ + MV R G V+EA MP E N + W ++I+
Sbjct: 228 EK-----NVVTWTSMVYGYCRYGDVREAYRLFCEMP-ERNIVSWTAMISG 271
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 204/397 (51%), Gaps = 17/397 (4%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKF-TYPFVLKACAGLSDLRLGKA 164
D +N++I A + S L+ ++ M R G + + T + A L + G+
Sbjct: 544 DLTSWNSVISGCASSGHHLES-LRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRC 602
Query: 165 VHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWS 224
HG +K + D +QNT+I MY A KVF + +W+
Sbjct: 603 FHGLAIKSLRELDTQLQNTLITMYGRCKDIES-----------AVKVFGLISDPNLCSWN 651
Query: 225 AMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWK 284
+I ++ LFR +++ P+EIT V +L+A LG+ G ++ +
Sbjct: 652 CVISALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSASTQLGSTSYGMQAHCHLIRR 708
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLF 344
+ + AL+DM++ CG ++ M +FR +I +W SVI HG G +A+ LF
Sbjct: 709 GFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELF 768
Query: 345 DEMVEQG-VEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLS 403
E+ +EP+ SFI +LSAC HS +D+G SY+ ME FG+ P EH +VD+L
Sbjct: 769 KELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLG 828
Query: 404 RAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVL 463
RAG ++EA +F+ + +W ++++AC+ G+ KLG+ +++ L EP + S Y+
Sbjct: 829 RAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYIS 888
Query: 464 LSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIEL 500
L+N Y L WE+ ++R+M++ +KK+PG ++I++
Sbjct: 889 LANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 169/355 (47%), Gaps = 44/355 (12%)
Query: 106 DAFLFNTLI-RAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKA 164
D +NT++ + A+ KS LQ +++M G + T+ V+ AC+ + +L LG++
Sbjct: 253 DIVSWNTIMTKCLANGHPRKS--LQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGES 310
Query: 165 VHGSVVKFGFDDDLHVQ--NTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVT 222
+HG V+K G+ + HV N++I MY A VF+E D ++
Sbjct: 311 LHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEA-----------AETVFEELVCRDVIS 359
Query: 223 WSAMIGGYARRGHSSRAVGLFREMQ-VMGVCPDEITMVSVLTACADLGALELGKWLESY- 280
+A++ G+A G A G+ +MQ V + PD T+VS+ + C DL G+ + Y
Sbjct: 360 SNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYT 419
Query: 281 IEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEA 340
+ + +++E+ N++IDM+ KCG +A LF+ +VSW S+I + +G +A
Sbjct: 420 VRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKA 479
Query: 341 VSLFDEMV-EQGVEPDDVS-FIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCM 398
+LF E+V E +S + +L++C S + G+S C
Sbjct: 480 KNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVH-----------------CW 522
Query: 399 VDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGE----LKLGESISKE 449
L + G + A + TM + W S+I+ C + G L+ +++S+E
Sbjct: 523 ---LQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSRE 574
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 13/257 (5%)
Query: 215 SPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMG-VCPDEITMVSVLTACADLGALEL 273
S D +W+++I G A GH ++ F+ M G + D IT++ ++A +LG +
Sbjct: 540 SETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQ 599
Query: 274 GKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAM 333
G+ +L N LI M+ +C D++ A+ +F + + SW VI L+
Sbjct: 600 GRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQ 659
Query: 334 HGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKG-RSYFNSMEGNFGIVPKI 392
+ G E LF + +EP++++F+G+LSA G +++ + + F P +
Sbjct: 660 NKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFV 716
Query: 393 EHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQI-IWRSIITACHARGELKLGESISKELL 451
+VD+ S G ++ + R V N I W S+I+A G + + KEL
Sbjct: 717 S--AALVDMYSSCGMLETGMKVFRNSGV--NSISAWNSVISAHGFHGMGEKAMELFKELS 772
Query: 452 RN---EPTHESNYVLLS 465
N EP S LLS
Sbjct: 773 SNSEMEPNKSSFISLLS 789
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 117/247 (47%), Gaps = 10/247 (4%)
Query: 211 VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGA 270
VF D V+W+ ++ GH +++ F+ M G D +T V++AC+ +
Sbjct: 245 VFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEE 304
Query: 271 LELGKWLESY-IEWKKIPKS-VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVI 328
L LG+ L I+ P++ V + N++I M++KCGD + A +F ++ ++S +++
Sbjct: 305 LTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAIL 364
Query: 329 VGLAMHGRGSEAVSLFDEMVE-QGVEPDDVSFIGVLSACCHSKLVDKGRS---YFNSMEG 384
G A +G EA + ++M ++PD + + + S C +GR+ Y ME
Sbjct: 365 NGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEM 424
Query: 385 NFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGE 444
+E ++D+ + G +A +T + + W S+I+A G +
Sbjct: 425 Q---SRALEVINSVIDMYGKCGLTTQAELLFKT-TTHRDLVSWNSMISAFSQNGFTHKAK 480
Query: 445 SISKELL 451
++ KE++
Sbjct: 481 NLFKEVV 487
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 11/204 (5%)
Query: 163 KAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVT 222
++VH +K G DL + ++ Y + +FDE + D +
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVS-----------SSCLFDELKEKDVIV 155
Query: 223 WSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIE 282
W++MI + G AVGLF EM G D T++ +A + L L
Sbjct: 156 WNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAI 215
Query: 283 WKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVS 342
+ LCNAL++++AK ++ A +F M+ IVSW +++ +G +++
Sbjct: 216 ETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQ 275
Query: 343 LFDEMVEQGVEPDDVSFIGVLSAC 366
F M G E D V+F V+SAC
Sbjct: 276 YFKSMTGSGQEADTVTFSCVISAC 299
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/405 (30%), Positives = 204/405 (50%), Gaps = 14/405 (3%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +N LI + + + +K L + M + P+++T V+ C+ L +L GK
Sbjct: 199 DVVSWNCLILSCSDSG-NKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQA 257
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
+K GF + V I M+ K+F E K DSV ++
Sbjct: 258 LALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSV-----------KLFRELEKWDSVLCNS 306
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
MIG Y+ A+ LF V PD+ T SVL++ + L+ G + S +
Sbjct: 307 MIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS-MNAVMLDHGADVHSLVIKLG 365
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
+ +L++M+ K G VD AM +F + D ++ W +VI+GLA + R E++++F+
Sbjct: 366 FDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFN 425
Query: 346 EMV-EQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSR 404
+++ Q ++PD V+ +G+L ACC++ V++G F+SME G+ P EHY C+++LL R
Sbjct: 426 QLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCR 485
Query: 405 AGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLL 464
G + EA D +P EP+ IW I+ A G+ +L E+++K +L +EP Y++L
Sbjct: 486 VGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVL 545
Query: 465 SNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVA 509
IY RWE K+R M+ +K GS+ I + + + F A
Sbjct: 546 IKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEA 590
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 101/213 (47%), Gaps = 7/213 (3%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEIT--MVSVLTAC 265
A +FDE P+ D V+W+ MI G G + +F +MQ + P E T +++ L C
Sbjct: 89 ALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTC 148
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
G G + S + ++ + N+++DM+ + G D A+++F M+ +VSW
Sbjct: 149 VRHGEQIHGNAICSGVS----RYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWN 204
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
+I+ + G A+ F M E ++PD+ + V+S C + + KG+ ++
Sbjct: 205 CLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQAL-ALCIK 263
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTM 418
G + G +D+ S+ + +++ R +
Sbjct: 264 MGFLSNSIVLGAGIDMFSKCNRLDDSVKLFREL 296
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 173/294 (58%), Gaps = 2/294 (0%)
Query: 207 LAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACA 266
LA F+++P+ +V+W+++I Y + AV LF M + G PD T+ S+L+A
Sbjct: 361 LARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAST 420
Query: 267 DLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD-SCTIVSWT 325
L L LG + + IP V + NALI M+++CG++ ++ +F +M +++W
Sbjct: 421 GLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWN 479
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
++I G A HG SEA++LF M G+ P ++F+ VL+AC H+ LVD+ ++ F SM
Sbjct: 480 AMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSV 539
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGES 445
+ I P++EHY +V++ S G +EA+ + +MP EP++ +W +++ AC + L
Sbjct: 540 YKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHV 599
Query: 446 ISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIE 499
++ + R EP + YVLL N+YA + W++ ++VR M+ + +KK GS+ ++
Sbjct: 600 AAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 105/209 (50%), Gaps = 15/209 (7%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+N++I A+ K + + L+ M G P+ T +L A GL +LRLG +H V
Sbjct: 377 WNSIIAAYEKNKDYKEA-VDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIV 435
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESP-KTDSVTWSAMIG 228
VK D+ V N +I MY + ++FDE K + +TW+AMIG
Sbjct: 436 VKTVI-PDVPVHNALITMYSRCGEIME-----------SRRIFDEMKLKREVITWNAMIG 483
Query: 229 GYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGK-WLESYIEWKKIP 287
GYA G++S A+ LF M+ G+ P IT VSVL ACA G ++ K S + KI
Sbjct: 484 GYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIE 543
Query: 288 KSVELCNALIDMFAKCGDVDKAMNLFRQM 316
+E ++L+++ + G ++AM + M
Sbjct: 544 PQMEHYSSLVNVTSGQGQFEEAMYIITSM 572
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 122/300 (40%), Gaps = 60/300 (20%)
Query: 211 VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCP--------------DEI 256
+F++ P+ ++V+WSAMI G+ + G AV LFR+M V P E
Sbjct: 158 LFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEA 217
Query: 257 TMV-----SVLTACADL----GALELGKWLESYIE-----WKKIP--------------- 287
V S+++ DL L +G +E + +IP
Sbjct: 218 AWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERF 277
Query: 288 -KSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDE 346
K+V N++I + K GDV A LF QM +SW ++I G R +A +LF E
Sbjct: 278 CKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSE 337
Query: 347 MVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAG 406
M + D S+ ++S V+ R YF + + ++ +
Sbjct: 338 MPNR----DAHSWNMMVSGYASVGNVELARHYFEKTPEKHTV-----SWNSIIAAYEKNK 388
Query: 407 FVKEALDFVRTMPVE---PNQIIWRSIITACHARGELKLG----ESISKELLRNEPTHES 459
KEA+D M +E P+ S+++A L+LG + + K ++ + P H +
Sbjct: 389 DYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNA 448
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 7/148 (4%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A +F++ ++VTW+ MI GY +R ++A LF M V TM+S +C
Sbjct: 59 ARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWN-TMISGYVSCGG 117
Query: 268 LGALELGKWLESYIEWKKIPKSVELC-NALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTS 326
+ LE + L + ++P N +I +AK + +A+ LF +M VSW++
Sbjct: 118 IRFLEEARKL-----FDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSA 172
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEP 354
+I G +G AV LF +M + P
Sbjct: 173 MITGFCQNGEVDSAVVLFRKMPVKDSSP 200
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 174/298 (58%), Gaps = 7/298 (2%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A +F D V W+ +I GYA+ G+S A+ F MQ G PD +T+ S+L+ACA
Sbjct: 227 ARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQ 286
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSV 327
G L++G+ + S I + I + + NALIDM+AKCGD++ A ++F + ++ S+
Sbjct: 287 SGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSM 346
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG 387
I LA+HG+G EA+ +F M ++PD+++FI VL+AC H + +G F+ M+
Sbjct: 347 ISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-D 405
Query: 388 IVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESIS 447
+ P ++H+GC++ LL R+G +KEA V+ M V+PN + +++ AC + ++ E +
Sbjct: 406 VKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVM 465
Query: 448 KEL-----LRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIEL 500
K + + N + E++ +SN+YA RW+ +R M+ RG++K PG + + L
Sbjct: 466 KIIETAGSITNSYS-ENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSLVL 522
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 170/392 (43%), Gaps = 80/392 (20%)
Query: 123 SKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGL-SDLRLGKAVHGSVVKFGFDDDLHVQ 181
S L LY + R GV + P +L+ACA + + LGK +H +KFG D+ V
Sbjct: 26 SPIQALVLYGGIRRRGVYFPGWV-PLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVG 84
Query: 182 NTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVG 241
+++I MY A KVFDE P+ + TW+AMIGGY G + A G
Sbjct: 85 SSLISMYGKCGCVVS-----------ARKVFDEMPERNVATWNAMIGGYMSNGDAVLASG 133
Query: 242 LFREMQVMGVCPDEITMVSVLTACADLGALELGK---------------W---LESYIEW 283
LF E+ VC + +T + ++ +E + W L Y+
Sbjct: 134 LFEEIS---VCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNN 190
Query: 284 KK----------IP-KSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLA 332
+K IP K+ + + ++ + + GDV +A +F ++ + +V W ++I G A
Sbjct: 191 RKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYA 250
Query: 333 MHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGI---- 388
+G +A+ F M +G EPD V+ +LSAC S +D GR +S+ + GI
Sbjct: 251 QNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGRE-VHSLINHRGIELNQ 309
Query: 389 ---------------------------VPKIEHYGCMVDLLSRAGFVKEALDFVRTMP-- 419
V + M+ L+ G KEAL+ TM
Sbjct: 310 FVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESL 369
Query: 420 -VEPNQIIWRSIITACHARGELKLGESISKEL 450
++P++I + +++TAC G L G I E+
Sbjct: 370 DLKPDEITFIAVLTACVHGGFLMEGLKIFSEM 401
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 108/250 (43%), Gaps = 19/250 (7%)
Query: 101 RASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLR 160
R + D ++NTLI +A S + + + M G P+ T +L ACA L
Sbjct: 233 RVFARDLVIWNTLIAGYAQNGYSDDA-IDAFFNMQGEGYEPDAVTVSSILSACAQSGRLD 291
Query: 161 LGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDS 220
+G+ VH + G + + V N +I MY A VF+
Sbjct: 292 VGREVHSLINHRGIELNQFVSNALIDMYAKCGDLEN-----------ATSVFESISVRSV 340
Query: 221 VTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESY 280
++MI A G A+ +F M+ + + PDEIT ++VLTAC G L G + S
Sbjct: 341 ACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSE 400
Query: 281 IEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEA 340
++ + + +V+ LI + + G + +A L ++M V ++G + G+
Sbjct: 401 MKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMH----VKPNDTVLGALL---GACK 453
Query: 341 VSLFDEMVEQ 350
V + EM EQ
Sbjct: 454 VHMDTEMAEQ 463
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 130/401 (32%), Positives = 204/401 (50%), Gaps = 28/401 (6%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +N L+ F + K + L ++ M R V ++FT V+K CA L L+ GK V
Sbjct: 149 DLVSWNALLSGFLRNGKGKEA-LGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQV 207
Query: 166 HGSVVKFGFDDDLHVQNT-MIHMYXXXXXXXXXXXXXXXXXXLAGKVFDE-SPKTDSVTW 223
H VV G DL V T MI Y A KV++ + TD V
Sbjct: 208 HAMVVVTG--RDLVVLGTAMISFYSSVGLINE-----------AMKVYNSLNVHTDEVML 254
Query: 224 SAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEW 283
+++I G R + A L + P+ + S L C+D L +GK +
Sbjct: 255 NSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSDNSDLWIGKQIHCVALR 309
Query: 284 KKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSL 343
+LCN L+DM+ KCG + +A +FR + S ++VSWTS+I A++G G +A+ +
Sbjct: 310 NGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEI 369
Query: 344 FDEMVEQ--GVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDL 401
F EM E+ GV P+ V+F+ V+SAC H+ LV +G+ F M+ + +VP EHY C +D+
Sbjct: 370 FREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDI 429
Query: 402 LSRAGFVKEALDFVRTMPVEPNQ----IIWRSIITACHARGELKLGESISKELLRNE-PT 456
LS+AG +E V M NQ IW ++++AC +L GE +++ L+ P
Sbjct: 430 LSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPE 489
Query: 457 HESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTM 497
+ S YVL+SN YA + +W+ ++R + +G+ K G ++
Sbjct: 490 NASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHSL 530
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 111/231 (48%), Gaps = 10/231 (4%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPD--EITMVSVLTAC 265
A +FDE P+ D + ++ + + R G+ + + LF +Q+ PD T VL AC
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALF--LQIHRASPDLSSHTFTPVLGAC 94
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
+ L E G+ + + + + ALIDM++K G + ++ +F ++ +VSW
Sbjct: 95 SLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWN 154
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSY--FNSME 383
+++ G +G+G EA+ +F M + VE + + V+ C K++ +G+ +
Sbjct: 155 ALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVT 214
Query: 384 GNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITAC 434
G +V M+ S G + EA+ ++ V ++++ S+I+ C
Sbjct: 215 GRDLVVLGT----AMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGC 261
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 106/464 (22%), Positives = 185/464 (39%), Gaps = 81/464 (17%)
Query: 145 TYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXX 204
T+ VL AC+ LS G+ VH ++K G + + +I MY
Sbjct: 86 TFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSV------ 139
Query: 205 XXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTA 264
+VF+ + D V+W+A++ G+ R G A+G+F M V E T+ SV+
Sbjct: 140 -----RVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKT 194
Query: 265 CADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTI-VS 323
CA L L+ GK + + + V L A+I ++ G +++AM ++ ++ T V
Sbjct: 195 CASLKILQQGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVM 253
Query: 324 WTSVIVGLAMHGRGSEAVSLFDEMVEQ---------GVEPDDVSFIGVLSACC------- 367
S+I G + EA L G + +IG C
Sbjct: 254 LNSLISGCIRNRNYKEAFLLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFV 313
Query: 368 -HSKLVD-------------KGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALD 413
SKL + + R+ F ++ + + M+D + G +AL+
Sbjct: 314 SDSKLCNGLMDMYGKCGQIVQARTIFRAIPSK-----SVVSWTSMIDAYAVNGDGVKALE 368
Query: 414 FVRTMPVE-----PNQIIWRSIITACHARGELKLGE---SISKELLRNEPTHESNYVLLS 465
R M E PN + + +I+AC G +K G+ + KE R P E +YV
Sbjct: 369 IFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTE-HYVCFI 427
Query: 466 NIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMI------ELNNEMC--EFVA-------G 510
+I +K E+ ++ E M + +P + + LN ++ E+VA G
Sbjct: 428 DILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETG 487
Query: 511 DKSHDQYKQI---------YEMVDEMGREIKRAGYVPTTSQVLL 545
++ Y + +++V+E+ ++K G V T L
Sbjct: 488 PENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHSLF 531
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 191/335 (57%), Gaps = 3/335 (0%)
Query: 211 VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMG-VCPDEITMVSVLTACADLG 269
+FD P+ + ++W+ MI GY + A+ +F +M G V P+ T VS+L+AC+DL
Sbjct: 286 LFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLA 345
Query: 270 ALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCT--IVSWTSV 327
L G+ + I K+ + +AL++M++K G++ A +F C ++SW S+
Sbjct: 346 GLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSM 405
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG 387
I A HG G EA+ ++++M + G +P V+++ +L AC H+ LV+KG +F + +
Sbjct: 406 IAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDES 465
Query: 388 IVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESIS 447
+ + EHY C+VDL RAG +K+ +F+ ++ + +I++AC+ E+ + + +
Sbjct: 466 LPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVV 525
Query: 448 KELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEF 507
K++L YVL+SNIYA + E+ ++R M +G+KK PG + +++ + F
Sbjct: 526 KKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLF 585
Query: 508 VAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQ 542
V GDKSH Q++ + ++ ++ ++++ V + ++
Sbjct: 586 VVGDKSHPQFEALDSILSDLRNKMRKNKNVTSDAE 620
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 160/344 (46%), Gaps = 38/344 (11%)
Query: 207 LAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACA 266
+A +F E P+ + V+W+ MI GYA+ G +A+ LF EM + ++ S++ A
Sbjct: 127 IAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALV 182
Query: 267 DLGALELGKWLESYIEWKKIP-KSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
G ++ E+ ++++P + V A++D AK G VD+A LF M I+SW
Sbjct: 183 QRGRID-----EAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWN 237
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM-EG 384
++I G A + R EA LF M E+ D S+ +++ ++ ++K F+ M E
Sbjct: 238 AMITGYAQNNRIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRMPEK 293
Query: 385 NFGIVPKIEHYGCMVDLLSRAGFVKEALD----FVRTMPVEPNQIIWRSIITACHARGEL 440
N + + M+ +EAL+ +R V+PN + SI++AC L
Sbjct: 294 N------VISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGL 347
Query: 441 KLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIEL 500
G+ I + L ++ H+ N ++ S + + + R+M D G+ V +I
Sbjct: 348 VEGQQIHQ--LISKSVHQKNEIVTSALLNMYSKSGELIAARKMFD-NGL--VCQRDLISW 402
Query: 501 NNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVL 544
N+ +A H K+ EM ++M ++ G+ P+ L
Sbjct: 403 NS----MIAVYAHHGHGKEAIEMYNQM----RKHGFKPSAVTYL 438
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 107/228 (46%), Gaps = 21/228 (9%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A K+FD P+ D VTW+ +I GY + G A LF + MVS
Sbjct: 65 ARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQ 124
Query: 268 LGALELGKWLESYIEWKKIP-KSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTS 326
L E+ ++++P ++V N +ID +A+ G +DKA+ LF +M IVSW S
Sbjct: 125 LSIAEM--------LFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNS 176
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM-EGN 385
++ L GR EA++LF+ M + V VS+ ++ + VD+ R F+ M E N
Sbjct: 177 MVKALVQRGRIDEAMNLFERMPRRDV----VSWTAMVDGLAKNGKVDEARRLFDCMPERN 232
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITA 433
I + M+ ++ + EA + MP E + W ++IT
Sbjct: 233 ------IISWNAMITGYAQNNRIDEADQLFQVMP-ERDFASWNTMITG 273
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 116/247 (46%), Gaps = 17/247 (6%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVV-PNKFTYPFVLKACAGLSDLRLGKAVHGS 168
+ T+I + +++ + L ++ MLR G V PN TY +L AC+ L+ L G+ +H
Sbjct: 298 WTTMITGYVENKENEEA-LNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQL 356
Query: 169 VVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESP--KTDSVTWSAM 226
+ K + V + +++MY A K+FD + D ++W++M
Sbjct: 357 ISKSVHQKNEIVTSALLNMYSKSGELIA-----------ARKMFDNGLVCQRDLISWNSM 405
Query: 227 IGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELG-KWLESYIEWKK 285
I YA GH A+ ++ +M+ G P +T +++L AC+ G +E G ++ + + +
Sbjct: 406 IAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDES 465
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVS-WTSVIVGLAMHGRGSEAVSLF 344
+P E L+D+ + G + N D+ S + +++ +H S A +
Sbjct: 466 LPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVV 525
Query: 345 DEMVEQG 351
+++E G
Sbjct: 526 KKVLETG 532
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 296 LIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPD 355
LI K G + +A LF + +V+WT VI G G EA LFD + + +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSR---KN 108
Query: 356 DVSFIGVLSACCHSKLVDKGRSYFNSM-EGNFGIVPKIEHYGCMVDLLSRAGFVKEALDF 414
V++ ++S SK + F M E N + + M+D +++G + +AL+
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEMLFQEMPERN------VVSWNTMIDGYAQSGRIDKALEL 162
Query: 415 VRTMPVEPNQIIWRSIITACHARGEL 440
MP E N + W S++ A RG +
Sbjct: 163 FDEMP-ERNIVSWNSMVKALVQRGRI 187
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/342 (32%), Positives = 180/342 (52%), Gaps = 22/342 (6%)
Query: 144 FTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXX 203
FT+ +L AC + GK +H + K + D+ V +++MY
Sbjct: 246 FTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSD------- 294
Query: 204 XXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLT 263
A + F+ + V+W+AMI G+A+ G A+ LF +M + + PDE+T SVL+
Sbjct: 295 ----ARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLS 350
Query: 264 ACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVS 323
+CA A+ K +++ + K + + N+LI +++ G++ +A+ F + +VS
Sbjct: 351 SCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVS 410
Query: 324 WTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSME 383
WTSVI LA HG E++ +F+ M+ Q ++PD ++F+ VLSAC H LV +G F M
Sbjct: 411 WTSVIGALASHGFAEESLQMFESML-QKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMT 469
Query: 384 GNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACH---ARGEL 440
+ I + EHY C++DLL RAGF+ EA D + +MP EP+ + C+ R +
Sbjct: 470 EFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESM 529
Query: 441 KLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVRE 482
K G +K+LL EPT NY +LSN Y W Q +R+
Sbjct: 530 KWG---AKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRK 568
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 161/390 (41%), Gaps = 29/390 (7%)
Query: 108 FLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHG 167
F F R F Q+ S LQ RT+ P + V K A L L K HG
Sbjct: 3 FTFLRSTRIFLANHQNHLSSLQNIRTIPSSSSSPVAISS--VSKLSASLDHLSDVKQEHG 60
Query: 168 SVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMI 227
+VK G + L +QN ++ Y A K+FDE P + VTW+ +I
Sbjct: 61 FMVKQGIYNSLFLQNKLLQAYTKIREFDD-----------ADKLFDEMPLRNIVTWNILI 109
Query: 228 GGYARR-GHSSRAVGL----FREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIE 282
G +R G ++ L + V D ++ + ++ C D ++ G L +
Sbjct: 110 HGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMV 169
Query: 283 WKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVS 342
+ + S +L+ + KCG + +A +F + +V W +++ ++G EA
Sbjct: 170 KQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFG 229
Query: 343 LFDEMV--EQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVD 400
L M + D +F +LSAC +++G+ +++ I +++
Sbjct: 230 LLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQ-IHAILFKVSYQFDIPVATALLN 284
Query: 401 LLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESI-SKELLRNEPTHES 459
+ +++ + +A + +M V N + W ++I GE + + + LL N E
Sbjct: 285 MYAKSNHLSDARECFESMVVR-NVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDEL 343
Query: 460 NYVLLSNIYAKLRR-WEQKTKVREMMDMRG 488
+ + + AK WE K +V+ M+ +G
Sbjct: 344 TFASVLSSCAKFSAIWEIK-QVQAMVTKKG 372
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 190/408 (46%), Gaps = 59/408 (14%)
Query: 128 LQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVV----------------- 170
L +R M + G+ + F P +LKA L D GK +H V+
Sbjct: 102 LDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDM 161
Query: 171 --KFG--------FDD----DLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGK------ 210
KFG F D DL V N MI Y L K
Sbjct: 162 YSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITW 221
Query: 211 ----------------------VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQV 248
+ + K D V+W+++I G + +A F++M
Sbjct: 222 NALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLT 281
Query: 249 MGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDK 308
G+ P+ T++++L AC L ++ GK + Y + + +AL+DM+ KCG + +
Sbjct: 282 HGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISE 341
Query: 309 AMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCH 368
AM LFR+ T V++ S+I A HG +AV LFD+M G + D ++F +L+AC H
Sbjct: 342 AMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSH 401
Query: 369 SKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWR 428
+ L D G++ F M+ + IVP++EHY CMVDLL RAG + EA + ++ M +EP+ +W
Sbjct: 402 AGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWG 461
Query: 429 SIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQ 476
+++ AC G ++L +K L EP + N +LL+++YA WE
Sbjct: 462 ALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWES 509
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 114/232 (49%), Gaps = 14/232 (6%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D + ++I H Q++ + ++ ML +G+ PN T +L AC L+ ++ GK +
Sbjct: 252 DVVSWTSIISGLVHNFQNEKA-FDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEI 310
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
HG V G +D V++ ++ MY A +F ++PK +VT+++
Sbjct: 311 HGYSVVTGLEDHGFVRSALLDMYGKCGFISE-----------AMILFRKTPKKTTVTFNS 359
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWK- 284
MI YA G + +AV LF +M+ G D +T ++LTAC+ G +LG+ L ++ K
Sbjct: 360 MIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKY 419
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD-SCTIVSWTSVIVGLAMHG 335
+I +E ++D+ + G + +A + + M + W +++ HG
Sbjct: 420 RIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHG 471
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 114/242 (47%), Gaps = 4/242 (1%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A KVFDE PK D MIG AR G+ ++ FREM G+ D + S+L A +
Sbjct: 70 ARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRN 129
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSV 327
L E GK + + + ++LIDM++K G+V A +F + +V + ++
Sbjct: 130 LLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAM 189
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG 387
I G A + + EA++L +M G++PD +++ ++S H + +K M + G
Sbjct: 190 ISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLD-G 248
Query: 388 IVPKIEHYGCMVDLLSRAGFVKEALDFVRTM---PVEPNQIIWRSIITACHARGELKLGE 444
P + + ++ L ++A D + M + PN +++ AC +K G+
Sbjct: 249 YKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGK 308
Query: 445 SI 446
I
Sbjct: 309 EI 310
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 211/398 (53%), Gaps = 17/398 (4%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +N +I + + +S L++ ML G P+ FT+ +L+A + L + +
Sbjct: 178 DLVSWNAMIDGYTANACADTS-FSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSEL 236
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
HG +K GF + ++++ Y A K+ + + K D ++ +A
Sbjct: 237 HGLAIKLGFGRSSALIRSLVNAYVKCGSLAN-----------AWKLHEGTKKRDLLSCTA 285
Query: 226 MIGGYARRGH-SSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESY-IEW 283
+I G++++ + +S A +F++M M DE+ + S+L C + ++ +G+ + + ++
Sbjct: 286 LITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKS 345
Query: 284 KKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSL 343
+I V L N+LIDM+AK G+++ A+ F +M + SWTS+I G HG +A+ L
Sbjct: 346 SQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDL 405
Query: 344 FDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLS 403
++ M + ++P+DV+F+ +LSAC H+ + G +++M GI + EH C++D+L+
Sbjct: 406 YNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLA 465
Query: 404 RAGFVKEALDFVRTMP--VEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNY 461
R+G+++EA +R+ V + W + + AC G ++L + + +LL EP NY
Sbjct: 466 RSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNY 525
Query: 462 VLLSNIYAKLRRWEQKTKVREMMDMRG-MKKVPGSTMI 498
+ L+++YA W+ R++M G K PG +++
Sbjct: 526 INLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 111/220 (50%), Gaps = 11/220 (5%)
Query: 146 YPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXX 205
Y LK C+ + + +HG+ + GF +L +++ +I +Y
Sbjct: 15 YLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKH--------- 65
Query: 206 XLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTAC 265
A K+FD K D V+W+AMI ++R G+ A+ LF+EM V ++ T SVL +C
Sbjct: 66 --ARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSC 123
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
DLG L+ G + +E ++ + +AL+ ++A+CG +++A F M +VSW
Sbjct: 124 KDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWN 183
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSA 365
++I G + + SLF M+ +G +PD +F +L A
Sbjct: 184 AMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 155/381 (40%), Gaps = 47/381 (12%)
Query: 101 RASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLR 160
R S D + +I F+ + L L++ M R V N+FTY VLK+C L L+
Sbjct: 72 RISKRDVVSWTAMISRFSRCGYHPDA-LLLFKEMHREDVKANQFTYGSVLKSCKDLGCLK 130
Query: 161 LGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDS 220
G +HGSV K +L V++ ++ +Y A FD + D
Sbjct: 131 EGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEE-----------ARLQFDSMKERDL 179
Query: 221 VTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESY 280
V+W+AMI GY + + LF+ M G PD T S+L A + LE+ L
Sbjct: 180 VSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGL 239
Query: 281 IEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGR-GSE 339
+S L +L++ + KCG + A L ++S T++I G + S+
Sbjct: 240 AIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSD 299
Query: 340 AVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYF----------------NSME 383
A +F +M+ + D+V +L C V GR NS+
Sbjct: 300 AFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLI 359
Query: 384 GNFGIVPKIE---------------HYGCMVDLLSRAGFVKEALDFVRTMP---VEPNQI 425
+ +IE + ++ R G ++A+D M ++PN +
Sbjct: 360 DMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDV 419
Query: 426 IWRSIITACHARGELKLGESI 446
+ S+++AC G+ +LG I
Sbjct: 420 TFLSLLSACSHTGQTELGWKI 440
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
Query: 289 SVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMV 348
+++L + LID++ K GDV A LF ++ +VSWT++I + G +A+ LF EM
Sbjct: 46 NLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMH 105
Query: 349 EQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSME-GNFGIVPKIEHYGCMVDLLSRAGF 407
+ V+ + ++ VL +C + +G S+E GN + ++ L +R G
Sbjct: 106 REDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGN--CAGNLIVRSALLSLYARCGK 163
Query: 408 VKEALDFVRTMPVEPNQIIWRSII 431
++EA +M E + + W ++I
Sbjct: 164 MEEARLQFDSMK-ERDLVSWNAMI 186
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 166/294 (56%), Gaps = 3/294 (1%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM--QVMGVCPDEITMVSVLTAC 265
A ++F K D + + AMI Y + G A+ LF +M + + PDEIT+ SV++A
Sbjct: 282 AEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSAN 341
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
+ LG G W+ESYI I L +LID++ K GD KA +F ++ VS++
Sbjct: 342 SQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYS 401
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
++I+G ++G +EA SLF M+E+ + P+ V+F G+LSA HS LV +G FNSM+ +
Sbjct: 402 AMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMK-D 460
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGES 445
+ P +HYG MVD+L RAG ++EA + +++MP++PN +W +++ A ++ GE
Sbjct: 461 HNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEI 520
Query: 446 ISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIE 499
++ E L+ IY+ + RW+ VR+ + + + K G + +E
Sbjct: 521 ACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 120/282 (42%), Gaps = 31/282 (10%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D+F + L+R + + K + + +Y M G+ P+ VL+AC + ++ GK +
Sbjct: 68 DSFSWGCLVRFLSQHRKFKET-VDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPI 126
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXX--------------------XXXXX 205
H +K G ++VQ ++ +Y
Sbjct: 127 HAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGEL 186
Query: 206 XLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTAC 265
A +VFD+ P+ D+V+W+ +I YA++G A LF M + I ++ C
Sbjct: 187 DEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNI-LIGGYVNC 245
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWT 325
++ K +Y + V +I + K GDV A LFR M + +
Sbjct: 246 REM------KLARTYFDAMPQKNGVSWI-TMISGYTKLGDVQSAEELFRLMSKKDKLVYD 298
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQG--VEPDDVSFIGVLSA 365
++I +G+ +A+ LF +M+E+ ++PD+++ V+SA
Sbjct: 299 AMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSA 340
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 100/233 (42%), Gaps = 15/233 (6%)
Query: 219 DSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLE 278
DS +W ++ ++ V ++ +M G+ P + SVL AC + + GK +
Sbjct: 68 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIH 127
Query: 279 SYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGS 338
+ + V + L+ ++++ G ++ A F + VSW S++ G G
Sbjct: 128 AQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELD 187
Query: 339 EAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCM 398
EA +FD++ E+ D VS+ ++S+ + S F++M + + +
Sbjct: 188 EARRVFDKIPEK----DAVSWNLIISSYAKKGDMGNACSLFSAMP-----LKSPASWNIL 238
Query: 399 VDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELL 451
+ +K A + MP + N + W ++I+ G KLG+ S E L
Sbjct: 239 IGGYVNCREMKLARTYFDAMP-QKNGVSWITMIS-----GYTKLGDVQSAEEL 285
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 210/441 (47%), Gaps = 23/441 (5%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +NTLI +A + + L++ +M G+ ++ ++ VL + L L++GK V
Sbjct: 224 DTISWNTLIAGYAQNGYEEEA-LKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEV 282
Query: 166 HGSVVKFGFDDDLHVQNTMIHMY--------------------XXXXXXXXXXXXXXXXX 205
H V+K G + V + ++ +Y
Sbjct: 283 HARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKM 342
Query: 206 XLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGV-CPDEITMVSVLTA 264
A ++FD + + V W+AM GY + L R PD + MVSVL A
Sbjct: 343 VEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGA 402
Query: 265 CADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSW 324
C+ +E GK + + I +L A +DM++KCG+V+ A +F V +
Sbjct: 403 CSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMY 462
Query: 325 TSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEG 384
++I G A HG +++ F++M E G +PD+++F+ +LSAC H LV +G YF SM
Sbjct: 463 NAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIE 522
Query: 385 NFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTM-PVEPNQIIWRSIITACHARGELKLG 443
+ I P+ HY CM+DL +A + +A++ + + VE + +I + + AC +L
Sbjct: 523 AYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELV 582
Query: 444 ESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNE 503
+ + ++LL E ++ S Y+ ++N YA RW++ ++R M + ++ G + ++ +
Sbjct: 583 KEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQ 642
Query: 504 MCEFVAGDKSHDQYKQIYEMV 524
F + D SH + + IY M+
Sbjct: 643 FHMFTSSDISHYETEAIYAML 663
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/473 (20%), Positives = 187/473 (39%), Gaps = 93/473 (19%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRY---GVVPNKFTYPFVLKACAGLSDLRLG 162
D +NTL+ FA T +S ++++ M R + + FT ++K A L+++ G
Sbjct: 85 DLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYG 144
Query: 163 KAVHGSVVKFGFDDDLHVQNTMIHMYXX----------------------XXXXXXXXXX 200
+ +HG +VK G D +++IHMY
Sbjct: 145 EQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYC 204
Query: 201 XXXXXXLAGKVFDESPK-TDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMV 259
A VF +P+ D+++W+ +I GYA+ G+ A+ + M+ G+ DE +
Sbjct: 205 REGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFG 264
Query: 260 SVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSC 319
+VL + L +L++GK + + + + + + ++D++ KCG++ A +
Sbjct: 265 AVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFG 324
Query: 320 TIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGV--------------------------- 352
+ S +S+IVG + G+ EA LFD + E+ +
Sbjct: 325 NLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFI 384
Query: 353 -----EPDDVSFIGVLSACCHSKLVDKGR------------------SYFNSMEGNFGIV 389
PD + + VL AC ++ G+ + F M G V
Sbjct: 385 ANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNV 444
Query: 390 PKIEH------------YGCMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRSIITAC 434
E Y M+ + G ++ M +P++I + ++++AC
Sbjct: 445 EYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSAC 504
Query: 435 HARGELKLGESISKELLR--NEPTHESNYVLLSNIYAKLRRWEQKTKVREMMD 485
RG + GE K ++ N +Y + ++Y K R ++ ++ E +D
Sbjct: 505 RHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGID 557
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 185/384 (48%), Gaps = 28/384 (7%)
Query: 141 PNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYX----------- 189
PN T+ + ACA L +L+ G+ +HG V+K F + V +I MY
Sbjct: 229 PNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIV 288
Query: 190 --------------XXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGH 235
L K+ E K DS TW+++I G+++ G
Sbjct: 289 FTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGK 348
Query: 236 SSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNA 295
A F M + + P + S+L+AC+D+ L+ GK + ++ + + + +
Sbjct: 349 VIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTS 408
Query: 296 LIDMFAKCGDVDKAMNLFRQMDSCT--IVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVE 353
LIDM+ KCG A +F + + V W +I G HG A+ +F+ + E+ VE
Sbjct: 409 LIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVE 468
Query: 354 PDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALD 413
P +F VLSAC H V+KG F M+ +G P EH GCM+DLL R+G ++EA +
Sbjct: 469 PSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKE 528
Query: 414 FVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRR 473
+ M + + S++ +C + LGE + +L EP + + +V+LS+IYA L R
Sbjct: 529 VIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALER 587
Query: 474 WEQKTKVREMMDMRGMKKVPGSTM 497
WE +R+++D + + K+PG ++
Sbjct: 588 WEDVESIRQVIDQKQLVKLPGLSL 611
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 145/323 (44%), Gaps = 32/323 (9%)
Query: 141 PNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXX 200
PNKFT+P +LK+CA L D+ G+ +H VVK GF D+ ++ MY
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTD---- 84
Query: 201 XXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVS 260
A KV DE P+ + +A + G G A +F + +V G + +T+ S
Sbjct: 85 -------ALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVAS 137
Query: 261 VLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCT 320
VL C D +E G L V + +L+ M+++CG+ A +F ++ +
Sbjct: 138 VLGGCGD---IEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKS 194
Query: 321 IVSWTSVIVGLAMHGRGSEAVSLFDEMVE-QGVEPDDVSFIGVLSACCHSKLVDKGRSYF 379
+V++ + I GL +G + S+F+ M + EP+DV+F+ ++AC + GR
Sbjct: 195 VVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQL- 253
Query: 380 NSMEGNFGIVPKIEHY------GCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITA 433
G+V K E ++D+ S+ K A + N I W S+I+
Sbjct: 254 ------HGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISG 307
Query: 434 CHARGE----LKLGESISKELLR 452
G+ ++L E + E L+
Sbjct: 308 MMINGQHETAVELFEKLDSEGLK 330
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 130/264 (49%), Gaps = 20/264 (7%)
Query: 142 NKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXX 201
N T VL C D+ G +H +K GF+ +++V +++ MY
Sbjct: 131 NSVTVASVLGGCG---DIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWV------ 181
Query: 202 XXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVC-PDEITMVS 260
LA ++F++ P VT++A I G G + +F M+ P+++T V+
Sbjct: 182 -----LAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVN 236
Query: 261 VLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM-DSC 319
+TACA L L+ G+ L + K+ + ALIDM++KC A +F ++ D+
Sbjct: 237 AITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTR 296
Query: 320 TIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYF 379
++SW SVI G+ ++G+ AV LF+++ +G++PD ++ ++S V + +F
Sbjct: 297 NLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFF 356
Query: 380 NSMEGNFGIVPKIEHYGCMVDLLS 403
M + +VP ++ C+ LLS
Sbjct: 357 ERML-SVVMVPSLK---CLTSLLS 376
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 17/215 (7%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D+ +N+LI F+ + + + + ML +VP+ +L AC+ + L+ GK +
Sbjct: 332 DSATWNSLISGFSQLGKVIEA-FKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEI 390
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFD--ESPKTDSVTW 223
HG V+K + D+ V ++I MY A ++FD E D V W
Sbjct: 391 HGHVIKAAAERDIFVLTSLIDMY-----------MKCGLSSWARRIFDRFEPKPKDPVFW 439
Query: 224 SAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYI-- 281
+ MI GY + G A+ +F ++ V P T +VL+AC+ G +E G + +
Sbjct: 440 NVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQE 499
Query: 282 EWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM 316
E+ P S E +ID+ + G + +A + QM
Sbjct: 500 EYGYKP-STEHIGCMIDLLGRSGRLREAKEVIDQM 533
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 163/312 (52%), Gaps = 11/312 (3%)
Query: 142 NKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXX 201
+ T ++L C+G+SD+++GK HG + + G+D ++ V N ++ MY
Sbjct: 394 DNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWF 453
Query: 202 XXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSV 261
L D V+W+A++ G AR G S +A+ F MQV P + T+ ++
Sbjct: 454 RQMSEL----------RDEVSWNALLTGVARVGRSEQALSFFEGMQVEAK-PSKYTLATL 502
Query: 262 LTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTI 321
L CA++ AL LGK + ++ V + A++DM++KC D A+ +F++ + +
Sbjct: 503 LAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDL 562
Query: 322 VSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNS 381
+ W S+I G +GR E LF + +GV+PD V+F+G+L AC V+ G YF+S
Sbjct: 563 ILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSS 622
Query: 382 MEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELK 441
M + I P++EHY CM++L + G + + +F+ MP +P + I AC K
Sbjct: 623 MSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSK 682
Query: 442 LGESISKELLRN 453
LG +K L+ +
Sbjct: 683 LGAWAAKRLMND 694
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 134/277 (48%), Gaps = 16/277 (5%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +N +I A A S +++R M R GV + ++ VLK+C + DLRL + +
Sbjct: 126 DGGSWNAVITACAQNGVSDEV-FRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQL 184
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H +VVK+G+ ++ ++ +++ +Y A +VFDE V+W+
Sbjct: 185 HCAVVKYGYSGNVDLETSIVDVYGKCRVMSD-----------ARRVFDEIVNPSDVSWNV 233
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
++ Y G + AV +F +M + V P T+ SV+ AC+ ALE+GK + +
Sbjct: 234 IVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLS 293
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFD 345
+ + ++ DM+ KC ++ A +F Q S + SWTS + G AM G EA LFD
Sbjct: 294 VVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFD 353
Query: 346 EMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM 382
M E+ + VS+ +L H+ D+ + M
Sbjct: 354 LMPERNI----VSWNAMLGGYVHAHEWDEALDFLTLM 386
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 162/390 (41%), Gaps = 38/390 (9%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+N ++R + + + + ++ ML V P T V+ AC+ L +GK +H
Sbjct: 231 WNVIVRRYLEMGFNDEAVVMFFK-MLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIA 289
Query: 170 VKFGFDDDLHVQNTMIHMYXX--------------------XXXXXXXXXXXXXXXXLAG 209
VK D V ++ MY A
Sbjct: 290 VKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREAR 349
Query: 210 KVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLG 269
++FD P+ + V+W+AM+GGY A+ M+ D +T+V +L C+ +
Sbjct: 350 ELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGIS 409
Query: 270 ALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTI-VSWTSVI 328
+++GK +I +V + NAL+DM+ KCG + A FRQM VSW +++
Sbjct: 410 DVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALL 469
Query: 329 VGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGI 388
G+A GR +A+S F+ M + +P + +L+ C + ++ G++ + + G
Sbjct: 470 TGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRD-GY 527
Query: 389 VPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISK 448
+ G MVD+ S+ A++ + + I+W SII C G SK
Sbjct: 528 KIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSIIRGCCRNGR-------SK 579
Query: 449 E------LLRNEPTHESNYVLLSNIYAKLR 472
E LL NE + L + A +R
Sbjct: 580 EVFELFMLLENEGVKPDHVTFLGILQACIR 609
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +N L+ A +S+ + L + M + P+K+T +L CA + L LGKA+
Sbjct: 461 DEVSWNALLTGVARVGRSEQA-LSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLGKAI 518
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
HG +++ G+ D+ ++ M+ MY A +VF E+ D + W++
Sbjct: 519 HGFLIRDGYKIDVVIRGAMVDMY-----------SKCRCFDYAIEVFKEAATRDLILWNS 567
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELG-KWLESYIEWK 284
+I G R G S LF ++ GV PD +T + +L AC G +ELG ++ S
Sbjct: 568 IIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKY 627
Query: 285 KIPKSVELCNALIDMFAKCG 304
I VE + +I+++ K G
Sbjct: 628 HISPQVEHYDCMIELYCKYG 647
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 85/169 (50%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A ++F+E P+ D +W+A+I A+ G S +FR M GV E + VL +C
Sbjct: 115 ARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGL 174
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSV 327
+ L L + L + +V+L +++D++ KC + A +F ++ + + VSW +
Sbjct: 175 ILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVI 234
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGR 376
+ G EAV +F +M+E V P + + V+ AC S ++ G+
Sbjct: 235 VRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGK 283
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 37/75 (49%)
Query: 292 LCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQG 351
L N I+ + KCG VD A LF +M SW +VI A +G E +F M G
Sbjct: 98 LLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDG 157
Query: 352 VEPDDVSFIGVLSAC 366
V + SF GVL +C
Sbjct: 158 VRATETSFAGVLKSC 172
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 179 bits (453), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 194/366 (53%), Gaps = 21/366 (5%)
Query: 265 CADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSW 324
C ++ ALE + + I P + +I+M++ C D A+N+F +M +W
Sbjct: 122 CGEVEALEEARVVHDCI----TPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETW 177
Query: 325 TSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEG 384
++I LA +G G A+ +F +E+G +PD F V AC +++G +F SM
Sbjct: 178 GTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYR 237
Query: 385 NFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGE 444
++G+V +E Y ++++L+ G + EALDFV M VEP+ +W +++ C +G L+LG+
Sbjct: 238 DYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGD 297
Query: 445 SIS---KELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELN 501
+ K+L + + ESN L++ + K++E+ + ++ P
Sbjct: 298 RFAELIKKLDASRMSKESNAGLVAAKASD----SAMEKLKELRYCQMIRDDP-------K 346
Query: 502 NEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYKHSE 561
M EF AGD SH + + +I G+VP T + ++EE+KE+ L S
Sbjct: 347 KRMHEFRAGDTSHLGTVSAFRSLKVQMLDI---GFVPATRVCFVTVEEEEKEEQLLFRSN 403
Query: 562 KLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLC 621
KLA A A++N+ P+ +++N+R C D H+ K IS + R ++ RD+ ++H +KNG+C
Sbjct: 404 KLAFAHAIINSEARRPLTVLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGVC 463
Query: 622 SCGDFW 627
SC D+W
Sbjct: 464 SCKDYW 469
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 69/167 (41%), Gaps = 16/167 (9%)
Query: 151 KACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGK 210
K C + L + VH + D +T+I MY A
Sbjct: 120 KLCGEVEALEEARVVHDCITPL----DARSYHTVIEMYSGCRSTDD-----------ALN 164
Query: 211 VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGA 270
VF+E PK +S TW MI A+ G RA+ +F G PD+ +V AC +G
Sbjct: 165 VFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGD 224
Query: 271 LELGKW-LESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM 316
+ G ES + S+E +I+M A CG +D+A++ +M
Sbjct: 225 INEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERM 271
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 177/352 (50%), Gaps = 29/352 (8%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+N L+ +A+ + L L+ ML+ G P ++T+ LK+C +++L + +H +
Sbjct: 385 WNALLSGYAN--KDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC-VTEL---QQLHSVI 438
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXX---------XXXXXXXXLAG----------- 209
V+ G++D+ +V ++++ Y +AG
Sbjct: 439 VRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHES 498
Query: 210 -KVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADL 268
K+ + D+V+W+ I +R + + LF+ M + PD+ T VS+L+ C+ L
Sbjct: 499 VKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKL 558
Query: 269 GALELGKWLESYIEWKKIP-KSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSV 327
L LG + I +CN LIDM+ KCG + M +F + +++WT++
Sbjct: 559 CDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTAL 618
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG 387
I L +HG G EA+ F E + G +PD VSFI +L+AC H +V +G F M+ ++G
Sbjct: 619 ISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMK-DYG 677
Query: 388 IVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGE 439
+ P+++HY C VDLL+R G++KEA +R MP + +WR+ + C+ E
Sbjct: 678 VEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRFAE 729
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 149/336 (44%), Gaps = 48/336 (14%)
Query: 130 LYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYX 189
+R ++R G + ++ VLK + + DL + K +H S K G D ++ V N++I Y
Sbjct: 202 FFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYG 261
Query: 190 XXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVM 249
+A ++F ++ D V+W+A+I A+ + +A+ LF M
Sbjct: 262 KCGNTH-----------MAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEH 310
Query: 250 GVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKA 309
G P++ T VSVL + + L G+ + + + L NALID +AKCG+++ +
Sbjct: 311 GFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDS 370
Query: 310 MNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACC-- 367
F + IV W +++ G A + G +SLF +M++ G P + +F L +CC
Sbjct: 371 RLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVT 429
Query: 368 -----HSKLVDKG------------RSY------------FNSMEGNFGIVPKIEHYGCM 398
HS +V G RSY + G +VP +
Sbjct: 430 ELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVP----LNIV 485
Query: 399 VDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITAC 434
+ SR G E++ + T+ +P+ + W I AC
Sbjct: 486 AGIYSRRGQYHESVKLISTLE-QPDTVSWNIAIAAC 520
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 152/329 (46%), Gaps = 25/329 (7%)
Query: 110 FNTLIRAFA-HTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGS 168
FNT+I+ ++ + K+ G+ + M +G +PN+ T +L +CA L D+R G +HG
Sbjct: 83 FNTIIKGYSKYGDVDKAWGV--FSEMRYFGYLPNQSTVSGLL-SCASL-DVRAGTQLHGL 138
Query: 169 VVKFG-FDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMI 227
+K+G F D V ++ +Y +A +VF++ P TW+ M+
Sbjct: 139 SLKYGLFMADAFVGTCLLCLYGRLDLLE-----------MAEQVFEDMPFKSLETWNHMM 187
Query: 228 GGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIP 287
RG + FRE+ MG E + + VL + + L++ K L K +
Sbjct: 188 SLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLD 247
Query: 288 KSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEM 347
+ + N+LI + KCG+ A +F+ S IVSW ++I A +A+ LF M
Sbjct: 248 CEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSM 307
Query: 348 VEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGF 407
E G P+ +++ VL +L+ GR + N G I ++D ++ G
Sbjct: 308 PEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKN-GCETGIVLGNALIDFYAKCGN 366
Query: 408 VKEA---LDFVRTMPVEPNQIIWRSIITA 433
++++ D++R + N + W ++++
Sbjct: 367 LEDSRLCFDYIR----DKNIVCWNALLSG 391
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 1/157 (0%)
Query: 207 LAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACA 266
LAGKVFD+ P+ + V+++ +I GY++ G +A G+F EM+ G P++ T VS L +CA
Sbjct: 67 LAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQST-VSGLLSCA 125
Query: 267 DLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTS 326
L + +++ + L+ ++ + ++ A +F M ++ +W
Sbjct: 126 SLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNH 185
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVL 363
++ L G E + F E+V G + SF+GVL
Sbjct: 186 MMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVL 222
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 5/166 (3%)
Query: 288 KSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEM 347
+ V +CN +I ++ K G+V A +F QM VS+ ++I G + +G +A +F EM
Sbjct: 47 QPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEM 106
Query: 348 VEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYG-CMVDLLSRAG 406
G P+ + G+LS C S V G + + + +G+ G C++ L R
Sbjct: 107 RYFGYLPNQSTVSGLLS--CASLDVRAG-TQLHGLSLKYGLFMADAFVGTCLLCLYGRLD 163
Query: 407 FVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLR 452
++ A MP + + W +++ RG LK +EL+R
Sbjct: 164 LLEMAEQVFEDMPFKSLE-TWNHMMSLLGHRGFLKECMFFFRELVR 208
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 194/395 (49%), Gaps = 16/395 (4%)
Query: 233 RGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVEL 292
+G+ AV + ++ G D I ++ + C ALE + + I P V
Sbjct: 97 QGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGA 156
Query: 293 CNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGV 352
NA+I+M++ C VD A+ +F +M + ++ +G G EA+ LF E+G
Sbjct: 157 RNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGN 216
Query: 353 EPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEAL 412
+P+ F V S C + V +G F +M +GIVP +EHY + +L+ +G + EAL
Sbjct: 217 KPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEAL 276
Query: 413 DFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLR 472
+FV MP+EP+ +W +++ G+++LG+ + EL+ + V + + A
Sbjct: 277 NFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCA-ELVEKLDATRLDKVSSAGLVA--- 332
Query: 473 RWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIK 532
TK + + KK P ST E F D SH Q IYE + + ++K
Sbjct: 333 -----TKASDFV-----KKEP-STRSE-PYFYSTFRPVDSSHPQMNIIYETLMSLRSQLK 380
Query: 533 RAGYVPTTSQVLLDIDEEDKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHS 592
GYVP T I + ++ ++ + E++A+ +LL + P + I ++ N+R+ DCH
Sbjct: 381 EMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRIVGDCHD 440
Query: 593 ATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 627
K +S + R+++ RD +H FKNG+C C + W
Sbjct: 441 MMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 24/223 (10%)
Query: 151 KACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGK 210
K C L + VH ++ D+ +N +I MY A K
Sbjct: 127 KLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDD-----------ALK 175
Query: 211 VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGA 270
VF+E P+ +S T M+ + G+ A+ LF + G P+ V + C G
Sbjct: 176 VFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGD 235
Query: 271 LELG--KWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD-SCTIVSWTSV 327
++ G ++ Y E+ +P S+E +++ M A G +D+A+N +M ++ W ++
Sbjct: 236 VKEGSLQFQAMYREYGIVP-SMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETL 294
Query: 328 IVGLAMHGRGSEAVSLFD---EMVEQ--GVEPDDVSFIGVLSA 365
+ +HG V L D E+VE+ D VS G+++
Sbjct: 295 MNLSRVHG----DVELGDRCAELVEKLDATRLDKVSSAGLVAT 333
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 164/305 (53%), Gaps = 13/305 (4%)
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIH 186
+ ++ ML + +PN+FT +LKAC+ LR G+ VH VVK D+ V +++
Sbjct: 268 AIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMD 327
Query: 187 MYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM 246
MY KVFD ++VTW+++I +AR G A+ LFR M
Sbjct: 328 MYAKCGEISD-----------CRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIM 376
Query: 247 QVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDV 306
+ + + +T+VS+L AC +GAL LGK L + I I K+V + + L+ ++ KCG+
Sbjct: 377 KRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGES 436
Query: 307 DKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSAC 366
A N+ +Q+ S +VSWT++I G + G SEA+ EM+++GVEP+ ++ L AC
Sbjct: 437 RDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKAC 496
Query: 367 CHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQII 426
+S+ + GRS + + N + + ++ + ++ GFV EA +MP E N +
Sbjct: 497 ANSESLLIGRSIHSIAKKNHAL-SNVFVGSALIHMYAKCGFVSEAFRVFDSMP-EKNLVS 554
Query: 427 WRSII 431
W+++I
Sbjct: 555 WKAMI 559
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 176/376 (46%), Gaps = 54/376 (14%)
Query: 127 GLQLYRTMLRYGV-VPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMI 185
L+ +++G+ N+ + +L C+ ++ LG+ VHG++VK G + L V+++++
Sbjct: 167 AFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGN-LIVESSLV 225
Query: 186 HMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFRE 245
+ Y A + FD + D ++W+A+I +R+GH +A+G+F
Sbjct: 226 YFYAQCGELTS-----------ALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIG 274
Query: 246 MQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGD 305
M P+E T+ S+L AC++ AL G+ + S + + I V + +L+DM+AKCG+
Sbjct: 275 MLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGE 334
Query: 306 VDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSA 365
+ +F M + V+WTS+I A G G EA+SLF M + + ++++ + +L A
Sbjct: 335 ISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRA 394
Query: 366 CCHSKLVDKGRSYF-----NSMEGN--------------------FGIVPK-----IEHY 395
C + G+ NS+E N F ++ + + +
Sbjct: 395 CGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSW 454
Query: 396 GCMVDLLSRAGFVKEALDFVRTM---PVEPNQIIWRSIITACHARGELKLGESISKELLR 452
M+ S G EALDF++ M VEPN + S + AC L +G SI +
Sbjct: 455 TAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKK 514
Query: 453 NEPTHESNYVLLSNIY 468
N LSN++
Sbjct: 515 NHA--------LSNVF 522
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 123/240 (51%), Gaps = 11/240 (4%)
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIH 186
+ L+R M R ++ N T +L+AC + L LGK +H ++K + ++++ +T++
Sbjct: 369 AISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVW 428
Query: 187 MYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM 246
+Y A V + P D V+W+AMI G + GH S A+ +EM
Sbjct: 429 LYCKCGESRD-----------AFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEM 477
Query: 247 QVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDV 306
GV P+ T S L ACA+ +L +G+ + S + +V + +ALI M+AKCG V
Sbjct: 478 IQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFV 537
Query: 307 DKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSAC 366
+A +F M +VSW ++I+G A +G EA+ L M +G E DD F +LS C
Sbjct: 538 SEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 127/280 (45%), Gaps = 35/280 (12%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGV-CPDEITMVSVLTACA 266
A KVFD P+ ++VTW+AMI GY + G A LF + G+ +E V +L C+
Sbjct: 136 ARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCS 195
Query: 267 DLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTS 326
ELG+ + + + + + ++L+ +A+CG++ A+ F M+ ++SWT+
Sbjct: 196 RRAEFELGRQVHGNMVKVGVGNLI-VESSLVYFYAQCGELTSALRAFDMMEEKDVISWTA 254
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFN------ 380
VI + G G +A+ +F M+ P++ + +L AC K + GR +
Sbjct: 255 VISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRM 314
Query: 381 ---------SMEGNFGIVPKIEHYGCMVDLLS---------------RAGFVKEALDFVR 416
S+ + +I + D +S R GF +EA+ R
Sbjct: 315 IKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFR 374
Query: 417 TMP---VEPNQIIWRSIITACHARGELKLGESISKELLRN 453
M + N + SI+ AC + G L LG+ + ++++N
Sbjct: 375 IMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKN 414
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 124 KSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNT 183
+S L + M++ GV PN FTY LKACA L +G+++H K ++ V +
Sbjct: 467 ESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSA 526
Query: 184 MIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLF 243
+IHMY A +VFD P+ + V+W AMI GYAR G A+ L
Sbjct: 527 LIHMYAKCGFVSE-----------AFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLM 575
Query: 244 REMQVMGVCPDEITMVSVLTACADLGALELGKWLES 279
M+ G D+ ++L+ C D +EL + +ES
Sbjct: 576 YRMEAEGFEVDDYIFATILSTCGD---IELDEAVES 608
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 95/137 (69%), Gaps = 3/137 (2%)
Query: 493 PGSTMIELNNEMCEFVAGDKSH--DQYKQIYEMVDEMGREIKRAGYVPTTSQVLLDIDEE 550
P S ++ + E G+K D+ K Y + +G+E++ AGYVP T VL DIDEE
Sbjct: 104 PSSHSTKVRGDKPEISGGEKKAIVDRSKA-YVKLKSLGKEVRDAGYVPETKYVLHDIDEE 162
Query: 551 DKEDALYKHSEKLAIAFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDR 610
KE AL HSE+LAIAF ++NTPPGT IR++KNLR+C DCH+ K +S + +REI+VRD
Sbjct: 163 AKEKALMHHSERLAIAFGIINTPPGTTIRVMKNLRICGDCHNFIKILSSIEDREIIVRDN 222
Query: 611 NRFHHFKNGLCSCGDFW 627
RFHHF++G CSCGD+W
Sbjct: 223 KRFHHFRDGNCSCGDYW 239
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 193/404 (47%), Gaps = 23/404 (5%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +N+++ A S L L+ M +G P+ + L C+ SD++ GK +
Sbjct: 279 DVISWNSIVSVCADYGSVLDS-LDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQI 337
Query: 166 HGSVVKFGFD-DDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWS 224
H V+K GFD LHVQ+ +I MY + ++ P + +
Sbjct: 338 HCYVLKMGFDVSSLHVQSALIDMYGKCNGIEN-----------SALLYQSLPCLNLECCN 386
Query: 225 AMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLES--YIE 282
+++ G + + +F M G DE+T+ +VL A + L L + L S +
Sbjct: 387 SLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALS----LSLPESLHSCTLVH 442
Query: 283 WKKIPKS----VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGS 338
I V + +LID + K G + + +F ++D+ I TS+I G A +G G+
Sbjct: 443 CCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGT 502
Query: 339 EAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCM 398
+ V + EM + PD+V+ + VLS C HS LV++G F+S+E +GI P + Y CM
Sbjct: 503 DCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACM 562
Query: 399 VDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHE 458
VDLL RAG V++A + + + + W S++ +C +G ++ L+ EP +
Sbjct: 563 VDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENF 622
Query: 459 SNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNN 502
+ Y+ +S Y ++ +E ++RE+ R + + G + + + N
Sbjct: 623 AVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSVVVKN 666
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 163/384 (42%), Gaps = 63/384 (16%)
Query: 111 NTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVV 170
N L+R F T +SK ++Y M GV N TY ++++ C+ + GK +H VV
Sbjct: 182 NLLLRCFCQTGESKRL-FEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVV 240
Query: 171 KFGFD-DDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKV--FDESPKTDSVTWSAMI 227
K G++ ++ V N ++ Y L+G + F+ P+ D ++W++++
Sbjct: 241 KSGWNISNIFVANVLVDYYSACGD-------------LSGSMRSFNAVPEKDVISWNSIV 287
Query: 228 GGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIP 287
A G ++ LF +MQ G P +S L C+ ++ GK + Y+
Sbjct: 288 SVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFD 347
Query: 288 -KSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDE 346
S+ + +ALIDM+ KC ++ + L++ + + S++ L G + + +F
Sbjct: 348 VSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGL 407
Query: 347 MVEQGVEPDDVSFIGVLSA----------------CCHSK------------LVDK---- 374
M+++G D+V+ VL A CC K L+D
Sbjct: 408 MIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKS 467
Query: 375 -----GRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP---VEPNQII 426
R F+ ++ P I +++ +R G + + +R M + P+++
Sbjct: 468 GQNEVSRKVFDELD-----TPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVT 522
Query: 427 WRSIITACHARGELKLGESISKEL 450
S+++ C G ++ GE I L
Sbjct: 523 ILSVLSGCSHSGLVEEGELIFDSL 546
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 123/274 (44%), Gaps = 17/274 (6%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +N LI + S + ++LY M+ G+ + T+P VL C+ R G V
Sbjct: 76 DVVTYNLLISGNSRYGCSLRA-IELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQV 134
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H V+ GF ++ V++ ++ +Y +A K+FDE + +
Sbjct: 135 HCRVISLGFGCNMFVRSALVGLYACLRLVD-----------VALKLFDEMLDRNLAVCNL 183
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYI---E 282
++ + + G S R ++ M++ GV + +T ++ C+ + GK L S +
Sbjct: 184 LLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSG 243
Query: 283 WKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVS 342
W ++ + N L+D ++ CGD+ +M F + ++SW S++ A +G +++
Sbjct: 244 WN--ISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLD 301
Query: 343 LFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGR 376
LF +M G P F+ L+ C + + G+
Sbjct: 302 LFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGK 335
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 120/277 (43%), Gaps = 22/277 (7%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A + FDE D VT++ +I G +R G S RA+ L+ EM G+ T SVL+ C+D
Sbjct: 65 AHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSD 124
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSV 327
G + + ++ + +AL+ ++A VD A+ LF +M + +
Sbjct: 125 ELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLL 184
Query: 328 IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG 387
+ G ++ M +GV + +++ ++ C H +LV +G+ + + +
Sbjct: 185 LRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGW 244
Query: 388 IVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESIS 447
+ I +VD S G + ++ +P E + I W SI++ C G S+
Sbjct: 245 NISNIFVANVLVDYYSACGDLSGSMRSFNAVP-EKDVISWNSIVSVCADYG------SVL 297
Query: 448 KELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMM 484
L ++++K++ W ++ +R M
Sbjct: 298 DSL---------------DLFSKMQFWGKRPSIRPFM 319
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 161/326 (49%), Gaps = 51/326 (15%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSD----------- 158
+N ++ +A ++ + L+L+ MLR GV PN+ T+ V+ AC+ +D
Sbjct: 232 WNAMLSGYAQNGFTEDA-LRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLI 290
Query: 159 ----LRLGKAVHGSVV-----------------KFGFDDDLHVQNTMIHMYXXXXXXXXX 197
+RL V +++ + G +L N MI Y
Sbjct: 291 DEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSS- 349
Query: 198 XXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVC-PDEI 256
A ++FD PK + V+W+++I GYA G ++ A+ F +M G PDE+
Sbjct: 350 ----------ARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEV 399
Query: 257 TMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM 316
TM+SVL+AC + LELG + YI +I + +LI M+A+ G++ +A +F +M
Sbjct: 400 TMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEM 459
Query: 317 DSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGR 376
+VS+ ++ A +G G E ++L +M ++G+EPD V++ VL+AC + L+ +G+
Sbjct: 460 KERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQ 519
Query: 377 SYFNSMEGNFGIVPKIEHYGCMVDLL 402
F S+ P +HY CM DLL
Sbjct: 520 RIFKSIRN-----PLADHYACM-DLL 539
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 142/309 (45%), Gaps = 66/309 (21%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACAD 267
A K FD P+ V+W+AM+ GYA+ G + A+ LF +M +GV P+E T V V++AC+
Sbjct: 217 ARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSF 276
Query: 268 LGALELGKWLESYIEWKKIPKSVELCNALIDMFAKC------------------------ 303
L + L I+ K++ + + AL+DM AKC
Sbjct: 277 RADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNA 336
Query: 304 --------GDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQG-VEP 354
GD+ A LF M +VSW S+I G A +G+ + A+ F++M++ G +P
Sbjct: 337 MISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKP 396
Query: 355 DDVSFIGVLSACCHS------------------KLVDKG-RS--YFNSMEGNFGIVPK-- 391
D+V+ I VLSAC H KL D G RS + + GN +
Sbjct: 397 DEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVF 456
Query: 392 -------IEHYGCMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRSIITACHARGELK 441
+ Y + + G E L+ + M +EP+++ + S++TAC+ G LK
Sbjct: 457 DEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLK 516
Query: 442 LGESISKEL 450
G+ I K +
Sbjct: 517 EGQRIFKSI 525
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/533 (21%), Positives = 198/533 (37%), Gaps = 141/533 (26%)
Query: 72 TKFAATSSTFNAIHYATSFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLY 131
++ + + A Y T +F D T P + F+ N++ + F+ + L+LY
Sbjct: 43 SRIISCCTRLRAPSYYTRLIF--DSVTFP-----NVFVVNSMFKYFSKMDMANDV-LRLY 94
Query: 132 RTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXX 191
R G++P+ F++P V+K+ R G V K GF D +V+N ++ MY
Sbjct: 95 EQRSRCGIMPDAFSFPVVIKSAG-----RFGILFQALVEKLGFFKDPYVRNVIMDMYVKH 149
Query: 192 XXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGV 251
A KVFD+ + W+ MI GY + G+ A LF M
Sbjct: 150 ESVES-----------ARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMM----- 193
Query: 252 CPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMN 311
P+ + W +I FAK D++ A
Sbjct: 194 -PE-----------------------NDVVSW----------TVMITGFAKVKDLENARK 219
Query: 312 LFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHS-- 369
F +M ++VSW +++ G A +G +A+ LF++M+ GV P++ +++ V+SAC
Sbjct: 220 YFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRAD 279
Query: 370 --------KLVDKGRSYFN---------------------SMEGNFGIVPKIEHYGCMVD 400
KL+D+ R N + G + + M+
Sbjct: 280 PSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMIS 339
Query: 401 LLSRAGFVKEALDFVRTMP-----------------------------------VEPNQI 425
+R G + A TMP +P+++
Sbjct: 340 GYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEV 399
Query: 426 IWRSIITACHARGELKLGESISKELLRNE-PTHESNYVLLSNIYAK-LRRWEQKTKVREM 483
S+++AC +L+LG+ I + +N+ ++S Y L +YA+ WE K EM
Sbjct: 400 TMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEM 459
Query: 484 MDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGY 536
+ ++ N F A + + +M DE G E R Y
Sbjct: 460 KE---------RDVVSYNTLFTAFAANGDGVETLNLLSKMKDE-GIEPDRVTY 502
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 201/450 (44%), Gaps = 57/450 (12%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +N+L+ + + + + G+ L+ + R V PN+F++ L ACA L LG +
Sbjct: 120 DVISWNSLVSGYVQSGRFQE-GICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACI 178
Query: 166 HGSVVKFGFDD-DLHVQNTMIHMY--------------------XXXXXXXXXXXXXXXX 204
H +VK G + ++ V N +I MY
Sbjct: 179 HSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGK 238
Query: 205 XXLAGKVFDESPKTDSVT-------------------------------WSAMIGGYARR 233
L F + P D+VT W+ ++ GY
Sbjct: 239 LELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNS 298
Query: 234 GHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELC 293
S A F +M GV DE ++ VL A A L + G + + + V +
Sbjct: 299 EKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVA 358
Query: 294 NALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEM-VEQGV 352
+ALIDM++KCG + A +F M ++ W +I G A +G EA+ LF+++ E+ +
Sbjct: 359 SALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFL 418
Query: 353 EPDDVSFIGVLSACCHSKL-VDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEA 411
+PD +F+ +L+ C H ++ ++ YF M + I P +EH ++ + + G V +A
Sbjct: 419 KPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQA 478
Query: 412 LDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKEL--LRNEPTHESNYVLLSNIYA 469
++ + + WR+++ AC AR +LK ++++ ++ L + E Y+++SN+YA
Sbjct: 479 KQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYA 538
Query: 470 KLRRWEQKTKVREMMDMRGMKKVPGSTMIE 499
RW + ++R++M G+ K GS+ I+
Sbjct: 539 YHERWREVGQIRKIMRESGVLKEVGSSWID 568
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 124/301 (41%), Gaps = 53/301 (17%)
Query: 134 MLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXX 193
++ G P+ +L+ + L + +HG V K GF + + N+++ Y
Sbjct: 46 LINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDS 105
Query: 194 XXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCP 253
A KVFDE P D ++W++++ GY + G + LF E+ V P
Sbjct: 106 LED-----------AHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFP 154
Query: 254 DEITMVSVLTACADLGALELGKWLESYIEWKKIPK-SVELCNALIDMFAKCGDVDKAMNL 312
+E + + L ACA L LG + S + + K +V + N LIDM+ KCG +D A+ +
Sbjct: 155 NEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLV 214
Query: 313 FRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLV 372
F+ M+ VSW +++ + +G+ + F +M PD V+
Sbjct: 215 FQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM----PNPDTVT-------------- 256
Query: 373 DKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIIT 432
Y ++D ++G A + MP PN W +I+T
Sbjct: 257 ----------------------YNELIDAFVKSGDFNNAFQVLSDMP-NPNSSSWNTILT 293
Query: 433 A 433
Sbjct: 294 G 294
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 110/238 (46%), Gaps = 30/238 (12%)
Query: 220 SVTWSAMIGGYARRGHSSRAVGLFR---EMQVMGVCPDEITMVSVLTACADLGALELGKW 276
S +WS ++ AR G ++G+ R E+ G PD +V +L + G + L +
Sbjct: 21 SNSWSTIVPALARFG----SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQ 76
Query: 277 LESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGR 336
L Y+ + L N+L+ + ++ A +F +M ++SW S++ G GR
Sbjct: 77 LHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGR 136
Query: 337 GSEAVSLFDEMVEQGVEPDDVSFIGVLSACC-----------HSKLVDKGRSYFNSMEGN 385
E + LF E+ V P++ SF L+AC HSKLV G N + GN
Sbjct: 137 FQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGN 196
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLG 443
C++D+ + GF+ +A+ + M E + + W +I+ +C G+L+LG
Sbjct: 197 -----------CLIDMYGKCGFMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLELG 242
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 124/279 (44%), Gaps = 25/279 (8%)
Query: 91 LFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVL 150
+ SD P P +SS+ NT++ + ++ +S + + M GV ++++ VL
Sbjct: 276 VLSDMPN--PNSSSW-----NTILTGYVNSEKS-GEATEFFTKMHSSGVRFDEYSLSIVL 327
Query: 151 KACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGK 210
A A L+ + G +H K G D + V + +I MY A
Sbjct: 328 AAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKH-----------AEL 376
Query: 211 VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM-QVMGVCPDEITMVSVLTACADLG 269
+F P+ + + W+ MI GYAR G S A+ LF ++ Q + PD T +++L C+
Sbjct: 377 MFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCE 436
Query: 270 A---LELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD-SCTIVSWT 325
+ LG + E I +I SVE C +LI + G+V +A + ++ V+W
Sbjct: 437 VPMEVMLG-YFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWR 495
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLS 364
+++ + A ++ +M+E G D V+S
Sbjct: 496 ALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMS 534
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 139/279 (49%), Gaps = 13/279 (4%)
Query: 134 MLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXX 193
M + G P+ T VL CA L ++ GK +H +K F ++ + +++ MY
Sbjct: 409 MQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGV 468
Query: 194 XXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCP 253
++FD + + W+AMI Y + +FR M + P
Sbjct: 469 PEYPI-----------RLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRP 517
Query: 254 DEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNA-LIDMFAKCGDVDKAMNL 312
D +TM VLT C+DL AL+LGK L +I KK +S+ +A +I M+ KCGD+ A
Sbjct: 518 DSVTMGRVLTVCSDLKALKLGKELHGHI-LKKEFESIPFVSARIIKMYGKCGDLRSANFS 576
Query: 313 FRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLV 372
F + ++WT++I + +A++ F++MV +G P+ +F VLS C + V
Sbjct: 577 FDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFV 636
Query: 373 DKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEA 411
D+ +FN M + + P EHY +++LL+R G V+EA
Sbjct: 637 DEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 151/331 (45%), Gaps = 18/331 (5%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTML-RYGVVPNKFTYPFVLKACAGLSDLRLGKA 164
D ++ +I AH + + L L+RTM+ + PN +L + L+LGK
Sbjct: 279 DIVVWGAMIAGLAHN-KRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKE 337
Query: 165 VHGSVVKF-GFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTW 223
VH V+K + + V + +I +Y +VF S + ++++W
Sbjct: 338 VHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMAS-----------GRRVFYGSKQRNAISW 386
Query: 224 SAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEW 283
+A++ GYA G +A+ MQ G PD +T+ +VL CA+L A++ GK + Y
Sbjct: 387 TALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALK 446
Query: 284 KKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSL 343
+V L +L+ M++KCG + + LF +++ + +WT++I + + +
Sbjct: 447 NLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEV 506
Query: 344 FDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRS-YFNSMEGNFGIVPKIEHYGCMVDLL 402
F M+ PD V+ VL+ C K + G+ + + ++ F +P + ++ +
Sbjct: 507 FRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVS--ARIIKMY 564
Query: 403 SRAGFVKEALDFVRTMPVEPNQIIWRSIITA 433
+ G ++ A +F + W +II A
Sbjct: 565 GKCGDLRSA-NFSFDAVAVKGSLTWTAIIEA 594
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 156/352 (44%), Gaps = 25/352 (7%)
Query: 96 PTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRY----GVVPNKFTYPFVLK 151
P++ P S + ++ + I+ FA + + L++ T+L Y G+ N T+ +L+
Sbjct: 66 PSSLPLHSK-NPYIIHRDIQIFA-----RQNNLEVALTILDYLEQRGIPVNATTFSALLE 119
Query: 152 ACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKV 211
AC L GK VH + G + + ++ ++HMY A KV
Sbjct: 120 ACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKD-----------AQKV 168
Query: 212 FDESPKTDSVTWSAMIGGYARRGHS--SRAVGLFREMQVMGVCPDEITMVSVLTACADLG 269
FDES ++ +W+A++ G G + F EM+ +GV + ++ +V + A
Sbjct: 169 FDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGAS 228
Query: 270 ALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIV 329
AL G + + SV L +L+DM+ KCG V A +F ++ IV W ++I
Sbjct: 229 ALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIA 288
Query: 330 GLAMHGRGSEAVSLFDEMV-EQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGI 388
GLA + R EA+ LF M+ E+ + P+ V +L K + G+ + +
Sbjct: 289 GLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNY 348
Query: 389 VPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGEL 440
V + + ++DL + G + V + N I W ++++ A G
Sbjct: 349 VEQPFVHSGLIDLYCKCGDMASGRR-VFYGSKQRNAISWTALMSGYAANGRF 399
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 112/269 (41%), Gaps = 36/269 (13%)
Query: 230 YARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKS 289
+AR+ + A+ + ++ G+ + T ++L AC +L GK + +I + +
Sbjct: 86 FARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESN 145
Query: 290 VELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHG--RGSEAVSLFDEM 347
L L+ M+ CG V A +F + S + SW +++ G + G R + +S F EM
Sbjct: 146 EFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEM 205
Query: 348 VEQGVEPDDVSFIGVLSACCHSKLVDKG---------RSYFNSME------------GNF 386
E GV+ + S V + + + +G FNS+ G
Sbjct: 206 RELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKV 265
Query: 387 GIVPK---------IEHYGCMVDLLSRAGFVKEALDFVRTMPVE----PNQIIWRSIITA 433
G+ + I +G M+ L+ EAL RTM E PN +I +I+
Sbjct: 266 GLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPV 325
Query: 434 CHARGELKLGESISKELLRNEPTHESNYV 462
LKLG+ + +L+++ E +V
Sbjct: 326 LGDVKALKLGKEVHAHVLKSKNYVEQPFV 354
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 161/359 (44%), Gaps = 28/359 (7%)
Query: 91 LFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVL 150
LF D + P S + F+ L+ A A + + L M G+ N +TY ++
Sbjct: 68 LFGDMVKSRPFPSIVE---FSKLLSAIAKMNKFDLV-ISLGEQMQNLGISHNLYTYSILI 123
Query: 151 KACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGK 210
S L L AV ++K G++ D+ N++++ + L G+
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVS-------LVGQ 176
Query: 211 VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGA 270
+ + + DS T++ +I G R +S AV L M V G PD +T V+ G
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 271 LELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDS----CTIVSWTS 326
++L L +E KI V + N +ID +V+ A+NLF +MD+ +V++ S
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACC-HSKLVDKGRSYFNSMEGN 385
+I L +GR S+A L +M+E+ + P+ V+F ++ A KLV+ + Y ++ +
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 386 FGIVPKIEHYG------CMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITA-CHAR 437
I P I Y CM D L A K + + + PN + + ++I C A+
Sbjct: 357 --IDPDIFTYSSLINGFCMHDRLDEA---KHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 100/445 (22%), Positives = 180/445 (40%), Gaps = 42/445 (9%)
Query: 106 DAFLFNTLIRA-FAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKA 164
D+F FNTLI F H S++ + L M+ G P+ TY V+ D+ L +
Sbjct: 185 DSFTFNTLIHGLFRHNRASEA--VALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 165 VHGSVVKFGFDDDLHVQNTMIH----------------------------MYXXXXXXXX 196
+ + + + + + NT+I Y
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 197 XXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEI 256
L + + + VT+SA+I + + G A L+ EM + PD
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 257 TMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM 316
T S++ L+ K + + K +V N LI F K VD+ M LFR+M
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
Query: 317 DS----CTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLV 372
V++T++I G A +F +MV GV PD +++ +L C++ V
Sbjct: 423 SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV 482
Query: 373 DKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRS 429
+ F ++ + + P I Y M++ + +AG V++ D ++ V+PN + + +
Sbjct: 483 ETALVVFEYLQRS-KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 430 IITACHARGELKLGESISKELLRNEPTHES-NYVLLSNIYAKLRRWEQKTKVREMMDMRG 488
+++ +G + +++ +E+ P +S Y L I A LR ++ + +MR
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTL--IRAHLRDGDKAASAELIREMRS 599
Query: 489 MKKVPGSTMIELNNEMCEFVAGDKS 513
+ V ++ I L M DKS
Sbjct: 600 CRFVGDASTIGLVTNMLHDGRLDKS 624
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 119/272 (43%), Gaps = 11/272 (4%)
Query: 222 TWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTA-CADLGALELGKWLESY 280
T+S +I + RR S A+ + +M +G PD +T+ S+L C + +
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 281 IEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM--DSCT--IVSWTSVIVGLAMHGR 336
+E P S N LI + +A+ L +M C +V++ V+ GL G
Sbjct: 178 VEMGYQPDSFTF-NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 337 GSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYG 396
A+SL +M + +EP V + ++ A C+ K V+ + F M+ N GI P + Y
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMD-NKGIRPNVVTYN 295
Query: 397 CMVDLLSRAGFVKEALDFVRTM---PVEPNQIIWRSIITACHARGELKLGESISKELLRN 453
++ L G +A + M + PN + + ++I A G+L E + E+++
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Query: 454 EPTHES-NYVLLSNIYAKLRRWEQKTKVREMM 484
+ Y L N + R ++ + E+M
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 145/314 (46%), Gaps = 19/314 (6%)
Query: 129 QLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMY 188
++ R M G+VP+ +Y +++ C+ DL + A +VK G + NT+IH
Sbjct: 313 EVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIH-- 370
Query: 189 XXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQV 248
L ++ ++ DSVT++ +I GY + G + +A L EM
Sbjct: 371 -----GLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMT 425
Query: 249 MGVCPDEITMVSVL-TACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVD 307
G+ P + T S++ C E + E + K + + + N L+D G++D
Sbjct: 426 DGIQPTQFTYTSLIYVLCRKNKTREADELFEKVV-GKGMKPDLVMMNTLMDGHCAIGNMD 484
Query: 308 KAMNLFRQMDSCTI----VSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVL 363
+A +L ++MD +I V++ ++ GL G+ EA L EM +G++PD +S+ ++
Sbjct: 485 RAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 544
Query: 364 SACCHSKLVDKGRSYFNSMEG-NFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVE- 421
S +SK D ++ E + G P + Y ++ LS+ + A + +R M E
Sbjct: 545 SG--YSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEG 602
Query: 422 --PNQIIWRSIITA 433
PN + S+I A
Sbjct: 603 IVPNDSSFCSVIEA 616
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 87/436 (19%), Positives = 172/436 (39%), Gaps = 35/436 (8%)
Query: 130 LYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYX 189
Y M R + N +T+ ++ L+ K G + FG + NT++ +
Sbjct: 212 FYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFS 271
Query: 190 XXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVM 249
+ ++ + + D T++ ++ G RA + REM+ +
Sbjct: 272 LRGRIEGARL-------IISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEI 321
Query: 250 GVCPDEITMVSVLTACADLGALELG-KWLESYIEWKKIPKSVELCNALIDMFAKCGDVDK 308
G+ PD ++ ++ C++ G LE+ + + ++ +P + N LI ++
Sbjct: 322 GLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVP-TFYTYNTLIHGLFMENKIEA 380
Query: 309 AMNLFRQMDSCTI----VSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLS 364
A L R++ I V++ +I G HG +A +L DEM+ G++P ++ ++
Sbjct: 381 AEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIY 440
Query: 365 ACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVR---TMPVE 421
C + F + G G+ P + ++D G + A ++ M +
Sbjct: 441 VLCRKNKTREADELFEKVVGK-GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSIN 499
Query: 422 PNQIIWRSIITACHARGELKLGESISKELLRN--EPTHESNYVLLSNIYAKLRRWEQKTK 479
P+ + + ++ G+ + + E+ R +P H S L+S Y+K +
Sbjct: 500 PDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISG-YSKKGDTKHAFM 558
Query: 480 VREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYVPT 539
VR+ M G N + + A K + Q E+ +E+ RE+K G VP
Sbjct: 559 VRDEMLSLG-----------FNPTLLTYNALLKGLSK-NQEGELAEELLREMKSEGIVPN 606
Query: 540 TSQVLLDIDEEDKEDA 555
S I+ DA
Sbjct: 607 DSSFCSVIEAMSNLDA 622
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 121/281 (43%), Gaps = 14/281 (4%)
Query: 89 SFLFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPF 148
+F + D+ +F + +NTLI + +++ + L R + G+V + TY
Sbjct: 346 AFAYRDEMVKQGMVPTF--YTYNTLIHGLFMENKIEAAEI-LIREIREKGIVLDSVTYNI 402
Query: 149 VLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLA 208
++ D + A+H ++ G ++I++ L
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADE-------LF 455
Query: 209 GKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADL 268
KV + K D V + ++ G+ G+ RA L +EM +M + PD++T ++
Sbjct: 456 EKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGE 515
Query: 269 GALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSC----TIVSW 324
G E + L ++ + I N LI ++K GD A + +M S T++++
Sbjct: 516 GKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTY 575
Query: 325 TSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSA 365
+++ GL+ + G A L EM +G+ P+D SF V+ A
Sbjct: 576 NALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 117/232 (50%), Gaps = 8/232 (3%)
Query: 207 LAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACA 266
L V D P + VT+ +I G+ +RG RA LF+ M+ G+ PD I +++
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332
Query: 267 DLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM----DSCTIV 322
G L +G L S K + V + ++ ID++ K GD+ A ++++M S +V
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVV 392
Query: 323 SWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM 382
++T +I GL GR EA ++ +++++G+EP V++ ++ C + G + + M
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 383 EGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTM---PVEPNQIIWRSII 431
G P + YG +VD LS+ G + A+ F M + N +++ S+I
Sbjct: 453 I-KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 156/375 (41%), Gaps = 22/375 (5%)
Query: 130 LYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYX 189
+Y +L+ G+ P+ TY ++ +LR G A++ ++K G+ D+ + ++
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD--- 469
Query: 190 XXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVM 249
+ K+ +S + + V ++++I G+ R A+ +FR M +
Sbjct: 470 ----GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 250 GVCPDEITMVSVLTACADLGAL------ELGKWLESYIEWKKIPKSVELCNALIDMFAKC 303
G+ PD T +V+ A +G L ++ KI + +CN +I + KC
Sbjct: 526 GIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 585
Query: 304 GDVDKAMNLFRQMDSCT----IVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSF 359
++ A F + IV++ ++I G R EA +F+ + P+ V+
Sbjct: 586 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTL 645
Query: 360 IGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP 419
++ C + +D F+ M G P YGC++D S++ ++ + M
Sbjct: 646 TILIHVLCKNNDMDGAIRMFSIMAEK-GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 704
Query: 420 ---VEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHE-SNYVLLSNIYAKLRRWE 475
+ P+ + + II RG + +I + + + + Y +L Y K+ R
Sbjct: 705 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLV 764
Query: 476 QKTKVREMMDMRGMK 490
+ + E M G+K
Sbjct: 765 EAALLYEHMLRNGVK 779
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 139/321 (43%), Gaps = 47/321 (14%)
Query: 105 FDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKA-------CAGLS 157
+ +FN+LI + + + L+++R M YG+ P+ T+ V++ C +
Sbjct: 494 LNVVVFNSLIDGWCRLNRFDEA-LKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMK 552
Query: 158 DLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDE--- 214
+G + + + D+ V N +IH+ A K F+
Sbjct: 553 P-TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED-----------ASKFFNNLIE 600
Query: 215 -SPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITM---VSVLTACADL-G 269
+ D VT++ MI GY A +F ++V P+ +T+ + VL D+ G
Sbjct: 601 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDG 660
Query: 270 ALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD----SCTIVSWT 325
A+ + + E P +V L+D F+K D++ + LF +M S +IVS++
Sbjct: 661 AIRMFSIMA---EKGSKPNAVTY-GCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 716
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCH-SKLVDKGRSYFNSMEG 384
+I GL GR EA ++F + ++ + PD V++ ++ C +LV+ Y + +
Sbjct: 717 IIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 776
Query: 385 NFGIVPKIEHYGCMVDLLSRA 405
G+ P DLL RA
Sbjct: 777 --GVKPD--------DLLQRA 787
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 117/232 (50%), Gaps = 8/232 (3%)
Query: 207 LAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACA 266
L V D P + VT+ +I G+ +RG RA LF+ M+ G+ PD I +++
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332
Query: 267 DLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM----DSCTIV 322
G L +G L S K + V + ++ ID++ K GD+ A ++++M S +V
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVV 392
Query: 323 SWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM 382
++T +I GL GR EA ++ +++++G+EP V++ ++ C + G + + M
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 383 EGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTM---PVEPNQIIWRSII 431
G P + YG +VD LS+ G + A+ F M + N +++ S+I
Sbjct: 453 I-KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/404 (19%), Positives = 158/404 (39%), Gaps = 51/404 (12%)
Query: 130 LYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYX 189
+Y +L+ G+ P+ TY ++ +LR G A++ ++K G+ D+ + ++
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD--- 469
Query: 190 XXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVM 249
+ K+ +S + + V ++++I G+ R A+ +FR M +
Sbjct: 470 ----GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 250 GVCPDEITMVSVLTACADLGALE-----------------------------------LG 274
G+ PD T +V+ G LE +G
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIG 585
Query: 275 KWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCT----IVSWTSVIVG 330
L ++ KI + +CN +I + KC ++ A F + IV++ ++I G
Sbjct: 586 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 645
Query: 331 LAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVP 390
R EA +F+ + P+ V+ ++ C + +D F+ M G P
Sbjct: 646 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK-GSKP 704
Query: 391 KIEHYGCMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRSIITACHARGELKLGESIS 447
YGC++D S++ ++ + M + P+ + + II RG + +I
Sbjct: 705 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Query: 448 KELLRNEPTHE-SNYVLLSNIYAKLRRWEQKTKVREMMDMRGMK 490
+ + + + Y +L Y K+ R + + E M G+K
Sbjct: 765 HQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 808
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 106/260 (40%), Gaps = 20/260 (7%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
DA + TLI AF + GLQL+ M R + + V+ +
Sbjct: 565 DALAYCTLIDAFCKH-MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKF 623
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKT----DSV 221
++++ + D+ NTMI Y A ++F+ T ++V
Sbjct: 624 FNNLIEGKMEPDIVTYNTMICGYCSLRRLDE-----------AERIFELLKVTPFGPNTV 672
Query: 222 TWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYI 281
T + +I + A+ +F M G P+ +T ++ + +E L +
Sbjct: 673 TLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 732
Query: 282 EWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCT----IVSWTSVIVGLAMHGRG 337
+ K I S+ + +ID K G VD+A N+F Q +V++ +I G GR
Sbjct: 733 QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRL 792
Query: 338 SEAVSLFDEMVEQGVEPDDV 357
EA L++ M+ GV+PDD+
Sbjct: 793 VEAALLYEHMLRNGVKPDDL 812
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 165/371 (44%), Gaps = 19/371 (5%)
Query: 91 LFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVL 150
LFSD + P S D FN L+ A + + L + M G+ + +T+ V+
Sbjct: 72 LFSDMVKSRPFPSIVD---FNRLLSAIVKLKKYDVV-ISLGKKMEVLGIRNDLYTFNIVI 127
Query: 151 KACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGK 210
+ L ++ G ++K G++ D ++++ + L K
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS-------LVDK 180
Query: 211 VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGA 270
+ + K D V ++A+I + + A F+E++ G+ P+ +T +++ +
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 271 LELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTI----VSWTS 326
L S + KKI +V +AL+D F K G V +A LF +M +I V+++S
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNF 386
+I GL +H R EA +FD MV +G D VS+ +++ C +K V+ G F M
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR- 359
Query: 387 GIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRSIITACHARGELKLG 443
G+V Y ++ +AG V +A +F M + P+ + ++ GEL+
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419
Query: 444 ESISKELLRNE 454
I +++ + E
Sbjct: 420 LVIFEDMQKRE 430
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 122/268 (45%), Gaps = 21/268 (7%)
Query: 125 SSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTM 184
S +L M++ + PN TY +L A + K + +V+ D D+ +++
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 185 IHMYXXXXXXXXXXXXXXXXXXLAGKVFD----ESPKTDSVTWSAMIGGYARRGHSSRAV 240
I+ A ++FD + D V+++ +I G+ + +
Sbjct: 302 INGLCLHDRIDE-----------ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350
Query: 241 GLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMF 300
LFREM G+ + +T +++ G ++ + S +++ I + N L+
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 301 AKCGDVDKAMNLF-----RQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPD 355
G+++KA+ +F R+MD IV++T+VI G+ G+ EA SLF + +G++PD
Sbjct: 411 CDNGELEKALVIFEDMQKREMD-LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Query: 356 DVSFIGVLSACCHSKLVDKGRSYFNSME 383
V++ ++S C L+ + + + M+
Sbjct: 470 IVTYTTMMSGLCTKGLLHEVEALYTKMK 497
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 163/421 (38%), Gaps = 56/421 (13%)
Query: 91 LFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVL 150
LF + + PR D F+ L A T Q L L + M G+ N +T ++
Sbjct: 59 LFQEMTRSRPRPRLID---FSRLFSVVARTKQYDLV-LDLCKQMELKGIAHNLYTLSIMI 114
Query: 151 KACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGK 210
C L L + G ++K G++ D +T+I+ L +
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLIN-------GLCLEGRVSEALELVDR 167
Query: 211 VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGA 270
+ + K +T +A++ G G S AV L M G P+E+T VL G
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 271 LELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD----SCTIVSWTS 326
L L +E +KI + +ID K G +D A NLF +M+ I+ +T+
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 327 VIVGLAMHGRGS-----------------------------------EAVSLFDEMVEQG 351
+I G GR EA L EM+++G
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 352 VEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEA 411
+ PD V++ ++ C +DK + M G P I + +++ +A + +
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK-GCGPNIRTFNILINGYCKANLIDDG 406
Query: 412 LDFVRTMP---VEPNQIIWRSIITACHARGELKLGESISKELL--RNEPTHESNYVLLSN 466
L+ R M V + + + ++I G+L++ + + +E++ R P S +LL
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 467 I 467
+
Sbjct: 467 L 467
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 129/304 (42%), Gaps = 17/304 (5%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D ++ TLIR F + + G +L R M++ + P+ + ++ LR + +
Sbjct: 281 DIIIYTTLIRGFCYAGRW-DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
H +++ G D ++I + + + + + T++
Sbjct: 340 HKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH-------MLDLMVSKGCGPNIRTFNI 392
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
+I GY + + LFR+M + GV D +T +++ +LG LE+ K L + ++
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCT----IVSWTSVIVGLAMHGRGSEAV 341
+ + L+D G+ +KA+ +F +++ I + +I G+ + +A
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512
Query: 342 SLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDL 401
LF + +GV+PD ++ ++ C + + F ME + G P GC ++
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED-GHSPN----GCTYNI 567
Query: 402 LSRA 405
L RA
Sbjct: 568 LIRA 571
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 181/420 (43%), Gaps = 26/420 (6%)
Query: 115 RAFAHTPQSKSSGL--QLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKF 172
+ + +SK+ L L+ M G+ + ++Y V+ S + +V G ++KF
Sbjct: 74 KVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKF 133
Query: 173 GFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYAR 232
G++ D+ +++I+ + L K+ + + D V ++ +I G +
Sbjct: 134 GYEPDVVTVSSLINGFCQGNRVFDAID-------LVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 233 RGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVEL 292
G + AV LF M+ GV D +T S++ G L + + I +V
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 293 CNALIDMFAKCGDVDKAMNLFRQMDS-CT---IVSWTSVIVGLAMHGRGSEAVSLFDEMV 348
A+ID+F K G +AM L+ +M C + ++ S+I GL MHGR EA + D MV
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 349 EQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFV 408
+G PD V++ +++ C SK VD+G F M G+V Y ++ +AG
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM-AQRGLVGDTITYNTIIQGYFQAGRP 365
Query: 409 KEALDFVRTMPVEPN----QIIWRSIITACHARGELKLGESISKELLRNEPTHESNYVLL 464
A + M PN I+ + L L E++ K + + T Y ++
Sbjct: 366 DAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT---TYNIV 422
Query: 465 SNIYAKLRRWEQKTKVREMMDMRGMKK--VPGSTMIELNNEMCEFVAGDKSHDQYKQIYE 522
+ K+ E + + +G+K V +TMI + C DKS Y+++ E
Sbjct: 423 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI---SGFCRKRQWDKSDLLYRKMQE 479
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 160/359 (44%), Gaps = 28/359 (7%)
Query: 91 LFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVL 150
LF D + P S + FN L+ A A + + + L M G+ + +TY +
Sbjct: 70 LFGDMVKSRPFPSIVE---FNKLLSAVAKMNKFELV-ISLGEQMQTLGISHDLYTYSIFI 125
Query: 151 KACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGK 210
S L L AV ++K G++ D+ +++++ Y L +
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA-------LVDQ 178
Query: 211 VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGA 270
+ + K D+ T++ +I G +S AV L +M G PD +T +V+ G
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 271 LELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTI----VSWTS 326
++L L +E KI V + N +ID K +D A+NLF +MD+ I +++S
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACC-HSKLVDKGRSYFNSMEGN 385
+I L +GR S+A L +M+E+ + P+ V+F ++ A KLV+ + Y ++ +
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 386 FGIVPKIEHYG------CMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITA-CHAR 437
I P I Y CM D L A K + + + PN + + ++I C A+
Sbjct: 359 --IDPDIFTYSSLINGFCMHDRLDEA---KHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 101/445 (22%), Positives = 179/445 (40%), Gaps = 42/445 (9%)
Query: 106 DAFLFNTLIRA-FAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKA 164
D F F TLI F H S++ + L M++ G P+ TY V+ D+ L +
Sbjct: 187 DTFTFTTLIHGLFLHNKASEA--VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 165 VHGSVVKFGFDDDLHVQNTMI-------HM---------------------YXXXXXXXX 196
+ + K + D+ + NT+I HM Y
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 197 XXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEI 256
L + + + VT+SA+I + + G A L+ EM + PD
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 364
Query: 257 TMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM 316
T S++ L+ K + + K +V + LI F K V++ M LFR+M
Sbjct: 365 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
Query: 317 DS----CTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLV 372
V++T++I G A +F +MV GV P+ +++ +L C + +
Sbjct: 425 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 484
Query: 373 DKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRS 429
K F ++ + + P I Y M++ + +AG V++ + + V PN I + +
Sbjct: 485 AKAMVVFEYLQRS-TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543
Query: 430 IITACHARGELKLGESISKELLRNEPTHES-NYVLLSNIYAKLRRWEQKTKVREMMDMRG 488
+I+ +G + +S+ K++ + P S Y L I A+LR +++ + +MR
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTL--IRARLRDGDREASAELIKEMRS 601
Query: 489 MKKVPGSTMIELNNEMCEFVAGDKS 513
++ I L M DKS
Sbjct: 602 CGFAGDASTIGLVTNMLHDGRLDKS 626
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 122/304 (40%), Gaps = 69/304 (22%)
Query: 219 DSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLE 278
D T+S I + RR S A+ + +M +G PD +T+ S+L
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNG-------------- 162
Query: 279 SYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGS 338
Y K+I +V L + +++M K D+ T +T++I GL +H + S
Sbjct: 163 -YCHSKRISDAVALVDQMVEMGYK-------------PDTFT---FTTLIHGLFLHNKAS 205
Query: 339 EAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSME--------------- 383
EAV+L D+MV++G +PD V++ V++ C +D S ME
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 384 -------------------GNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTM---PVE 421
N GI P + Y ++ L G +A + M +
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Query: 422 PNQIIWRSIITACHARGELKLGESISKELLRNEPTHES-NYVLLSNIYAKLRRWEQKTKV 480
PN + + ++I A G+L E + E+++ + Y L N + R ++ +
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 481 REMM 484
E+M
Sbjct: 386 FELM 389
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 163/354 (46%), Gaps = 24/354 (6%)
Query: 108 FLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHG 167
F FN L+ A A + + L M R G+ N +TY ++ S + L A+ G
Sbjct: 11 FEFNKLLSAIAKMKKFDLV-ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 69
Query: 168 SVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMI 227
++K G++ + +++++ Y L ++ + + D++T++ +I
Sbjct: 70 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA-------LVDQMVEMGYRPDTITFTTLI 122
Query: 228 GGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIP 287
G +S AV L M G P+ +T V+ G ++L L + +E KI
Sbjct: 123 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 182
Query: 288 KSVELCNALIDMFAKCGDVDKAMNLFRQMDS----CTIVSWTSVIVGLAMHGRGSEAVSL 343
V + N +ID K VD A+NLF++M++ +V+++S+I L +GR S+A L
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 242
Query: 344 FDEMVEQGVEPDDVSFIGVLSACC-HSKLVDKGRSYFNSMEGNFGIVPKIEHYG------ 396
+M+E+ + P+ V+F ++ A K V+ + + + ++ + I P I Y
Sbjct: 243 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS--IDPDIFTYNSLINGF 300
Query: 397 CMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKEL 450
CM D L +A K+ +F+ + P+ + ++I ++ G + +E+
Sbjct: 301 CMHDRLDKA---KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 351
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 181/445 (40%), Gaps = 42/445 (9%)
Query: 106 DAFLFNTLIRA-FAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLG-- 162
D F TLI F H S++ + L M++ G PN TY V+ D+ L
Sbjct: 114 DTITFTTLIHGLFLHNKASEA--VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 171
Query: 163 -------KAVHGSVVKFG-----------FDDDLHVQNTM--------IHMYXXXXXXXX 196
+ VV F DD L++ M + Y
Sbjct: 172 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 231
Query: 197 XXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEI 256
L + ++ + VT++A+I + + G A L +M + PD
Sbjct: 232 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF 291
Query: 257 TMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM 316
T S++ L+ K + ++ K ++ N LI F K V+ LFR+M
Sbjct: 292 TYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 351
Query: 317 DSCTIV----SWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLV 372
+V ++T++I GL G A +F +MV GV PD +++ +L C++ +
Sbjct: 352 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 411
Query: 373 DKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRS 429
+K F+ M+ + I I Y M++ + +AG V + D ++ V+PN + + +
Sbjct: 412 EKALEVFDYMQKS-EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 470
Query: 430 IITACHARGELKLGESISKELLRNEPTHES-NYVLLSNIYAKLRRWEQKTKVREMMDMRG 488
+I+ ++ L+ ++ K++ + P +S Y L I A LR ++ + +MR
Sbjct: 471 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTL--IRAHLRDGDKAASAELIREMRS 528
Query: 489 MKKVPGSTMIELNNEMCEFVAGDKS 513
+ V ++ I L M DKS
Sbjct: 529 CRFVGDASTIGLVANMLHDGRLDKS 553
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 174/389 (44%), Gaps = 30/389 (7%)
Query: 81 FNAIHYATSF-LFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGV 139
++I + +F LF + + P S D F L+ A A+ + ++ + + M YG+
Sbjct: 47 LHSIRFEDAFALFFEMVHSQPLPSIVD---FTRLLTATANLRRYETV-IYFSQKMELYGI 102
Query: 140 VPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXX 199
+ +++ ++ S L +V G ++K G++ + +++H +
Sbjct: 103 SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162
Query: 200 XXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMV 259
L + + + V ++ +I G + G + A+ L EM+ G+ D +T
Sbjct: 163 -------LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215
Query: 260 SVLTACADLGALELGKWLESY-----IEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFR 314
++LT G G+W ++ + + I V ALID+F K G++D+A L++
Sbjct: 216 TLLT-----GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYK 270
Query: 315 QMDSCTI----VSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSK 370
+M ++ V++ S+I GL MHGR +A FD M +G P+ V++ ++S C +
Sbjct: 271 EMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR 330
Query: 371 LVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSI 430
+VD+G F M G I Y ++ + G ++ ALD M ++ + I
Sbjct: 331 MVDEGMKLFQRMSCE-GFNADIFTYNTLIHGYCQVGKLRVALDIFCWM---VSRRVTPDI 386
Query: 431 ITACHARGELKLGESISKELLRNEPTHES 459
IT C L + I L++ + ES
Sbjct: 387 ITHCILLHGLCVNGEIESALVKFDDMRES 415
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 153/334 (45%), Gaps = 23/334 (6%)
Query: 128 LQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHM 187
+ L M G+ N +TY ++ S L L AV G ++K G++ ++ +++++
Sbjct: 101 ISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNG 160
Query: 188 YXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQ 247
Y L ++F + ++VT++ +I G +S A+ L M
Sbjct: 161 YCHSKRISEAVA-------LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV 213
Query: 248 VMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVD 307
G PD +T V+ G +L L + +E K+ V + N +ID K +D
Sbjct: 214 AKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMD 273
Query: 308 KAMNLFRQMDS----CTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVL 363
A+NLF++M++ +V+++S+I L +GR S+A L +M+E+ + PD +F ++
Sbjct: 274 DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 333
Query: 364 SACC-HSKLVDKGRSYFNSMEGNFGIVPKIEHYG------CMVDLLSRAGFVKEALDFVR 416
A KLV+ + Y ++ + I P I Y CM D L A K+ +F+
Sbjct: 334 DAFVKEGKLVEAEKLYDEMVKRS--IDPSIVTYSSLINGFCMHDRLDEA---KQMFEFMV 388
Query: 417 TMPVEPNQIIWRSIITACHARGELKLGESISKEL 450
+ P+ + + ++I ++ G + +E+
Sbjct: 389 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 137/302 (45%), Gaps = 9/302 (2%)
Query: 219 DSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLE 278
D T+SA+I + + G A L+ EM + P +T S++ L+ K +
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 279 SYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDS----CTIVSWTSVIVGLAMH 334
++ K V N LI F K V++ M +FR+M V++ +I GL
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
Query: 335 GRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEH 394
G A +F EMV GV P+ +++ +L C + ++K F ++ + + P I
Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIYT 503
Query: 395 YGCMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRSIITACHARGELKLGESISKELL 451
Y M++ + +AG V++ D + V+P+ + + ++I+ +G + +++ KE +
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE-M 562
Query: 452 RNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGD 511
+ + T ++ + I A+LR +++ + +MR ++ I L M D
Sbjct: 563 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLD 622
Query: 512 KS 513
KS
Sbjct: 623 KS 624
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 116/279 (41%), Gaps = 24/279 (8%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D F F+ LI AF + + +LY M++ + P+ TY ++ L K +
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAE-KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKT----DSV 221
+V D+ NT+I + +VF E + ++V
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM-----------EVFREMSQRGLVGNTV 432
Query: 222 TWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYI 281
T++ +I G + G A +F+EM GV P+ +T ++L G LE + Y+
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 282 EWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD----SCTIVSWTSVIVGLAMHGRG 337
+ K+ ++ N +I+ K G V+ +LF + +V++ ++I G G
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 338 SEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGR 376
EA +LF EM E G P+ G + ++L D R
Sbjct: 553 EEADALFKEMKEDGTLPNS----GCYNTLIRARLRDGDR 587
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 161/352 (45%), Gaps = 24/352 (6%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
FN L+ A A + + L M R +V +TY ++ S + L A+ G +
Sbjct: 88 FNKLLSAIAKMKKFDVV-ISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKM 146
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
+K G++ + +++++ Y L ++ + + D++T++ +I G
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVA-------LVDQMVEMGYRPDTITFTTLIHG 199
Query: 230 YARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKS 289
+S AV L M G P+ +T V+ G +L L + +E KI
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 259
Query: 290 VELCNALIDMFAKCGDVDKAMNLFRQMDS----CTIVSWTSVIVGLAMHGRGSEAVSLFD 345
V + N +ID K VD A+NLF++M++ +V+++S+I L +GR S+A L
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 346 EMVEQGVEPDDVSFIGVLSACC-HSKLVDKGRSYFNSMEGNFGIVPKIEHYG------CM 398
+M+E+ + P+ V+F ++ A K V+ + Y + ++ + I P I Y CM
Sbjct: 320 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS--IDPDIFTYNSLVNGFCM 377
Query: 399 VDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKEL 450
D L +A K+ +F+ + P+ + + ++I ++ G + +E+
Sbjct: 378 HDRLDKA---KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 182/445 (40%), Gaps = 42/445 (9%)
Query: 106 DAFLFNTLIRA-FAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACA--GLSDLRL- 161
D F TLI F H S++ + L M++ G PN TY V+ G +DL L
Sbjct: 189 DTITFTTLIHGLFLHNKASEA--VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 162 ------GKAVHGSVVKFG-----------FDDDLHVQNTM--------IHMYXXXXXXXX 196
+ VV F DD L++ M + Y
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 197 XXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEI 256
L + ++ + VT++A+I + + G A L+ +M + PD
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 366
Query: 257 TMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM 316
T S++ L+ K + ++ K V N LI F K V+ LFR+M
Sbjct: 367 TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426
Query: 317 DSCTIV----SWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLV 372
+V ++T++I GL G A +F +MV GV PD +++ +L C++ +
Sbjct: 427 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 486
Query: 373 DKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRS 429
+K F+ M+ + I I Y M++ + +AG V + D ++ V+PN + + +
Sbjct: 487 EKALEVFDYMQKS-EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 430 IITACHARGELKLGESISKELLRNEPTHES-NYVLLSNIYAKLRRWEQKTKVREMMDMRG 488
+I+ ++ L+ ++ K++ + P S Y L I A LR ++ + +MR
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTL--IRAHLRDGDKAASAELIREMRS 603
Query: 489 MKKVPGSTMIELNNEMCEFVAGDKS 513
+ V ++ I L M DKS
Sbjct: 604 CRFVGDASTIGLVANMLHDGRLDKS 628
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/418 (22%), Positives = 176/418 (42%), Gaps = 57/418 (13%)
Query: 91 LFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVL 150
LF D + P S + FN L+ A A + + + L M G+ + +TY +
Sbjct: 70 LFGDMVKSRPFPSIVE---FNKLLSAVAKMNKFELV-ISLGEQMQTLGISHDLYTYSIFI 125
Query: 151 KACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGK 210
S L L AV ++K G++ D+ +++++ Y L +
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA-------LVDQ 178
Query: 211 VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGA 270
+ + K D+ T++ +I G +S AV L +M G PD +T +V+ G
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 271 LELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDS----CTIVSWTS 326
++L L + +E +I +V + N +ID K V+ A++LF +M++ +V++ S
Sbjct: 239 IDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNS 298
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSA--------------------- 365
+I L +GR S+A L M+E+ + P+ V+F ++ A
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 366 ---------------CCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKE 410
C H++L D+ + F M +P I+ Y +++ + V++
Sbjct: 359 IDPDTITYNLLINGFCMHNRL-DEAKQMFKFMVSK-DCLPNIQTYNTLINGFCKCKRVED 416
Query: 411 ALDFVRTMP---VEPNQIIWRSIITACHARGELKLGESISKELLRNE-PTHESNYVLL 464
++ R M + N + + +II G+ + + K+++ N PT Y +L
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL 474
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/446 (21%), Positives = 176/446 (39%), Gaps = 47/446 (10%)
Query: 106 DAFLFNTLIRA-FAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKA 164
D F F TLI F H S++ + L M++ G P+ TY V+ D+ L
Sbjct: 187 DTFTFTTLIHGLFLHNKASEA--VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 165 VHGSVVKFGFDDDLHVQNTMIH----------------------------MYXXXXXXXX 196
+ + ++ + NT+I Y
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304
Query: 197 XXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEI 256
L + ++ + VT++A+I + + G A L EM + PD I
Sbjct: 305 NYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTI 364
Query: 257 TMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM 316
T ++ L+ K + ++ K +++ N LI+ F KC V+ + LFR+M
Sbjct: 365 TYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM 424
Query: 317 DS----CTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLV 372
V++T++I G G A +F +MV V D +++ +L C +
Sbjct: 425 SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKL 484
Query: 373 DKGRSYF-----NSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIW 427
D F + ME N I Y M++ + +AG V EA D ++ ++P+ + +
Sbjct: 485 DTALVIFKYLQKSEMELNIFI------YNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTY 538
Query: 428 RSIITACHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMR 487
++I+ ++ L+ + + ++ ++ + T ++ + I A LR ++ + +MR
Sbjct: 539 NTMISGLCSKRLLQEADDLFRK-MKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMR 597
Query: 488 GMKKVPGSTMIELNNEMCEFVAGDKS 513
V ++ I L M DKS
Sbjct: 598 SSGFVGDASTISLVTNMLHDGRLDKS 623
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 136/317 (42%), Gaps = 13/317 (4%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D + FNTL+ K + +++ ML+ G P+ +TY V+ L +++ V
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHA-IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
++ + NT+I LA + + D T+++
Sbjct: 353 LDQMITRDCSPNTVTYNTLI-------STLCKENQVEEATELARVLTSKGILPDVCTFNS 405
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
+I G + A+ LF EM+ G PDE T ++ + G L+ + +E
Sbjct: 406 LIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG 465
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMD----SCTIVSWTSVIVGLAMHGRGSEAV 341
+SV N LID F K +A +F +M+ S V++ ++I GL R +A
Sbjct: 466 CARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAA 525
Query: 342 SLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDL 401
L D+M+ +G +PD ++ +L+ C + K +M N G P I YG ++
Sbjct: 526 QLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN-GCEPDIVTYGTLISG 584
Query: 402 LSRAGFVKEALDFVRTM 418
L +AG V+ A +R++
Sbjct: 585 LCKAGRVEVASKLLRSI 601
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 143/341 (41%), Gaps = 18/341 (5%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D FN LI+A Q + + L L M YG+VP++ T+ V++ DL +
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILML-EDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
+V+FG N ++H + G D T++
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF------PDQYTFNT 300
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGAL-ELGKWLESYIEWK 284
++ G + GH A+ + M G PD T SV++ LG + E + L+ I
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIV----SWTSVIVGLAMHGRGSEA 340
P +V N LI K V++A L R + S I+ ++ S+I GL + A
Sbjct: 361 CSPNTVTY-NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 341 VSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVD 400
+ LF+EM +G EPD+ ++ ++ + C +D+ + ME + G + Y ++D
Sbjct: 420 MELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS-GCARSVITYNTLID 478
Query: 401 LLSRAGFVKEA---LDFVRTMPVEPNQIIWRSIITA-CHAR 437
+A +EA D + V N + + ++I C +R
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR 519
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 110/272 (40%), Gaps = 21/272 (7%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D FN+LI+ T ++ ++L+ M G P++FTY ++ + L +
Sbjct: 399 DVCTFNSLIQGLCLT-RNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDE----SPKTDSV 221
+ G + NT+I + A ++FDE +SV
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTRE-----------AEEIFDEMEVHGVSRNSV 506
Query: 222 TWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYI 281
T++ +I G + A L +M + G PD+ T S+LT G ++ + +
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 566
Query: 282 EWKKIPKSVELCNALIDMFAKCGDVDKAMNLFR--QMDSCTIV--SWTSVIVGLAMHGRG 337
+ LI K G V+ A L R QM + ++ VI GL +
Sbjct: 567 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKT 626
Query: 338 SEAVSLFDEMVEQG-VEPDDVSFIGVLSACCH 368
+EA++LF EM+EQ PD VS+ V C+
Sbjct: 627 TEAINLFREMLEQNEAPPDAVSYRIVFRGLCN 658
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 165/381 (43%), Gaps = 18/381 (4%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
+ F +N LIR F + L L+ M G +PN TY ++ L + G +
Sbjct: 204 NVFTYNILIRGFCFAG-NIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
S+ G + +L N +I+ + ++ D VT++
Sbjct: 263 LRSMALKGLEPNLISYNVVIN-------GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
+I GY + G+ +A+ + EM G+ P IT S++ + G + + +
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMD----SCTIVSWTSVIVGLAMHGRGSEAV 341
+ + L+D F++ G +++A + R+M+ S ++V++ ++I G + G+ +A+
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 342 SLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDL 401
++ ++M E+G+ PD VS+ VLS C S VD+ M GI P Y ++
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK-GIKPDTITYSSLIQG 494
Query: 402 LSRAGFVKEALDFVRTM---PVEPNQIIWRSIITACHARGELKLGESISKELLRNE--PT 456
KEA D M + P++ + ++I A G+L+ + E++ P
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554
Query: 457 HESNYVLLSNIYAKLRRWEQK 477
+ VL++ + + R E K
Sbjct: 555 VVTYSVLINGLNKQSRTREAK 575
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 121/292 (41%), Gaps = 38/292 (13%)
Query: 221 VTWSAMIGGYAR-RGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLES 279
++++A++ R + + S A +F+EM V P+ T ++ G +++ L
Sbjct: 170 LSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFD 229
Query: 280 YIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD----SCTIVSWTSVIVGLAMHG 335
+E K +V N LID + K +D L R M ++S+ VI GL G
Sbjct: 230 KMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREG 289
Query: 336 RGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNF--------- 386
R E + EM +G D+V++ ++ C EGNF
Sbjct: 290 RMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK--------------EGNFHQALVMHAE 335
Query: 387 ----GIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVE---PNQIIWRSIITACHARGE 439
G+ P + Y ++ + +AG + A++F+ M V PN+ + +++ +G
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 440 LKLGESISKELLRN--EPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGM 489
+ + +E+ N P+ + Y L N + + E V E M +G+
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVT-YNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 88/192 (45%), Gaps = 19/192 (9%)
Query: 210 KVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLG 269
++ ++ K D++T+S++I G+ + + A L+ EM +G+ PDE T +++ A G
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 534
Query: 270 ALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM------------- 316
LE L + + K + V + LI+ K +A L ++
Sbjct: 535 DLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYH 594
Query: 317 ---DSCTIVSWTSV---IVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSK 370
++C+ + + SV I G M G +EA +F+ M+ + +PD ++ ++ C +
Sbjct: 595 TLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAG 654
Query: 371 LVDKGRSYFNSM 382
+ K + + M
Sbjct: 655 DIRKAYTLYKEM 666
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 143/308 (46%), Gaps = 16/308 (5%)
Query: 138 GVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXX 197
G+ N +TY ++ S L L A+ G ++K G++ D+ N++++ +
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167
Query: 198 XXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEIT 257
L ++ + K D+VT++ +I G +S AV L M G PD +T
Sbjct: 168 VA-------LVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVT 220
Query: 258 MVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD 317
+V+ G +L L + +E KI +V + + +ID K D A+NLF +M+
Sbjct: 221 YGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 280
Query: 318 S----CTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVD 373
+ +++++S+I L +GR S+A L +M+E+ + P+ V+F ++ A +
Sbjct: 281 NKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV 340
Query: 374 KGRSYFNSMEGNFGIVPKIEHYGCMVD---LLSRAGFVKEALDFVRTMPVEPNQIIWRSI 430
K + M I P I Y +++ +L R G K+ L+ + PN + + ++
Sbjct: 341 KAEKLYEEMIKR-SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTL 399
Query: 431 ITA-CHAR 437
I C A+
Sbjct: 400 INGFCKAK 407
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 7/191 (3%)
Query: 221 VTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGAL-ELGKWLES 279
VT+SA+I + ++G +A L+ EM + P+ T S++ L L E + LE
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383
Query: 280 YIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDS----CTIVSWTSVIVGLAMHG 335
I +P V N LI+ F K VDK M LFR+M V++T++I G
Sbjct: 384 MIRKDCLPNVVTY-NTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 442
Query: 336 RGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHY 395
A +F +MV GV P+ +++ +L C + + K F ++ + + P I Y
Sbjct: 443 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS-TMEPDIYTY 501
Query: 396 GCMVDLLSRAG 406
M++ + +AG
Sbjct: 502 NIMIEGMCKAG 512
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 134/325 (41%), Gaps = 52/325 (16%)
Query: 207 LAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEIT---MVSVLT 263
L G + P + +S ++ A+ + +M+++G+ + T +++
Sbjct: 65 LFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFC 124
Query: 264 ACADLGALEL--GKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSC-- 319
C+ L GK ++ E P V L N+L++ F + A+ L QM
Sbjct: 125 RCSRLSLALALLGKMMKLGYE----PDIVTL-NSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 320 --TIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRS 377
V++T++I GL +H + SEAV+L D MV++G +PD V++ V++ C D +
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 378 YFNSMEG----------------------------------NFGIVPKIEHYGCMVDLLS 403
N ME N G+ P + Y ++ L
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 404 RAGFVKEALDFVRTM---PVEPNQIIWRSIITACHARGELKLGESISKELL-RNEPTHES 459
G +A + M + PN + + ++I A +G+L E + +E++ R+ +
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIF 359
Query: 460 NYVLLSNIYAKLRRWEQKTKVREMM 484
Y L N + L R + ++ E+M
Sbjct: 360 TYSSLINGFCMLDRLGEAKQMLELM 384
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 177/420 (42%), Gaps = 23/420 (5%)
Query: 91 LFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVL 150
LF D + P S + F+ L+ A A + + L M G+ N +TY +
Sbjct: 62 LFGDMVKSRPFPSIVE---FSKLLSAIAKMNKFDLV-ISLGEQMQNLGISHNLYTYSIFI 117
Query: 151 KACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGK 210
S L L A+ G ++K G+ + N++++ + L +
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA-------LVDQ 170
Query: 211 VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGA 270
+ + + D+VT++ ++ G + +S AV L M V G PD +T +V+ G
Sbjct: 171 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 230
Query: 271 LELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTI----VSWTS 326
+L L + +E KI V + N +ID K +D A +LF +M++ I ++
Sbjct: 231 PDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNP 290
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNF 386
+I L +GR S+A L +M+E+ + PD V F ++ A + + ++ M +
Sbjct: 291 LISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK 350
Query: 387 GIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRSIITACHARGELKLG 443
P + Y ++ + V+E ++ R M + N + + ++I +
Sbjct: 351 HCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 410
Query: 444 ESISKELLRN--EPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKK--VPGSTMIE 499
+ + K+++ + P + +LL + E V E M R MK V +TMIE
Sbjct: 411 QMVFKQMVSDGVHPDIMTYNILLDGLCNN-GNVETALVVFEYMQKRDMKLDIVTYTTMIE 469
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 219 DSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLE 278
++VT++ +I G+ + A +F++M GV PD +T +L + G +E +
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVF 449
Query: 279 SYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD----SCTIVSWTSVIVGLAMH 334
Y++ + + + +I+ K G V+ +LF + +V++T+++ G
Sbjct: 450 EYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 509
Query: 335 GRGSEAVSLFDEMVEQGVEPDDVSFIGVLSA-------CCHSKLVDKGRSY-FNSMEGNF 386
G EA +LF EM E G P+ ++ ++ A ++L+ + RS F F
Sbjct: 510 GLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569
Query: 387 GIVPKIEHYG----CMVDLLS 403
G+V + H G +D+LS
Sbjct: 570 GLVTNMLHDGRLDKSFLDMLS 590
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 139/311 (44%), Gaps = 22/311 (7%)
Query: 138 GVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXX 197
GV N +TY ++ S L A+ G ++K G+ + N++++ +
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 198 XXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEIT 257
L ++ + + D+VT++ ++ G + +S AV L M V G PD +T
Sbjct: 155 VA-------LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 207
Query: 258 MVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD 317
+V+ G +L L + +E KI V + + +ID K VD A+NLF +MD
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267
Query: 318 SCTI----VSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVD 373
+ I +++S+I L +GR S+A L +M+E+ + P+ V+F ++ A +
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327
Query: 374 KGRSYFNSMEGNFGIVPKIEHYG------CMVDLLSRAGFVKEALDFVRTMPVEPNQIIW 427
+ F+ M I P I Y CM D L A ++ + + P+ + +
Sbjct: 328 EAEKLFDEMIQR-SIDPNIVTYNSLINGFCMHDRLDEA---QQIFTLMVSKDCLPDVVTY 383
Query: 428 RSIITA-CHAR 437
++I C A+
Sbjct: 384 NTLINGFCKAK 394
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 125/275 (45%), Gaps = 11/275 (4%)
Query: 221 VTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESY 280
VT++++I +A+ G A LF EM + P+ +T S++ L+ + + +
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 281 IEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDS----CTIVSWTSVIVGLAMHGR 336
+ K V N LI+ F K V M LFR M V++T++I G
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 337 GSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYG 396
A +F +MV GV P+ +++ +L C + ++K F ++ + + P I Y
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS-KMEPDIYTYN 489
Query: 397 CMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRSIITACHARGELKLGESISKELLRN 453
M + + +AG V++ D ++ V+P+ I + ++I+ +G + ++ ++ +
Sbjct: 490 IMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549
Query: 454 EPTHES-NYVLLSNIYAKLRRWEQKTKVREMMDMR 487
P +S Y L I A LR ++ + +MR
Sbjct: 550 GPLPDSGTYNTL--IRAHLRDGDKAASAELIKEMR 582
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 120/272 (44%), Gaps = 11/272 (4%)
Query: 222 TWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTA-CADLGALELGKWLESY 280
T++ MI RR S A+ + +M +G P +T+ S+L C E ++
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 281 IEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM--DSCT--IVSWTSVIVGLAMHGR 336
+E P +V + +F +A+ L +M C +V++ +VI GL G
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQH-NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 337 GSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYG 396
A++L ++M + +E D V + V+ + C + VD + F M+ N GI P + Y
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD-NKGIRPDVFTYS 279
Query: 397 CMVDLLSRAGFVKEALDFVRTM---PVEPNQIIWRSIITACHARGELKLGESISKELL-R 452
++ L G +A + M + PN + + S+I A G+L E + E++ R
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 453 NEPTHESNYVLLSNIYAKLRRWEQKTKVREMM 484
+ + Y L N + R ++ ++ +M
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 128/303 (42%), Gaps = 28/303 (9%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
FN+LI AFA + + +L+ M++ + PN TY ++ L + + +
Sbjct: 313 FNSLIDAFAKEGKLIEAE-KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKT----DSVTWSA 225
V D+ NT+I+ + ++F + + ++VT++
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGM-----------ELFRDMSRRGLVGNTVTYTT 420
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
+I G+ + A +F++M GV P+ +T ++L G LE + Y++ K
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMD----SCTIVSWTSVIVGLAMHGRGSEAV 341
+ + N + + K G V+ +LF + ++++ ++I G G EA
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 342 SLFDEMVEQGVEPDDVSFIGVLSA-------CCHSKLVDKGRS-YFNSMEGNFGIVPKIE 393
+LF +M E G PD ++ ++ A ++L+ + RS F +G+V +
Sbjct: 541 TLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600
Query: 394 HYG 396
H G
Sbjct: 601 HDG 603
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/321 (18%), Positives = 134/321 (41%), Gaps = 21/321 (6%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D F +++LI + + S +L ML + PN T+ ++ A A L + +
Sbjct: 274 DVFTYSSLISCLCNYGRW-SDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVF----DESPKTDSV 221
+++ D ++ N++I+ + A ++F + D V
Sbjct: 333 FDEMIQRSIDPNIVTYNSLINGFCMHDRLDE-----------AQQIFTLMVSKDCLPDVV 381
Query: 222 TWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYI 281
T++ +I G+ + + LFR+M G+ + +T +++ + + + +
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 282 EWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCT----IVSWTSVIVGLAMHGRG 337
+ ++ N L+D K G ++KAM +F + I ++ + G+ G+
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501
Query: 338 SEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGC 397
+ LF + +GV+PD +++ ++S C L ++ + F M+ + G +P Y
Sbjct: 502 EDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED-GPLPDSGTYNT 560
Query: 398 MVDLLSRAGFVKEALDFVRTM 418
++ R G + + ++ M
Sbjct: 561 LIRAHLRDGDKAASAELIKEM 581
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/424 (20%), Positives = 173/424 (40%), Gaps = 52/424 (12%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
FN L+ A A + + L M + + ++Y ++ S L L AV G +
Sbjct: 83 FNKLLSAIAKMNKFDLV-ISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKM 141
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
+K G++ D+ +++++ Y L ++F + ++VT++ +I G
Sbjct: 142 MKLGYEPDIVTLSSLLNGYCHGKRISEAVA-------LVDQMFVMEYQPNTVTFNTLIHG 194
Query: 230 YARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKS 289
+S AV L M G PD T +V+ G ++L L +E KI
Sbjct: 195 LFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD 254
Query: 290 VELCNALIDMFAKCGDVDKAMNLFRQMDS----CTIVSWTSVIVGLAMHGRGS------- 338
V + +ID +V+ A+NLF +MD+ +V++ S+I L +GR S
Sbjct: 255 VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 314
Query: 339 ----------------------------EAVSLFDEMVEQGVEPDDVSFIGVLSACCHSK 370
EA L+DEM+++ ++PD ++ +++ C
Sbjct: 315 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 371 LVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP---VEPNQIIW 427
+D+ + F M P + Y ++ +A V+E ++ R M + N + +
Sbjct: 375 RLDEAKHMFELMISK-DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 428 RSIITACHARGELKLGESISKELLRNE-PTHESNYVLLSNIYAKLRRWEQKTKVREMMDM 486
++I G+ + + I K+++ + P Y +L + K + E+ V E +
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Query: 487 RGMK 490
M+
Sbjct: 494 SKME 497
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 176/427 (41%), Gaps = 40/427 (9%)
Query: 110 FNTLIRA-FAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGS 168
FNTLI F H S++ + L M+ G P+ FTY V+ D+ L ++
Sbjct: 188 FNTLIHGLFLHNKASEA--VALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK 245
Query: 169 VVKFGFDDDLHVQNTMIH----------------------------MYXXXXXXXXXXXX 200
+ K + D+ + T+I Y
Sbjct: 246 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 305
Query: 201 XXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVS 260
L + + + VT+SA+I + + G A L+ EM + PD T S
Sbjct: 306 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 365
Query: 261 VLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDS-- 318
++ L+ K + + K +V N LI F K V++ M LFR+M
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425
Query: 319 --CTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGR 376
V++ ++I GL G A +F +MV GV PD +++ +L C ++K
Sbjct: 426 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485
Query: 377 SYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRSIITA 433
F ++ + + P I Y M++ + +AG V++ D ++ V+PN II+ ++I+
Sbjct: 486 VVFEYLQKS-KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISG 544
Query: 434 CHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVP 493
+G + +++ +E ++ + T ++ + I A+LR ++ + +MR V
Sbjct: 545 FCRKGLKEEADALFRE-MKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVG 603
Query: 494 GSTMIEL 500
++ I +
Sbjct: 604 DASTISM 610
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 161/359 (44%), Gaps = 28/359 (7%)
Query: 91 LFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVL 150
LF + P S F+ FN L+ A A + + L M R G+ N +TY ++
Sbjct: 72 LFGGMVKSRPLPSIFE---FNKLLSAIAKMKKFDLV-ISLGEKMQRLGISHNLYTYNILI 127
Query: 151 KACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGK 210
S + L A+ G ++K G++ + +++++ Y L +
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA-------LVDQ 180
Query: 211 VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGA 270
+ + + D++T++ +I G +S AV L M G P+ +T V+ G
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 271 LELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDS----CTIVSWTS 326
++L L + +E KI +V + + +ID K D A+NLF +M++ +++++S
Sbjct: 241 IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 300
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACC-HSKLVDKGRSYFNSMEGN 385
+I L + R S+A L +M+E+ + P+ V+F ++ A KLV+ + Y ++ +
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 386 FGIVPKIEHYG------CMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRSIITA-CHAR 437
I P I Y CM D L A K + + + PN + + ++I C A+
Sbjct: 361 --IDPDIFTYSSLINGFCMHDRLDEA---KHMFELMISKDCFPNVVTYNTLINGFCKAK 414
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 161/390 (41%), Gaps = 39/390 (10%)
Query: 106 DAFLFNTLIRA-FAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLG-- 162
D F TLI F H S++ + L M++ G PN TY V+ D+ L
Sbjct: 189 DTITFTTLIHGLFLHNKASEA--VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 163 -----------------KAVHGSVVKFGFDDD-LHVQNTM--------IHMYXXXXXXXX 196
V S+ K+ +DD L++ M + Y
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 197 XXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEI 256
L + + + VT++A+I + + G A L+ EM + PD
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366
Query: 257 TMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM 316
T S++ L+ K + + K +V N LI+ F K +D+ + LFR+M
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Query: 317 DS----CTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLV 372
V++T++I G A +F +MV GV P+ +++ +L C + +
Sbjct: 427 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 486
Query: 373 DKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRS 429
+K F ++ + + P I Y M++ + +AG V++ D ++ V+P+ II+ +
Sbjct: 487 EKAMVVFEYLQRS-KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNT 545
Query: 430 IITACHARGELKLGESISKELLRNEPTHES 459
+I+ +G + +++ +++ + P +S
Sbjct: 546 MISGFCRKGLKEEADALFRKMREDGPLPDS 575
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 156/381 (40%), Gaps = 24/381 (6%)
Query: 91 LFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVL 150
LF + P + D FN L A A T Q L + M G+ + +T ++
Sbjct: 57 LFESMIQSRPLPTPID---FNRLCSAVARTKQYDLV-LGFCKGMELNGIEHDMYTMTIMI 112
Query: 151 KACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGK 210
L +V G K G++ D +T+++ + L +
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVA-------LVDR 165
Query: 211 VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGA 270
+ + + D VT S +I G +G S A+ L M G PDE+T VL G
Sbjct: 166 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225
Query: 271 LELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD----SCTIVSWTS 326
L L +E + I SV + +ID K G D A++LF +M+ +V+++S
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 285
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNF 386
+I GL G+ + + EM+ + + PD V+F ++ + + + +N M
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR- 344
Query: 387 GIVPKIEHYGCMVDLLSRAGFVKEA---LDFVRTMPVEPNQIIWRSIITA-CHAR----G 438
GI P Y ++D + + EA D + + EP+ + + +I + C A+ G
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404
Query: 439 ELKLGESISKELLRNEPTHES 459
E SK L+ N T+ +
Sbjct: 405 MRLFREISSKGLIPNTITYNT 425
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 128/302 (42%), Gaps = 21/302 (6%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +++LI + + G ++ R M+ ++P+ T+ ++ L K +
Sbjct: 279 DVVTYSSLIGGLCNDGKW-DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFD----ESPKTDSV 221
+ ++ G D N++I + A ++FD + + D V
Sbjct: 338 YNEMITRGIAPDTITYNSLIDGFCKENCLHE-----------ANQMFDLMVSKGCEPDIV 386
Query: 222 TWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYI 281
T+S +I Y + + LFRE+ G+ P+ IT +++ G L K L +
Sbjct: 387 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Query: 282 EWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD----SCTIVSWTSVIVGLAMHGRG 337
+ +P SV L+D G+++KA+ +F +M + I + +I G+ +
Sbjct: 447 VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKV 506
Query: 338 SEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGC 397
+A SLF + ++GV+PD V++ ++ C + + F M+ + G P Y
Sbjct: 507 DDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED-GCTPDDFTYNI 565
Query: 398 MV 399
++
Sbjct: 566 LI 567
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 162/405 (40%), Gaps = 52/405 (12%)
Query: 91 LFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVL 150
LF + + P S D F+ A A T Q L + + G+ N +T ++
Sbjct: 75 LFQEMIRSRPLPSLVD---FSRFFSAIARTKQFNLV-LDFCKQLELNGIAHNIYTLNIMI 130
Query: 151 KACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIH------------------------ 186
+V G V+K G++ D NT+I
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 187 ----MYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGL 242
Y L K+ + + K D T+S +I R G A+ L
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 243 FREMQVMGVCPDEITMVSVLTACADLGALELGKW------LESYIEWKKIPKSVELCNAL 296
F+EM+ G+ +T S++ G + GKW L+ + + +P + N L
Sbjct: 251 FKEMETKGIKSSVVTYNSLVR-----GLCKAGKWNDGALLLKDMVSREIVPNVITF-NVL 304
Query: 297 IDMFAKCGDVDKAMNLFRQM----DSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGV 352
+D+F K G + +A L+++M S I+++ +++ G M R SEA ++ D MV
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 353 EPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEAL 412
PD V+F ++ C K VD G F ++ G+V Y +V ++G +K A
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR-GLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 413 DFVRTM---PVEPNQIIWRSIITACHARGELKLGESISKELLRNE 454
+ + M V P+ + + ++ G+L+ I ++L +++
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 130/315 (41%), Gaps = 15/315 (4%)
Query: 124 KSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNT 183
K + L++ M+R +P+ + A A L + G +++ N
Sbjct: 69 KDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128
Query: 184 MIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLF 243
MI+ + + GKV + D+ T++ +I G G S AV L
Sbjct: 129 MINCFCRCCKTCFAYS-------VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181
Query: 244 REMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKC 303
M G PD +T S++ G L L +E + + V + +ID +
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241
Query: 304 GDVDKAMNLFRQMDS----CTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSF 359
G +D A++LF++M++ ++V++ S++ GL G+ ++ L +MV + + P+ ++F
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF 301
Query: 360 IGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVD---LLSRAGFVKEALDFVR 416
+L + + + M GI P I Y ++D + +R LD +
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITR-GISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 417 TMPVEPNQIIWRSII 431
P+ + + S+I
Sbjct: 361 RNKCSPDIVTFTSLI 375
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 118/271 (43%), Gaps = 26/271 (9%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
+ FN L+ F + + + +LY+ M+ G+ PN TY ++ + L +
Sbjct: 297 NVITFNVLLDVFVKEGKLQEAN-ELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPK----TDSV 221
+V+ D+ ++I Y KVF K ++V
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDD-----------GMKVFRNISKRGLVANAV 404
Query: 222 TWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESY- 280
T+S ++ G+ + G A LF+EM GV PD +T +L D G LE K LE +
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE--KALEIFE 462
Query: 281 -IEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSC-----TIVSWTSVIVGLAMH 334
++ K+ + + +I+ K G V+ A NLF + C ++++T +I GL
Sbjct: 463 DLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL-PCKGVKPNVMTYTVMISGLCKK 521
Query: 335 GRGSEAVSLFDEMVEQGVEPDDVSFIGVLSA 365
G SEA L +M E G P+D ++ ++ A
Sbjct: 522 GSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/335 (19%), Positives = 135/335 (40%), Gaps = 31/335 (9%)
Query: 91 LFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVL 150
LF + T ++S +N+L+R + L L + M+ +VPN T+ +L
Sbjct: 250 LFKEMETKGIKSS---VVTYNSLVRGLCKAGKWNDGAL-LLKDMVSREIVPNVITFNVLL 305
Query: 151 KACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGK 210
L+ ++ ++ G ++ NT++ Y A
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE-----------ANN 354
Query: 211 VFDESPKT----DSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACA 266
+ D + D VT++++I GY + +FR + G+ + +T ++
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 267 DLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCT----IV 322
G ++L + L + + V L+D G ++KA+ +F + IV
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 323 SWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM 382
+T++I G+ G+ +A +LF + +GV+P+ +++ ++S C + + M
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Query: 383 EGNFGIVPKIEHYGCMV-------DLLSRAGFVKE 410
E + G P Y ++ DL + A ++E
Sbjct: 535 EED-GNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 119/259 (45%), Gaps = 10/259 (3%)
Query: 207 LAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTA-C 265
L K+ + K V ++A+I + GH A LF EM G+ PD IT ++ + C
Sbjct: 63 LLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122
Query: 266 ADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDS----CTI 321
+ + L IE + P V +ALI+ K G V +A ++ M T
Sbjct: 123 RSGRWTDAEQLLRDMIERQINPDVVTF-SALINALVKEGKVSEAEEIYGDMLRRGIFPTT 181
Query: 322 VSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNS 381
+++ S+I G R ++A + D M + PD V+F +++ C +K VD G F
Sbjct: 182 ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 241
Query: 382 MEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTM---PVEPNQIIWRSIITACHARG 438
M GIV Y ++ + G + A D + M V PN I ++S++ + ++
Sbjct: 242 MHRR-GIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKK 300
Query: 439 ELKLGESISKELLRNEPTH 457
EL+ +I ++L ++E H
Sbjct: 301 ELRKAFAILEDLQKSEGHH 319
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 13/229 (5%)
Query: 217 KTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKW 276
+ D VT++ ++ G G +A+ L M G P +++ +G E
Sbjct: 7 RPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALN 62
Query: 277 LESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTI----VSWTSVIVGLA 332
L S +E I V + NA+ID K G A NLF +M I ++++ +I
Sbjct: 63 LLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122
Query: 333 MHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKI 392
GR ++A L +M+E+ + PD V+F +++A V + + M GI P
Sbjct: 123 RSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR-GIFPTT 181
Query: 393 EHYGCMVDLL---SRAGFVKEALDFVRTMPVEPNQIIWRSIITA-CHAR 437
Y M+D R K LD + + P+ + + ++I C A+
Sbjct: 182 ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAK 230
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 126/292 (43%), Gaps = 11/292 (3%)
Query: 207 LAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACA 266
L ++ + D VT++ ++ G +R A LF EM + PD T+ ++
Sbjct: 432 LRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHC 491
Query: 267 DLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTI----V 322
LG L+ L ++ K+I V N L+D F K GD+D A ++ M S I +
Sbjct: 492 KLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI 551
Query: 323 SWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM 382
S++ ++ L G +EA ++DEM+ + ++P + ++ C S G S+ M
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Query: 383 EGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMPVE-----PNQIIWRSIITACHAR 437
G VP Y ++ R + +A V+ M E P+ + SI+ +
Sbjct: 612 ISE-GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQ 670
Query: 438 GELKLGESISKELL-RNEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRG 488
++K E + ++++ R S Y + N + + ++ + M RG
Sbjct: 671 NQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 116/237 (48%), Gaps = 10/237 (4%)
Query: 224 SAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALE-LGKWLESYIE 282
+A+IG R G A G+++E+ GV + T+ ++ A G +E +G +L S ++
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFL-SQVQ 262
Query: 283 WKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD----SCTIVSWTSVIVGLAMHGRGS 338
K + + N LI ++ G +++A L M S + ++ +VI GL HG+
Sbjct: 263 EKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322
Query: 339 EAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCM 398
A +F EM+ G+ PD ++ +L C V + F+ M +VP + + M
Sbjct: 323 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR-DVVPDLVCFSSM 381
Query: 399 VDLLSRAGFVKEALDF---VRTMPVEPNQIIWRSIITACHARGELKLGESISKELLR 452
+ L +R+G + +AL + V+ + P+ +I+ +I +G + + ++ E+L+
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQ 438
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 154/363 (42%), Gaps = 25/363 (6%)
Query: 130 LYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYX 189
+Y+ + R GV N +T ++ A + V + G D+ NT+I Y
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281
Query: 190 XXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVM 249
+ GK F SP T++ +I G + G RA +F EM
Sbjct: 282 SKGLMEEAFELMNA---MPGKGF--SPGV--YTYNTVINGLCKHGKYERAKEVFAEMLRS 334
Query: 250 GVCPDEITMVSVLT-ACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDK 308
G+ PD T S+L AC +E K +P V ++++ +F + G++DK
Sbjct: 335 GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCF-SSMMSLFTRSGNLDK 393
Query: 309 AMNLFRQMDSCTIVS----WTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLS 364
A+ F + ++ +T +I G G S A++L +EM++QG D V++ +L
Sbjct: 394 ALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILH 453
Query: 365 ACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP---VE 421
C K++ + FN M + P ++D + G ++ A++ + M +
Sbjct: 454 GLCKRKMLGEADKLFNEMTER-ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Query: 422 PNQIIWRSIITACHARGELKLGESISKELLRNE--PTHESNYVLLSNIYAK------LRR 473
+ + + +++ G++ + I +++ E PT S +L++ + +K R
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRV 572
Query: 474 WEQ 476
W++
Sbjct: 573 WDE 575
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 116/259 (44%), Gaps = 27/259 (10%)
Query: 217 KTDSVTWSAMIGGYARRGHSSRAVG-LFREMQVMGVCPDEI--TMVSVLTACADLGALEL 273
K S++ SAMI R G S A L R ++ GV EI ++ S + C ++
Sbjct: 110 KHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSV-F 168
Query: 274 GKWLESYIEWKKIPK---------------SVELCNALIDMFAKCGDVDKAMNLFRQMD- 317
+ +Y++ +K+ + S++ CNALI + G V+ A +++++
Sbjct: 169 DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISR 228
Query: 318 ---SCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDK 374
+ + ++ L G+ + + ++ E+GV PD V++ ++SA L+++
Sbjct: 229 SGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEE 288
Query: 375 GRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTM---PVEPNQIIWRSII 431
N+M G G P + Y +++ L + G + A + M + P+ +RS++
Sbjct: 289 AFELMNAMPGK-GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 432 TACHARGELKLGESISKEL 450
+G++ E + ++
Sbjct: 348 MEACKKGDVVETEKVFSDM 366
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 152/350 (43%), Gaps = 26/350 (7%)
Query: 104 SFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGK 163
S + F++N LI + + + L L+ M + G+ PN TY ++ L
Sbjct: 364 SPNLFVYNALIDSLCKGRKFHEAEL-LFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 164 AVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTW 223
+ G +V G ++ N++I+ + ++ ++ + VT+
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGH-------CKFGDISAAEGFMAEMINKKLEPTVVTY 475
Query: 224 SAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGAL-ELGKWLESYIE 282
++++GGY +G ++A+ L+ EM G+ P T ++L+ G + + K E
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE 535
Query: 283 WKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIV----SWTSVIVGLAMHGRGS 338
W P V N +I+ + + GD+ KA ++M IV S+ +I GL + G+ S
Sbjct: 536 WNVKPNRVTY-NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQAS 594
Query: 339 EAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCM 398
EA D + + E +++ + G+L C +++ S M G+ + YG +
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQR-GVDLDLVCYGVL 653
Query: 399 VDLLSRA-------GFVKEALDFVRTMPVEPNQIIWRSIITACHARGELK 441
+D + G +KE D ++P+ +I+ S+I A G+ K
Sbjct: 654 IDGSLKHKDRKLFFGLLKEMHD----RGLKPDDVIYTSMIDAKSKTGDFK 699
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 141/367 (38%), Gaps = 52/367 (14%)
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIH 186
++L+ M+ G+ P+ + Y V+++ L DL K + + G D ++ N +I
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 187 MYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM 246
LAGK K D VT+ ++ G + + + EM
Sbjct: 271 ---GLCKKQKVWEAVGIKKDLAGK----DLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEM 323
Query: 247 QVMGVCPDEITMVSVLTACADLGALE--------------------LGKWLESYIEWKKI 286
+ P E + S++ G +E ++S + +K
Sbjct: 324 LCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKF 383
Query: 287 ----------------PKSVELCNALIDMFAKCGDVDKAMNLFRQMDSC----TIVSWTS 326
P V + LIDMF + G +D A++ +M ++ + S
Sbjct: 384 HEAELLFDRMGKIGLRPNDVTY-SILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNF 386
+I G G S A EM+ + +EP V++ ++ C ++K ++ M G
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK- 501
Query: 387 GIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRSIITACHARGELKLG 443
GI P I + ++ L RAG +++A+ M V+PN++ + +I G++
Sbjct: 502 GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 444 ESISKEL 450
KE+
Sbjct: 562 FEFLKEM 568
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 152/373 (40%), Gaps = 32/373 (8%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTY-PFVLKACAGLSDLRLGKAVHGS 168
+N +I + S + + M G+VP+ ++Y P + C G+A
Sbjct: 545 YNVMIEGYCE-EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCL------TGQASEAK 597
Query: 169 VVKFGFDDDLHVQNTMIH--MYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAM 226
V F D LH N ++ Y + ++ D V + +
Sbjct: 598 V----FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVL 653
Query: 227 IGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALE--LGKWLESYIEWK 284
I G + GL +EM G+ PD++ S++ A + G + G W + I
Sbjct: 654 IDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW-DLMINEG 712
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVG--LAMHGRG----S 338
+P V A+I+ K G V++A L +M + V V G L + +G
Sbjct: 713 CVPNEVTY-TAVINGLCKAGFVNEAEVLCSKMQPVSSVP-NQVTYGCFLDILTKGEVDMQ 770
Query: 339 EAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCM 398
+AV L + ++ +G+ + ++ ++ C +++ M G+ G+ P Y M
Sbjct: 771 KAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGD-GVSPDCITYTTM 828
Query: 399 VDLLSRAGFVKEALDFVRTMP---VEPNQIIWRSIITACHARGELKLGESISKELLRNE- 454
++ L R VK+A++ +M + P+++ + ++I C GE+ + E+LR
Sbjct: 829 INELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888
Query: 455 -PTHESNYVLLSN 466
P ++++ SN
Sbjct: 889 IPNNKTSRTTTSN 901
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 130/296 (43%), Gaps = 19/296 (6%)
Query: 207 LAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACA 266
L +V D + ++A+I + A LF M +G+ P+++T ++
Sbjct: 354 LVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFC 413
Query: 267 DLGALE-----LGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDS--- 318
G L+ LG+ +++ ++ P N+LI+ K GD+ A +M +
Sbjct: 414 RRGKLDTALSFLGEMVDTGLKLSVYPY-----NSLINGHCKFGDISAAEGFMAEMINKKL 468
Query: 319 -CTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRS 377
T+V++TS++ G G+ ++A+ L+ EM +G+ P +F +LS + L+
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 378 YFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRSIITAC 434
FN M + + P Y M++ G + +A +F++ M + P+ +R +I
Sbjct: 529 LFNEM-AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Query: 435 HARGELKLGESISKELLR-NEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGM 489
G+ + L + N +E Y L + + + + E+ V + M RG+
Sbjct: 588 CLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 163/398 (40%), Gaps = 70/398 (17%)
Query: 125 SSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTM 184
+ L+LY M G+ P+ +T+ +L + + G D
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSG----------------LFRAGLIRD------- 525
Query: 185 IHMYXXXXXXXXXXXXXXXXXXLAGKVFDE----SPKTDSVTWSAMIGGYARRGHSSRAV 240
A K+F+E + K + VT++ MI GY G S+A
Sbjct: 526 -----------------------AVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAF 562
Query: 241 GLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELC-NALIDM 299
+EM G+ PD + ++ G K + K + E+C L+
Sbjct: 563 EFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH-KGNCELNEICYTGLLHG 621
Query: 300 FAKCGDVDKAMNLFRQMDS----CTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPD 355
F + G +++A+++ ++M +V + +I G H L EM ++G++PD
Sbjct: 622 FCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPD 681
Query: 356 DVSFIGVLSACCHSKLVDKGRSY-FNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDF 414
DV + ++ A SK D ++ + N G VP Y +++ L +AGFV EA
Sbjct: 682 DVIYTSMIDA--KSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVL 739
Query: 415 VRTM-PVE--PNQIIWRSIITACHARGELKLGESIS--KELLRNEPTHESNYVLLSNIYA 469
M PV PNQ+ + + +GE+ + +++ +L+ + + Y +L +
Sbjct: 740 CSKMQPVSSVPNQVTYGCFLDIL-TKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFC 798
Query: 470 KLRRWEQKTKVREMMDMRGMKK--VPGSTMIELNNEMC 505
+ R E+ +++ M G+ + +TMI NE+C
Sbjct: 799 RQGRIEEASELITRMIGDGVSPDCITYTTMI---NELC 833
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 153/352 (43%), Gaps = 50/352 (14%)
Query: 108 FLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHG 167
+ F+ LI A+ + + + + ++ +M YG+ PN TY V+ AC G
Sbjct: 269 YAFSALISAYGRSGLHEEA-ISVFNSMKEYGLRPNLVTYNAVIDACGK------GGMEFK 321
Query: 168 SVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMI 227
V KF FD+ +Q + + D +T+++++
Sbjct: 322 QVAKF-FDE---MQRNGV-------------------------------QPDRITFNSLL 346
Query: 228 GGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIP 287
+R G A LF EM + D + ++L A G ++L + + + K+I
Sbjct: 347 AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIM 406
Query: 288 KSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTI----VSWTSVIVGLAMHGRGSEAVSL 343
+V + +ID FAK G D+A+NLF +M I VS+ +++ GR EA+ +
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 344 FDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLS 403
EM G++ D V++ +L D+ + F M+ ++P + Y ++D S
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH-VLPNLLTYSTLIDGYS 525
Query: 404 RAGFVKEALDFVR---TMPVEPNQIIWRSIITACHARGELKLGESISKELLR 452
+ G KEA++ R + + + +++ ++I A G + S+ E+ +
Sbjct: 526 KGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTK 577
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 112/243 (46%), Gaps = 27/243 (11%)
Query: 219 DSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLE 278
D V+++ ++ Y + G S A+ + REM +G+ D +T ++L G + K +
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 279 SYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSC----TIVSWTSVIVGLAMH 334
+ ++ + + ++ + LID ++K G +AM +FR+ S +V ++++I L +
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN 562
Query: 335 GRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNS------------- 381
G AVSL DEM ++G+ P+ V++ ++ A S +D+ Y N
Sbjct: 563 GLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSAL 622
Query: 382 --MEGN-----FGIVPKIEHYGCMVDL---LSRAGFVKEALDFVRTMPVEPNQIIWRSII 431
EGN FG + + D + + E + + ++PN + + +I+
Sbjct: 623 TETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAIL 682
Query: 432 TAC 434
AC
Sbjct: 683 NAC 685
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 111/246 (45%), Gaps = 18/246 (7%)
Query: 294 NALIDMFAKCGDVDKAMNLFRQMDSC----TIVSWTSVIVGLAMHGRGSEAVS-LFDEMV 348
+ALI + + G ++A+++F M +V++ +VI G + V+ FDEM
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 349 EQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFV 408
GV+PD ++F +L+ C L + R+ F+ M N I + Y ++D + + G +
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMT-NRRIEQDVFSYNTLLDAICKGGQM 390
Query: 409 KEALDFVRTMPVE---PNQIIWRSIITACHARGELKLGESISKEL-LRNEPTHESNYVLL 464
A + + MPV+ PN + + ++I G ++ E+ +Y L
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 465 SNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMV 524
+IY K+ R E+ + M G+KK ++ N + G +Y ++ ++
Sbjct: 451 LSIYTKVGRSEEALDILREMASVGIKK----DVVTYN----ALLGGYGKQGKYDEVKKVF 502
Query: 525 DEMGRE 530
EM RE
Sbjct: 503 TEMKRE 508
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 136/329 (41%), Gaps = 27/329 (8%)
Query: 101 RASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLR 160
R + D +N L+ + + ++ M G PN T+ +L++
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEA-IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326
Query: 161 LGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFD------- 213
+ + +++ GF + N +I+ L G+ D
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKG--------------LLGRAIDILEKMPQ 372
Query: 214 ESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALEL 273
+ +S++++ ++ G+ + RA+ M G PD +T ++LTA G +E
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 274 GKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTI----VSWTSVIV 329
+ + + K + N +ID AK G KA+ L +M + + ++++S++
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 330 GLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIV 389
GL+ G+ EA+ F E G+ P+ V+F ++ C S+ D+ + M N G
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMI-NRGCK 551
Query: 390 PKIEHYGCMVDLLSRAGFVKEALDFVRTM 418
P Y +++ L+ G KEAL+ + +
Sbjct: 552 PNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 109/238 (45%), Gaps = 10/238 (4%)
Query: 221 VTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTA-CADLGALELGKWLES 279
VT++ +I R+G RA+ + +M G P+ ++ +L C + ++LE
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 280 YIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDS--CT--IVSWTSVIVGLAMHG 335
+ P V N ++ K G V+ A+ + Q+ S C+ ++++ +VI GLA G
Sbjct: 405 MVSRGCYPDIVTY-NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Query: 336 RGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHY 395
+ +A+ L DEM + ++PD +++ ++ VD+ +F+ E GI P +
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE-RMGIRPNAVTF 522
Query: 396 GCMVDLLSRAGFVKEALDFVRTM---PVEPNQIIWRSIITACHARGELKLGESISKEL 450
++ L ++ A+DF+ M +PN+ + +I G K + EL
Sbjct: 523 NSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/254 (18%), Positives = 100/254 (39%), Gaps = 44/254 (17%)
Query: 219 DSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLE 278
D + + +I G+ R G + +A + ++ G PD IT +++ G E+ L
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAG--EINNAL- 192
Query: 279 SYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM--DSC--TIVSWTSVIVGLAMH 334
S ++ + V N ++ G + +AM + +M C ++++T +I
Sbjct: 193 SVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRD 252
Query: 335 GRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNF-------- 386
A+ L DEM ++G PD V++ +++ C +D+ + N M +
Sbjct: 253 SGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312
Query: 387 --------------------------GIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP- 419
G P + + +++ L R G + A+D + MP
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ 372
Query: 420 --VEPNQIIWRSII 431
+PN + + ++
Sbjct: 373 HGCQPNSLSYNPLL 386
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 115/242 (47%), Gaps = 8/242 (3%)
Query: 207 LAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACA 266
L K+ + + K D+V +S +I G + G A LF EM++ G D IT +++
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 267 DLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTI----V 322
+ G + G L + +KI +V + LID F K G + +A L ++M I +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 323 SWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM 382
++ S+I G R EA+ + D M+ +G +PD ++F +++ C + +D G F M
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Query: 383 EGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTM---PVEPNQIIWRSIITACHARGE 439
G++ Y +V ++G ++ A + M V P+ + ++ ++ GE
Sbjct: 430 SLR-GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Query: 440 LK 441
L+
Sbjct: 489 LE 490
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 162/406 (39%), Gaps = 21/406 (5%)
Query: 91 LFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVL 150
LF D + P + D FN L A A T Q + L L + M G+ + +T ++
Sbjct: 75 LFRDMIQSRPLPTVID---FNRLFSAIAKTKQYELV-LALCKQMESKGIAHSIYTLSIMI 130
Query: 151 KACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGK 210
L + G ++K G++ D + NT+++ L +
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLN-------GLCLECRVSEALELVDR 183
Query: 211 VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGA 270
+ + K +T + ++ G G S AV L M G P+E+T VL G
Sbjct: 184 MVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQ 243
Query: 271 LELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD----SCTIVSWTS 326
L L +E + I + +ID K G +D A NLF +M+ I+++ +
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 327 VIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNF 386
+I G GR + L +M+++ + P+ V+F ++ + + + M
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR- 362
Query: 387 GIVPKIEHYGCMVDLLSRAGFVKEALDFVRTM---PVEPNQIIWRSIITACHARGELKLG 443
GI P Y ++D + ++EA+ V M +P+ + + +I + G
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG 422
Query: 444 ESISKEL-LRNEPTHESNYVLLSNIYAKLRRWEQKTKV-REMMDMR 487
+ +E+ LR + Y L + + + E K+ +EM+ R
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 221 VTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESY 280
VT+S +I + + G A L +EM G+ P+ IT S++ LE +
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 281 IEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD----SCTIVSWTSVIVGLAMHGR 336
+ K + N LI+ + K +D + LFR+M V++ +++ G G+
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 337 GSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYF-----NSMEGNFGIVPK 391
A LF EMV + V PD VS+ +L C + ++K F + ME + GI
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMI 513
Query: 392 IEHYGCMVDLLSRAGFVKEALDFVRTMPVEPNQIIWRS 429
I H C A V +A D ++P++ ++ R+
Sbjct: 514 IIHGMC------NASKVDDAWDLFCSLPLKGVKLDARA 545
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 118/281 (41%), Gaps = 12/281 (4%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D +NTLI F + + G +L R M++ + PN T+ ++ + LR +
Sbjct: 297 DIITYNTLIGGFCNAGRW-DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQL 355
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
+++ G + N++I + + + + D +T++
Sbjct: 356 LKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQ-------MVDLMISKGCDPDIMTFNI 408
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
+I GY + + LFREM + GV + +T +++ G LE+ K L + ++
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCT----IVSWTSVIVGLAMHGRGSEAV 341
+ + L+D G+++KA+ +F +++ I + +I G+ + +A
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAW 528
Query: 342 SLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM 382
LF + +GV+ D ++ ++S C + K F M
Sbjct: 529 DLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKM 569
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 133/328 (40%), Gaps = 27/328 (8%)
Query: 101 RASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLR 160
R S + F+ LI +F + + + QL + M++ G+ PN TY ++ + L
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREAD-QLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 161 LGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDS 220
+ ++ G D D+ N +I+ Y L G + ++
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS-LRGVI------ANT 438
Query: 221 VTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESY 280
VT++ ++ G+ + G A LF+EM V PD ++ +L D G LE +
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498
Query: 281 IEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD----SCTIVSWTSVIVGLAMHGR 336
IE K+ + + +I VD A +LF + ++ +I L
Sbjct: 499 IEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDS 558
Query: 337 GSEAVSLFDEMVEQGVEPDDVSF-------IGVLSACCHSKLVDKGRSYFNSMEGNFGIV 389
S+A LF +M E+G PD++++ +G A ++L+++ +S G
Sbjct: 559 LSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSS--------GFP 610
Query: 390 PKIEHYGCMVDLLSRAGFVKEALDFVRT 417
+ ++++LS K LD + T
Sbjct: 611 ADVSTVKMVINMLSSGELDKSFLDMLST 638
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 117/276 (42%), Gaps = 11/276 (3%)
Query: 222 TWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTA-CADLGALELGKWLESY 280
T S MI + R S A ++ +G PD + ++L C + E + ++
Sbjct: 125 TLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRM 184
Query: 281 IEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTI----VSWTSVIVGLAMHGR 336
+E P + L N L++ G V A+ L +M V++ V+ + G+
Sbjct: 185 VEMGHKPTLITL-NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQ 243
Query: 337 GSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYG 396
+ A+ L +M E+ ++ D V + ++ C +D + FN ME G I Y
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK-GFKADIITYN 302
Query: 397 CMVDLLSRAGFVKEALDFVRTM---PVEPNQIIWRSIITACHARGELKLGESISKELL-R 452
++ AG + +R M + PN + + +I + G+L+ + + KE++ R
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362
Query: 453 NEPTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRG 488
+ Y L + + K R E+ ++ ++M +G
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 134/324 (41%), Gaps = 15/324 (4%)
Query: 138 GVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXX 197
GV + +T ++ S L + G ++K GF+ D+ ++I+ +
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 198 XXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEIT 257
+ ++ + K D V ++ +I + GH + A+ LF +M+ G+ PD +
Sbjct: 162 MS-------MVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVM 214
Query: 258 MVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD 317
S++ + G L + +KI V NALID F K G A L+ +M
Sbjct: 215 YTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI 274
Query: 318 SCTIV----SWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVD 373
+I ++TS+I G M G EA +F M +G PD V++ +++ C K VD
Sbjct: 275 RMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVD 334
Query: 374 KGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAG---FVKEALDFVRTMPVEPNQIIWRSI 430
F M G+ Y ++ + G +E + + V PN + +
Sbjct: 335 DAMKIFYEMSQK-GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVL 393
Query: 431 ITACHARGELKLGESISKELLRNE 454
+ G++K I +++ + E
Sbjct: 394 LHCLCYNGKVKKALMIFEDMQKRE 417
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 21/262 (8%)
Query: 208 AGKVFDESPKTDSVTWSAMIGGY---ARRG-HS---SRAVGLFREMQVMGVCPDEITMVS 260
+GK S D W Y R G HS + A+ LF M P I
Sbjct: 18 SGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTK 77
Query: 261 VLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGD-------VDKAMNLF 313
+L A + ++ L +++ + + CN L++ F + + K M L
Sbjct: 78 LLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLG 137
Query: 314 RQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVD 373
+ D IV++TS+I G + R EA+S+ ++MVE G++PD V + ++ + C + V+
Sbjct: 138 FEPD---IVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 374 KGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTM---PVEPNQIIWRSI 430
S F+ ME N+GI P + Y +V+ L +G ++A +R M ++P+ I + ++
Sbjct: 195 YALSLFDQME-NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNAL 253
Query: 431 ITACHARGELKLGESISKELLR 452
I A G+ E + E++R
Sbjct: 254 IDAFVKEGKFLDAEELYNEMIR 275
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 126/292 (43%), Gaps = 29/292 (9%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D FN LI AF + + +LY M+R + PN FTY ++ + + +
Sbjct: 246 DVITFNALIDAFVKEGKFLDAE-ELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKT----DSV 221
+ G D+ ++I+ + A K+F E + +++
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDD-----------AMKIFYEMSQKGLTGNTI 353
Query: 222 TWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYI 281
T++ +I G+ + G + A +F M GV P I +VL C ++ K L +
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGV-PPNIRTYNVLLHCLCYNG-KVKKALMIFE 411
Query: 282 EWKK-----IPKSVELCNALIDMFAKCGDVDKAMNLF-----RQMDSCTIVSWTSVIVGL 331
+ +K + ++ N L+ G ++KA+ +F R+MD I+++T +I G+
Sbjct: 412 DMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDI-GIITYTIIIQGM 470
Query: 332 AMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSME 383
G+ AV+LF + +GV+P+ V++ ++S L + F M+
Sbjct: 471 CKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 173/424 (40%), Gaps = 32/424 (7%)
Query: 128 LQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHM 187
+ L+ M G+ P T V+ S G ++K GF+ DL ++++
Sbjct: 103 ISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNG 162
Query: 188 YXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQ 247
Y L ++ K + VT++ +I + H + AV LF +M
Sbjct: 163 YCHWNRIEDAIA-------LFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMG 215
Query: 248 VMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVD 307
G P+ +T +++T ++G WL + ++I +V ALID F K G +
Sbjct: 216 TNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLM 275
Query: 308 KAMNLFRQMDSCT----IVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVL 363
+A L+ M + + ++ S+I GL M+G EA +F M G P++V + ++
Sbjct: 276 EAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLI 335
Query: 364 SACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVD---LLSRAGFVKEALDFVRTMPV 420
C SK V+ G F M G+V Y ++ L+ R +E + + +
Sbjct: 336 HGFCKSKRVEDGMKIFYEMSQK-GVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRA 394
Query: 421 EPNQIIWRSIITACHARGELKLGESISKELLRNE-PTHESNYVLLSNIYAKLRRWEQKTK 479
P+ + ++ G+++ I + + + E + Y ++ KL + E
Sbjct: 395 PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFD 454
Query: 480 VREMMDMRGMKK--VPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGREIKRAGYV 537
+ + +GMK + +TMI + C + + D + +++K G++
Sbjct: 455 LFCSLFSKGMKPNVITYTTMI---SGFCR-----------RGLIHEADSLFKKMKEDGFL 500
Query: 538 PTTS 541
P S
Sbjct: 501 PNES 504
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/268 (19%), Positives = 113/268 (42%), Gaps = 45/268 (16%)
Query: 207 LAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACA 266
L ++ P + ++ ++ A+ + LF +MQ++G+ P + +++ C
Sbjct: 70 LFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGI-PPLLCTCNIVMHCV 128
Query: 267 DLGA------------LELG---------KWLESYIEWKKIPKSVELCNALIDM------ 299
L + ++LG L Y W +I ++ L + ++ M
Sbjct: 129 CLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNV 188
Query: 300 ---------FAKCGDVDKAMNLFRQMDSC----TIVSWTSVIVGLAMHGRGSEAVSLFDE 346
K ++ A+ LF QM + +V++ +++ GL GR +A L +
Sbjct: 189 VTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRD 248
Query: 347 MVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAG 406
M+++ +EP+ ++F ++ A + + + +N M + P + YG +++ L G
Sbjct: 249 MMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI-QMSVYPDVFTYGSLINGLCMYG 307
Query: 407 FVKEALDFVRTMP---VEPNQIIWRSII 431
+ EA M PN++I+ ++I
Sbjct: 308 LLDEARQMFYLMERNGCYPNEVIYTTLI 335
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 168/403 (41%), Gaps = 52/403 (12%)
Query: 130 LYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYX 189
+Y TM+ +G++P T+ +L +C DL + + + + N +I+ +
Sbjct: 225 VYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFS 284
Query: 190 XXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVM 249
G + +++ +I GY ++G A G+ EM
Sbjct: 285 KNGKMEEARR-------FHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNA 337
Query: 250 GVCPDEITMVSVLTACADLGALE--------------------------LGKWLESYIEW 283
G+ P T + A D G ++ +GK++E+ + +
Sbjct: 338 GIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLF 397
Query: 284 KK-----IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTI----VSWTSVIVGLAMH 334
I S+ N LID + G+++ A L +M + I +++T+++ G +
Sbjct: 398 DDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKN 457
Query: 335 GRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSY--FNSMEGNFGIVPKI 392
G S A ++DEM+ +G++PD ++ A +L D +++ M P +
Sbjct: 458 GNLSMATEVYDEMLRKGIKPDGYAY--TTRAVGELRLGDSDKAFRLHEEMVATDHHAPDL 515
Query: 393 EHYGCMVDLLSRAGFVKEALDFVRTM---PVEPNQIIWRSIITACHARGELKLGESISKE 449
Y +D L + G + +A++F R + + P+ + + ++I G+ K+ ++ E
Sbjct: 516 TIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDE 575
Query: 450 LLRNE--PTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMK 490
+LR P+ + +VL+ +AK R EQ + M RG++
Sbjct: 576 MLRKRLYPSVITYFVLIYG-HAKAGRLEQAFQYSTEMKKRGVR 617
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 106/259 (40%), Gaps = 21/259 (8%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKA- 164
D + TL++ F + S ++Y MLR G+ P+ + Y + +LRLG +
Sbjct: 443 DVITYTTLVKGFVKN-GNLSMATEVYDEMLRKGIKPDGYAY-----TTRAVGELRLGDSD 496
Query: 165 ----VHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDS 220
+H +V D H + I Y K+F D
Sbjct: 497 KAFRLHEEMVA----TDHHAPDLTI--YNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDH 550
Query: 221 VTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESY 280
VT++ +I GY G A L+ EM + P IT ++ A G LE +
Sbjct: 551 VTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTE 610
Query: 281 IEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTI----VSWTSVIVGLAMHGR 336
++ + + +V NAL+ K G++D+A +M+ I S+T +I +
Sbjct: 611 MKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEK 670
Query: 337 GSEAVSLFDEMVEQGVEPD 355
E V L+ EM+++ +EPD
Sbjct: 671 WEEVVKLYKEMLDKEIEPD 689
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 100/223 (44%), Gaps = 16/223 (7%)
Query: 237 SRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGK--WLESYIEWKKIPKSVELCN 294
++A ++ M G+ P IT ++L +C G LE WLE ++ + I S N
Sbjct: 220 NKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLE--MKRRNIEFSEVTYN 277
Query: 295 ALIDMFAKCGDVDKAMNLFRQMD----SCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQ 350
LI+ F+K G +++A M + T S+ +I G G +A + DEM+
Sbjct: 278 ILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNA 337
Query: 351 GVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAG-FVK 409
G+ P ++ + A C +D R +SM P + Y ++ + G FV+
Sbjct: 338 GIYPTTSTYNIYICALCDFGRIDDARELLSSMAA-----PDVVSYNTLMHGYIKMGKFVE 392
Query: 410 EALDF--VRTMPVEPNQIIWRSIITACHARGELKLGESISKEL 450
+L F +R + P+ + + ++I G L+ + + +E+
Sbjct: 393 ASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEM 435
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 141/367 (38%), Gaps = 32/367 (8%)
Query: 134 MLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXX 193
ML G+ P TY + A + + + S+ D+ NT++H Y
Sbjct: 334 MLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGK 389
Query: 194 XXXXXXXXXXXXXLAGKVFDESPKTDS----VTWSAMIGGYARRGHSSRAVGLFREMQVM 249
A +FD+ D VT++ +I G G+ A L EM
Sbjct: 390 FVE-----------ASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQ 438
Query: 250 GVCPDEITMVSVLTACADLGALELGKWLESYIEWKKI-PKSVELCNALIDMFAKCGDVDK 308
+ PD IT +++ G L + + + K I P + + GD DK
Sbjct: 439 LIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGEL-RLGDSDK 497
Query: 309 AMNLFRQM-----DSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVL 363
A L +M + + + I GL G +A+ ++ G+ PD V++ V+
Sbjct: 498 AFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVI 557
Query: 364 SACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP---V 420
+ R+ ++ M + P + Y ++ ++AG +++A + M V
Sbjct: 558 RGYLENGQFKMARNLYDEMLRK-RLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGV 616
Query: 421 EPNQIIWRSIITA-CHARGELKLGESISKELLRNEPTHESNYVLLSNIYAKLRRWEQKTK 479
PN + +++ C A + + K P ++ +Y +L + +WE+ K
Sbjct: 617 RPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVK 676
Query: 480 V-REMMD 485
+ +EM+D
Sbjct: 677 LYKEMLD 683
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 146/338 (43%), Gaps = 18/338 (5%)
Query: 130 LYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYX 189
++ ML G+ PN FTY ++ D + V + F+ + + NT+I+
Sbjct: 506 IFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIIN--- 562
Query: 190 XXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVM 249
L + ++ +++++I G+ + G + AV +REM
Sbjct: 563 ---GLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSEN 619
Query: 250 GVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVEL--CNALIDMFAKCGDVD 307
G P+ +T S++ ++L LE E K + ++L ALID F K D+
Sbjct: 620 GKSPNVVTFTSLINGFCKSNRMDLA--LEMTHEMKSMELKLDLPAYGALIDGFCKKNDMK 677
Query: 308 KAMNLFRQMDSCTIVS----WTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVL 363
A LF ++ ++ + S+I G G+ A+ L+ +MV G+ D ++ ++
Sbjct: 678 TAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMI 737
Query: 364 SACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAG-FVKEA--LDFVRTMPV 420
++ ++ + + GIVP + +V+ LS+ G F+K + L+ ++ V
Sbjct: 738 DGLLKDGNINLASDLYSELL-DLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDV 796
Query: 421 EPNQIIWRSIITACHARGELKLGESISKELLRNEPTHE 458
PN +++ ++I H G L + E+L H+
Sbjct: 797 TPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHD 834
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 117/249 (46%), Gaps = 31/249 (12%)
Query: 221 VTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTA--CADLGALELGKWLE 278
+ ++++ GY + +A+ LF M+ G+ PD++ M SV+ C + +E+ K +E
Sbjct: 346 IAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKV-MFSVMVEWFCKN---MEMEKAIE 401
Query: 279 SYIEWKKI---PKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTS-------VI 328
Y+ K + P SV L + +I K + A+ +F + SW + +
Sbjct: 402 FYMRMKSVRIAPSSV-LVHTMIQGCLKAESPEAALEIFND----SFESWIAHGFMCNKIF 456
Query: 329 VGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGI 388
+ G+ A S M ++G+EP+ V + ++ A C K +D RS F+ M G+
Sbjct: 457 LLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEK-GL 515
Query: 389 VPKIEHYGCMVDLLSRAGFVKEALDFVRTMPV---EPNQIIWRSIITACHARGELKLGE- 444
P Y ++D + + A D + M E N++I+ +II G K+G+
Sbjct: 516 EPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIIN-----GLCKVGQT 570
Query: 445 SISKELLRN 453
S +KE+L+N
Sbjct: 571 SKAKEMLQN 579
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 127/297 (42%), Gaps = 51/297 (17%)
Query: 219 DSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITM-VSVLTACAD---LGALELG 274
D+VT ++ R AV +FR + G PD + ++V AC + AL+L
Sbjct: 238 DNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLL 297
Query: 275 KWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDS----CTIVSWTSVIVG 330
+ + + +P S E ++I F K G++++A+ + +M ++++ TS++ G
Sbjct: 298 REMRGKL---GVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNG 354
Query: 331 LAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVP 390
+A+ LF+ M E+G+ PD V F ++ C + ++K ++ M+ + I P
Sbjct: 355 YCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMK-SVRIAP 413
Query: 391 -------------KIEH-----------------YGCMVD----LLSRAGFVKEALDFVR 416
K E +G M + L + G V A F++
Sbjct: 414 SSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLK 473
Query: 417 TMP---VEPNQIIWRSIITACHARGELKLGESISKELLRN--EPTHESNYVLLSNIY 468
M +EPN + + +++ A + L SI E+L EP + + +L+ +
Sbjct: 474 MMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFF 530
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 22/259 (8%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+N++I F + S+ ++ YR M G PN T+ ++ + + L + +
Sbjct: 593 YNSIIDGFVKVGDTDSA-VETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM 651
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPK----TDSVTWSA 225
DL +I + A +F E P+ + +++
Sbjct: 652 KSMELKLDLPAYGALIDGFCKKNDMKT-----------AYTLFSELPELGLMPNVSVYNS 700
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLES-YIEWK 284
+I G+ G A+ L+++M G+ D T +++ G + L L S ++
Sbjct: 701 LISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLG 760
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD----SCTIVSWTSVIVGLAMHGRGSEA 340
+P + L L++ +K G KA + +M + ++ +++VI G G +EA
Sbjct: 761 IVPDEI-LHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEA 819
Query: 341 VSLFDEMVEQGVEPDDVSF 359
L DEM+E+G+ DD F
Sbjct: 820 FRLHDEMLEKGIVHDDTVF 838
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 10/239 (4%)
Query: 221 VTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESY 280
+T++A+IG AR +A+ L +M+ G D + V+ + ++ L Y
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 281 --IEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD----SCTIVSWTSVIVGLAMH 334
IE K+ V+L N +I FAK GD KA+ L S + S+I LA
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 317
Query: 335 GRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEH 394
GR EA +LF+E+ + G++P ++ +L + + S + ME G+ P
Sbjct: 318 GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR-GVSPDEHT 376
Query: 395 YGCMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRSIITACHARGELKLGESISKEL 450
Y ++D AG + A ++ M V+PN ++ ++ RGE + + KE+
Sbjct: 377 YSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM 435
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 127/316 (40%), Gaps = 50/316 (15%)
Query: 130 LYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYX 189
L+ + + G+ P Y +LK L+ +++ + K G D H + +I Y
Sbjct: 326 LFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYV 385
Query: 190 XXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVM 249
AG V + +S +S ++ G+ RG + + +EM+ +
Sbjct: 386 NAGRWESARIVLKEME--AGDV-----QPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI 438
Query: 250 GVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKA 309
GV PD + N +ID F K +D A
Sbjct: 439 GVKPDR-----------------------------------QFYNVVIDTFGKFNCLDHA 463
Query: 310 MNLFRQMDSCTI----VSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSA 365
M F +M S I V+W ++I HGR A +F+ M +G P ++ ++++
Sbjct: 464 MTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINS 523
Query: 366 CCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEA---LDFVRTMPVEP 422
+ D + M+ GI+P + + +VD+ ++G +A L+ ++++ ++P
Sbjct: 524 YGDQERWDDMKRLLGKMKSQ-GILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 582
Query: 423 NQIIWRSIITACHARG 438
+ ++ ++I A RG
Sbjct: 583 SSTMYNALINAYAQRG 598
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 119/274 (43%), Gaps = 13/274 (4%)
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
+I G+A+ G S+A+ L Q G+ T+VS+++A AD G + L +
Sbjct: 275 IIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSG 334
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIV----SWTSVIVGLAMHGRGSEAV 341
I NAL+ + K G + A ++ +M+ + +++ +I GR A
Sbjct: 335 IKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESAR 394
Query: 342 SLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDL 401
+ EM V+P+ F +L+ K M+ + G+ P + Y ++D
Sbjct: 395 IVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMK-SIGVKPDRQFYNVVIDT 453
Query: 402 LSRAGFVKEAL---DFVRTMPVEPNQIIWRSIITACHAR-GELKLGESISKELLRNE--P 455
+ + A+ D + + +EP+++ W ++I CH + G + E + + + R P
Sbjct: 454 FGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLID-CHCKHGRHIVAEEMFEAMERRGCLP 512
Query: 456 THESNYVLLSNIYAKLRRWEQKTKVREMMDMRGM 489
+ Y ++ N Y RW+ ++ M +G+
Sbjct: 513 C-ATTYNIMINSYGDQERWDDMKRLLGKMKSQGI 545
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 114/248 (45%), Gaps = 8/248 (3%)
Query: 217 KTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKW 276
K D V +A++ + G+ A LF EM G+ P+ +T ++ + G
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 277 LESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTI----VSWTSVIVGLA 332
L ++ K+I + +ALI+ F K V +A ++++M +I +++ S+I G
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 333 MHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKI 392
R +A + D M +G PD V+F +++ C +K VD G F M GIV
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR-GIVANT 185
Query: 393 EHYGCMVDLLSRAGFVKEALDFVRTM---PVEPNQIIWRSIITACHARGELKLGESISKE 449
Y ++ + G + A D + M V P+ I + ++ ++ EL+ +I ++
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
Query: 450 LLRNEPTH 457
L ++E H
Sbjct: 246 LQKSEDHH 253
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 9/160 (5%)
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQMDS----CTIVSWTSVIVGLAMHGRGSEAV 341
I V + A++D K G+ A NLF +M ++++ +I GR S+A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 342 SLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDL 401
L M+E+ + PD V+F +++A + V + + M + I P Y M+D
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEML-RWSIFPTTITYNSMIDG 124
Query: 402 LSRAGFVKEA---LDFVRTMPVEPNQIIWRSIITA-CHAR 437
+ V +A LD + + P+ + + ++I C A+
Sbjct: 125 FCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAK 164
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 114/225 (50%), Gaps = 15/225 (6%)
Query: 219 DSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTA-CADLGALELGKWL 277
D VT+ +I Y + G S A+ + REM G+ + IT+ ++L A C + E L
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLL 474
Query: 278 ESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSC----TIVSWTSVIVGLAM 333
S + I V LI F + V+KA+ ++ +M T+ ++ S+I GL
Sbjct: 475 NSAHKRGFIVDEVTY-GTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCH 533
Query: 334 HGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFN-SMEGNFGIVPKI 392
HG+ A+ FDE+ E G+ PDD +F ++ C V+K ++N S++ +F K
Sbjct: 534 HGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSF----KP 589
Query: 393 EHYGCMVDL--LSRAGFVKEALDFVRTM--PVEPNQIIWRSIITA 433
++Y C + L L + G ++AL+F T+ E + + + ++I+A
Sbjct: 590 DNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISA 634
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 123/296 (41%), Gaps = 29/296 (9%)
Query: 104 SFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGK 163
S D ++TLI+A+ S L++ R M + G+ N T +L A L
Sbjct: 413 SPDIVTYHTLIKAYLKV-GDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAH 471
Query: 164 AVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPK---TDS 220
+ S K GF D T+I + A +++DE K T +
Sbjct: 472 NLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEK-----------ALEMWDEMKKVKITPT 520
Query: 221 V-TWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLES 279
V T++++IGG G + A+ F E+ G+ PD+ T S++ G +E K E
Sbjct: 521 VSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVE--KAFEF 578
Query: 280 YIEWKK--IPKSVELCNALIDMFAKCGDVDKAMNLF------RQMDSCTIVSWTSVIVGL 331
Y E K CN L++ K G +KA+N F R++D+ V++ ++I
Sbjct: 579 YNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDT---VTYNTMISAF 635
Query: 332 AMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFG 387
+ EA L EM E+G+EPD ++ +S + + G FG
Sbjct: 636 CKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFG 691
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 156/378 (41%), Gaps = 39/378 (10%)
Query: 104 SFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGK 163
S + FN L+ + + + + L R + + V P+ TY +LKA + L K
Sbjct: 201 SLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLK 260
Query: 164 AVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKT----D 219
+ + K G + N +++ Y A ++ + +T D
Sbjct: 261 ELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKE-----------AFQIVELMKQTNVLPD 309
Query: 220 SVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLG-ALELGKWLE 278
T++ +I G G + L M+ + + PD +T +++ C +LG +LE K +E
Sbjct: 310 LCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLME 369
Query: 279 SY----IEWKKIPKSVE---LCNALIDMFAKCGDVDKAMNLFRQMD--SCTIVSWTSVIV 329
++ ++ ++ LC K V + + M S IV++ ++I
Sbjct: 370 QMENDGVKANQVTHNISLKWLCKE-----EKREAVTRKVKELVDMHGFSPDIVTYHTLIK 424
Query: 330 GLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIV 389
G S A+ + EM ++G++ + ++ +L A C + +D+ + NS IV
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIV 484
Query: 390 PKIEHYGCMVDLLSRAGFVKEAL---DFVRTMPVEPNQIIWRSIITAC--HARGEL---K 441
++ YG ++ R V++AL D ++ + + P + S+I H + EL K
Sbjct: 485 DEVT-YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK 543
Query: 442 LGESISKELLRNEPTHES 459
E LL ++ T S
Sbjct: 544 FDELAESGLLPDDSTFNS 561
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 139/299 (46%), Gaps = 16/299 (5%)
Query: 141 PNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXX 200
P+ ++ ++ L + + K+ +V+K G ++ N +I+
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILIN-------GLCLVGS 272
Query: 201 XXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVS 260
LA + + DSVT++ + G+ G S A + R+M G+ PD IT
Sbjct: 273 IAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTI 332
Query: 261 VLTACADLGALELG-KWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD-- 317
+L LG +++G L+ + S+ C+ ++ K G +D+A++LF QM
Sbjct: 333 LLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD 392
Query: 318 --SCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKG 375
S +V+++ VI GL G+ A+ L+DEM ++ + P+ + +L C ++ +
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 452
Query: 376 RSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTM---PVEPNQIIWRSII 431
RS +S+ + G I Y ++D +++G ++EAL+ + + + P+ + S+I
Sbjct: 453 RSLLDSLISS-GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 510
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 145/375 (38%), Gaps = 66/375 (17%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D+ +N L + F H S ++ R ML G+ P+ TY +L L ++ +G +
Sbjct: 291 DSVTYNILAKGF-HLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVL 349
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
++ GF+ N++I S
Sbjct: 350 LKDMLSRGFE-----LNSII------------------------------------PCSV 368
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
M+ G + G A+ LF +M+ G+ PD + V+ LG ++ WL + K+
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQM----DSCTIVSWTSVIVGLAMHGRGSEAV 341
I + AL+ + G + +A +L + ++ IV + VI G A G EA+
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 342 SLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDL 401
LF ++E G+ P +F ++ C ++ + + R + ++ +G+ P + Y ++D
Sbjct: 489 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK-LYGLAPSVVSYTTLMDA 547
Query: 402 LSRAGFVKEALDFVRTMPVE---PNQIIWRSIITACHARGELKLGESISKELLRNEPTHE 458
+ G K + R M E P + + I K L R
Sbjct: 548 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIF----------------KGLCRGWKHEN 591
Query: 459 SNYVLLSNIYAKLRR 473
N+VL I+ K ++
Sbjct: 592 CNHVLRERIFEKCKQ 606
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 106/252 (42%), Gaps = 20/252 (7%)
Query: 219 DSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLE 278
D V ++ +I GYA+ G A+ LF+ + G+ P T S++ + + +
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Query: 279 SYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTI----VSWTSVIVGLAMH 334
I+ + SV L+D +A CG+ L R+M + I V+++ + GL
Sbjct: 527 DVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRG 586
Query: 335 GRGSEAVSLFDE------------MVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM 382
+ + E M +G+ PD +++ ++ C K + + M
Sbjct: 587 WKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIM 646
Query: 383 EGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRSIITACHARGE 439
+ + Y ++D L G++++A F+ ++ V ++ + ++I A +G+
Sbjct: 647 KSR-NLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGD 705
Query: 440 LKLGESISKELL 451
++ + +LL
Sbjct: 706 PEMAVKLFHQLL 717
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 71/150 (47%), Gaps = 4/150 (2%)
Query: 305 DVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLS 364
+ DK ++++++ ++++V+ GL + +AV + + P VSF ++S
Sbjct: 171 ETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMS 230
Query: 365 ACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP---VE 421
C VD +S+F ++ G+VP + + +++ L G + EAL+ M VE
Sbjct: 231 GYCKLGFVDMAKSFFCTVL-KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVE 289
Query: 422 PNQIIWRSIITACHARGELKLGESISKELL 451
P+ + + + H G + + +++L
Sbjct: 290 PDSVTYNILAKGFHLLGMISGAWEVIRDML 319
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 148/349 (42%), Gaps = 32/349 (9%)
Query: 207 LAGKVFDESPKTDSVTWSAMIGGYAR----RGHSSRAVGLFREMQVMGVCPDEITMVSVL 262
LA K + E V + + R G +A + REM G PD T VL
Sbjct: 431 LAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVL 490
Query: 263 TACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDS--CT 320
+ +EL L ++ + V ++D F K G +++A F +M CT
Sbjct: 491 NYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCT 550
Query: 321 --IVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSY 378
+V++T++I + S A LF+ M+ +G P+ V++ ++ C + V+K
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 610
Query: 379 FNSMEGNFGIV---------------PKIEHYGCMVDLLSRAGFVKEALDFVRTMPV--- 420
F M G+ + P + YG ++D ++ V+EA + M +
Sbjct: 611 FERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 670
Query: 421 EPNQIIWRSIITACHARGELKLGESISKELLRNE-PTHESNYVLLSNIYAKLRRWEQKTK 479
EPNQI++ ++I G+L + + E+ + P Y L + Y K++R + +K
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 730
Query: 480 VREMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMG 528
V + M + + + + EM + + D+ ++ +M++E G
Sbjct: 731 V-----LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 139/356 (39%), Gaps = 32/356 (8%)
Query: 130 LYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYX 189
L+ M R G+V + +TY ++ + + + + + G ++ +IH Y
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAY- 563
Query: 190 XXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVM 249
L + E + VT+SA+I G+ + G +A +F M
Sbjct: 564 ------LKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGS 617
Query: 250 GVCPD-EITMVSVLTACADLGALELGKWLESYIEWKKIPK--------SVELC------- 293
PD ++ + G L+ + + ++ + S+E C
Sbjct: 618 KDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVY 677
Query: 294 NALIDMFAKCGDVDKAMNLFRQMDS----CTIVSWTSVIVGLAMHGRGSEAVSLFDEMVE 349
+ALID K G +D+A + +M T+ +++S+I R A + +M+E
Sbjct: 678 DALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE 737
Query: 350 QGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVK 409
P+ V + ++ C D+ ME G P + Y M+D G ++
Sbjct: 738 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK-GCQPNVVTYTAMIDGFGMIGKIE 796
Query: 410 EALDFVRTM---PVEPNQIIWRSIITACHARGELKLGESISKELLRNE-PTHESNY 461
L+ + M V PN + +R +I C G L + ++ +E+ + PTH + Y
Sbjct: 797 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGY 852
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 116/294 (39%), Gaps = 28/294 (9%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVL----------KACAGLSDL 159
+ LI A+ + + +L+ TML G +PN TY ++ KAC +
Sbjct: 556 YTALIHAYLKAKKVSYAN-ELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Query: 160 RLGKAVHGSVVKFG-FDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKT 218
K V + F +DD+ N + Y L + E +
Sbjct: 615 CGSKDVPDVDMYFKQYDDNSERPNVVT--YGALLDGFCKSHRVEEARKLLDAMSMEGCEP 672
Query: 219 DSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVL-----TACADLGALEL 273
+ + + A+I G + G A + EM G T S++ DL + L
Sbjct: 673 NQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL 732
Query: 274 GKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDS--C--TIVSWTSVIV 329
K LE+ +V + +ID K G D+A L + M+ C +V++T++I
Sbjct: 733 SKMLEN-----SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 330 GLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSME 383
G M G+ + L + M +GV P+ V++ ++ CC + +D + M+
Sbjct: 788 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 841
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 139/299 (46%), Gaps = 16/299 (5%)
Query: 141 PNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXX 200
P+ ++ ++ L + + K+ +V+K G ++ N +I+
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILIN-------GLCLVGS 272
Query: 201 XXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVS 260
LA + + DSVT++ + G+ G S A + R+M G+ PD IT
Sbjct: 273 IAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTI 332
Query: 261 VLTACADLGALELG-KWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD-- 317
+L LG +++G L+ + S+ C+ ++ K G +D+A++LF QM
Sbjct: 333 LLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD 392
Query: 318 --SCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKG 375
S +V+++ VI GL G+ A+ L+DEM ++ + P+ + +L C ++ +
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 452
Query: 376 RSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTM---PVEPNQIIWRSII 431
RS +S+ + G I Y ++D +++G ++EAL+ + + + P+ + S+I
Sbjct: 453 RSLLDSLISS-GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 510
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 145/375 (38%), Gaps = 66/375 (17%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAV 165
D+ +N L + F H S ++ R ML G+ P+ TY +L L ++ +G +
Sbjct: 291 DSVTYNILAKGF-HLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVL 349
Query: 166 HGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSA 225
++ GF+ N++I S
Sbjct: 350 LKDMLSRGFE-----LNSII------------------------------------PCSV 368
Query: 226 MIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKK 285
M+ G + G A+ LF +M+ G+ PD + V+ LG ++ WL + K+
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 286 IPKSVELCNALIDMFAKCGDVDKAMNLFRQM----DSCTIVSWTSVIVGLAMHGRGSEAV 341
I + AL+ + G + +A +L + ++ IV + VI G A G EA+
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 342 SLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDL 401
LF ++E G+ P +F ++ C ++ + + R + ++ +G+ P + Y ++D
Sbjct: 489 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK-LYGLAPSVVSYTTLMDA 547
Query: 402 LSRAGFVKEALDFVRTMPVE---PNQIIWRSIITACHARGELKLGESISKELLRNEPTHE 458
+ G K + R M E P + + I K L R
Sbjct: 548 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIF----------------KGLCRGWKHEN 591
Query: 459 SNYVLLSNIYAKLRR 473
N+VL I+ K ++
Sbjct: 592 CNHVLRERIFEKCKQ 606
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 106/252 (42%), Gaps = 20/252 (7%)
Query: 219 DSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLE 278
D V ++ +I GYA+ G A+ LF+ + G+ P T S++ + + +
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Query: 279 SYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTI----VSWTSVIVGLAMH 334
I+ + SV L+D +A CG+ L R+M + I V+++ + GL
Sbjct: 527 DVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRG 586
Query: 335 GRGSEAVSLFDE------------MVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM 382
+ + E M +G+ PD +++ ++ C K + + M
Sbjct: 587 WKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIM 646
Query: 383 EGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRSIITACHARGE 439
+ + Y ++D L G++++A F+ ++ V ++ + ++I A +G+
Sbjct: 647 KSR-NLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGD 705
Query: 440 LKLGESISKELL 451
++ + +LL
Sbjct: 706 PEMAVKLFHQLL 717
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 71/150 (47%), Gaps = 4/150 (2%)
Query: 305 DVDKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLS 364
+ DK ++++++ ++++V+ GL + +AV + + P VSF ++S
Sbjct: 171 ETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMS 230
Query: 365 ACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTMP---VE 421
C VD +S+F ++ G+VP + + +++ L G + EAL+ M VE
Sbjct: 231 GYCKLGFVDMAKSFFCTVL-KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVE 289
Query: 422 PNQIIWRSIITACHARGELKLGESISKELL 451
P+ + + + H G + + +++L
Sbjct: 290 PDSVTYNILAKGFHLLGMISGAWEVIRDML 319
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 135/318 (42%), Gaps = 19/318 (5%)
Query: 101 RASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLR 160
R D + T+I+A + S + LY+ M G+ + V+ L
Sbjct: 286 RGHEADKITYMTMIQA-CYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLN 344
Query: 161 LGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDS 220
G V ++++ G ++ + +I Y L ++ DE K D
Sbjct: 345 EGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIR-------LLHRMIDEGFKPDV 397
Query: 221 VTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESY 280
VT+S ++ G + G A+ F + G+ + + S++ G ++ + L
Sbjct: 398 VTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEE 457
Query: 281 IEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM---DSC--TIVSWTSVIVGLAMHG 335
+ K + NALID F K VD+A+ LF++M + C T+ ++T ++ G+
Sbjct: 458 MSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEH 517
Query: 336 RGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHY 395
R EA+ L+D M+++G+ P F + + C S V + + + G+ I
Sbjct: 518 RNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDEL-APMGV---ILDA 573
Query: 396 GC--MVDLLSRAGFVKEA 411
C M++ L +AG +KEA
Sbjct: 574 ACEDMINTLCKAGRIKEA 591
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 135/286 (47%), Gaps = 18/286 (6%)
Query: 217 KTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTAC---ADLGALEL 273
K D VT++ MI GY + G + +A+ R+M+ G D+IT ++++ AC +D G+
Sbjct: 254 KPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVA 313
Query: 274 GKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM----DSCTIVSWTSVIV 329
L ++ K I + +I K G +++ +F M + +T +I
Sbjct: 314 ---LYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID 370
Query: 330 GLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIV 389
G A G +A+ L M+++G +PD V++ V++ C + V++ YF++ + G+
Sbjct: 371 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFD-GLA 429
Query: 390 PKIEHYGCMVDLLSRAGFVKEALDFVRTMP---VEPNQIIWRSIITACHARGELKLGESI 446
Y ++D L +AG V EA M + + ++I A ++ ++
Sbjct: 430 INSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIAL 489
Query: 447 SKELLRNEPTHESNY---VLLSNIYAKLRRWEQKTKVREMMDMRGM 489
K + E ++ Y +LLS ++ K R E+ K+ +MM +G+
Sbjct: 490 FKRMEEEEGCDQTVYTYTILLSGMF-KEHRNEEALKLWDMMIDKGI 534
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 104/235 (44%), Gaps = 9/235 (3%)
Query: 214 ESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALEL 273
E P T S +A+I + + G + ++R+M+ G+ P T ++ ++
Sbjct: 182 EFPMTVSAA-NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDS 240
Query: 274 GKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDS----CTIVSWTSVIV 329
+ + +E +I + N +I + K G KAM R M++ +++ ++I
Sbjct: 241 AERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQ 300
Query: 330 GLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIV 389
V+L+ EM E+G++ +F V+ C +++G + F +M G
Sbjct: 301 ACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRK-GSK 359
Query: 390 PKIEHYGCMVDLLSRAGFVKEALDFVRTMPVE---PNQIIWRSIITACHARGELK 441
P + Y ++D +++G V++A+ + M E P+ + + ++ G ++
Sbjct: 360 PNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVE 414
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 76/160 (47%), Gaps = 8/160 (5%)
Query: 284 KKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDS----CTIVSWTSVIVGLAMHGRGSE 339
KK ++E +L+D+ A DVD+ + ++ T+ + ++I G E
Sbjct: 146 KKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEE 205
Query: 340 AVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMV 399
+ ++ +M E G+EP ++ +++ + VD F ME I P I Y M+
Sbjct: 206 LLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESG-RIKPDIVTYNTMI 264
Query: 400 DLLSRAGFVKEALDFVRTMPV---EPNQIIWRSIITACHA 436
+AG ++A++ +R M E ++I + ++I AC+A
Sbjct: 265 KGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYA 304
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/417 (20%), Positives = 159/417 (38%), Gaps = 55/417 (13%)
Query: 91 LFSDDPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVL 150
LF D + P + D F+ L A A T Q L L + M G+ N +T ++
Sbjct: 75 LFRDMIHSRPLPTVID---FSRLFSAIAKTKQYDLV-LALCKQMELKGIAHNLYTLSIMI 130
Query: 151 KACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGK 210
L L + G ++K G++ + +T+I+ L +
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLIN-------GLCLEGRVSEALELVDR 183
Query: 211 VFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGA 270
+ + K D +T + ++ G G + A+ L +M G P+ +T VL G
Sbjct: 184 MVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ 243
Query: 271 LELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMD----SCTIVSWTS 326
L L +E + I + +ID K G +D A NLF +M+ + I+++
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI 303
Query: 327 VIVGLAMHGRGS-----------------------------------EAVSLFDEMVEQG 351
+I G GR EA L EM+ +G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 363
Query: 352 VEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEA 411
+ PD +++ ++ C +DK + M G P I + +++ +A + +
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK-GCDPNIRTFNILINGYCKANRIDDG 422
Query: 412 LDFVRTMP---VEPNQIIWRSIITACHARGELKLGESISKELL-RNEPTHESNYVLL 464
L+ R M V + + + ++I G+L + + + +E++ R P + Y +L
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKIL 479
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 115/253 (45%), Gaps = 12/253 (4%)
Query: 207 LAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACA 266
L K+ + + K D+V +S +I G + G A LF EM++ G+ + IT ++
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 267 DLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTI----V 322
+ G + G L + +KI +V + LID F K G + +A L ++M I +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 323 SWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSM 382
++TS+I G +A + D MV +G +P+ +F +++ C + +D G F M
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 383 EGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTM---PVEPNQIIWRSIITACHARGE 439
G+V Y ++ G + A + + M V PN + ++ ++ GE
Sbjct: 430 SLR-GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 440 ----LKLGESISK 448
L++ E I K
Sbjct: 489 SEKALEIFEKIEK 501
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 118/278 (42%), Gaps = 12/278 (4%)
Query: 110 FNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSV 169
+N LI F + + G +L R M++ + PN T+ ++ + LR + +H +
Sbjct: 301 YNILIGGFCNAGRW-DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Query: 170 VKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGG 229
+ G D ++I + + K D + +T ++ +I G
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDL---MVSKGCDPNIRT----FNILING 412
Query: 230 YARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKS 289
Y + + LFR+M + GV D +T +++ +LG L + K L + +K+P +
Sbjct: 413 YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 472
Query: 290 VELCNALIDMFAKCGDVDKAMNLFRQMDSCT----IVSWTSVIVGLAMHGRGSEAVSLFD 345
+ L+D G+ +KA+ +F +++ I + +I G+ + +A LF
Sbjct: 473 IVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 532
Query: 346 EMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSME 383
+ +GV+P ++ ++ C + + F ME
Sbjct: 533 SLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/366 (20%), Positives = 142/366 (38%), Gaps = 43/366 (11%)
Query: 127 GLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIH 186
+ L+R M+ +P + + A A L A+ + G +L+ + MI+
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 187 MYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREM 246
+ GK+ + +++T+S +I G G S A+ L M
Sbjct: 132 CFCRCRKLCLAFSAM-------GKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRM 184
Query: 247 QVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDV 306
MG PD IT+ +++ G GK E+ + LID + G
Sbjct: 185 VEMGHKPDLITINTLVN-----GLCLSGKEAEAML--------------LIDKMVEYGCQ 225
Query: 307 DKAMNLFRQMDSCTIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSAC 366
A V++ V+ + G+ + A+ L +M E+ ++ D V + ++
Sbjct: 226 PNA------------VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 367 CHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEALDFVRTM---PVEPN 423
C +D + FN ME GI I Y ++ AG + +R M + PN
Sbjct: 274 CKHGSLDNAFNLFNEMEMK-GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332
Query: 424 QIIWRSIITACHARGELKLGESISKELL-RNEPTHESNYVLLSNIYAKLRRWEQKTKVRE 482
+ + +I + G+L+ E + KE++ R Y L + + K ++ ++ +
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVD 392
Query: 483 MMDMRG 488
+M +G
Sbjct: 393 LMVSKG 398
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 170/398 (42%), Gaps = 26/398 (6%)
Query: 101 RASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDLR 160
R S D +NT+I + + Q M++ G++P+ +Y ++ + +
Sbjct: 155 RVISIDTVTYNTVISGLCEHGLADEA-YQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFV 213
Query: 161 LGKAVHGSVVKFGFDDDLHVQNTMIH-MYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTD 219
KA+ D++ N + H + ++G FD D
Sbjct: 214 RAKALV---------DEISELNLITHTILLSSYYNLHAIEEAYRDMVMSG--FDP----D 258
Query: 220 SVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLES 279
VT+S++I + G L REM+ M V P+ +T +++ + L S
Sbjct: 259 VVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYS 318
Query: 280 YIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM----DSCTIVSWTSVIVGLAMHG 335
+ + IP + + L+D K GD+ +A F+ + +V++T+++ GL G
Sbjct: 319 QMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAG 378
Query: 336 RGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHY 395
S A + +M+E+ V P+ V++ +++ ++++ S ME +VP Y
Sbjct: 379 DLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQ-NVVPNGFTY 437
Query: 396 GCMVDLLSRAGFVKEALDF---VRTMPVEPNQIIWRSIITACHARGELKLGESISKELLR 452
G ++D L +AG + A++ +R + VE N I +++ G +K + + K+++
Sbjct: 438 GTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVS 497
Query: 453 NEPTHES-NYVLLSNIYAKLRRWEQKTKVREMMDMRGM 489
T + NY L +++ K E E M RGM
Sbjct: 498 KGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGM 535
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 139/366 (37%), Gaps = 60/366 (16%)
Query: 95 DPTTAPRASSFDAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKA-- 152
DP AP + LF+TL R + + + L M +GVVP+ + ++
Sbjct: 46 DPDLAPIKTRVYVSLFHTLFRLYLSCERLYGAARTL-SAMCTFGVVPDSRLWNSLIHQFN 104
Query: 153 CAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVF 212
GL ++ ++ ++ G D+ N +IH + L +V
Sbjct: 105 VNGLVHDQVS-LIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL------LRNRVI 157
Query: 213 DESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALE 272
D+VT++ +I G G + A EM MG+ PD +
Sbjct: 158 S----IDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTV---------------- 197
Query: 273 LGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTSVIVGLA 332
SY N LID F K G+ +A L ++ +++ T ++
Sbjct: 198 ------SY-------------NTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYY 238
Query: 333 MHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKI 392
EA + +MV G +PD V+F +++ C V +G ME + P
Sbjct: 239 NLHAIEEA---YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREME-EMSVYPNH 294
Query: 393 EHYGCMVDLLSRAGFVKEALDF-----VRTMPVEPNQIIWRSIITACHARGELKLGESIS 447
Y +VD L +A + AL VR +PV+ +++ ++ G+L+ E
Sbjct: 295 VTYTTLVDSLFKANIYRHALALYSQMVVRGIPVD--LVVYTVLMDGLFKAGDLREAEKTF 352
Query: 448 KELLRN 453
K LL +
Sbjct: 353 KMLLED 358
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 6/154 (3%)
Query: 219 DSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGAL-ELGKWL 277
D+VT+++++ GY H +A+ + M G+ P+ T +++ +D G + E+ KWL
Sbjct: 712 DTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWL 771
Query: 278 ESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTIVSWTS----VIVGLAM 333
P NALI AK G++ +M ++ +M + +V TS +I A
Sbjct: 772 SEMKSRGMRPDDFTY-NALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFAN 830
Query: 334 HGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACC 367
G+ +A L EM ++GV P+ ++ ++S C
Sbjct: 831 VGKMLQARELLKEMGKRGVSPNTSTYCTMISGLC 864
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 132/289 (45%), Gaps = 10/289 (3%)
Query: 210 KVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLG 269
++ ++S + VT+S+MI GY ++G AV L R+M+ V P+ T +V+ G
Sbjct: 389 QMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAG 448
Query: 270 ALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTI----VSWT 325
E+ L + + ++ + +AL++ + G + + L + M S + +++T
Sbjct: 449 KEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYT 508
Query: 326 SVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGN 385
S+I G A++ +EM E+G+ D VS+ ++S V +Y E
Sbjct: 509 SLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREK- 567
Query: 386 FGIVPKIEHYGCMVDLLSRAGFVKEAL---DFVRTMPVEPNQIIWRSIITACHARGELKL 442
GI P I + M++ + G + L D +++ ++P+ + ++ G+++
Sbjct: 568 -GIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEE 626
Query: 443 GESISKELLRNE-PTHESNYVLLSNIYAKLRRWEQKTKVREMMDMRGMK 490
I +++ E + + Y + + +K +R + K E + G+K
Sbjct: 627 AIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIK 675
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/335 (19%), Positives = 140/335 (41%), Gaps = 12/335 (3%)
Query: 219 DSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLE 278
D T++ M+ ++G S + L+ +M+ G+ P ++ V+ + G +E +
Sbjct: 572 DIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHIL 631
Query: 279 SYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQMDSCTI----VSWTSVIVGLAMH 334
+ + +I ++ +D +K D + S I + ++I L
Sbjct: 632 NQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKL 691
Query: 335 GRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEH 394
G +A + +M +G PD V+F ++ V K S ++ M GI P +
Sbjct: 692 GMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMM-EAGISPNVAT 750
Query: 395 YGCMVDLLSRAGFVKEA---LDFVRTMPVEPNQIIWRSIITACHARGELKLGESISKELL 451
Y ++ LS AG +KE L +++ + P+ + ++I+ G +K +I E++
Sbjct: 751 YNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMI 810
Query: 452 RNEPTHE-SNYVLLSNIYAKLRRWEQKTKVREMMDMRGMKKVPGSTMIELNNEMCEFVAG 510
+ + S Y +L + +A + + Q ++ + M RG+ ST + + +C+
Sbjct: 811 ADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSP-NTSTYCTMISGLCKLCTH 869
Query: 511 DKSHDQYKQIY--EMVDEMGREIKRAGYVPTTSQV 543
K +Y E + ++ GY+P +
Sbjct: 870 PDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCNQTI 904
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 164/410 (40%), Gaps = 59/410 (14%)
Query: 129 QLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMY 188
+ + M+R G++P+ Y ++ D+R + KF + ++H +
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR-------AASKFFY--EMHSR------- 380
Query: 189 XXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQV 248
D +P D +T++A+I G+ + G A LF EM
Sbjct: 381 ------------------------DITP--DVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 249 MGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDK 308
G+ PD +T ++ G ++ + +++ +V LID K GD+D
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 309 AMNLFRQMDSC----TIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLS 364
A L +M I ++ S++ GL G EAV L E G+ D V++ ++
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 365 ACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEA---LDFVRTMPVE 421
A C S +DK + M G G+ P I + +++ G +++ L+++ +
Sbjct: 535 AYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 422 PNQIIWRSIITACHARGELKLGESISKELL-RNEPTHESNYVLLSNIYAKLRRWEQKTKV 480
PN + S++ R LK +I K++ R Y L + K R ++ +
Sbjct: 594 PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL 653
Query: 481 REMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGRE 530
+ M +G V ST L + G ++ + E+ D+M RE
Sbjct: 654 FQEMKGKGF-SVSVSTYSVL-------IKGFLKRKKFLEAREVFDQMRRE 695
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 115/261 (44%), Gaps = 16/261 (6%)
Query: 217 KTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKW 276
K +S + ++IG R + A F EM G+ PD + +++ G +
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 277 LESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM-------DSCTIVSWTSVIV 329
+ + I V A+I F + GD+ +A LF +M DS V++T +I
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS---VTFTELIN 429
Query: 330 GLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIV 389
G G +A + + M++ G P+ V++ ++ C +D + M G+
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM-WKIGLQ 488
Query: 390 PKIEHYGCMVDLLSRAGFVKEALDFV---RTMPVEPNQIIWRSIITACHARGELKLGESI 446
P I Y +V+ L ++G ++EA+ V + + + + +++ A GE+ + I
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 447 SKELLRN--EPTHESNYVLLS 465
KE+L +PT + VL++
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMN 569
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 123/311 (39%), Gaps = 15/311 (4%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDL-RLGKA 164
D ++ TLI F +++ + + M + P+ TY ++ + D+ GK
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAAS-KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 165 VHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWS 224
H K G + D +I+ Y + + + VT++
Sbjct: 409 FHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFR-------VHNHMIQAGCSPNVVTYT 460
Query: 225 AMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWK 284
+I G + G A L EM +G+ P+ T S++ G +E L E
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 520
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMNLFRQM----DSCTIVSWTSVIVGLAMHGRGSEA 340
+ L+D + K G++DKA + ++M TIV++ ++ G +HG +
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 341 VSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVD 400
L + M+ +G+ P+ +F ++ C + + + M G+ P + Y +V
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR-GVGPDGKTYENLVK 639
Query: 401 LLSRAGFVKEA 411
+A +KEA
Sbjct: 640 GHCKARNMKEA 650
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 123/333 (36%), Gaps = 79/333 (23%)
Query: 236 SSRAVGLFREMQVMGVC-----------------------------------PDEITMVS 260
++ A+ +FRE +GVC PD I+ +
Sbjct: 227 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST 286
Query: 261 VLTACADLGALE-LGKWLE----------SYIEWKKIPKSVELC---------------- 293
V+ G L+ + K +E SYI I +C
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 294 --------NALIDMFAKCGDVDKAMNLFRQMDSCTI----VSWTSVIVGLAMHGRGSEAV 341
LID F K GD+ A F +M S I +++T++I G G EA
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 342 SLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDL 401
LF EM +G+EPD V+F +++ C + + N M G P + Y ++D
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI-QAGCSPNVVTYTTLIDG 465
Query: 402 LSRAGFVKEALDFVRTM---PVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHE 458
L + G + A + + M ++PN + SI+ G ++ + E +
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 459 S-NYVLLSNIYAKLRRWEQKTKVREMMDMRGMK 490
+ Y L + Y K ++ ++ + M +G++
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 164/410 (40%), Gaps = 59/410 (14%)
Query: 129 QLYRTMLRYGVVPNKFTYPFVLKACAGLSDLRLGKAVHGSVVKFGFDDDLHVQNTMIHMY 188
+ + M+R G++P+ Y ++ D+R + KF + ++H +
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR-------AASKFFY--EMHSR------- 380
Query: 189 XXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWSAMIGGYARRGHSSRAVGLFREMQV 248
D +P D +T++A+I G+ + G A LF EM
Sbjct: 381 ------------------------DITP--DVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 249 MGVCPDEITMVSVLTACADLGALELGKWLESYIEWKKIPKSVELCNALIDMFAKCGDVDK 308
G+ PD +T ++ G ++ + +++ +V LID K GD+D
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 309 AMNLFRQMDSC----TIVSWTSVIVGLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLS 364
A L +M I ++ S++ GL G EAV L E G+ D V++ ++
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 365 ACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDLLSRAGFVKEA---LDFVRTMPVE 421
A C S +DK + M G G+ P I + +++ G +++ L+++ +
Sbjct: 535 AYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 422 PNQIIWRSIITACHARGELKLGESISKELL-RNEPTHESNYVLLSNIYAKLRRWEQKTKV 480
PN + S++ R LK +I K++ R Y L + K R ++ +
Sbjct: 594 PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL 653
Query: 481 REMMDMRGMKKVPGSTMIELNNEMCEFVAGDKSHDQYKQIYEMVDEMGRE 530
+ M +G V ST L + G ++ + E+ D+M RE
Sbjct: 654 FQEMKGKGF-SVSVSTYSVL-------IKGFLKRKKFLEAREVFDQMRRE 695
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 115/261 (44%), Gaps = 16/261 (6%)
Query: 217 KTDSVTWSAMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKW 276
K +S + ++IG R + A F EM G+ PD + +++ G +
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 277 LESYIEWKKIPKSVELCNALIDMFAKCGDVDKAMNLFRQM-------DSCTIVSWTSVIV 329
+ + I V A+I F + GD+ +A LF +M DS V++T +I
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS---VTFTELIN 429
Query: 330 GLAMHGRGSEAVSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIV 389
G G +A + + M++ G P+ V++ ++ C +D + M G+
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM-WKIGLQ 488
Query: 390 PKIEHYGCMVDLLSRAGFVKEALDFV---RTMPVEPNQIIWRSIITACHARGELKLGESI 446
P I Y +V+ L ++G ++EA+ V + + + + +++ A GE+ + I
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 447 SKELLRN--EPTHESNYVLLS 465
KE+L +PT + VL++
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMN 569
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 123/311 (39%), Gaps = 15/311 (4%)
Query: 106 DAFLFNTLIRAFAHTPQSKSSGLQLYRTMLRYGVVPNKFTYPFVLKACAGLSDL-RLGKA 164
D ++ TLI F +++ + + M + P+ TY ++ + D+ GK
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAAS-KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 165 VHGSVVKFGFDDDLHVQNTMIHMYXXXXXXXXXXXXXXXXXXLAGKVFDESPKTDSVTWS 224
H K G + D +I+ Y + + + VT++
Sbjct: 409 FHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFR-------VHNHMIQAGCSPNVVTYT 460
Query: 225 AMIGGYARRGHSSRAVGLFREMQVMGVCPDEITMVSVLTACADLGALELGKWLESYIEWK 284
+I G + G A L EM +G+ P+ T S++ G +E L E
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 520
Query: 285 KIPKSVELCNALIDMFAKCGDVDKAMNLFRQM----DSCTIVSWTSVIVGLAMHGRGSEA 340
+ L+D + K G++DKA + ++M TIV++ ++ G +HG +
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 341 VSLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVD 400
L + M+ +G+ P+ +F ++ C + + + M G+ P + Y +V
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR-GVGPDGKTYENLVK 639
Query: 401 LLSRAGFVKEA 411
+A +KEA
Sbjct: 640 GHCKARNMKEA 650
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 123/333 (36%), Gaps = 79/333 (23%)
Query: 236 SSRAVGLFREMQVMGVC-----------------------------------PDEITMVS 260
++ A+ +FRE +GVC PD I+ +
Sbjct: 227 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST 286
Query: 261 VLTACADLGALE-LGKWLE----------SYIEWKKIPKSVELC---------------- 293
V+ G L+ + K +E SYI I +C
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 294 --------NALIDMFAKCGDVDKAMNLFRQMDSCTI----VSWTSVIVGLAMHGRGSEAV 341
LID F K GD+ A F +M S I +++T++I G G EA
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 342 SLFDEMVEQGVEPDDVSFIGVLSACCHSKLVDKGRSYFNSMEGNFGIVPKIEHYGCMVDL 401
LF EM +G+EPD V+F +++ C + + N M G P + Y ++D
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI-QAGCSPNVVTYTTLIDG 465
Query: 402 LSRAGFVKEALDFVRTM---PVEPNQIIWRSIITACHARGELKLGESISKELLRNEPTHE 458
L + G + A + + M ++PN + SI+ G ++ + E +
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 459 S-NYVLLSNIYAKLRRWEQKTKVREMMDMRGMK 490
+ Y L + Y K ++ ++ + M +G++
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558