Miyakogusa Predicted Gene
- Lj5g3v0539710.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0539710.2 Non Characterized Hit- tr|C6TLC4|C6TLC4_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,95.05,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Helicase_C,Helicase, C-terminal; helicase superfami,CUFF.53243.2
(102 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 202 4e-53
Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like prote... 199 4e-52
Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 199 4e-52
Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like prote... 188 1e-48
Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 94 3e-20
Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 94 3e-20
Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 94 4e-20
Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 94 4e-20
Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 92 2e-19
Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 92 2e-19
Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like prote... 90 4e-19
Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 90 5e-19
Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 90 6e-19
Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like prote... 89 6e-19
Medtr7g100820.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 82 9e-17
Medtr4g049910.1 | DEAD-box ATP-dependent RNA helicase-like prote... 77 2e-15
Medtr8g018370.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 76 8e-15
Medtr1g061970.1 | DEAD-box ATP-dependent RNA helicase-like prote... 75 1e-14
Medtr2g066050.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 74 3e-14
Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like prote... 74 3e-14
Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like prote... 74 3e-14
Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 73 5e-14
Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like prote... 73 5e-14
Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like prote... 73 5e-14
Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 73 6e-14
Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 72 8e-14
Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 72 8e-14
Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 72 8e-14
Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 72 8e-14
Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like prote... 70 3e-13
Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 70 4e-13
Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like prote... 70 5e-13
Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like prote... 70 5e-13
Medtr0427s0010.1 | DEAD-box RNA helicase family protein | HC | s... 69 1e-12
Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC | ch... 69 1e-12
Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC | ch... 69 1e-12
Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC | ch... 69 1e-12
Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC | ch... 69 1e-12
Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC | ch... 69 1e-12
Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC | ch... 69 1e-12
Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC | ch... 69 1e-12
Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC | ch... 69 1e-12
Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC | ch... 69 1e-12
Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC | c... 69 1e-12
Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 68 2e-12
Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 68 2e-12
Medtr6g082080.1 | DEAD-box ATP-dependent RNA helicase-like prote... 67 3e-12
Medtr6g082080.2 | DEAD-box ATP-dependent RNA helicase-like prote... 67 3e-12
Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 67 4e-12
Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 67 4e-12
Medtr7g056830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 67 4e-12
Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 67 4e-12
Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 65 1e-11
Medtr2g063080.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 64 3e-11
Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 64 4e-11
Medtr1g022305.1 | DEAD-box ATP-dependent RNA helicase-like prote... 64 4e-11
Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like prote... 64 4e-11
Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like prote... 63 5e-11
Medtr4g059460.1 | DEAD-box ATP-dependent RNA helicase-like prote... 62 2e-10
Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 61 2e-10
Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 60 3e-10
Medtr2g043360.1 | DEAD-box ATP-dependent RNA helicase-like prote... 60 4e-10
Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like prote... 59 9e-10
Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 59 1e-09
Medtr2g043360.2 | DEAD-box ATP-dependent RNA helicase-like prote... 59 1e-09
Medtr6g056080.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 59 1e-09
Medtr4g079320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 57 3e-09
Medtr1g046570.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 56 6e-09
Medtr1g102410.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 56 8e-09
Medtr5g077690.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 55 1e-08
Medtr3g071620.1 | DEAD-box ATP-dependent RNA helicase-like prote... 55 1e-08
Medtr2g088350.1 | helicase family carboxy-terminal domain protei... 55 2e-08
Medtr8g018350.1 | eukaryotic translation initiation factor 4A1 |... 54 2e-08
Medtr5g069330.1 | DEAD-box ATP-dependent RNA helicase | LC | chr... 54 4e-08
Medtr5g069330.4 | DEAD-box ATP-dependent RNA helicase | LC | chr... 54 4e-08
Medtr5g069330.2 | DEAD-box ATP-dependent RNA helicase | LC | chr... 54 4e-08
Medtr5g069330.3 | DEAD-box ATP-dependent RNA helicase | LC | chr... 54 5e-08
Medtr5g069330.5 | DEAD-box ATP-dependent RNA helicase | LC | chr... 54 5e-08
Medtr8g097000.1 | DEAD-box ATP-dependent RNA helicase family pro... 53 6e-08
Medtr5g092560.2 | DEAD-box ATP-dependent RNA helicase-like prote... 53 7e-08
Medtr1g023070.1 | DEAD-box ATP-dependent RNA helicase, putative ... 53 7e-08
Medtr1g023070.3 | DEAD-box ATP-dependent RNA helicase, putative ... 53 7e-08
Medtr2g055850.1 | DEAD-box ATP-dependent RNA helicase-like prote... 53 7e-08
Medtr1g023070.2 | DEAD-box ATP-dependent RNA helicase, putative ... 52 8e-08
Medtr1g023070.4 | DEAD-box ATP-dependent RNA helicase, putative ... 52 8e-08
Medtr5g092560.1 | DEAD-box ATP-dependent RNA helicase-like prote... 52 1e-07
Medtr1g009617.1 | DEAD-box ATP-dependent RNA helicase-like prote... 52 1e-07
Medtr4g112320.1 | DEAD-box ATP-dependent RNA helicase-like prote... 51 2e-07
Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family pro... 51 3e-07
Medtr4g112340.1 | DEAD-box ATP-dependent RNA helicase-like prote... 51 3e-07
Medtr8g079462.1 | DEAD-box ATP-dependent RNA helicase-like prote... 51 3e-07
Medtr8g079452.1 | helicase family carboxy-terminal domain protei... 50 4e-07
Medtr1g083130.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 50 4e-07
Medtr4g068990.1 | DEAD-box ATP-dependent RNA helicase-like prote... 50 4e-07
Medtr8g042690.1 | DEAD-box ATP-dependent RNA helicase-like prote... 50 6e-07
Medtr8g018330.1 | eukaryotic translation initiation factor 4A1 |... 50 7e-07
Medtr8g027775.1 | DEAD-box ATP-dependent RNA helicase family pro... 49 8e-07
Medtr8g027770.1 | DEAD-box ATP-dependent RNA helicase family pro... 49 9e-07
Medtr4g131750.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 48 2e-06
Medtr8g062720.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 48 2e-06
Medtr4g068990.2 | DEAD-box ATP-dependent RNA helicase-like prote... 47 3e-06
Medtr6g039840.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 47 5e-06
Medtr6g039840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 47 5e-06
>Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:2463886-2455302 | 20130731
Length = 427
Score = 202 bits (515), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 96/101 (95%), Positives = 100/101 (99%)
Query: 2 KLKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKG 61
+LKRYKGFKEG TRILVATDLVGRGIDIERVNIVIN+DMPDSADTYLHRVGRAGRFGTKG
Sbjct: 327 RLKRYKGFKEGHTRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKG 386
Query: 62 LAITFVSCATDVDVLNNVQSRFEVDIKQLPEQIDTSTYMPS 102
LAITFVSC++DVDVLNNVQSRFEVDIKQLPEQIDTSTYMPS
Sbjct: 387 LAITFVSCSSDVDVLNNVQSRFEVDIKQLPEQIDTSTYMPS 427
>Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 199 bits (507), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 93/101 (92%), Positives = 100/101 (99%)
Query: 2 KLKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKG 61
+LKRY+GFKEG +RILVATDLVGRGIDIERVNIVIN+DMPDSADTYLHRVGRAGRFGTKG
Sbjct: 327 RLKRYRGFKEGHSRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKG 386
Query: 62 LAITFVSCATDVDVLNNVQSRFEVDIKQLPEQIDTSTYMPS 102
LAITFVSC++DVDVLNNVQSRFE+DIKQLPEQIDTSTYMPS
Sbjct: 387 LAITFVSCSSDVDVLNNVQSRFEIDIKQLPEQIDTSTYMPS 427
>Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 199 bits (507), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 93/101 (92%), Positives = 100/101 (99%)
Query: 2 KLKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKG 61
+LKRY+GFKEG +RILVATDLVGRGIDIERVNIVIN+DMPDSADTYLHRVGRAGRFGTKG
Sbjct: 327 RLKRYRGFKEGHSRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKG 386
Query: 62 LAITFVSCATDVDVLNNVQSRFEVDIKQLPEQIDTSTYMPS 102
LAITFVSC++DVDVLNNVQSRFE+DIKQLPEQIDTSTYMPS
Sbjct: 387 LAITFVSCSSDVDVLNNVQSRFEIDIKQLPEQIDTSTYMPS 427
>Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:2449773-2458512 | 20130731
Length = 504
Score = 188 bits (477), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/101 (89%), Positives = 96/101 (95%)
Query: 2 KLKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKG 61
+LKRYKGFKEG+ RILVATDLVGRGIDIERVNIVIN+DMPDSADTYLHRVGRAGRFGTKG
Sbjct: 404 RLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKG 463
Query: 62 LAITFVSCATDVDVLNNVQSRFEVDIKQLPEQIDTSTYMPS 102
LAITFVS A D +VLN VQSRFEVDIK+LPEQIDTSTYMP+
Sbjct: 464 LAITFVSSAGDSEVLNQVQSRFEVDIKELPEQIDTSTYMPN 504
>Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:17536994-17532829 | 20130731
Length = 413
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
Query: 7 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 66
+ F+ G +R+L+ TDL+ RGID+++V++VIN+D+P + YLHR+GR+GRFG KG+AI F
Sbjct: 323 REFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF 382
Query: 67 VSCATDVDVLNNVQSRFEVDIKQLPEQI 94
V+ D +L+++Q + V I++LP +
Sbjct: 383 VT-TDDERMLSDIQKFYNVLIEELPSNV 409
>Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:6253262-6248871 | 20130731
Length = 413
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
F+ G +R+L+ TDL+ RGID+++V++VIN+D+P + YLHR+GR+GRFG KG++I FV+
Sbjct: 325 FRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINFVT 384
Query: 69 CATDVDVLNNVQSRFEVDIKQLPEQI 94
D +L ++Q + V I++LP +
Sbjct: 385 -GEDARMLADIQKFYNVTIEELPSNV 409
>Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 413
Score = 93.6 bits (231), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Query: 7 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 66
+ F+ G +R+L+ TDL+ RGID+++V++VIN+D+P + YLHR+GR+GRFG KG+AI F
Sbjct: 323 REFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF 382
Query: 67 VSCATDVDVLNNVQSRFEVDIKQLPEQI 94
V+ D +L ++Q + V +++LP +
Sbjct: 383 VTLE-DARMLADIQKFYNVIVEELPSNV 409
>Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 397
Score = 93.6 bits (231), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Query: 7 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 66
+ F+ G +R+L+ TDL+ RGID+++V++VIN+D+P + YLHR+GR+GRFG KG+AI F
Sbjct: 307 REFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF 366
Query: 67 VSCATDVDVLNNVQSRFEVDIKQLPEQI 94
V+ D +L ++Q + V +++LP +
Sbjct: 367 VTLE-DARMLADIQKFYNVIVEELPSNV 393
>Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52325320-52330070 | 20130731
Length = 413
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
F+ G +R+L+ TDL+ RGID+++V++VIN D+P + YLHR+GR+GRFG KG+AI FV+
Sbjct: 325 FRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVT 384
Query: 69 CATDVDVLNNVQSRFEVDIKQLPEQI 94
D +L ++Q + V +++LP +
Sbjct: 385 -KEDEGMLRDIQKFYNVLVEELPSNV 409
>Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52326072-52330070 | 20130731
Length = 430
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
F+ G +R+L+ TDL+ RGID+++V++VIN D+P + YLHR+GR+GRFG KG+AI FV+
Sbjct: 342 FRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVT 401
Query: 69 CATDVDVLNNVQSRFEVDIKQLPEQI 94
D +L ++Q + V +++LP +
Sbjct: 402 -KEDEGMLRDIQKFYNVLVEELPSNV 426
>Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28990557-28982494 | 20130731
Length = 523
Score = 90.1 bits (222), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 6 YKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAIT 65
+ F+ G R LV TDL RGIDI+ VN+VIN D P +++TYLHRVGR+GRFG GLA+
Sbjct: 429 FHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVN 488
Query: 66 FVSCATDVDVLNNVQSRFEVDIKQLPEQIDTSTY 99
V+ + L ++ +IKQ+P ID + Y
Sbjct: 489 LVTYEDRFN-LYRIEQELGTEIKQIPPFIDQAIY 521
>Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:29001486-28993339 | 20130731
Length = 516
Score = 89.7 bits (221), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 6 YKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAIT 65
+ F+ G R LV TDL RGIDI+ VN+VIN D P +++TYLHRVGR+GRFG GLA+
Sbjct: 422 FHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVN 481
Query: 66 FVSCATDVDVLNNVQSRFEVDIKQLPEQIDTSTY 99
++ + L ++ +IKQ+P ID + Y
Sbjct: 482 LITYEDRFN-LYRIEQELGTEIKQIPPFIDQAVY 514
>Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:15371233-15366440 | 20130731
Length = 406
Score = 89.7 bits (221), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
F+ G TR+L+ TD+ RG+D+++V++VIN+D+P++ + Y+HR+GR+GRFG KG+AI FV
Sbjct: 318 FRAGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVK 377
Query: 69 CATDVDVLNNVQSRFEVDIKQLP 91
+ D+ +L +++ + I ++P
Sbjct: 378 -SDDIKILRDIEQYYSTQIDEMP 399
>Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28977519-28970435 | 20130731
Length = 514
Score = 89.4 bits (220), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 6 YKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAIT 65
+ F+ G R LV TDL RGIDI+ VN+VIN D P +++TYLHRVGR+GRFG GLA+
Sbjct: 420 FHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVN 479
Query: 66 FVSCATDVDVLNNVQSRFEVDIKQLPEQIDTSTY 99
++ + L ++ +IKQ+P ID + Y
Sbjct: 480 LITYEDRFN-LYRIEQELGTEIKQIPPFIDQAIY 512
>Medtr7g100820.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:40632868-40627375 | 20130731
Length = 619
Score = 82.4 bits (202), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 8 GFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFV 67
F+ G+T +L+ATD+V RG+D + +N VIN+D PDSA Y+HR+GR+GR G G AITF
Sbjct: 417 NFRAGKTWVLIATDVVARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFY 476
Query: 68 SCATDVDVLNNVQS 81
+ D+ L NV +
Sbjct: 477 T-EEDIPFLRNVSN 489
>Medtr4g049910.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:17617607-17621556 | 20130731
Length = 450
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 61/97 (62%), Gaps = 10/97 (10%)
Query: 7 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMP----------DSADTYLHRVGRAGR 56
K FK+G T++L++TD++ RG D ++VN+VIN+D+P + YLHRVGRAGR
Sbjct: 338 KEFKDGLTQVLISTDVLSRGFDQDQVNLVINYDLPLKYTRGQEPEPDCEVYLHRVGRAGR 397
Query: 57 FGTKGLAITFVSCATDVDVLNNVQSRFEVDIKQLPEQ 93
FG KG + ++ V++ ++ F + ++++ E+
Sbjct: 398 FGRKGAVFNLICHESEQMVMSKIEEHFGIHVEEVREK 434
>Medtr8g018370.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:6241938-6240697 | 20130731
Length = 325
Score = 75.9 bits (185), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 7 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 66
+ F+ G +IL+ TD + G+D++ V++VIN+D+P + YLHR+ GRFG KG+AI F
Sbjct: 234 RNFQSGSPQILITTDPLVYGLDVQEVSLVINYDLPTLPENYLHRICHKGRFGRKGVAINF 293
Query: 67 VSCATDVDVLNNVQSRFEVDIKQLP 91
V+ D +L+++Q V I++LP
Sbjct: 294 VT-LDDFRMLSDIQKLSNVIIEELP 317
>Medtr1g061970.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:27069344-27076281 | 20130731
Length = 491
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 14/98 (14%)
Query: 7 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMP--------------DSADTYLHRVG 52
K FK+G T++L++TD++ RG D ++VN+VIN+D+P + YLHRVG
Sbjct: 375 KEFKDGLTQVLISTDVLARGFDQQQVNLVINYDLPLKYAAEYTHGHEQEPDYEVYLHRVG 434
Query: 53 RAGRFGTKGLAITFVSCATDVDVLNNVQSRFEVDIKQL 90
RAGRFG KG + D L+ ++ F IK++
Sbjct: 435 RAGRFGRKGAVFNLICGERDEKTLSKIEKHFGTYIKEV 472
>Medtr2g066050.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:27664451-27658107 | 20130731
Length = 513
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 2 KLKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKG 61
+L+ FK G+ +L+ATD+ GRG+DI V++VIN+D+P Y+HRVGR R G G
Sbjct: 335 RLEALHDFKSGKVPVLLATDVAGRGLDIPTVDLVINYDVPRFPRDYIHRVGRTARAGRGG 394
Query: 62 LAITFVSCATDVDVLNNVQSRFE 84
LA++ V+ DVD++ +++ E
Sbjct: 395 LALSLVT-QNDVDLIREIETLIE 416
>Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768711-37774877 | 20130731
Length = 613
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%)
Query: 7 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 66
+ FK G T ILVATD+ RG+DI V V+N D+P+ D Y+HR+GR GR G KGLA F
Sbjct: 448 RSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAF 507
>Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768655-37774862 | 20130731
Length = 613
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%)
Query: 7 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 66
+ FK G T ILVATD+ RG+DI V V+N D+P+ D Y+HR+GR GR G KGLA F
Sbjct: 448 RSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAF 507
>Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 73.2 bits (178), Expect = 5e-14, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
F+ G++ ILVATD+ RG+DI+ + +VIN+D P+ + Y+HR+GR GR G G+A TF S
Sbjct: 785 FRTGKSPILVATDVAARGLDIKDIRVVINYDFPNGVEDYVHRIGRTGRAGATGVAYTFFS 844
>Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 73.2 bits (178), Expect = 5e-14, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
F+ G++ ILVATD+ RG+DI+ + +VIN+D P+ + Y+HR+GR GR G G+A TF S
Sbjct: 785 FRTGKSPILVATDVAARGLDIKDIRVVINYDFPNGVEDYVHRIGRTGRAGATGVAYTFFS 844
>Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:43035445-43041856 | 20130731
Length = 499
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
FK G++ I+ ATD+ RG+D++ V VIN+D P S + Y+HR+GR GR G KG A TF +
Sbjct: 386 FKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFT 445
Query: 69 CA 70
A
Sbjct: 446 AA 447
>Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:23756195-23750953 | 20130731
Length = 608
Score = 72.8 bits (177), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%)
Query: 7 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 66
+ FK G T ILVATD+ RG+DI RV V+N D+P+ D Y+HR+GR GR G GLA F
Sbjct: 456 RSFKTGNTPILVATDVAARGLDIPRVAHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAF 515
>Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:56166694-56169176 | 20130731
Length = 706
Score = 72.4 bits (176), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 7 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 66
+GF+ + +LVATD+ GRGIDI V VIN+DMP + + Y HR+GR GR G G+A TF
Sbjct: 593 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTF 652
Query: 67 VSCATDVDVL 76
++ D DV
Sbjct: 653 LTL-QDTDVF 661
>Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 72.4 bits (176), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 7 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 66
+GF+ + +LVATD+ GRGIDI V VIN+DMP + + Y HR+GR GR G G+A TF
Sbjct: 553 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTF 612
Query: 67 VSCATDVDVL 76
++ D DV
Sbjct: 613 LTL-QDTDVF 621
>Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 72.4 bits (176), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 7 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 66
+GF+ + +LVATD+ GRGIDI V VIN+DMP + + Y HR+GR GR G G+A TF
Sbjct: 553 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTF 612
Query: 67 VSCATDVDVL 76
++ D DV
Sbjct: 613 LTL-QDTDVF 621
>Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708891-704351 | 20130731
Length = 666
Score = 72.4 bits (176), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 7 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 66
+GF+ + +LVATD+ GRGIDI V VIN+DMP + + Y HR+GR GR G G+A TF
Sbjct: 553 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTF 612
Query: 67 VSCATDVDVL 76
++ D DV
Sbjct: 613 LTL-QDTDVF 621
>Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 625
Score = 70.5 bits (171), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
FK G++ I+ ATD+ RG+D++ + V+N+D P S + Y+HR+GR GR G KG A +F +
Sbjct: 492 FKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPSSLEDYVHRIGRTGRAGAKGTAYSFFT 551
Query: 69 CA 70
A
Sbjct: 552 SA 553
>Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46980468-46984247 | 20130731
Length = 671
Score = 70.1 bits (170), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 40/62 (64%)
Query: 7 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 66
+ FK G T I+VATD+ RG+DI V VIN D+P D Y+HR+GR GR G GLA F
Sbjct: 445 RSFKRGLTPIMVATDVASRGLDIPHVAHVINFDLPRDIDDYVHRIGRTGRAGQSGLATAF 504
Query: 67 VS 68
S
Sbjct: 505 FS 506
>Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF-- 66
F+ G+T +LVATD+ RG+D++ + +V+N D P + Y+HR+GR GR G G+A TF
Sbjct: 454 FRSGRTPVLVATDVAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGRAGATGIAYTFFG 513
Query: 67 ---VSCATD-VDVLNNVQSRFEVDIKQL 90
A+D + +L R ++++L
Sbjct: 514 DQDAKHASDLIKILEGANQRVPPELREL 541
>Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF-- 66
F+ G+T +LVATD+ RG+D++ + +V+N D P + Y+HR+GR GR G G+A TF
Sbjct: 454 FRSGRTPVLVATDVAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGRAGATGIAYTFFG 513
Query: 67 ---VSCATD-VDVLNNVQSRFEVDIKQL 90
A+D + +L R ++++L
Sbjct: 514 DQDAKHASDLIKILEGANQRVPPELREL 541
>Medtr0427s0010.1 | DEAD-box RNA helicase family protein | HC |
scaffold0427:505-2043 | 20130731
Length = 227
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 14/94 (14%)
Query: 4 KRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDS--------------ADTYLH 49
K K FK+G T +L++ D++ RG D ++VN+VIN+D+P + + Y H
Sbjct: 106 KMVKEFKDGSTGVLISNDVLARGFDQDQVNLVINYDLPLNYTAEITCGGKPELDCEVYFH 165
Query: 50 RVGRAGRFGTKGLAITFVSCATDVDVLNNVQSRF 83
RVGRAGRFG KG + D +++ +++ F
Sbjct: 166 RVGRAGRFGRKGAVFNLICDERDEKLMSKIENHF 199
>Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
FK +LVAT + RG+D++ + +VIN D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 796 FKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
FK +LVAT + RG+D++ + +VIN D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 796 FKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784007 | 20130731
Length = 1114
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
FK +LVAT + RG+D++ + +VIN D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 796 FKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
FK +LVAT + RG+D++ + +VIN D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 796 FKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC |
chr2:778249-784007 | 20130731
Length = 1114
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
FK +LVAT + RG+D++ + +VIN D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 796 FKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784023 | 20130731
Length = 1114
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
FK +LVAT + RG+D++ + +VIN D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 796 FKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
FK +LVAT + RG+D++ + +VIN D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 796 FKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
FK +LVAT + RG+D++ + +VIN D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 796 FKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
FK +LVAT + RG+D++ + +VIN D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 796 FKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC |
chr2:778234-784007 | 20130731
Length = 1114
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
FK +LVAT + RG+D++ + +VIN D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 796 FKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:8797246-8799070 | 20130731
Length = 591
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
FK G+ +LVATD+ +G+D + VIN+DMP + Y+HR+GR GR G G+A TF++
Sbjct: 443 FKTGKKDVLVATDIASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFIN 502
>Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:43124508-43126947 | 20130731
Length = 589
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
FK G+ +LVATD+ +G+D + VIN+DMP + Y+HR+GR GR G G+A TF++
Sbjct: 441 FKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFIN 500
>Medtr6g082080.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:30641167-30650711 | 20130731
Length = 438
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 14/89 (15%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
FK G IL+ TD+ RG+DI V++VIN+D+P ++ Y+HRVGR R G G+AI+ V
Sbjct: 296 FKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLV- 354
Query: 69 CATDVDVLNNVQSRFEVDI-----KQLPE 92
N + + V I K+LPE
Sbjct: 355 --------NQYELEWYVQIEKLIGKKLPE 375
>Medtr6g082080.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:30641166-30650890 | 20130731
Length = 438
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 14/89 (15%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
FK G IL+ TD+ RG+DI V++VIN+D+P ++ Y+HRVGR R G G+AI+ V
Sbjct: 296 FKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLV- 354
Query: 69 CATDVDVLNNVQSRFEVDI-----KQLPE 92
N + + V I K+LPE
Sbjct: 355 --------NQYELEWYVQIEKLIGKKLPE 375
>Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857732-27867387 | 20130731
Length = 561
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 66
F+ T ILVATD+ RG+D+ V+ VIN D+P + + Y+HR+GR GR G+ G+A +F
Sbjct: 415 FRSSSTSILVATDVASRGLDVTGVSHVINLDLPKTTEDYIHRIGRTGRAGSTGIATSF 472
>Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857806-27867020 | 20130731
Length = 530
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 66
F+ T ILVATD+ RG+D+ V+ VIN D+P + + Y+HR+GR GR G+ G+A +F
Sbjct: 384 FRSSSTSILVATDVASRGLDVTGVSHVINLDLPKTTEDYIHRIGRTGRAGSTGIATSF 441
>Medtr7g056830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:20527189-20518464 | 20130731
Length = 438
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 42/60 (70%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
FK G IL+ TD+ RG+DI V++VIN+D+P ++ Y+HRVGR R G G+AI+ V+
Sbjct: 296 FKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVN 355
>Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:39247084-39252313 | 20130731
Length = 590
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 8 GFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFV 67
GF+ G +LVATD+ RG+DI V++VI++++P++++ ++HR GR GR G KG AI V
Sbjct: 369 GFRNGHFNVLVATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAI-LV 427
Query: 68 SCATDVDVLNNVQSRFEVDIKQLPE-QIDTST 98
L ++ +LP+ +DT++
Sbjct: 428 YTQDQSRTLRTIERDVGCKFSELPKIAVDTAS 459
>Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr5:11616617-11610718 | 20130731
Length = 523
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
FK G +++ATD+ RG+DI V +VIN P + + Y+HR+GR GR G KG+A TF +
Sbjct: 398 FKNGSCPLMIATDVAARGLDIPDVEVVINFSFPLTLEDYVHRIGRTGRAGKKGVAHTFFT 457
>Medtr2g063080.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:26668487-26670676 | 20130731
Length = 552
Score = 63.9 bits (154), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 7 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 66
K FK G+ R+LV +L RG+D+ ++V+N D+P + Y HR GR GR G G +T
Sbjct: 450 KKFKNGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRNGTVLTI 509
Query: 67 VSCATDVDVLNNVQSRFEVDI 87
++V V+ ++ + E+ I
Sbjct: 510 CE-ESEVFVVRKLKKQLEIPI 529
>Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:20515753-20505772 | 20130731
Length = 798
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 2 KLKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKG 61
+LK F+E ILVATD+ RG+DI V V+++ +P SA+ Y+HR GR R +G
Sbjct: 514 RLKAMDRFRENDNGILVATDVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARASAEG 573
Query: 62 LAITFVSCATDVDVLNNVQSRFEVDIKQLPEQIDTSTYMP 101
+I +S + +S + + ++ P + ++YMP
Sbjct: 574 CSIALISPKETSKFASLCKSFSKDNFQRFPVE---NSYMP 610
>Medtr1g022305.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:7041752-7035027 | 20130731
Length = 462
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 2 KLKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKG 61
+L+ FK G +IL+ DL RG+DI V+ VIN+D+PD Y+H VG+A G
Sbjct: 226 RLEALNAFKSGNCKILLCNDLASRGLDIPAVDTVINYDIPDDPRDYMHHVGQA---APTG 282
Query: 62 LAITFVS 68
+AI+FVS
Sbjct: 283 VAISFVS 289
>Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688386-16681429 | 20130731
Length = 579
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 8 GFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFV 67
GF+ +LVATD+ RG+DI V++VI++++P++++ ++HR GR GR G KG AI
Sbjct: 378 GFRNSYFNVLVATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVH 437
Query: 68 SCATDVDVLNNVQSRFEVDIKQLPE 92
+ DV ++ K+LP+
Sbjct: 438 TENQSRDV-KTIERDVGCKFKELPK 461
>Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688391-16681206 | 20130731
Length = 558
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 8 GFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFV 67
GF+ +LVATD+ RG+DI V++VI++++P++++ ++HR GR GR G KG AI
Sbjct: 378 GFRNSYFNVLVATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVH 437
Query: 68 SCATDVDVLNNVQSRFEVDIKQLPE 92
+ DV ++ K+LP+
Sbjct: 438 TENQSRDV-KTIERDVGCKFKELPK 461
>Medtr4g059460.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:21899223-21892509 | 20130731
Length = 613
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 6 YKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAIT 65
++ FK ++ +L++TD+ RG+D V +I +D P A Y+HRVGR R G +G ++
Sbjct: 404 FQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATEYVHRVGRTARLGERGESLL 463
Query: 66 FVSCATDVDVLNNVQ 80
F+ +++D L +++
Sbjct: 464 FLQ-PSEIDYLQDLE 477
>Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:10401560-10398230 | 20130731
Length = 538
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 7 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 66
+ F G+ ++VAT ++GRG+D+ V VI DMP+S + Y+H++GRA R G +G AI F
Sbjct: 430 QSFMVGEFPVVVATGVLGRGVDLLGVRQVIVFDMPNSINEYVHQIGRASRMGEEGQAIVF 489
Query: 67 VS 68
V+
Sbjct: 490 VN 491
>Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:18030127-18021965 | 20130731
Length = 747
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 2 KLKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKG 61
+L + F++ Q LVATD+ RG+DI V VIN P +Y+HRVGR R G G
Sbjct: 425 RLDALEQFRKQQVDFLVATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGRAG 484
Query: 62 LAITFVSCATDVDVLNNVQSR 82
A+TFV+ +D +L + R
Sbjct: 485 SAVTFVT-DSDRSLLKAIAKR 504
>Medtr2g043360.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:18890321-18881902 | 20130731
Length = 610
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 6 YKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAIT 65
++ FK ++ +L++TD+ RG+D V +I +D P A Y+HRVGR R G +G ++
Sbjct: 401 FQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATEYVHRVGRTARLGERGESLL 460
Query: 66 FVSCATDVDVLNNVQSRFEVDIKQLP 91
F+ ++++ L +++ + V + + P
Sbjct: 461 FLQ-PSEIEYLQDLE-KHGVSLAEYP 484
>Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:44909506-44914537 | 20130731
Length = 775
Score = 58.9 bits (141), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTK-GLAITFV 67
FK G +L+ATD+ RG+DI+ + V+N D+ D ++HR+GR GR G K G+A T +
Sbjct: 522 FKSGAYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLI 581
Query: 68 S 68
+
Sbjct: 582 T 582
>Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:19680414-19670656 | 20130731
Length = 760
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 40/67 (59%)
Query: 2 KLKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKG 61
+L + F++ Q LVATD+ RG+DI V VIN P +Y+HRVGR R G G
Sbjct: 435 RLGALEEFRKQQVDFLVATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGRAG 494
Query: 62 LAITFVS 68
A+TFV+
Sbjct: 495 SAVTFVT 501
>Medtr2g043360.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:18890320-18881902 | 20130731
Length = 492
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 6 YKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAIT 65
++ FK ++ +L++TD+ RG+D V +I +D P A Y+HRVGR R G +G ++
Sbjct: 283 FQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATEYVHRVGRTARLGERGESLL 342
Query: 66 FVSCATDVDVLNNVQSRFEVDIKQLP 91
F+ ++++ L +++ + V + + P
Sbjct: 343 FLQ-PSEIEYLQDLE-KHGVSLAEYP 366
>Medtr6g056080.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:20125418-20119486 | 20130731
Length = 681
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 7 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 66
KGF+ G+ LVAT++ RG+DI V ++I + P + Y+HR GR GR G G+A+
Sbjct: 396 KGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVML 455
>Medtr4g079320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:30630772-30640503 | 20130731
Length = 787
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
F+ +T +L+ TD+ RGIDI ++ VIN D P ++HRVGR R G G A +F++
Sbjct: 307 FRSRKTMLLIVTDIAARGIDIPLLDNVINWDFPPKPKIFVHRVGRVARAGRTGTAYSFLT 366
Query: 69 CATDVDVLNNVQSRFEVDIKQLPEQ 93
A D+ L ++ +K P +
Sbjct: 367 -AEDMAYLLDLHLFLSKPVKAAPTE 390
>Medtr1g046570.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:17543999-17545772 | 20130731
Length = 398
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Query: 10 KEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVG-RAGRFGTKGLAITFVS 68
+ G +L+ TD + G D+ +V++++N+D+P + + YL+R+G R+G+FG + +AI F++
Sbjct: 311 QSGSPHVLITTDPLVCGTDVHKVSLIVNYDLPAAPENYLYRIGRRSGQFG-RCVAINFMT 369
Query: 69 CATDVDVLNNVQSRFEVDIKQLPEQID 95
+ ++ ++Q + + I++LP D
Sbjct: 370 -KDEATMIIDIQKFYNMVIEELPYNFD 395
>Medtr1g102410.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:46249372-46245255 | 20130731
Length = 641
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 8 GFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 66
GF+ G+ LVAT++ RG+DI V ++I + P + Y+HR GR GR G G+A+
Sbjct: 354 GFRYGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVML 412
>Medtr5g077690.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr5:33157541-33150855 | 20130731
Length = 497
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
F++G ++L+++D + RG+D+E V VIN+D+P T++HR GR R G G T +S
Sbjct: 382 FRKGVFQVLLSSDALTRGMDVEGVRNVINYDVPKFIKTHVHRAGRTARAGQTGRCFTLMS 441
>Medtr3g071620.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:32167186-32161537 | 20130731
Length = 589
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 16 ILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFV 67
IL+ TD+ RG+DI V+ ++ +D P + ++HRVGR R G +G A+ F+
Sbjct: 333 ILLCTDVAARGLDIPGVDCIVQYDPPQDPNVFVHRVGRTARLGKQGHAVVFL 384
>Medtr2g088350.1 | helicase family carboxy-terminal domain protein |
LC | chr2:37222042-37223590 | 20130731
Length = 184
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Query: 9 FKEGQTRILV--ATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRF 57
+K+ RI+V A DL GI+I+ VN+VIN D P +++TYLHRVG +GRF
Sbjct: 130 WKKLAYRIVVQFALDLSRGGINIQAVNVVINFDFPKNSETYLHRVGWSGRF 180
>Medtr8g018350.1 | eukaryotic translation initiation factor 4A1 | HC
| chr8:6234340-6233617 | 20130731
Length = 176
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 55/89 (61%), Gaps = 6/89 (6%)
Query: 3 LKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGL 62
++R F+ G ++L+ TD + G D+ + ++V+N+D+P + YL+ +GR+G+F
Sbjct: 87 IEREFLFESGSPQVLITTDPLVCGTDLHKASLVVNYDLPTVPENYLNHIGRSGKF----- 141
Query: 63 AITFVSCATDVDVLNNVQSRFEVDIKQLP 91
AI F+ + ++L ++Q + + I++LP
Sbjct: 142 AINFM-IEDEANMLIDIQKFYNMVIEELP 169
>Medtr5g069330.1 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 417
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 2 KLKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKG 61
KL FK G+ IL+ ++ RG+DI V++VIN+++P + Y+HRVG G
Sbjct: 285 KLGALNAFKSGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTGHVNA-- 342
Query: 62 LAITFVS 68
AI+FV+
Sbjct: 343 -AISFVN 348
>Medtr5g069330.4 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382212-29375908 | 20130731
Length = 417
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 2 KLKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKG 61
KL FK G+ IL+ ++ RG+DI V++VIN+++P + Y+HRVG G
Sbjct: 285 KLGALNAFKSGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTGHVNA-- 342
Query: 62 LAITFVS 68
AI+FV+
Sbjct: 343 -AISFVN 348
>Medtr5g069330.2 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 417
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 2 KLKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKG 61
KL FK G+ IL+ ++ RG+DI V++VIN+++P + Y+HRVG G
Sbjct: 285 KLGALNAFKSGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTGHVNA-- 342
Query: 62 LAITFVS 68
AI+FV+
Sbjct: 343 -AISFVN 348
>Medtr5g069330.3 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 421
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 2 KLKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKG 61
KL FK G+ IL+ ++ RG+DI V++VIN+++P + Y+HRVG G
Sbjct: 289 KLGALNAFKSGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTGHVNA-- 346
Query: 62 LAITFVS 68
AI+FV+
Sbjct: 347 -AISFVN 352
>Medtr5g069330.5 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 421
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 2 KLKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKG 61
KL FK G+ IL+ ++ RG+DI V++VIN+++P + Y+HRVG G
Sbjct: 289 KLGALNAFKSGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTGHVNA-- 346
Query: 62 LAITFVS 68
AI+FV+
Sbjct: 347 -AISFVN 352
>Medtr8g097000.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:40729630-40725252 | 20130731
Length = 756
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
FKE + ILV++D+ RG++ V +VI +P + Y+HR+GR GR G +G I ++
Sbjct: 591 FKESKQMILVSSDVTSRGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKEGKGILLIA 650
Query: 69 CATDVDVLNNVQSRFEVDIKQLP 91
+ F +IK LP
Sbjct: 651 PWEEY---------FLNEIKDLP 664
>Medtr5g092560.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:40426461-40421694 | 20130731
Length = 536
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 6 YKGFKEGQTRILVATDLVGRGIDIER-VNIVINHDMPDSADTYLHRVGRAGRFGTKGLAI 64
Y F E + +L +TD+ RG+D + V+ V+ D P++ +Y+HRVGR R+ + G ++
Sbjct: 154 YSEFCEEKRSVLFSTDVAARGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYNSVGKSV 213
Query: 65 TFV 67
F+
Sbjct: 214 LFL 216
>Medtr1g023070.1 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 177
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 2 KLKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKG 61
KL K G+ IL+ +D V +G+DI V++VIN+++P S + Y++RVG
Sbjct: 42 KLGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPNDYIYRVGWT--VAHVN 99
Query: 62 LAITFVS 68
+AI+FVS
Sbjct: 100 VAISFVS 106
>Medtr1g023070.3 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 177
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 2 KLKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKG 61
KL K G+ IL+ +D V +G+DI V++VIN+++P S + Y++RVG
Sbjct: 42 KLGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPNDYIYRVGWT--VAHVN 99
Query: 62 LAITFVS 68
+AI+FVS
Sbjct: 100 VAISFVS 106
>Medtr2g055850.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:23956977-23948909 | 20130731
Length = 557
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 20/96 (20%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGR-FGTKGLAITFV 67
F + + IL+ TD+ RG+DI V+ ++ D PD Y+HRVGR R G KG A+ F+
Sbjct: 383 FCKAEKGILLCTDVAARGLDIPAVDWIVQFDPPDEPKEYIHRVGRTARGEGGKGNALLFL 442
Query: 68 -------------------SCATDVDVLNNVQSRFE 84
A D L+NVQS+ E
Sbjct: 443 IPEELQFLRYLKAAKVPVKEYAFDDKKLSNVQSQLE 478
>Medtr1g023070.2 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 206
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 2 KLKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKG 61
KL K G+ IL+ +D V +G+DI V++VIN+++P S + Y++RVG
Sbjct: 42 KLGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPNDYIYRVGWT--VAHVN 99
Query: 62 LAITFVS 68
+AI+FVS
Sbjct: 100 VAISFVS 106
>Medtr1g023070.4 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 206
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 2 KLKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKG 61
KL K G+ IL+ +D V +G+DI V++VIN+++P S + Y++RVG
Sbjct: 42 KLGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPNDYIYRVGWT--VAHVN 99
Query: 62 LAITFVS 68
+AI+FVS
Sbjct: 100 VAISFVS 106
>Medtr5g092560.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:40427970-40421694 | 20130731
Length = 747
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 6 YKGFKEGQTRILVATDLVGRGIDIER-VNIVINHDMPDSADTYLHRVGRAGRFGTKGLAI 64
Y F E + +L +TD+ RG+D + V+ V+ D P++ +Y+HRVGR R+ + G ++
Sbjct: 365 YSEFCEEKRSVLFSTDVAARGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYNSVGKSV 424
Query: 65 TFV 67
F+
Sbjct: 425 LFL 427
>Medtr1g009617.1 | DEAD-box ATP-dependent RNA helicase-like protein
| LC | chr1:1383737-1377649 | 20130731
Length = 400
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 2 KLKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKG 61
KL+ FK G+ IL+ +D + +G+DI V++VIN+++P Y++RVG
Sbjct: 183 KLRSLNAFKSGEYNILLCSDFLSKGLDIPAVDMVINYNIPRYPKDYIYRVGWTA--AHVN 240
Query: 62 LAITFVS 68
+AI+FVS
Sbjct: 241 VAISFVS 247
>Medtr4g112320.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46124357-46130061 | 20130731
Length = 401
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGR-FGTKGLAITFV 67
F + + IL+ TD+ RG+DI V+ ++ +D PD Y+HRVGR R KG A+ F+
Sbjct: 208 FCQAEKGILLCTDVAARGLDIPSVDWILQYDPPDEPKEYIHRVGRTARGEDGKGNALLFL 267
>Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10120030-10127066 | 20130731
Length = 573
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
F++ + ILV +D+ RG+D V++V+ +P + Y+HR+GR GR G +G I ++
Sbjct: 409 FRKSKRLILVTSDVSARGVDYPDVSLVVQLGIPADKELYIHRLGRTGRIGKEGKGILLLA 468
>Medtr4g112340.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46109502-46117199 | 20130731
Length = 583
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGR-FGTKGLAITFV 67
F + + IL+ TD+ RG+DI V+ ++ +D PD Y+HRVGR R KG A+ F+
Sbjct: 390 FCQAEKGILLCTDVAARGLDIPSVDWILQYDPPDEPKEYIHRVGRTARGEDGKGNALLFL 449
>Medtr8g079462.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr8:34021263-34013553 | 20130731
Length = 313
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
F++G ++L+++D + R +D+E V VIN+D+P TY+HR GR R G T +S
Sbjct: 198 FRKGVFQVLLSSDALTREMDVEGVRNVINYDVPKFIKTYVHRAGRTARAVQTGRCFTLMS 257
>Medtr8g079452.1 | helicase family carboxy-terminal domain protein
| HC | chr8:34005644-34004777 | 20130731
Length = 113
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
F++G ++L+++D + R +D+E V VIN+D+P TY+HR GR R G T +S
Sbjct: 29 FRKGVFQVLLSSDALTRVMDVEGVRNVINYDVPKFIKTYVHRAGRTARAVQTGRCFTLMS 88
>Medtr1g083130.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:37010922-37003111 | 20130731
Length = 604
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 23 VGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVSCATDVDVLNNVQS 81
V RGID + V VIN +MP S Y+HR+GR GR + G +I+ VS ++D V+S
Sbjct: 373 VVRGIDFKNVYTVINFEMPRSVTGYVHRIGRTGRAYSSGTSISLVS-TDEMDTFEEVRS 430
>Medtr4g068990.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:25903244-25908935 | 20130731
Length = 752
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 6 YKGFKEGQTRILVATDLVGRGIDIER-VNIVINHDMPDSADTYLHRVGRAGRFGTKGLAI 64
Y F E + IL ATD+ RG+D R V+ V+ D P++ +Y+HRVGR R+ + G ++
Sbjct: 365 YSEFCE-KCSILFATDVAARGLDFNRAVDWVVQVDCPENVASYIHRVGRTARYKSLGKSV 423
Query: 65 TFV 67
++
Sbjct: 424 LYL 426
>Medtr8g042690.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr8:16475815-16482952 | 20130731
Length = 462
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 4 KRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLA 63
K Y F + IL+ T++ G++I V++++ +D P + Y+H+VGR R KG A
Sbjct: 306 KIYYSFSNAEEMILLCTNIAAFGLNIPDVDLIVQYDPPIDPEEYIHKVGRTARGTRKGNA 365
Query: 64 ITFV 67
+ F+
Sbjct: 366 LLFL 369
>Medtr8g018330.1 | eukaryotic translation initiation factor 4A1 | LC
| chr8:6227164-6226359 | 20130731
Length = 177
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 10 KEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVSC 69
+ ++L+ TD G D+ + ++++N+D+P + YLHR+GR+ +F AI F++
Sbjct: 95 QSSSPQVLITTDPQLCGADVHKASLIVNYDLPTVPENYLHRIGRSEKF-----AINFMT- 148
Query: 70 ATDVDVLNNVQSRFEVDIKQLP 91
+ ++ ++Q + + I++LP
Sbjct: 149 EDETSMIIDIQKFYNMVIEELP 170
>Medtr8g027775.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10113462-10118856 | 20130731
Length = 569
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
F++ + ILV +D+ RG+D V++V+ +P Y+HR+GR GR G +G I ++
Sbjct: 405 FRKSKRLILVTSDVSARGVDYPDVSLVVQVGLPADKQQYIHRLGRTGRKGKEGKGILLLA 464
>Medtr8g027770.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10111776-10105760 | 20130731
Length = 668
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 9 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAIT--- 65
F++ + ILV +D+ RG+D V +V+ +P Y+HR+GR GR G +G I
Sbjct: 504 FRKSKGLILVTSDVSARGVDYPDVTLVVQVGLPADKQQYIHRLGRTGRKGKEGQGILLLA 563
Query: 66 -----FVSCATDVDVLNNVQSRFEVDIKQLPEQIDTSTYM 100
F++ A D+ ++ + D K+ E+ ++ M
Sbjct: 564 PWEEFFLATAKDLPIVKAPVPLVDPDTKKKVERALSNVEM 603
>Medtr4g131750.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:54963018-54968467 | 20130731
Length = 480
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 10 KEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGR 56
++G +LVATD+ RG+D + + N+D+P +A YLHR GR R
Sbjct: 396 RKGGGYLLVATDVAARGVDFPEMTHIYNYDLPKTAIDYLHRAGRTCR 442
>Medtr8g062720.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:26237354-26229767 | 20130731
Length = 594
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 16 ILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGL 62
+LV TD RG+DI V+ VI D SA +LHR+GR R G GL
Sbjct: 487 VLVCTDAAARGVDIPNVSHVIQADFATSAVDFLHRIGRTARAGQIGL 533
>Medtr4g068990.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:25904178-25909316 | 20130731
Length = 535
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 2 KLKRYKGFKEGQTRILVATDLVGRGIDIER-VNIVINHDMPDSADTYLHRVGRAGRFGTK 60
++ Y F E + IL ATD+ RG+D R V+ V+ D P++ +Y+HRVGR R+ +
Sbjct: 150 RMAIYSEFCE-KCSILFATDVAARGLDFNRAVDWVVQVDCPENVASYIHRVGRTARYKSL 208
Query: 61 GLAITFV 67
G ++ ++
Sbjct: 209 GKSVLYL 215
>Medtr6g039840.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:14348848-14341230 | 20130731
Length = 508
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 17 LVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
LV TDL RG+D++ V+ VI D P ++ YLHR GR R G KG + V+
Sbjct: 247 LVCTDLAARGLDLD-VDHVIMFDFPLNSIDYLHRTGRTARMGAKGKITSLVT 297
>Medtr6g039840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:14348854-14341230 | 20130731
Length = 684
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 17 LVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 68
LV TDL RG+D++ V+ VI D P ++ YLHR GR R G KG + V+
Sbjct: 423 LVCTDLAARGLDLD-VDHVIMFDFPLNSIDYLHRTGRTARMGAKGKITSLVT 473