Miyakogusa Predicted Gene

Lj5g3v0529490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0529490.1 Non Chatacterized Hit- tr|I1J7C1|I1J7C1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,83.72,0.000000000003,
,97464_g.1
         (43 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g29320.1                                                        76   9e-15
Glyma01g16600.1                                                        54   3e-08
Glyma05g10880.1                                                        50   6e-07

>Glyma01g29320.1 
          Length = 989

 Score = 75.9 bits (185), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 36/43 (83%), Positives = 37/43 (86%)

Query: 1   MEPNLKLQRAETENMVDKRRYQRLVGRLISLSHTHPYIVFAIS 43
           MEPNLKLQ AETENMVDK RYQRLVGRLI LSHT P I FA+S
Sbjct: 786 MEPNLKLQSAETENMVDKGRYQRLVGRLIYLSHTRPDIAFAVS 828


>Glyma01g16600.1 
          Length = 2962

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/43 (60%), Positives = 31/43 (72%)

Query: 1   MEPNLKLQRAETENMVDKRRYQRLVGRLISLSHTHPYIVFAIS 43
           ++PN+KL  AE +  VDK  YQRLV RLI LSHT P I FA+S
Sbjct: 864 IDPNIKLGSAEEDIAVDKEMYQRLVDRLIYLSHTTPDIAFAVS 906


>Glyma05g10880.1 
          Length = 986

 Score = 49.7 bits (117), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/43 (53%), Positives = 30/43 (69%)

Query: 1   MEPNLKLQRAETENMVDKRRYQRLVGRLISLSHTHPYIVFAIS 43
           ++PN KL+  +  + VD  RYQRLVGRLI LS+T P I F +S
Sbjct: 619 IDPNQKLRSEDKGDPVDTTRYQRLVGRLIYLSYTRPNIAFVVS 661