Miyakogusa Predicted Gene

Lj5g3v0409270.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0409270.1 Non Characterized Hit- tr|I3S380|I3S380_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.68,0,NAD
DEHYDROGENASE,NULL; FAD NAD BINDING OXIDOREDUCTASES,NULL; no
description,NULL; DAO,FAD dependent,CUFF.52967.1
         (338 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g026730.1 | FAD-dependent oxidoreductase | HC | chr6:90232...   476   e-134

>Medtr6g026730.1 | FAD-dependent oxidoreductase | HC |
           chr6:9023218-9028365 | 20130731
          Length = 458

 Score =  476 bits (1226), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 239/356 (67%), Positives = 267/356 (75%), Gaps = 18/356 (5%)

Query: 1   MLKGTFQSL-----VLVSASRRNHVHVKWKHLFGNCARSMSSNETGRRIMD--------- 46
           MLK T Q+L        S   R+HVH+KW + F N  R++ S                  
Sbjct: 1   MLKKTIQTLEQFKSSSSSTRTRDHVHMKWNNPFNNWVRNIRSTTQNDTNTTTSYPVSRET 60

Query: 47  ----SVPREKVDCXXXXXXXXXXXXXXXXXXKGREVLVIEXXXXXXXXXXXRNSEVIHAG 102
               SVPRE+VDC                  KGREV+VIE           RNSEV+HAG
Sbjct: 61  TTSYSVPRERVDCVVIGAGVVGIAVARALALKGREVIVIESAPSFGTGTSSRNSEVVHAG 120

Query: 103 IYYPRDSLKAIFCVRGREMLYEYCSMHDIPHKQVGKLIVATRSSEIPKLNDILNHGIQNG 162
           IYYP  SLKAIFCV+GREMLYEYC+ HDIPH+Q GKLIVATRSSEIPKL+ ILNHGIQNG
Sbjct: 121 IYYPHHSLKAIFCVKGREMLYEYCAKHDIPHEQTGKLIVATRSSEIPKLSVILNHGIQNG 180

Query: 163 VDSLEMINGAKAMKMEPELQCVKAILSPLSGIVDSHSLMLSLVGEAENHRTTFTYNSTVI 222
           VD L+M++G  AMKMEPELQCVKAILSPLSGIVDSHSLMLSLVGEAENH  TFTYNSTVI
Sbjct: 181 VDGLKMMDGVDAMKMEPELQCVKAILSPLSGIVDSHSLMLSLVGEAENHGATFTYNSTVI 240

Query: 223 GGHLEGKEICLHILETKCLKEWDGTSILHPELILVPKLLVNSTGLSAPALAKRFTSLQSE 282
           GGH+EG EICLH+ ETK LKEW+G S L PEL+L+PKL+VNS GLSA ALAKRFT L+++
Sbjct: 241 GGHMEGNEICLHVSETKSLKEWNGKSSLQPELVLIPKLVVNSAGLSALALAKRFTGLENK 300

Query: 283 VIPPSYYARGCYFTLSDTKASPFRHLIYPIPEDGGLGVHVTLDLNGQIKFGPDVEW 338
           VIPP+YYARGCYFTLS+TKASPFRHLIYPIPEDGGLGVHVTLDLNGQ+KFGPDVEW
Sbjct: 301 VIPPAYYARGCYFTLSNTKASPFRHLIYPIPEDGGLGVHVTLDLNGQVKFGPDVEW 356