Miyakogusa Predicted Gene

Lj5g3v0310150.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0310150.1 Non Characterized Hit- tr|H3I2N0|H3I2N0_STRPU
Uncharacterized protein OS=Strongylocentrotus purpurat,29.74,3e-17,ARM
repeat,Armadillo-type fold; INTERFERON-RELATED DEVELOPMENTAL REGULATOR
FAMILY PROTEIN,NULL; INTE,CUFF.52844.1
         (447 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g103090.1 | interferon-related developmental regulator-lik...   623   e-178
Medtr3g103090.2 | interferon-related developmental regulator-lik...   562   e-160

>Medtr3g103090.1 | interferon-related developmental regulator-like
           protein | HC | chr3:47512716-47517173 | 20130731
          Length = 443

 Score =  623 bits (1607), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 320/444 (72%), Positives = 360/444 (81%), Gaps = 6/444 (1%)

Query: 1   MGKRNSQRKNAAMLXXXXXXXXXXXXXXXXXXXXXXGTQEVHFXXXXXXXXXXXXXXEKR 60
           MGKRNS+ K AAM                       GT++V F              EKR
Sbjct: 1   MGKRNSRTKAAAMFDSDDDSSVTSSSTAPSDLMAVSGTEDVQFDQESVLDQALDALDEKR 60

Query: 61  GSTREKAFSLIIGAFKSNMQHQFVDKKFATLLHQCLASIKRGSKQASAKEVALASHVIGL 120
           G+TRE AFS II AFKSNMQHQFV+KKFATLLH CLASIK+GSK+AS+KE+ LASH IG 
Sbjct: 61  GTTRENAFSAIIDAFKSNMQHQFVEKKFATLLHSCLASIKKGSKKASSKEITLASHAIGC 120

Query: 121 LALTVECGDNAREIFEESIRPLDEFLTSKSDSIKVPSLLECLAIITFVGGNNQEETERSM 180
           LALTV C DNAREIFEES+ PLDE L ++S +I   SL++CLAIITFVGGN+QEETERSM
Sbjct: 121 LALTVGCSDNAREIFEESVTPLDESL-ARSKNI---SLMDCLAIITFVGGNDQEETERSM 176

Query: 181 DIMWRVIHPKLGSNVVTVKPSAPLITTVVSAWSFLLSTMSELKLNSKNWQNSISYLSSLL 240
           DIMWRVIHPKLGSNVV VKPSA LIT VVSAWSFLLST+  LKLNSK+WQ+SI+YLS LL
Sbjct: 177 DIMWRVIHPKLGSNVVAVKPSAQLITAVVSAWSFLLSTVGNLKLNSKHWQSSIAYLSGLL 236

Query: 241 DKEDRPVRIAAGKALALIFEIGVMEKLS--ANSISAMTREESKPQESYIHLQGLKGKVIT 298
           DKEDR VRIAAG+ALALIFEIGV++K S  A + S  T+EESKPQESYI LQGLKGKVI 
Sbjct: 237 DKEDRSVRIAAGEALALIFEIGVIDKFSTEAKNASDATQEESKPQESYIFLQGLKGKVIN 296

Query: 299 QVKNLSVEAGGKGSAKKDLNHQRSVFRDIVEFFEYGYTPEISMKIGGDSLQTSSWSQVIQ 358
           Q KNLSVEAGGKGSAKKDLN QR++FRDI++FFE GY PEISMKIGGDSLQTSSWSQ+IQ
Sbjct: 297 QCKNLSVEAGGKGSAKKDLNSQRNLFRDILDFFEDGYAPEISMKIGGDSLQTSSWSQMIQ 356

Query: 359 LNFIRHFLGGGFIKHMQENEFLHDVFGFTPRRRYLNNNEPRMSSGEKRMFKSPNSPQSKA 418
           LNFI+HFLGGGFIKHMQ+N+FLHDVFGF+P+++YLNN E RMS GEKRMFKSPNS  +KA
Sbjct: 357 LNFIKHFLGGGFIKHMQDNDFLHDVFGFSPKKKYLNNGEHRMSGGEKRMFKSPNSVLNKA 416

Query: 419 RTQFLNKQRLLSEGRNFGHYAANV 442
           RTQ LNKQRL SEGRNFGHY+ N+
Sbjct: 417 RTQLLNKQRLQSEGRNFGHYSVNM 440


>Medtr3g103090.2 | interferon-related developmental regulator-like
           protein | HC | chr3:47512810-47517147 | 20130731
          Length = 409

 Score =  562 bits (1449), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 291/407 (71%), Positives = 328/407 (80%), Gaps = 6/407 (1%)

Query: 1   MGKRNSQRKNAAMLXXXXXXXXXXXXXXXXXXXXXXGTQEVHFXXXXXXXXXXXXXXEKR 60
           MGKRNS+ K AAM                       GT++V F              EKR
Sbjct: 1   MGKRNSRTKAAAMFDSDDDSSVTSSSTAPSDLMAVSGTEDVQFDQESVLDQALDALDEKR 60

Query: 61  GSTREKAFSLIIGAFKSNMQHQFVDKKFATLLHQCLASIKRGSKQASAKEVALASHVIGL 120
           G+TRE AFS II AFKSNMQHQFV+KKFATLLH CLASIK+GSK+AS+KE+ LASH IG 
Sbjct: 61  GTTRENAFSAIIDAFKSNMQHQFVEKKFATLLHSCLASIKKGSKKASSKEITLASHAIGC 120

Query: 121 LALTVECGDNAREIFEESIRPLDEFLTSKSDSIKVPSLLECLAIITFVGGNNQEETERSM 180
           LALTV C DNAREIFEES+ PLDE L ++S +I   SL++CLAIITFVGGN+QEETERSM
Sbjct: 121 LALTVGCSDNAREIFEESVTPLDESL-ARSKNI---SLMDCLAIITFVGGNDQEETERSM 176

Query: 181 DIMWRVIHPKLGSNVVTVKPSAPLITTVVSAWSFLLSTMSELKLNSKNWQNSISYLSSLL 240
           DIMWRVIHPKLGSNVV VKPSA LIT VVSAWSFLLST+  LKLNSK+WQ+SI+YLS LL
Sbjct: 177 DIMWRVIHPKLGSNVVAVKPSAQLITAVVSAWSFLLSTVGNLKLNSKHWQSSIAYLSGLL 236

Query: 241 DKEDRPVRIAAGKALALIFEIGVMEKLS--ANSISAMTREESKPQESYIHLQGLKGKVIT 298
           DKEDR VRIAAG+ALALIFEIGV++K S  A + S  T+EESKPQESYI LQGLKGKVI 
Sbjct: 237 DKEDRSVRIAAGEALALIFEIGVIDKFSTEAKNASDATQEESKPQESYIFLQGLKGKVIN 296

Query: 299 QVKNLSVEAGGKGSAKKDLNHQRSVFRDIVEFFEYGYTPEISMKIGGDSLQTSSWSQVIQ 358
           Q KNLSVEAGGKGSAKKDLN QR++FRDI++FFE GY PEISMKIGGDSLQTSSWSQ+IQ
Sbjct: 297 QCKNLSVEAGGKGSAKKDLNSQRNLFRDILDFFEDGYAPEISMKIGGDSLQTSSWSQMIQ 356

Query: 359 LNFIRHFLGGGFIKHMQENEFLHDVFGFTPRRRYLNNNEPRMSSGEK 405
           LNFI+HFLGGGFIKHMQ+N+FLHDVFGF+P+++YLNN E RMS GEK
Sbjct: 357 LNFIKHFLGGGFIKHMQDNDFLHDVFGFSPKKKYLNNGEHRMSGGEK 403