Miyakogusa Predicted Gene
- Lj5g3v0310150.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0310150.1 Non Chatacterized Hit- tr|H3I2N0|H3I2N0_STRPU
Uncharacterized protein OS=Strongylocentrotus purpurat,29.74,3e-17,ARM
repeat,Armadillo-type fold; INTERFERON-RELATED DEVELOPMENTAL REGULATOR
FAMILY PROTEIN,NULL; INTE,CUFF.52844.1
(1347 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58636 similar to UniRef100_Q9SFY3 Cluster: T22C5.21; ... 1013 0.0
gnl|LJGI|TC65403 similar to UniRef100_A7NU85 Cluster: Chromosome... 773 0.0
gnl|LJGI|TC66242 similar to UniRef100_A7NU85 Cluster: Chromosome... 238 7e-62
gnl|LJGI|TC64388 weakly similar to UniRef100_A7NU85 Cluster: Chr... 178 6e-44
gnl|LJGI|AW163921 similar to UniRef100_A7NU85 Cluster: Chromosom... 174 9e-43
gnl|LJGI|GO025125 similar to UniRef100_A7NU85 Cluster: Chromosom... 98 2e-19
gnl|LJGI|TC78140 similar to UniRef100_A7NU85 Cluster: Chromosome... 72 1e-11
>gnl|LJGI|TC58636 similar to UniRef100_Q9SFY3 Cluster: T22C5.21; n=1; Arabidopsis
thaliana|Rep: T22C5.21 - Arabidopsis thaliana (Mouse-ear
cress), partial (17%)
Length = 832
Score = 1013 bits (511), Expect = 0.0
Identities = 511/511 (100%)
Strand = Plus / Plus
Query: 1 atgggaaagcgtaactctcaacgtaaaaatgctgcaatgttggatagtgatgatgatatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 atgggaaagcgtaactctcaacgtaaaaatgctgcaatgttggatagtgatgatgatatc 373
Query: 61 agtgtgagttcttcaccaacttctcgaaccggtcgcgtgtcggtgtctgggactcaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 agtgtgagttcttcaccaacttctcgaaccggtcgcgtgtcggtgtctgggactcaagaa 433
Query: 121 gtgcactttgatcaagattatctgcttgaccaagctcttgatgctttagatgagaaaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gtgcactttgatcaagattatctgcttgaccaagctcttgatgctttagatgagaaaagg 493
Query: 181 ggttctacgagggagaaagctttttcattgatcattggggctttcaagagcaatatgcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ggttctacgagggagaaagctttttcattgatcattggggctttcaagagcaatatgcag 553
Query: 241 catcaatttgttgacaaaaaatttgccaccttattacatcagtgtcttgcttcaataaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 catcaatttgttgacaaaaaatttgccaccttattacatcagtgtcttgcttcaataaaa 613
Query: 301 agaggttccaaacaggcatctgcaaaggaggtagctttggcatctcatgtcatcggtttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 agaggttccaaacaggcatctgcaaaggaggtagctttggcatctcatgtcatcggtttg 673
Query: 361 ttggccctcactgttgaatgtggtgataatgcacgtgaaatatttgaggaatcaattcgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ttggccctcactgttgaatgtggtgataatgcacgtgaaatatttgaggaatcaattcgt 733
Query: 421 cctctagatgaatttctcacatctaaatcagattcgataaaggttccatcattgctggag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 cctctagatgaatttctcacatctaaatcagattcgataaaggttccatcattgctggag 793
Query: 481 tgcttggctataatcacttttgttggtggga 511
|||||||||||||||||||||||||||||||
Sbjct: 794 tgcttggctataatcacttttgttggtggga 824
>gnl|LJGI|TC65403 similar to UniRef100_A7NU85 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 663
Score = 773 bits (390), Expect = 0.0
Identities = 390/390 (100%)
Strand = Plus / Plus
Query: 958 cagaggagcgtgttccgagatatcgtggagttttttgagtatggttacactcctgaaatt 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagaggagcgtgttccgagatatcgtggagttttttgagtatggttacactcctgaaatt 60
Query: 1018 tctatgaagattggcggtgattcactgcaaacatcttcatggtcccaagtgatacagtta 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctatgaagattggcggtgattcactgcaaacatcttcatggtcccaagtgatacagtta 120
Query: 1078 aactttatcaggcactttctagggggtggtttcatcaagcatatgcaggaaaacgaattc 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aactttatcaggcactttctagggggtggtttcatcaagcatatgcaggaaaacgaattc 180
Query: 1138 cttcatgatgtctttggtttcacaccaagaagaagatatcttaataacaatgaacctcga 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttcatgatgtctttggtttcacaccaagaagaagatatcttaataacaatgaacctcga 240
Query: 1198 atgtctagtggtgagaagagaatgttcaagtctccaaattcgcctcagagtaaggctagg 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgtctagtggtgagaagagaatgttcaagtctccaaattcgcctcagagtaaggctagg 300
Query: 1258 acccagtttcttaataagcaacggctgttatctgagggcagaaactttggtcactatgca 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acccagtttcttaataagcaacggctgttatctgagggcagaaactttggtcactatgca 360
Query: 1318 gccaatgtggttgatgatgcgttttgagtg 1347
||||||||||||||||||||||||||||||
Sbjct: 361 gccaatgtggttgatgatgcgttttgagtg 390
>gnl|LJGI|TC66242 similar to UniRef100_A7NU85 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 621
Score = 238 bits (120), Expect = 7e-62
Identities = 311/372 (83%), Gaps = 2/372 (0%)
Strand = Plus / Plus
Query: 943 aaagatcttaatcatcagaggagcgtgttccgagatatcgtggagttttttgagtatggt 1002
|||||||||||| ||| |||| | ||||| |||||| |||| ||||| |||||||||
Sbjct: 5 aaagatcttaatactcaaaggaacctgttcaaagatattttggattttttcgagtatggt 64
Query: 1003 tacactcctgaaatttctatgaagattggcggtgattcactgcaaacatcttcatggtcc 1062
||| ||||||||||| ||| |||||||| |||||||| |||| ||||| ||||||||
Sbjct: 65 tactctcctgaaattactacaaagattggtggtgattcgttgcagacatcgtcatggtcg 124
Query: 1063 caagtgatacagttaaactttatcaggcactttctagggggtggtttcatcaagcatatg 1122
||| |||||||||| |||| ||||| |||||| || || || || |||||||||||||||
Sbjct: 125 caaatgatacagttgaactatatcaagcacttccttggaggaggattcatcaagcatatg 184
Query: 1123 caggaaaacgaattccttcatgatgtctttggtttcacaccaa-gaagaagatatcttaa 1181
|||||||| |||||||| |||||||||||| |||||||||||| ||| ||| |||| |
Sbjct: 185 caggaaaatgaattcctgcatgatgtctttagtttcacaccaaagaaaaagc-atctcag 243
Query: 1182 taacaatgaacctcgaatgtctagtggtgagaagagaatgttcaagtctccaaattcgcc 1241
|||||| |||| |||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 244 taacaacgaacacagaatgtctggtgaggagaagagaatgttcaagtctccaaattcgtt 303
Query: 1242 tcagagtaaggctaggacccagtttcttaataagcaacggctgttatctgagggcagaaa 1301
| || |||||||||||||| || || |||||||| ||| | | ||||||||||||||
Sbjct: 304 tttgaacaaggctaggacccaattactcaataagcagcggttaatgtctgagggcagaaa 363
Query: 1302 ctttggtcacta 1313
||| ||||||||
Sbjct: 364 cttcggtcacta 375
>gnl|LJGI|TC64388 weakly similar to UniRef100_A7NU85 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (33%)
Length = 825
Score = 178 bits (90), Expect = 6e-44
Identities = 240/290 (82%)
Strand = Plus / Plus
Query: 143 tgcttgaccaagctcttgatgctttagatgagaaaaggggttctacgagggagaaagctt 202
|||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 459 tgcttgaccaagctctcgatgctctagatgaaaaaaggggttctacgagggagaaagctt 518
Query: 203 tttcattgatcattggggctttcaagagcaatatgcagcatcaatttgttgacaaaaaat 262
| | | ||||||| || ||||| | ||| |||||||||| ||||| || || ||||
Sbjct: 519 tcttagccatcattgacgccttcaaaaccaacttgcagcatcagtttgtggaaaagaaat 578
Query: 263 ttgccaccttattacatcagtgtcttgcttcaataaaaagaggttccaaacaggcatctg 322
|||||||| |||||||||| |||||||||||||| |||| || |||| |||| ||||
Sbjct: 579 ttgccaccatattacatcaatgtcttgcttcaatcaaaaagggacccaagaaggcttctg 638
Query: 323 caaaggaggtagctttggcatctcatgtcatcggtttgttggccctcactgttgaatgtg 382
| | |||| ||||||| ||||||| || ||| |||| |||||| | ||||||| ||||
Sbjct: 639 ccacggagatagctttcgcatctcgtgccattggttgtttggccttgactgttggttgtg 698
Query: 383 gtgataatgcacgtgaaatatttgaggaatcaattcgtcctctagatgaa 432
||||| |||||||||| ||||| || ||||| |||||||| | ||||||
Sbjct: 699 gtgatcatgcacgtgagatattcgaagaatcggttcgtcctttggatgaa 748
Score = 69.9 bits (35), Expect = 4e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 470 cattgctggagtgcttggctataatcacttttgttggtgggaa 512
|||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 774 cattgctggagtgcttggctataatcacctttgttggagggaa 816
>gnl|LJGI|AW163921 similar to UniRef100_A7NU85 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 436
Score = 174 bits (88), Expect = 9e-43
Identities = 178/208 (85%)
Strand = Plus / Plus
Query: 583 gtagttacagtcaaaccttcagctccattaataacgactgtggtatctgcttggtccttt 642
|||||| ||| ||||||||| |||||||||||||| ||||||| ||| | ||||| |||
Sbjct: 202 gtagttgcagccaaaccttctgctccattaataaccgctgtggtgtcttcctggtctttt 261
Query: 643 ctcctctctaccatgagcgagttgaagttaaattctaaaaattggcaaaattcaatatct 702
||||| ||||| |||||| | |||||| | ||||| ||| |||||||||||||||||||
Sbjct: 262 ctcctgtctactatgagcaatttgaagctgaattcaaaattttggcaaaattcaatatct 321
Query: 703 tatttatctagccttctagacaaggaagatcggcctgtacgtattgctgctggcaaagcg 762
||||||||| | ||||||||| |||||||| || | ||||| ||||||||||| ||||
Sbjct: 322 tatttatctggtcttctagaccaggaagataggtcagtacgaattgctgctggtgaagcc 381
Query: 763 ctagctctaatatttgagattggagtta 790
|| |||||||| ||||||||||||||||
Sbjct: 382 ctggctctaatttttgagattggagtta 409
Score = 60.0 bits (30), Expect = 4e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 548 tgtggcgagttattcatcccaaattaggttccaatgta 585
|||||||||| || ||||||||||||||||||||||||
Sbjct: 3 tgtggcgagtgatccatcccaaattaggttccaatgta 40
>gnl|LJGI|GO025125 similar to UniRef100_A7NU85 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 557
Score = 97.6 bits (49), Expect = 2e-19
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 143 tgcttgaccaagctcttgatgctttagatgagaaaaggggttctacgagggagaaagctt 202
|||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 256 tgcttgaccaagctctcgatgctctagatgaaaaaaggggttctacgagggagaaagctt 315
Query: 203 t 203
|
Sbjct: 316 t 316
>gnl|LJGI|TC78140 similar to UniRef100_A7NU85 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 556
Score = 71.9 bits (36), Expect = 1e-11
Identities = 84/100 (84%)
Strand = Plus / Plus
Query: 1214 agagaatgttcaagtctccaaattcgcctcagagtaaggctaggacccagtttcttaata 1273
||||||||||||||||||| |||||| | || |||||||||||||| || || ||||
Sbjct: 237 agagaatgttcaagtctccgaattcgtttttgaacaaggctaggacccaattactcaata 296
Query: 1274 agcaacggctgttatctgagggcagaaactttggtcacta 1313
|||| ||| | | ||||||||||||||||| ||||||||
Sbjct: 297 agcagcggttaatgtctgagggcagaaacttcggtcacta 336
Score = 54.0 bits (27), Expect = 2e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 1123 caggaaaacgaattccttcatgatgtctttggtttcacaccaa 1165
|||||||| ||||||| |||||||||||| ||||||||||||
Sbjct: 1 caggaaaatgaattccggcatgatgtctttagtttcacaccaa 43