Miyakogusa Predicted Gene
- Lj5g3v0308480.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0308480.1 Non Chatacterized Hit- tr|G7ICE7|G7ICE7_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,72.54,0,DUF566,Protein of unknown function DUF566; seg,NULL;
FAMILY NOT NAMED,NULL; coiled-coil,NULL,CUFF.52797.1
(1419 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75162 weakly similar to UniRef100_A7NU78 Cluster: Chr... 930 0.0
gnl|LJGI|BP057762 similar to UniRef100_UPI00006CC85D Cluster: Ca... 98 2e-19
gnl|LJGI|CB827058 similar to UniRef100_A7NU78 Cluster: Chromosom... 54 2e-06
>gnl|LJGI|TC75162 weakly similar to UniRef100_A7NU78 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (5%)
Length = 469
Score = 930 bits (469), Expect = 0.0
Identities = 469/469 (100%)
Strand = Plus / Plus
Query: 140 agcagaatgcgaatttcatgaacaggagcttggattgtacggattccgtgaggaaattga 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcagaatgcgaatttcatgaacaggagcttggattgtacggattccgtgaggaaattga 60
Query: 200 acggttcaaggaacgtggtgaggtcgctgctgcagaattcaatggcggatgtgagagctt 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acggttcaaggaacgtggtgaggtcgctgctgcagaattcaatggcggatgtgagagctt 120
Query: 260 ctcaggattcgacgctgagttcggagatcaacaaaaacggtggatctgagcctgaatctg 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctcaggattcgacgctgagttcggagatcaacaaaaacggtggatctgagcctgaatctg 180
Query: 320 aaccggagcctgttccttccgataacgaaagcgtgacttctggaagctcctcaggagcac 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaccggagcctgttccttccgataacgaaagcgtgacttctggaagctcctcaggagcac 240
Query: 380 aggaatggggaggaggacaagcgcaacgcgcgtcgtctcgagcgattgtggtgccggcga 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aggaatggggaggaggacaagcgcaacgcgcgtcgtctcgagcgattgtggtgccggcga 300
Query: 440 ggttctggcaagaggctaacaatcggttgcggcaccaaacggaacctcaaccttctggaa 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggttctggcaagaggctaacaatcggttgcggcaccaaacggaacctcaaccttctggaa 360
Query: 500 atggaaacaaagcaacggttcctccgaagcttctggcgccgaagaaatcagggtttgata 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atggaaacaaagcaacggttcctccgaagcttctggcgccgaagaaatcagggtttgata 420
Query: 560 gtcctgtatcttctccacgaggagttgtgaatagccggcttcaaggttc 608
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtcctgtatcttctccacgaggagttgtgaatagccggcttcaaggttc 469
>gnl|LJGI|BP057762 similar to UniRef100_UPI00006CC85D Cluster: Calpain family cysteine
protease containing protein; n=1; Tetrahymena thermophila
SB210|, partial (1%)
Length = 540
Score = 97.6 bits (49), Expect = 2e-19
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 1355 gagagagtagcctgagaacgcatattacacaacagaaatgcttacccagaagccaacaat 1414
|||||||||||||||||||||||||||||| || |||||||||||||||||||| || ||
Sbjct: 540 gagagagtagcctgagaacgcatattacaccacggaaatgcttacccagaagcccaccat 481
Query: 1415 gaaaa 1419
|||||
Sbjct: 480 gaaaa 476
>gnl|LJGI|CB827058 similar to UniRef100_A7NU78 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 555
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1 atgaggaggagtacgccggagaggaggaaggcggcggag 39
|||||||||||||||||||||||| || ||||||||||
Sbjct: 40 atgaggaggagtacgccggagaggcggttggcggcggag 78