Miyakogusa Predicted Gene
- Lj5g3v0292780.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0292780.1 Non Characterized Hit- tr|B9SHT1|B9SHT1_RICCO
Putative uncharacterized protein OS=Ricinus communis G,48.57,6e-18,
,CUFF.52746.1
(168 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g018930.1 | hypothetical protein | HC | chr1:5577520-55813... 254 3e-68
>Medtr1g018930.1 | hypothetical protein | HC | chr1:5577520-5581331
| 20130731
Length = 160
Score = 254 bits (649), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 128/164 (78%), Positives = 139/164 (84%), Gaps = 9/164 (5%)
Query: 5 METEASQVTVASSPGGHDEGAVRDLLTLARQLINQGKPSQALQAVIVAMKNRGGDEAVFQ 64
METEAS S G +D AVRDLLTLARQ INQGKPSQALQAV+VA+KN+GGDEAVFQ
Sbjct: 6 METEAS------SSGQND--AVRDLLTLARQFINQGKPSQALQAVVVAVKNKGGDEAVFQ 57
Query: 65 SLHRARELYRGRLQENAAVDQLASLFAECAIAEAQPGMMEPSANSNISSQPVTPDVHGSS 124
SL RARE YR RLQ+NAA DQLASLFAECAIAE QP M+EPSA +NIS+ VT D +G+S
Sbjct: 58 SLSRAREQYRSRLQQNAAADQLASLFAECAIAEVQPAMVEPSA-TNISNPSVTTDANGTS 116
Query: 125 ILAESGRMQVVLDAVSDGSSFICLKCGGLVSNHRKDEHYAYWCC 168
ILAESGR QVVLDAVSDGSSFICLKCGGLVSN R+DEHY YWCC
Sbjct: 117 ILAESGRTQVVLDAVSDGSSFICLKCGGLVSNTRRDEHYTYWCC 160