Miyakogusa Predicted Gene

Lj5g3v0292780.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0292780.1 Non Chatacterized Hit- tr|B9SHT1|B9SHT1_RICCO
Putative uncharacterized protein OS=Ricinus communis G,48.57,6e-18,
,CUFF.52746.1
         (168 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G47830.1 | Symbols:  | unknown protein; Has 35333 Blast hits ...   205   2e-53
AT5G47830.2 | Symbols:  | unknown protein; Has 35333 Blast hits ...   167   4e-42

>AT5G47830.1 | Symbols:  | unknown protein; Has 35333 Blast hits to
           34131 proteins in 2444 species: Archae - 798; Bacteria -
           22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
           - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
           chr5:19373013-19374300 REVERSE LENGTH=173
          Length = 173

 Score =  205 bits (521), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 100/170 (58%), Positives = 129/170 (75%), Gaps = 11/170 (6%)

Query: 1   MMDAMETEASQVTVASSPGGHDEGAVRDLLTLARQLINQGKPSQALQAVIVAMKNRGGDE 60
           MMDA  TE   +   S+         RD L+ AR+L++QG+PSQALQAV++AM+N+GGDE
Sbjct: 9   MMDADSTETFMLDKPST--------ARDFLSAARRLVDQGEPSQALQAVVMAMRNQGGDE 60

Query: 61  AVFQSLHRARELYRGRLQENAAVDQLASLFAECAIAEAQP-GMMEPSANSNI--SSQPVT 117
           AV Q L+R RELY+ R+QE A++DQLAS+FAECAI EAQP  + EP+ + ++  + Q VT
Sbjct: 61  AVLQILNRTRELYKRRIQETASMDQLASIFAECAITEAQPLALDEPTTSKDLFGTKQTVT 120

Query: 118 PDVHGSSILAESGRMQVVLDAVSDGSSFICLKCGGLVSNHRKDEHYAYWC 167
            D HG SIL +SGR Q++LDA +DGSSFICL+CGGLVS HR+DEHYAYWC
Sbjct: 121 ADAHGISILEKSGRSQIMLDAFADGSSFICLQCGGLVSIHRRDEHYAYWC 170


>AT5G47830.2 | Symbols:  | unknown protein; Has 35333 Blast hits to
           34131 proteins in 2444 species: Archae - 798; Bacteria -
           22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
           - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
           chr5:19373013-19373384 REVERSE LENGTH=123
          Length = 123

 Score =  167 bits (422), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 77/120 (64%), Positives = 98/120 (81%), Gaps = 3/120 (2%)

Query: 51  VAMKNRGGDEAVFQSLHRARELYRGRLQENAAVDQLASLFAECAIAEAQP-GMMEPSANS 109
           +AM+N+GGDEAV Q L+R RELY+ R+QE A++DQLAS+FAECAI EAQP  + EP+ + 
Sbjct: 1   MAMRNQGGDEAVLQILNRTRELYKRRIQETASMDQLASIFAECAITEAQPLALDEPTTSK 60

Query: 110 NI--SSQPVTPDVHGSSILAESGRMQVVLDAVSDGSSFICLKCGGLVSNHRKDEHYAYWC 167
           ++  + Q VT D HG SIL +SGR Q++LDA +DGSSFICL+CGGLVS HR+DEHYAYWC
Sbjct: 61  DLFGTKQTVTADAHGISILEKSGRSQIMLDAFADGSSFICLQCGGLVSIHRRDEHYAYWC 120