Miyakogusa Predicted Gene

Lj5g3v0291750.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0291750.3 Non Characterized Hit- tr|I1P462|I1P462_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=3
SV=1,37.3,1e-17,seg,NULL; coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL,CUFF.52741.3
         (359 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g018940.1 | chromosome-associated kinesin KIF4A-like prote...   619   e-177
Medtr3g102170.1 | chromosome-associated kinesin KIF4A-like prote...   604   e-173
Medtr4g094882.1 | chromosome-associated kinesin KIF4A-like prote...   429   e-120
Medtr5g066320.1 | chromosome-associated kinesin KIF4A-like prote...   182   5e-46
Medtr3g100270.1 | chromosome-associated kinesin KIF4A-like prote...   177   1e-44

>Medtr1g018940.1 | chromosome-associated kinesin KIF4A-like protein |
            HC | chr1:5593316-5582864 | 20130731
          Length = 1028

 Score =  619 bits (1596), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 300/359 (83%), Positives = 319/359 (88%), Gaps = 1/359 (0%)

Query: 1    MVLQRKTEEAAMATKRLKELLEARKSS-RDTSVTMNGNGTNGQRNDKSLQRWLDHELEVM 59
            MVLQRKTEEAAMATK+LKELLEARKSS RD SVT+NG+GT  Q N+KSLQRW+DHELEVM
Sbjct: 669  MVLQRKTEEAAMATKKLKELLEARKSSNRDASVTVNGSGTTKQSNEKSLQRWVDHELEVM 728

Query: 60   VKEHEVRFEYEKQSQVRAALAEELAMLKQVNEFAAKGFSPPRGKNGFARASSMSVNARMA 119
            VKEHEVRFEYEKQSQVRAAL EELAMLKQVNEFAA G SPP+GKNGFARA SMS+NARMA
Sbjct: 729  VKEHEVRFEYEKQSQVRAALGEELAMLKQVNEFAASGLSPPKGKNGFARAFSMSLNARMA 788

Query: 120  RIASLENMMSISSNSLVAMASQLSEAEERERAFTNRGHWNQLRSMGEAKNLLQYMFNSLA 179
            RIASLENM+SISSNSLVAMASQLSEAEERERAFTNRGHWNQLRSMGEAK LLQYMFNSLA
Sbjct: 789  RIASLENMLSISSNSLVAMASQLSEAEERERAFTNRGHWNQLRSMGEAKILLQYMFNSLA 848

Query: 180  DNRCQAWEKDMEIREMKDQIKELVGLLRQSEIXXXXXXXXXXXXXQAVATTLATPISGNS 239
            D RCQ WEKDME+REMKDQI+ELVGLLRQSEI                ATTLA P+SGNS
Sbjct: 849  DTRCQMWEKDMEMREMKDQIRELVGLLRQSEIKRKEVEKELKVRELDDATTLAKPVSGNS 908

Query: 240  PNLLKQHVEDIQEHLSPDSVPVQKQRKYTPGIANGQLRESAAYIDQSRMMVPIGQLSMKK 299
            PN LK  V+DI+E LSPD VP  KQRKYTPGIANGQ+RESAA+IDQSR MVPIGQLSMKK
Sbjct: 909  PNSLKHSVDDIKEPLSPDPVPASKQRKYTPGIANGQVRESAAFIDQSRKMVPIGQLSMKK 968

Query: 300  LAVAGQASGKLWRWKRSHHQWLLQFKWKWQKPWRLSERIRHSDETIMRARPRSQALPHV 358
            LAVAGQASGKLWRWKRSHHQWL+QFKWKWQKPW+LSERIRHSDET+MRARPRS  LP +
Sbjct: 969  LAVAGQASGKLWRWKRSHHQWLIQFKWKWQKPWKLSERIRHSDETMMRARPRSHTLPQI 1027


>Medtr3g102170.1 | chromosome-associated kinesin KIF4A-like protein |
            HC | chr3:47078237-47090283 | 20130731
          Length = 1025

 Score =  604 bits (1557), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 295/360 (81%), Positives = 315/360 (87%), Gaps = 4/360 (1%)

Query: 1    MVLQRKTEEAAMATKRLKELLEARK-SSRDTSVTMNGNGTNGQRNDKSLQRWLDHELEVM 59
            MVLQRKTEEAAMATKRLKELLEARK SSRDTSV  NGNGTNGQ N+KSLQRWLDHELEVM
Sbjct: 669  MVLQRKTEEAAMATKRLKELLEARKTSSRDTSVATNGNGTNGQSNEKSLQRWLDHELEVM 728

Query: 60   VKEHEVRFEYEKQSQVRAALAEELAMLKQVNEFAAKGFSPPRGKNGFARASSMSVNARMA 119
            VKEHEVRFEYEKQS+VRAALAEELAMLK VNEFAAKG SPPRGKNGFARASSMS +ARMA
Sbjct: 729  VKEHEVRFEYEKQSEVRAALAEELAMLKHVNEFAAKGLSPPRGKNGFARASSMSPSARMA 788

Query: 120  RIASLENMMSISSNSLVAMASQLSEAEERERAFTNRGHWNQLRSMGEAKNLLQYMFNSLA 179
            RIASLE+M+SISSNSLVAMASQLSEAEERERAFTNRG WNQLRSMG+AKNLLQ MFNS+ 
Sbjct: 789  RIASLESMLSISSNSLVAMASQLSEAEERERAFTNRGRWNQLRSMGDAKNLLQSMFNSVG 848

Query: 180  DNRCQAWEKDMEIREMKDQIKELVGLLRQSEIXXXXXXXXXXXXXQAVATTLATPISGNS 239
            D RCQ WEKDMEIREMKDQIKELVGLLRQSE+             Q  ATTLATP SGNS
Sbjct: 849  DARCQLWEKDMEIREMKDQIKELVGLLRQSEMKRKETEKELKVREQVGATTLATPASGNS 908

Query: 240  PNLLKQHVEDIQEHLSPDSVPVQKQRKYTPGIANGQLRESAAYIDQSRMMVPIGQLSMKK 299
            PN L+Q+ ED++    P SVPV +Q KYTPG+ANG  RES A++DQ R M PIGQLSMKK
Sbjct: 909  PNSLRQYTEDMK---GPMSVPVPRQLKYTPGVANGLTRESTAFVDQGRRMKPIGQLSMKK 965

Query: 300  LAVAGQASGKLWRWKRSHHQWLLQFKWKWQKPWRLSERIRHSDETIMRARPRSQALPHVV 359
            LA+ GQASGKLWRWKRSHHQWLLQFKWKWQKPW+LSE IRHSDETIMRARPRSQALPH++
Sbjct: 966  LAIVGQASGKLWRWKRSHHQWLLQFKWKWQKPWKLSELIRHSDETIMRARPRSQALPHIM 1025


>Medtr4g094882.1 | chromosome-associated kinesin KIF4A-like protein |
            HC | chr4:39197764-39208517 | 20130731
          Length = 1035

 Score =  429 bits (1103), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 221/360 (61%), Positives = 275/360 (76%), Gaps = 4/360 (1%)

Query: 1    MVLQRKTEEAAMATKRLKELLEARKSS-RDTSVTMNGNGTNGQRNDKSLQRWLDHELEVM 59
            MVL RKTEEA MATKRLKELLEARKSS RD S   NG+   GQ N+KSLQRWLD ELEVM
Sbjct: 679  MVLHRKTEEATMATKRLKELLEARKSSPRDHSAYSNGHLQPGQINEKSLQRWLDQELEVM 738

Query: 60   VKEHEVRFEYEKQSQVRAALAEELAMLKQVNEFAAKGFSPPRGKNGFARASSMSVNARMA 119
            V  HEVR E++KQ+QV A+L EELA LKQ ++F+ +  S   G N ++R  SMS +A++A
Sbjct: 739  VHVHEVRAEFDKQNQVHASLEEELAFLKQADQFSDRQ-SILTGNNRYSRLLSMSPDAKVA 797

Query: 120  RIASLENMMSISSNSLVAMASQLSEAEERERAFTNRGHWNQLRSMGEAKNLLQYMFNSLA 179
            RIAS+ENM+ +SS +L AM SQL+EAEERERA  +RG WNQLRSMGEAKN+LQY+FN+ A
Sbjct: 798  RIASIENMLLMSSAALKAMTSQLTEAEERERALNSRGRWNQLRSMGEAKNVLQYLFNATA 857

Query: 180  DNRCQAWEKDMEIREMKDQIKELVGLLRQSEIXXXXXXXXXXXXXQAVATTLATPISGNS 239
            + RCQ WEK+ E++++K+Q+ E V LL+QSE              QA A+TL TP S +S
Sbjct: 858  EARCQLWEKNTELKDLKEQLNEFVILLQQSEAQRKELVKEREIGEQAFASTLNTPASESS 917

Query: 240  PNLLKQHVEDIQEHLSPDSVPVQKQRKYTPGIANGQLRESAAYIDQSRMMVPIGQLSMKK 299
             + LK   +++   LSP S+P  KQ K+TPG+ NG +RES+ ++D +R MVPIG LSMK+
Sbjct: 918  RS-LKHLADEMSGPLSPMSLPAPKQLKFTPGVVNGSVRESSTFLDDARKMVPIGDLSMKR 976

Query: 300  LAVAGQASGKLWRWKRSHHQWLLQFKWKWQKPWRLSERIRHSDETIMRARPRSQALPHVV 359
            LA  GQA GKLWRWKRSHHQWLLQFKWKWQKPW+LSE I+HSDETIMR+RPR+QAL +V+
Sbjct: 977  LAAIGQA-GKLWRWKRSHHQWLLQFKWKWQKPWKLSELIKHSDETIMRSRPRAQALINVM 1035


>Medtr5g066320.1 | chromosome-associated kinesin KIF4A-like protein
           | HC | chr5:27954430-27964188 | 20130731
          Length = 1273

 Score =  182 bits (462), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 107/216 (49%), Positives = 145/216 (67%), Gaps = 23/216 (10%)

Query: 1   MVLQRKTEEAAMATKRLKELLEARK-SSRDTSVTMNGNGTNGQRNDKSLQRWLDHELEVM 59
           MVLQRKTEEA++ATKRLKELLE+RK SSR+T ++ NG G       ++L + ++HELEV 
Sbjct: 723 MVLQRKTEEASLATKRLKELLESRKASSRETGISGNGPGI------QALMQTIEHELEVT 776

Query: 60  VKEHEVRFEYEKQSQVRAALAEELAMLKQVNEFAAKGFSPPRGKNGFARASSMSVNARMA 119
           V+ HEVR EY++Q +VRA +A+E A LK+  E           K       SMS  AR +
Sbjct: 777 VRVHEVRSEYQRQMEVRAEMAKESARLKEEAEMM---------KLNNTSDVSMSPAARSS 827

Query: 120 RIASLENMMSISSNSLVAMASQLSEAEERERAFTNRGHWNQLRSMGEAKNLLQYMFNSLA 179
           RI +LENM++ SS +LV+MASQLSEAEERER F+ +G WNQ+RS+ +AKNL+ ++FN  +
Sbjct: 828 RIFALENMLATSSTTLVSMASQLSEAEERERVFSGKGRWNQVRSLADAKNLMNFLFNLAS 887

Query: 180 DNRCQAWE-------KDMEIREMKDQIKELVGLLRQ 208
            +RC   E       KDMEI ++K +I  L+  L Q
Sbjct: 888 SSRCSLREKEFICRDKDMEIFDLKQKIVSLIRSLEQ 923


>Medtr3g100270.1 | chromosome-associated kinesin KIF4A-like protein
           | HC | chr3:46086948-46078621 | 20130731
          Length = 1119

 Score =  177 bits (449), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/219 (48%), Positives = 145/219 (66%), Gaps = 21/219 (9%)

Query: 1   MVLQRKTEEAAMATKRLKELLEARK-SSRDTSVTMNGNGTNGQRNDKSLQRWLDHELEVM 59
           MVLQRKTEEA++ATKRLKELLE+R+ SSR+T    +G G       ++L + ++HELEV 
Sbjct: 714 MVLQRKTEEASLATKRLKELLESRRASSRETMGGGSGPGV------QALIKAIEHELEVT 767

Query: 60  VKEHEVRFEYEKQSQVRAALAEELAMLKQVNEFAAKGFSPPRGKNGFARASSMSVNARMA 119
           V+ +EVR EYE+Q Q RA +AEE+  LK+  E         R  N      SMS  AR +
Sbjct: 768 VRVNEVRSEYERQIQERAKMAEEMTKLKEEAELM-------RQNNTSDCPISMSSGARNS 820

Query: 120 RIASLENMMSISSNSLVAMASQLSEAEERERAFTNRGHWNQLRSMGEAKNLLQYMFNSLA 179
           RI +LENM+S SS +LV+MASQLSEAEE ER F+ +G W Q+RS+ +AKNL+ Y+F+  +
Sbjct: 821 RIFALENMLSTSSATLVSMASQLSEAEESERVFSGKGRWTQVRSLADAKNLMNYLFDIAS 880

Query: 180 DNRCQ-------AWEKDMEIREMKDQIKELVGLLRQSEI 211
            +RC          EKDMEIR++K+++  L   LRQ E+
Sbjct: 881 SSRCSLRDKEVICREKDMEIRDLKEKLVRLSYSLRQLEM 919