Miyakogusa Predicted Gene

Lj5g3v0291750.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0291750.3 Non Chatacterized Hit- tr|I1P462|I1P462_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=3
SV=1,37.3,1e-17,seg,NULL; coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL,CUFF.52741.3
         (359 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G47820.2 | Symbols: FRA1 | P-loop containing nucleoside triph...   524   e-149
AT5G47820.1 | Symbols: FRA1 | P-loop containing nucleoside triph...   524   e-149
AT3G50240.1 | Symbols: KICP-02 | ATP binding microtubule motor f...   296   1e-80
AT5G60930.1 | Symbols:  | P-loop containing nucleoside triphosph...   178   5e-45

>AT5G47820.2 | Symbols: FRA1 | P-loop containing nucleoside
            triphosphate hydrolases superfamily protein |
            chr5:19366505-19372229 FORWARD LENGTH=1035
          Length = 1035

 Score =  524 bits (1350), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 257/360 (71%), Positives = 299/360 (83%), Gaps = 7/360 (1%)

Query: 1    MVLQRKTEEAAMATKRLKELLEARKSS-RDTSVTMNGNGTNGQRNDKSLQRWLDHELEVM 59
            MVLQRKTEEAAMATKRLKELLEARKSS R+ S   NG GTNGQ N+KSLQRWLDHELEVM
Sbjct: 681  MVLQRKTEEAAMATKRLKELLEARKSSPREHSAGTNGFGTNGQTNEKSLQRWLDHELEVM 740

Query: 60   VKEHEVRFEYEKQSQVRAALAEELAMLKQVNEFAAKGFSPPRGKNGFARASSMSVNARMA 119
            V  HEVR EYEKQS VRAALAEELA+L+QV+EFA KG SPPRGKNGFARASS+S NARMA
Sbjct: 741  VNVHEVRHEYEKQSHVRAALAEELAVLRQVDEFAVKGLSPPRGKNGFARASSLSPNARMA 800

Query: 120  RIASLENMMSISSNSLVAMASQLSEAEERERAFTNRGHWNQLRSMGEAKNLLQYMFNSLA 179
            RI+SLENM+ ISSNSLVAMASQLSEAEERERAFTNRG WNQLRSMGEAKNLLQYMFNSLA
Sbjct: 801  RISSLENMLVISSNSLVAMASQLSEAEERERAFTNRGRWNQLRSMGEAKNLLQYMFNSLA 860

Query: 180  DNRCQAWEKDMEIREMKDQIKELVGLLRQSEIXXXXXXXXXXXXXQAVATTLATPISGNS 239
            + RCQ WEKD+EI+EMKDQ KE+VGLLRQSE+             QA+AT+L TP     
Sbjct: 861  ETRCQLWEKDVEIKEMKDQFKEIVGLLRQSELRRKEAEKELKLREQAIATSLGTP----- 915

Query: 240  PNLLKQHVEDIQEHLSPDSVPVQKQRKYTPGIANGQLRESAAYIDQSRMMVPIGQLSMKK 299
            P+ +K   ED+    SP +VP QKQ K+TPGIANG++R  AA++D ++ MVP+GQ+SM+K
Sbjct: 916  PSSVKHVAEDLSTP-SPMTVPAQKQLKFTPGIANGKVRGPAAFLDTNKKMVPMGQVSMRK 974

Query: 300  LAVAGQASGKLWRWKRSHHQWLLQFKWKWQKPWRLSERIRHSDETIMRARPRSQALPHVV 359
            L+  G+  G+LWRWKRSHHQW++QFKWKWQKPWRLSE IR SDET+++++PR +ALP+ +
Sbjct: 975  LSAVGKQGGRLWRWKRSHHQWIVQFKWKWQKPWRLSEWIRTSDETLLKSKPRLKALPNKI 1034


>AT5G47820.1 | Symbols: FRA1 | P-loop containing nucleoside
            triphosphate hydrolases superfamily protein |
            chr5:19366505-19372229 FORWARD LENGTH=1035
          Length = 1035

 Score =  524 bits (1350), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 257/360 (71%), Positives = 299/360 (83%), Gaps = 7/360 (1%)

Query: 1    MVLQRKTEEAAMATKRLKELLEARKSS-RDTSVTMNGNGTNGQRNDKSLQRWLDHELEVM 59
            MVLQRKTEEAAMATKRLKELLEARKSS R+ S   NG GTNGQ N+KSLQRWLDHELEVM
Sbjct: 681  MVLQRKTEEAAMATKRLKELLEARKSSPREHSAGTNGFGTNGQTNEKSLQRWLDHELEVM 740

Query: 60   VKEHEVRFEYEKQSQVRAALAEELAMLKQVNEFAAKGFSPPRGKNGFARASSMSVNARMA 119
            V  HEVR EYEKQS VRAALAEELA+L+QV+EFA KG SPPRGKNGFARASS+S NARMA
Sbjct: 741  VNVHEVRHEYEKQSHVRAALAEELAVLRQVDEFAVKGLSPPRGKNGFARASSLSPNARMA 800

Query: 120  RIASLENMMSISSNSLVAMASQLSEAEERERAFTNRGHWNQLRSMGEAKNLLQYMFNSLA 179
            RI+SLENM+ ISSNSLVAMASQLSEAEERERAFTNRG WNQLRSMGEAKNLLQYMFNSLA
Sbjct: 801  RISSLENMLVISSNSLVAMASQLSEAEERERAFTNRGRWNQLRSMGEAKNLLQYMFNSLA 860

Query: 180  DNRCQAWEKDMEIREMKDQIKELVGLLRQSEIXXXXXXXXXXXXXQAVATTLATPISGNS 239
            + RCQ WEKD+EI+EMKDQ KE+VGLLRQSE+             QA+AT+L TP     
Sbjct: 861  ETRCQLWEKDVEIKEMKDQFKEIVGLLRQSELRRKEAEKELKLREQAIATSLGTP----- 915

Query: 240  PNLLKQHVEDIQEHLSPDSVPVQKQRKYTPGIANGQLRESAAYIDQSRMMVPIGQLSMKK 299
            P+ +K   ED+    SP +VP QKQ K+TPGIANG++R  AA++D ++ MVP+GQ+SM+K
Sbjct: 916  PSSVKHVAEDLSTP-SPMTVPAQKQLKFTPGIANGKVRGPAAFLDTNKKMVPMGQVSMRK 974

Query: 300  LAVAGQASGKLWRWKRSHHQWLLQFKWKWQKPWRLSERIRHSDETIMRARPRSQALPHVV 359
            L+  G+  G+LWRWKRSHHQW++QFKWKWQKPWRLSE IR SDET+++++PR +ALP+ +
Sbjct: 975  LSAVGKQGGRLWRWKRSHHQWIVQFKWKWQKPWRLSEWIRTSDETLLKSKPRLKALPNKI 1034


>AT3G50240.1 | Symbols: KICP-02 | ATP binding microtubule motor family
            protein | chr3:18623380-18628784 REVERSE LENGTH=1051
          Length = 1051

 Score =  296 bits (759), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 183/361 (50%), Positives = 232/361 (64%), Gaps = 23/361 (6%)

Query: 1    MVLQRKTEEAAMATKRLKELLEARKSS-RDTSVTMNGNGTNGQRNDKSLQRWLDHELEVM 59
            MVLQRKTEEAAMATKRLKELLEARKSS  D SV  NG   + Q N+KSL++WLD+ELEVM
Sbjct: 686  MVLQRKTEEAAMATKRLKELLEARKSSPHDISVIANGQPPSRQTNEKSLRKWLDNELEVM 745

Query: 60   VKEHEVRFEYEKQSQVRAALAEELAMLKQVNEFAAKGFSPPRGKNGFARASSMSVNARMA 119
             K H+VRF+YEKQ QVRAALA EL  L+Q  EF +       G+  F     +S N R+ 
Sbjct: 746  AKVHQVRFQYEKQIQVRAALAVELTSLRQEMEFPSNSHQEKNGQFRF-----LSPNTRLE 800

Query: 120  RIASLENMMSISSNSLVAMASQLSEAEERERAFTNRGHWNQLRSMGEAKNLLQYMFNSLA 179
            RIASLE+M+ +SSN+L AM SQLSEAEERE +   +  WN ++SM +AK LLQY+F+S A
Sbjct: 801  RIASLESMLDVSSNALTAMGSQLSEAEEREHSLHAKPRWNHIQSMTDAKYLLQYVFDSTA 860

Query: 180  DNRCQAWEKDMEIREMKDQIKELVGLLRQSEIXXXXXXXXXXXXXQAVATTLA--TPISG 237
            + R + WEKD +I+E K+Q+ +L+ LL+ +E+             Q V+  LA  +    
Sbjct: 861  EARSKIWEKDRDIKEKKEQLNDLLCLLQLTEVQNREILKEKKTREQTVSIALASTSSSYS 920

Query: 238  NSPNLLKQHVEDIQEHLSPDSVPVQKQR-----KYT-PGIANGQLRESAAYIDQSRMMVP 291
             S     +H  D      P S      R     KYT PGI N  +RES A ++++R M  
Sbjct: 921  GSSRSSSKHYGDNNASDDPSSPSSTYHRATKHLKYTGPGIVNISVRESEALLEETRKMK- 979

Query: 292  IGQLSMKKLAVAGQASGKLWRWKRSHHQWLLQFKWKWQKPWRLSERIRHSDETIMRARPR 351
                +MKK+   GQ SGKLW+WKRSHHQWLLQFKWKWQKPW+LSE I+ +DET M    +
Sbjct: 980  ----AMKKM---GQ-SGKLWKWKRSHHQWLLQFKWKWQKPWKLSEWIKQNDETTMHVMSK 1031

Query: 352  S 352
            S
Sbjct: 1032 S 1032


>AT5G60930.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr5:24515398-24522511
           REVERSE LENGTH=1294
          Length = 1294

 Score =  178 bits (452), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 103/219 (47%), Positives = 146/219 (66%), Gaps = 21/219 (9%)

Query: 1   MVLQRKTEEAAMATKRLKELLEARK-SSRDTSVTMNGNGTNGQRNDKSLQRWLDHELEVM 59
           +VLQRKTEEA+  TKRLKELL+ RK SSR+T    NG GT      ++L + ++HE+EV 
Sbjct: 730 LVLQRKTEEASQVTKRLKELLDNRKASSRETLSGANGPGT------QALMQAIEHEIEVT 783

Query: 60  VKEHEVRFEYEKQSQVRAALAEELAMLKQVNEFAAKGFSPPRGKNGFARASSMSVNARMA 119
           V+ HEVR EYE+Q++ RA +A+E+A L++ NE          G        +MS  AR +
Sbjct: 784 VRVHEVRSEYERQTEERARMAKEVARLREENELLKNAKISVHG-------DTMSPGARNS 836

Query: 120 RIASLENMMSISSNSLVAMASQLSEAEERERAFTNRGHWNQLRSMGEAKNLLQYMFNSLA 179
           RI +LENM++ SS++LV+MASQLSEAEERER F  RG WNQ+R++G+AK+++ Y+FN  +
Sbjct: 837 RIFALENMLATSSSTLVSMASQLSEAEERERVFGGRGRWNQVRTLGDAKSIMNYLFNLAS 896

Query: 180 DNRCQA-------WEKDMEIREMKDQIKELVGLLRQSEI 211
             RC A        EKD+ IR++K++I +    +R  EI
Sbjct: 897 TARCLARDKEADCREKDVLIRDLKEKIVKFSSYVRYMEI 935