Miyakogusa Predicted Gene
- Lj5g3v0277980.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0277980.1 Non Chatacterized Hit- tr|B8A1V8|B8A1V8_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,46.08,2e-18,seg,NULL; no
description,NULL; AMP-binding,AMP-dependent synthetase/ligase;
DUF4009,Domain of unknow,CUFF.52816.1
(1644 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61588 similar to UniRef100_A7NVS8 Cluster: Chromosome... 3259 0.0
gnl|LJGI|GO037486 similar to UniRef100_P0C5B6 Cluster: 4-coumara... 682 0.0
gnl|LJGI|AV769190 similar to UniRef100_A7NVS8 Cluster: Chromosom... 204 1e-51
>gnl|LJGI|TC61588 similar to UniRef100_A7NVS8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (89%)
Length = 1961
Score = 3259 bits (1644), Expect = 0.0
Identities = 1644/1644 (100%)
Strand = Plus / Plus
Query: 1 atgagtggaaggaacattgacccgagaagtggcttctgcagctccaattcaatcttctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 atgagtggaaggaacattgacccgagaagtggcttctgcagctccaattcaatcttctac 142
Query: 61 agcaagcggaagcccctccctctccctccaaaccactccttagacgtcactactttcatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 agcaagcggaagcccctccctctccctccaaaccactccttagacgtcactactttcatc 202
Query: 121 tcctcccgctcccaccatggcaagaccgccttcatcgacgctgccactggccgcaagttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tcctcccgctcccaccatggcaagaccgccttcatcgacgctgccactggccgcaagttc 262
Query: 181 acctaccaacacctctggaccgccgtccacgccgtcgcctcctctctctccgacatgggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 acctaccaacacctctggaccgccgtccacgccgtcgcctcctctctctccgacatgggc 322
Query: 241 atccgaaagggcaacgtcgtcctcctcctttcccccaactccatctacttccccgtcgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 atccgaaagggcaacgtcgtcctcctcctttcccccaactccatctacttccccgtcgtc 382
Query: 301 tgcctcgccgtcatgtccctcggcgccatcatcaccaccaccaaccccctcaacacccct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tgcctcgccgtcatgtccctcggcgccatcatcaccaccaccaaccccctcaacacccct 442
Query: 361 caagaaatcgccaagcagatcgccgattccaaccccgtcctcgccttcaccatccctccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 caagaaatcgccaagcagatcgccgattccaaccccgtcctcgccttcaccatccctccc 502
Query: 421 ctgctccccaaaatcaccgccgcatcaccctccctcccaattgttctcatggattccgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ctgctccccaaaatcaccgccgcatcaccctccctcccaattgttctcatggattccgat 562
Query: 481 tcaccatcttcttcaggtgccagtgccaccaccctggaccagatgatgaaaaccgaaccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tcaccatcttcttcaggtgccagtgccaccaccctggaccagatgatgaaaaccgaaccc 622
Query: 541 aaggcgaatcagatcagggaccgagttgaccaggacgacaccgccacgctgctttactcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aaggcgaatcagatcagggaccgagttgaccaggacgacaccgccacgctgctttactcc 682
Query: 601 tccggcaccaccggacccagcaaaggagtgatctcctcgcaccggaacctcatagcaatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tccggcaccaccggacccagcaaaggagtgatctcctcgcaccggaacctcatagcaatg 742
Query: 661 gttgaaatcgttcaaagccggttcagcaaggaagatgaacaaaccttcatctgcacggtg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gttgaaatcgttcaaagccggttcagcaaggaagatgaacaaaccttcatctgcacggtg 802
Query: 721 cccatgttccacatatacggcctcgctgtgtttgcgacggggctgctcatttcgggatca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 cccatgttccacatatacggcctcgctgtgtttgcgacggggctgctcatttcgggatca 862
Query: 781 accatcgtggttctctccaaatttgaaatgcacgacatgttttccacgatcgacaagttc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 accatcgtggttctctccaaatttgaaatgcacgacatgttttccacgatcgacaagttc 922
Query: 841 cgcgccacgttcctgccgctggtgccgccgatactggtggcgatgatcaacaacgctgat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 cgcgccacgttcctgccgctggtgccgccgatactggtggcgatgatcaacaacgctgat 982
Query: 901 gcgattaaggggaagtatgacttgagttcactgcacacggtgctatcaggtggggctccg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983 gcgattaaggggaagtatgacttgagttcactgcacacggtgctatcaggtggggctccg 1042
Query: 961 ctgagcaaggaggtgacggaggggtttgttgacaagtacccaaacgtcaccatccttcag 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1043 ctgagcaaggaggtgacggaggggtttgttgacaagtacccaaacgtcaccatccttcag 1102
Query: 1021 ggttacggcttgacggaatcctcaggagtgggggcatccactgactccttggacgagagc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1103 ggttacggcttgacggaatcctcaggagtgggggcatccactgactccttggacgagagc 1162
Query: 1081 cggaggtacggcacggcggggatgttgtctcctgccgctgaggctatggttgttgaccct 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1163 cggaggtacggcacggcggggatgttgtctcctgccgctgaggctatggttgttgaccct 1222
Query: 1141 gaaaccggtcgagcgctgggggttaaccagaccggtgagctctggctccggggacccacc 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1223 gaaaccggtcgagcgctgggggttaaccagaccggtgagctctggctccggggacccacc 1282
Query: 1201 atcatgaaaggttatttcagtaatgaggaggcaaccacatcaacccttaattcagaggga 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1283 atcatgaaaggttatttcagtaatgaggaggcaaccacatcaacccttaattcagaggga 1342
Query: 1261 tggttaagaacaggagatatttgctacattgataatgatggctttttatttatcgttgat 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1343 tggttaagaacaggagatatttgctacattgataatgatggctttttatttatcgttgat 1402
Query: 1321 cgcctgaaagagctaatcaaatacaagggatatcaggtacctccagctgaactagaggct 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1403 cgcctgaaagagctaatcaaatacaagggatatcaggtacctccagctgaactagaggct 1462
Query: 1381 ttgttgcttactcattcagctattttagatgctgctgttataccgtatcctgataaggag 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1463 ttgttgcttactcattcagctattttagatgctgctgttataccgtatcctgataaggag 1522
Query: 1441 gctgggcagtttccaatggcgtatgttgttaggaaagatggaggtagcatatcagaaaaa 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1523 gctgggcagtttccaatggcgtatgttgttaggaaagatggaggtagcatatcagaaaaa 1582
Query: 1501 caagttatggattttgttgcagaacaggtggctccgtataagagaattcggaaagtggcc 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1583 caagttatggattttgttgcagaacaggtggctccgtataagagaattcggaaagtggcc 1642
Query: 1561 ttcatatcttccataccaaaaaatgcatctggtaaaattcttaggaaggatctaatcaag 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1643 ttcatatcttccataccaaaaaatgcatctggtaaaattcttaggaaggatctaatcaag 1702
Query: 1621 ctcgcaacgtctaaactctgatcg 1644
||||||||||||||||||||||||
Sbjct: 1703 ctcgcaacgtctaaactctgatcg 1726
>gnl|LJGI|GO037486 similar to UniRef100_P0C5B6 Cluster: 4-coumarate--CoA ligase-like 4;
n=1; Arabidopsis thaliana|Rep: 4-coumarate--CoA
ligase-like 4 - Arabidopsis thaliana (Mouse-ear cress),
partial (21%)
Length = 470
Score = 682 bits (344), Expect = 0.0
Identities = 347/348 (99%)
Strand = Plus / Plus
Query: 1211 gttatttcagtaatgaggaggcaaccacatcaacccttaattcagagggatggttaagaa 1270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gttatttcagtaatgaggaggcaaccacatcaacccttaattcagagggatggttaagaa 182
Query: 1271 caggagatatttgctacattgataatgatggctttttatttatcgttgatcgcctgaaag 1330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 caggagatatttgctacattgataatgatggctttttatttatcgttgatcgcctgaaag 242
Query: 1331 agctaatcaaatacaagggatatcaggtacctccagctgaactagaggctttgttgctta 1390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 agctaatcaaatacaagggatatcaggtacctccagctgaactagaggctttgttgctta 302
Query: 1391 ctcattcagctattttagatgctgctgttataccgtatcctgataaggaggctgggcagt 1450
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ctcattcagctattttagatgttgctgttataccgtatcctgataaggaggctgggcagt 362
Query: 1451 ttccaatggcgtatgttgttaggaaagatggaggtagcatatcagaaaaacaagttatgg 1510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ttccaatggcgtatgttgttaggaaagatggaggtagcatatcagaaaaacaagttatgg 422
Query: 1511 attttgttgcagaacaggtggctccgtataagagaattcggaaagtgg 1558
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 attttgttgcagaacaggtggctccgtataagagaattcggaaagtgg 470
>gnl|LJGI|AV769190 similar to UniRef100_A7NVS8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 276
Score = 204 bits (103), Expect = 1e-51
Identities = 103/103 (100%)
Strand = Plus / Minus
Query: 1111 cctgccgctgaggctatggttgttgaccctgaaaccggtcgagcgctgggggttaaccag 1170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 cctgccgctgaggctatggttgttgaccctgaaaccggtcgagcgctgggggttaaccag 217
Query: 1171 accggtgagctctggctccggggacccaccatcatgaaaggtt 1213
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 accggtgagctctggctccggggacccaccatcatgaaaggtt 174