Miyakogusa Predicted Gene
- Lj5g3v0255530.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0255530.1 tr|G7JAE0|G7JAE0_MEDTR Ribonuclease P protein
subunit p25 OS=Medicago truncatula GN=MTR_3g095260
PE=,44.44,0.0000000002,RIBONUCLEASE P 25KDA SUBUNIT-RELATED,NULL;
AlbA-like,NULL; Alba,DNA/RNA-binding protein Alba-like; A,CUFF.52675.1
(222 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma14g40120.1 256 1e-68
Glyma14g40120.2 246 1e-65
Glyma04g39480.1 181 4e-46
Glyma04g39480.2 181 5e-46
Glyma06g15380.1 177 6e-45
Glyma06g15380.2 169 2e-42
Glyma17g38010.1 125 4e-29
>Glyma14g40120.1
Length = 249
Score = 256 bits (655), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 139/222 (62%), Positives = 142/222 (63%), Gaps = 1/222 (0%)
Query: 1 MRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTAIGSTDITDT 60
MRNYITYAM+LLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTAIGSTDITDT
Sbjct: 29 MRNYITYAMSLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTAIGSTDITDT 88
Query: 61 WXXXXXXXXXXXTTRHVSMITITLSKNELDTASVGYQPPLPADQVKAATDFDYEGESSPX 120
W TTRHVSMITITLSK ELDT+SVGYQPPLPADQVKAATDFDYEGE SP
Sbjct: 89 WEPLEEGLLPLETTRHVSMITITLSKKELDTSSVGYQPPLPADQVKAATDFDYEGEGSPN 148
Query: 121 XXXXXXXXXXXXXXXXXXFIAADYEDGGWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXHV 180
FI+ADYEDGGWD HV
Sbjct: 149 GRVRGRGGRGRGRGRGNGFISADYEDGGWDRNRGNARGRGRGRGRGFRGRGRGGYNGPHV 208
Query: 181 DMLQDGGYNQDVPQXXXXXXXXXXXXXXXXXXXSNGPIQAAA 222
DM QDGGYNQDVPQ SNGPIQAAA
Sbjct: 209 DM-QDGGYNQDVPQGRGRGRGRGGYRGRGRGFRSNGPIQAAA 249
>Glyma14g40120.2
Length = 225
Score = 246 bits (628), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/194 (67%), Positives = 133/194 (68%), Gaps = 1/194 (0%)
Query: 1 MRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTAIGSTDITDT 60
MRNYITYAM+LLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTAIGSTDITDT
Sbjct: 29 MRNYITYAMSLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTAIGSTDITDT 88
Query: 61 WXXXXXXXXXXXTTRHVSMITITLSKNELDTASVGYQPPLPADQVKAATDFDYEGESSPX 120
W TTRHVSMITITLSK ELDT+SVGYQPPLPADQVKAATDFDYEGE SP
Sbjct: 89 WEPLEEGLLPLETTRHVSMITITLSKKELDTSSVGYQPPLPADQVKAATDFDYEGEGSPN 148
Query: 121 XXXXXXXXXXXXXXXXXXFIAADYEDGGWDXXXXXXXXXXXXXXXXXXXXXXXXXXXXHV 180
FI+ADYEDGGWD HV
Sbjct: 149 GRVRGRGGRGRGRGRGNGFISADYEDGGWDRNRGNARGRGRGRGRGFRGRGRGGYNGPHV 208
Query: 181 DMLQDGGYNQDVPQ 194
DM QDGGYNQDVPQ
Sbjct: 209 DM-QDGGYNQDVPQ 221
>Glyma04g39480.1
Length = 261
Score = 181 bits (460), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/118 (76%), Positives = 94/118 (79%)
Query: 2 RNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTAIGSTDITDTW 61
RNYITYA TLLQEKGS+EIV KAMGRAINKTV I ELIKRRIVGLHQNT IGSTDITDTW
Sbjct: 30 RNYITYATTLLQEKGSSEIVLKAMGRAINKTVMIAELIKRRIVGLHQNTQIGSTDITDTW 89
Query: 62 XXXXXXXXXXXTTRHVSMITITLSKNELDTASVGYQPPLPADQVKAATDFDYEGESSP 119
TTRHVSMITITLSK ELDT+S GYQPPLP DQVK ++D EGE SP
Sbjct: 90 EPLEEGLLPLETTRHVSMITITLSKKELDTSSTGYQPPLPVDQVKPLNEYDEEGEGSP 147
>Glyma04g39480.2
Length = 245
Score = 181 bits (460), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 90/118 (76%), Positives = 94/118 (79%)
Query: 2 RNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTAIGSTDITDTW 61
RNYITYA TLLQEKGS+EIV KAMGRAINKTV I ELIKRRIVGLHQNT IGSTDITDTW
Sbjct: 30 RNYITYATTLLQEKGSSEIVLKAMGRAINKTVMIAELIKRRIVGLHQNTQIGSTDITDTW 89
Query: 62 XXXXXXXXXXXTTRHVSMITITLSKNELDTASVGYQPPLPADQVKAATDFDYEGESSP 119
TTRHVSMITITLSK ELDT+S GYQPPLP DQVK ++D EGE SP
Sbjct: 90 EPLEEGLLPLETTRHVSMITITLSKKELDTSSTGYQPPLPVDQVKPLNEYDEEGEGSP 147
>Glyma06g15380.1
Length = 241
Score = 177 bits (450), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 89/119 (74%), Positives = 94/119 (78%)
Query: 1 MRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTAIGSTDITDT 60
MRNYITYA TLLQEKGS+EIV KAMGRAINKTV I ELIKRRIVGLHQNT IGSTDITDT
Sbjct: 29 MRNYITYATTLLQEKGSSEIVLKAMGRAINKTVMIAELIKRRIVGLHQNTQIGSTDITDT 88
Query: 61 WXXXXXXXXXXXTTRHVSMITITLSKNELDTASVGYQPPLPADQVKAATDFDYEGESSP 119
W TTRHVSMITITLSK ELDT+S GYQ PLP DQVK +++ EGE SP
Sbjct: 89 WEPLEEGLLPLETTRHVSMITITLSKKELDTSSAGYQHPLPVDQVKPLNEYEEEGEGSP 147
>Glyma06g15380.2
Length = 240
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/114 (74%), Positives = 90/114 (78%)
Query: 1 MRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTAIGSTDITDT 60
MRNYITYA TLLQEKGS+EIV KAMGRAINKTV I ELIKRRIVGLHQNT IGSTDITDT
Sbjct: 29 MRNYITYATTLLQEKGSSEIVLKAMGRAINKTVMIAELIKRRIVGLHQNTQIGSTDITDT 88
Query: 61 WXXXXXXXXXXXTTRHVSMITITLSKNELDTASVGYQPPLPADQVKAATDFDYE 114
W TTRHVSMITITLSK ELDT+S GYQ PLP DQVK +++ E
Sbjct: 89 WEPLEEGLLPLETTRHVSMITITLSKKELDTSSAGYQHPLPVDQVKPLNEYEEE 142
>Glyma17g38010.1
Length = 98
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/61 (98%), Positives = 61/61 (100%)
Query: 1 MRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTAIGSTDITDT 60
MRNYITYAM+LLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTAIGSTDITDT
Sbjct: 29 MRNYITYAMSLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTAIGSTDITDT 88
Query: 61 W 61
W
Sbjct: 89 W 89