Miyakogusa Predicted Gene
- Lj5g3v0255530.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0255530.1 tr|G7JAE0|G7JAE0_MEDTR Ribonuclease P protein
subunit p25 OS=Medicago truncatula GN=MTR_3g095260
PE=,44.44,0.0000000002,RIBONUCLEASE P 25KDA SUBUNIT-RELATED,NULL;
AlbA-like,NULL; Alba,DNA/RNA-binding protein Alba-like; A,CUFF.52675.1
(669 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74094 similar to UniRef100_A7Q792 Cluster: Chromosome... 1318 0.0
gnl|LJGI|BW612687 similar to UniRef100_A7PKW8 Cluster: Chromosom... 533 e-151
gnl|LJGI|TC67816 similar to UniRef100_A7PKW8 Cluster: Chromosome... 90 2e-17
>gnl|LJGI|TC74094 similar to UniRef100_A7Q792 Cluster: Chromosome chr18 scaffold_59,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_59, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (74%)
Length = 1199
Score = 1318 bits (665), Expect = 0.0
Identities = 668/669 (99%)
Strand = Plus / Plus
Query: 1 atgcgcaactacattacttacgccatgaccttgcttcaggaaaaaggttctaatgaaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 atgcgcaactacattacttacgccatgaccttgcttcaggaaaaaggttctaatgaaatt 242
Query: 61 gttttcaaagcaatggggagagctatcaacaagacagtgacaattgtggagttgatcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gttttcaaagcaatggggagagctatcaacaagacagtgacaattgtggagttgatcaag 302
Query: 121 aggaggattgtgggtctccaccagaatacagcaattggatccactgacatcactgataca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aggaggattgtgggtctccaccagaatacagcaattggatccactgacatcactgataca 362
Query: 181 tgggagccacttgaggaaggcctccttcctttggagacgacaaggcacgtgtcaatgatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tgggagccacttgaggaaggcctccttcctttggagacgacaaggcacgtgtcaatgatt 422
Query: 241 acaataaccctttctaagaacgaacttgatacagcttctgtggggtatcagcctccatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 acaataaccctttctaagaacgaacttgatacagcttctgtggggtatcagcctccatta 482
Query: 301 ccagctgatcaggtgaaggctgccacagattttgattatgaaggagagagttcgcctaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ccagctgatcaggtgaaggctgccacagattttgattatgaaggagagagttcgcctaat 542
Query: 361 ggtcgtggtaggggtcgtggcggtcgtggcaggggtaggggcagagggaatggtttcatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ggtcgtggtaggggtcgtggcggtcgtggcaggggtaggggcagagggaatggtttcatt 602
Query: 421 gcagctgattatgaggatggaggttgggatcgttacaggggaaatgccaggggcaggggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gcagctgattatgaggatggaggttgggatcgttacaggggaaatgccaggggcaggggt 662
Query: 481 agaggaagaggacgtggcttccgtggtcgtggaaggggagggtacaatgggggccatgtt 540
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 663 agaggaagaggacgtggcttccgtggtcgtggaagggtagggtacaatgggggccatgtt 722
Query: 541 gatatgctgcaagatggaggatacaaccaagatgtaccccaaggccgtggtcgtggccgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 gatatgctgcaagatggaggatacaaccaagatgtaccccaaggccgtggtcgtggccgt 782
Query: 601 gggcgaggtggatatcgtggaaggggtcgtggctttagatccaatggtccgatccaggca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 gggcgaggtggatatcgtggaaggggtcgtggctttagatccaatggtccgatccaggca 842
Query: 661 gctgcctga 669
|||||||||
Sbjct: 843 gctgcctga 851
>gnl|LJGI|BW612687 similar to UniRef100_A7PKW8 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 475
Score = 533 bits (269), Expect = e-151
Identities = 269/269 (100%)
Strand = Plus / Plus
Query: 1 atgcgcaactacattacttacgccatgaccttgcttcaggaaaaaggttctaatgaaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 atgcgcaactacattacttacgccatgaccttgcttcaggaaaaaggttctaatgaaatt 266
Query: 61 gttttcaaagcaatggggagagctatcaacaagacagtgacaattgtggagttgatcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gttttcaaagcaatggggagagctatcaacaagacagtgacaattgtggagttgatcaag 326
Query: 121 aggaggattgtgggtctccaccagaatacagcaattggatccactgacatcactgataca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aggaggattgtgggtctccaccagaatacagcaattggatccactgacatcactgataca 386
Query: 181 tgggagccacttgaggaaggcctccttcctttggagacgacaaggcacgtgtcaatgatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tgggagccacttgaggaaggcctccttcctttggagacgacaaggcacgtgtcaatgatt 446
Query: 241 acaataaccctttctaagaacgaacttga 269
|||||||||||||||||||||||||||||
Sbjct: 447 acaataaccctttctaagaacgaacttga 475
>gnl|LJGI|TC67816 similar to UniRef100_A7PKW8 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (71%)
Length = 1270
Score = 89.7 bits (45), Expect = 2e-17
Identities = 150/185 (81%)
Strand = Plus / Plus
Query: 34 cttcaggaaaaaggttctaatgaaattgttttcaaagcaatggggagagctatcaacaag 93
|||||||| || || ||| ||||||||||| ||||||||||||| | || || || |||
Sbjct: 302 cttcaggagaagggatctgatgaaattgttctcaaagcaatgggacgtgcaataaataag 361
Query: 94 acagtgacaattgtggagttgatcaagaggaggattgtgggtctccaccagaatacagca 153
|| || | ||| ||| |||||||||| |||||||| ||||| |||||||| ||
Sbjct: 362 actgtaatgattactgagctgatcaagagaaggattgttggtctgcaccagaacactctg 421
Query: 154 attggatccactgacatcactgatacatgggagccacttgaggaaggcctccttcctttg 213
|||||||| ||||| || ||||| |||||||| ||||| || |||||||| |||||||||
Sbjct: 422 attggatcaactgatataactgacacatgggaaccactagaagaaggccttcttcctttg 481
Query: 214 gagac 218
|||||
Sbjct: 482 gagac 486