Miyakogusa Predicted Gene
- Lj5g3v0087430.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0087430.1 Non Characterized Hit- tr|A3BQA8|A3BQA8_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,34.46,3e-18,PRE-MRNA CLEAVAGE COMPLEX II,NULL; seg,NULL;
ZINC_FINGER_C2H2_1,Zinc finger,
C2H2,NODE_39939_length_2664_cov_53.167793.path2.1
(683 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g061130.1 | RNA polymerase II-binding domain protein | HC ... 714 0.0
Medtr1g061130.2 | RNA polymerase II-binding domain protein | HC ... 714 0.0
Medtr1g061130.3 | RNA polymerase II-binding domain protein | HC ... 711 0.0
Medtr7g103840.2 | ENTH/VHS-like protein | HC | chr7:41991161-419... 522 e-148
Medtr7g103840.1 | ENTH/VHS-like protein | HC | chr7:41991606-419... 519 e-147
Medtr6g011450.2 | PCF11P-related protein | HC | chr6:3248562-325... 122 1e-27
Medtr6g011450.1 | PCF11P-related protein | HC | chr6:3246456-325... 120 4e-27
Medtr4g073340.1 | hypothetical protein | HC | chr4:27754923-2775... 118 2e-26
Medtr6g011470.1 | PCF11P-related protein | HC | chr6:3262423-326... 87 5e-17
>Medtr1g061130.1 | RNA polymerase II-binding domain protein | HC |
chr1:26672968-26665891 | 20130731
Length = 1021
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/734 (55%), Positives = 468/734 (63%), Gaps = 81/734 (11%)
Query: 1 MGTGRTGGRVAELGSDKSGYNKAAGAGVAGTISGQRNGLSIKNNFLNTEASMILDARNQP 60
MG GRT GRVA+LG + A AGV+GTISGQRN + +K++F NTEASM +QP
Sbjct: 318 MGIGRTDGRVAKLG--HRNLSSKAAAGVSGTISGQRNSVGLKHSFSNTEASM-----HQP 370
Query: 61 RQNINSLQRGVMSNSWKHSEEEEFMWDEMNAGLTGHDAASVPNNLSKDSWTSDDENLEVE 120
+NI +QR V+S+SW++SEEEE+ WDEMN GLTGH V NNL D+WT+DDENLE E
Sbjct: 371 IRNIAGIQRNVISSSWQNSEEEEYSWDEMNTGLTGH---GVRNNLGNDAWTADDENLEAE 427
Query: 121 DNHHQSRNPFGANVDTEMSIESQATERKQLPAFRPHPSLSWKLQEQHSIDELNQKPGHSD 180
DNHHQ RN F ANVD EM SQATE+KQ AF+ HPSLSW+LQEQ SID L++KPGH +
Sbjct: 428 DNHHQIRNVFRANVDREMPNRSQATEKKQSHAFQHHPSLSWQLQEQQSIDALDRKPGHLE 487
Query: 181 GFVSTLGALPTNTNSAATRMGNRSLLPKATIGLAGNLGQ-LHSVGDESPSRESSLRQQSP 239
G + G+LP N +S+A RMGNR+ LP A IGLA GQ HSVG ESPS +S LR +SP
Sbjct: 488 GSMLMSGSLPANASSSAARMGNRAFLPNARIGLAEIEGQQFHSVGSESPSGQSPLRHRSP 547
Query: 240 PP-----------------------------------------------VGKFHRS-QLR 251
P VG RS QL+
Sbjct: 548 SPPSIDHSHLMKSLAMQDHPHTRKTSHFLGGLHSQYNEDSSPTLAPNIHVGDLRRSSQLK 607
Query: 252 DLQSGSFSSMTFQPSHKQQLGSSHTEVTAKTEKPHLSKVPLPRET-EQPTTTRFETAAGK 310
DLQ G S FQP ++QQL SSH EVT +TEKP LSKV L R+T EQP T+ + A+ K
Sbjct: 608 DLQ-GPLPSSGFQPRYQQQLSSSHAEVTIETEKPPLSKVSLARKTSEQPATSHTKAASVK 666
Query: 311 GGKLSNMPITNRLPTSRSLDTGKLPSILGDRPSQSSGSSPAGLXXXXXXXXXXXXLGRPK 370
G SNMP T+ LPS+LG RPSQS GSS A +
Sbjct: 667 NGTFSNMPTTS-----------SLPSLLGARPSQSGGSSHAKIISSVSVNV--------S 707
Query: 371 DNSSALPKIPPRRAAQPPRTSALPPASSNXXXXXXXXXXXXXXXXXXXXXXXXXXVAKGL 430
+S LPK P R+A QP RTS L PASSN VAKGL
Sbjct: 708 PSSPVLPKRPQRKAGQPLRTSTLSPASSNVSSASAQSSGATNHTSNPLANLLSSLVAKGL 767
Query: 431 ISAETETTAKVPSEMLTRLEDQSDSITTXXXXXXXXXXXXXXXXX-XTKDEVDDGAKTPI 489
IS TET A+VP E LTRLED DS +T TKDE+DD AKTP+
Sbjct: 768 ISTVTETPAEVPPETLTRLEDHCDSFSTSSSMPVASLSGSAAVPIPSTKDELDDTAKTPM 827
Query: 490 SLSESTSTEIRNFIGFEFKPDVIRELHPSVISGLFDDFPHHCSICSLKLKFQEQFDRHLE 549
SLSESTST+IRN IGFEFKP+VIR+LHPSVISGLFDDFPHHCSIC LKLKFQEQF+RHLE
Sbjct: 828 SLSESTSTDIRNVIGFEFKPNVIRKLHPSVISGLFDDFPHHCSICGLKLKFQEQFNRHLE 887
Query: 550 WHATREREHSGLIKASRWYLKSSDWVVGKVESLSENEFADSVDRYGKETDRNQEDAMVLA 609
WHATRERE +GLI ASRWYLKSSDWV GK E SENEF DS+D ETD++QEDAMVLA
Sbjct: 888 WHATRERECTGLITASRWYLKSSDWVAGKAECPSENEFTDSLDSQDSETDKDQEDAMVLA 947
Query: 610 DENQCLCVLCGELFEEFYCQENGEWMFKGAVYVPNSDINDDMGIRDASTGGGPIIHARCL 669
DENQCLCVLCGELFE+ YC EN EWMFK AVY+ N+DI ++GI D +G GPIIH RCL
Sbjct: 948 DENQCLCVLCGELFEDVYCHENSEWMFKAAVYMTNADIATEVGINDVISGRGPIIHTRCL 1007
Query: 670 SENPVSSVLNMEQD 683
S+ +SSV+ E D
Sbjct: 1008 SDYSLSSVVKTELD 1021
>Medtr1g061130.2 | RNA polymerase II-binding domain protein | HC |
chr1:26672968-26665891 | 20130731
Length = 1021
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/734 (55%), Positives = 468/734 (63%), Gaps = 81/734 (11%)
Query: 1 MGTGRTGGRVAELGSDKSGYNKAAGAGVAGTISGQRNGLSIKNNFLNTEASMILDARNQP 60
MG GRT GRVA+LG + A AGV+GTISGQRN + +K++F NTEASM +QP
Sbjct: 318 MGIGRTDGRVAKLG--HRNLSSKAAAGVSGTISGQRNSVGLKHSFSNTEASM-----HQP 370
Query: 61 RQNINSLQRGVMSNSWKHSEEEEFMWDEMNAGLTGHDAASVPNNLSKDSWTSDDENLEVE 120
+NI +QR V+S+SW++SEEEE+ WDEMN GLTGH V NNL D+WT+DDENLE E
Sbjct: 371 IRNIAGIQRNVISSSWQNSEEEEYSWDEMNTGLTGH---GVRNNLGNDAWTADDENLEAE 427
Query: 121 DNHHQSRNPFGANVDTEMSIESQATERKQLPAFRPHPSLSWKLQEQHSIDELNQKPGHSD 180
DNHHQ RN F ANVD EM SQATE+KQ AF+ HPSLSW+LQEQ SID L++KPGH +
Sbjct: 428 DNHHQIRNVFRANVDREMPNRSQATEKKQSHAFQHHPSLSWQLQEQQSIDALDRKPGHLE 487
Query: 181 GFVSTLGALPTNTNSAATRMGNRSLLPKATIGLAGNLGQ-LHSVGDESPSRESSLRQQSP 239
G + G+LP N +S+A RMGNR+ LP A IGLA GQ HSVG ESPS +S LR +SP
Sbjct: 488 GSMLMSGSLPANASSSAARMGNRAFLPNARIGLAEIEGQQFHSVGSESPSGQSPLRHRSP 547
Query: 240 PP-----------------------------------------------VGKFHRS-QLR 251
P VG RS QL+
Sbjct: 548 SPPSIDHSHLMKSLAMQDHPHTRKTSHFLGGLHSQYNEDSSPTLAPNIHVGDLRRSSQLK 607
Query: 252 DLQSGSFSSMTFQPSHKQQLGSSHTEVTAKTEKPHLSKVPLPRET-EQPTTTRFETAAGK 310
DLQ G S FQP ++QQL SSH EVT +TEKP LSKV L R+T EQP T+ + A+ K
Sbjct: 608 DLQ-GPLPSSGFQPRYQQQLSSSHAEVTIETEKPPLSKVSLARKTSEQPATSHTKAASVK 666
Query: 311 GGKLSNMPITNRLPTSRSLDTGKLPSILGDRPSQSSGSSPAGLXXXXXXXXXXXXLGRPK 370
G SNMP T+ LPS+LG RPSQS GSS A +
Sbjct: 667 NGTFSNMPTTS-----------SLPSLLGARPSQSGGSSHAKIISSVSVNV--------S 707
Query: 371 DNSSALPKIPPRRAAQPPRTSALPPASSNXXXXXXXXXXXXXXXXXXXXXXXXXXVAKGL 430
+S LPK P R+A QP RTS L PASSN VAKGL
Sbjct: 708 PSSPVLPKRPQRKAGQPLRTSTLSPASSNVSSASAQSSGATNHTSNPLANLLSSLVAKGL 767
Query: 431 ISAETETTAKVPSEMLTRLEDQSDSITTXXXXXXXXXXXXXXXXX-XTKDEVDDGAKTPI 489
IS TET A+VP E LTRLED DS +T TKDE+DD AKTP+
Sbjct: 768 ISTVTETPAEVPPETLTRLEDHCDSFSTSSSMPVASLSGSAAVPIPSTKDELDDTAKTPM 827
Query: 490 SLSESTSTEIRNFIGFEFKPDVIRELHPSVISGLFDDFPHHCSICSLKLKFQEQFDRHLE 549
SLSESTST+IRN IGFEFKP+VIR+LHPSVISGLFDDFPHHCSIC LKLKFQEQF+RHLE
Sbjct: 828 SLSESTSTDIRNVIGFEFKPNVIRKLHPSVISGLFDDFPHHCSICGLKLKFQEQFNRHLE 887
Query: 550 WHATREREHSGLIKASRWYLKSSDWVVGKVESLSENEFADSVDRYGKETDRNQEDAMVLA 609
WHATRERE +GLI ASRWYLKSSDWV GK E SENEF DS+D ETD++QEDAMVLA
Sbjct: 888 WHATRERECTGLITASRWYLKSSDWVAGKAECPSENEFTDSLDSQDSETDKDQEDAMVLA 947
Query: 610 DENQCLCVLCGELFEEFYCQENGEWMFKGAVYVPNSDINDDMGIRDASTGGGPIIHARCL 669
DENQCLCVLCGELFE+ YC EN EWMFK AVY+ N+DI ++GI D +G GPIIH RCL
Sbjct: 948 DENQCLCVLCGELFEDVYCHENSEWMFKAAVYMTNADIATEVGINDVISGRGPIIHTRCL 1007
Query: 670 SENPVSSVLNMEQD 683
S+ +SSV+ E D
Sbjct: 1008 SDYSLSSVVKTELD 1021
>Medtr1g061130.3 | RNA polymerase II-binding domain protein | HC |
chr1:26672968-26665965 | 20130731
Length = 1041
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/729 (55%), Positives = 466/729 (63%), Gaps = 81/729 (11%)
Query: 1 MGTGRTGGRVAELGSDKSGYNKAAGAGVAGTISGQRNGLSIKNNFLNTEASMILDARNQP 60
MG GRT GRVA+LG + A AGV+GTISGQRN + +K++F NTEASM +QP
Sbjct: 318 MGIGRTDGRVAKLG--HRNLSSKAAAGVSGTISGQRNSVGLKHSFSNTEASM-----HQP 370
Query: 61 RQNINSLQRGVMSNSWKHSEEEEFMWDEMNAGLTGHDAASVPNNLSKDSWTSDDENLEVE 120
+NI +QR V+S+SW++SEEEE+ WDEMN GLTGH V NNL D+WT+DDENLE E
Sbjct: 371 IRNIAGIQRNVISSSWQNSEEEEYSWDEMNTGLTGH---GVRNNLGNDAWTADDENLEAE 427
Query: 121 DNHHQSRNPFGANVDTEMSIESQATERKQLPAFRPHPSLSWKLQEQHSIDELNQKPGHSD 180
DNHHQ RN F ANVD EM SQATE+KQ AF+ HPSLSW+LQEQ SID L++KPGH +
Sbjct: 428 DNHHQIRNVFRANVDREMPNRSQATEKKQSHAFQHHPSLSWQLQEQQSIDALDRKPGHLE 487
Query: 181 GFVSTLGALPTNTNSAATRMGNRSLLPKATIGLAGNLGQ-LHSVGDESPSRESSLRQQSP 239
G + G+LP N +S+A RMGNR+ LP A IGLA GQ HSVG ESPS +S LR +SP
Sbjct: 488 GSMLMSGSLPANASSSAARMGNRAFLPNARIGLAEIEGQQFHSVGSESPSGQSPLRHRSP 547
Query: 240 PP-----------------------------------------------VGKFHRS-QLR 251
P VG RS QL+
Sbjct: 548 SPPSIDHSHLMKSLAMQDHPHTRKTSHFLGGLHSQYNEDSSPTLAPNIHVGDLRRSSQLK 607
Query: 252 DLQSGSFSSMTFQPSHKQQLGSSHTEVTAKTEKPHLSKVPLPRET-EQPTTTRFETAAGK 310
DLQ G S FQP ++QQL SSH EVT +TEKP LSKV L R+T EQP T+ + A+ K
Sbjct: 608 DLQ-GPLPSSGFQPRYQQQLSSSHAEVTIETEKPPLSKVSLARKTSEQPATSHTKAASVK 666
Query: 311 GGKLSNMPITNRLPTSRSLDTGKLPSILGDRPSQSSGSSPAGLXXXXXXXXXXXXLGRPK 370
G SNMP T+ LPS+LG RPSQS GSS A +
Sbjct: 667 NGTFSNMPTTS-----------SLPSLLGARPSQSGGSSHAKIISSVSVNV--------S 707
Query: 371 DNSSALPKIPPRRAAQPPRTSALPPASSNXXXXXXXXXXXXXXXXXXXXXXXXXXVAKGL 430
+S LPK P R+A QP RTS L PASSN VAKGL
Sbjct: 708 PSSPVLPKRPQRKAGQPLRTSTLSPASSNVSSASAQSSGATNHTSNPLANLLSSLVAKGL 767
Query: 431 ISAETETTAKVPSEMLTRLEDQSDSITTXXXXXXXXXXXXXXXXX-XTKDEVDDGAKTPI 489
IS TET A+VP E LTRLED DS +T TKDE+DD AKTP+
Sbjct: 768 ISTVTETPAEVPPETLTRLEDHCDSFSTSSSMPVASLSGSAAVPIPSTKDELDDTAKTPM 827
Query: 490 SLSESTSTEIRNFIGFEFKPDVIRELHPSVISGLFDDFPHHCSICSLKLKFQEQFDRHLE 549
SLSESTST+IRN IGFEFKP+VIR+LHPSVISGLFDDFPHHCSIC LKLKFQEQF+RHLE
Sbjct: 828 SLSESTSTDIRNVIGFEFKPNVIRKLHPSVISGLFDDFPHHCSICGLKLKFQEQFNRHLE 887
Query: 550 WHATREREHSGLIKASRWYLKSSDWVVGKVESLSENEFADSVDRYGKETDRNQEDAMVLA 609
WHATRERE +GLI ASRWYLKSSDWV GK E SENEF DS+D ETD++QEDAMVLA
Sbjct: 888 WHATRERECTGLITASRWYLKSSDWVAGKAECPSENEFTDSLDSQDSETDKDQEDAMVLA 947
Query: 610 DENQCLCVLCGELFEEFYCQENGEWMFKGAVYVPNSDINDDMGIRDASTGGGPIIHARCL 669
DENQCLCVLCGELFE+ YC EN EWMFK AVY+ N+DI ++GI D +G GPIIH RCL
Sbjct: 948 DENQCLCVLCGELFEDVYCHENSEWMFKAAVYMTNADIATEVGINDVISGRGPIIHTRCL 1007
Query: 670 SENPVSSVL 678
S+ +SSV+
Sbjct: 1008 SDYSLSSVV 1016
>Medtr7g103840.2 | ENTH/VHS-like protein | HC | chr7:41991161-41998262
| 20130731
Length = 1028
Score = 522 bits (1345), Expect = e-148, Method: Compositional matrix adjust.
Identities = 326/743 (43%), Positives = 411/743 (55%), Gaps = 103/743 (13%)
Query: 2 GTGRTGGRVAELGSDKSGYNKAAGAGVAGTISGQRNGLSIKNNFLNTEA--SMILDARNQ 59
G GRTG R+ GVA T+SGQRNG S+K++F N EA S+ LDA N
Sbjct: 328 GVGRTGSRLI--------------GGVAETLSGQRNGFSLKHSFSNHEAPKSVNLDAHN- 372
Query: 60 PRQNINSLQRGVMSNSWKHSEEEEFMWDEMNAGLTGHDAASVPNNLSKDSWTSDDENLEV 119
++ MS +WK+SEEEEFMWDE+N GL+ + +V NNLS D W +DD+NLE
Sbjct: 373 -------IRSSAMSKNWKNSEEEEFMWDEVNPGLS-DNVPNVSNNLSSDQWMADDDNLES 424
Query: 120 EDNHHQSRNPFGANVDTEMSIESQATERKQLPAFRPHPSLSWKLQEQHSIDELNQKPGHS 179
ED H Q +P G V+ +S T +KQLP+ H SLSW+LQ+Q +LN KPGHS
Sbjct: 425 ED-HLQFTHPIGTKVNKGIS-----TVKKQLPSSGGHSSLSWELQKQVPSAKLNMKPGHS 478
Query: 180 DGFVSTLGALPTNTNSAATRMGNRSLLPKATIGLAGNLG--QLHSVGDESPSRESS-LRQ 236
+ FVS LP N NS+A R+ N+S +P TIG++ G Q S G ESPS +SS LRQ
Sbjct: 479 EIFVSAPSGLPKNPNSSAARIRNQSSMPHTTIGMSKITGQQQFDSEGTESPSEQSSPLRQ 538
Query: 237 QSP--------PP----------------------------------------VGKFHRS 248
QSP PP VG +S
Sbjct: 539 QSPKVPVTIRNPPSMRNLAEQDCPTTLKTSQHLGGLQSQYIRDPVPAIRSNVQVGNLRKS 598
Query: 249 QLRDLQSGSFSSMTFQPS-HKQQLGSSHTEVTAKTEKPHLSKVPLPRE---TEQPTTTRF 304
Q +D++ S+ +FQP +QQLGSS EVT K ++P SK PL + +E+ TT
Sbjct: 599 QEKDMRGPLSSATSFQPKPQQQQLGSSQAEVTLKAKQPLKSKAPLVKAKVTSEKSTTKCL 658
Query: 305 ETAAGKGGKLSNMPITNRLPTSRSLDTGKLPSILGDRPSQSSGSSPAGLXXXXXXXXXXX 364
+ K G + N IT R+LD PS +G +P++S G SPA L
Sbjct: 659 PAPSVKSGIIPNKSIT------RNLDASNRPSQIGVKPTRSGGPSPATL---ISSGSPAM 709
Query: 365 XLGRPKDNSSALPKIPPRRAAQPPRTSALPPASSNXXXXXX-XXXXXXXXXXXXXXXXXX 423
LG P D S LPK+P +A + S P SSN
Sbjct: 710 SLGSPDDYSPTLPKLPQGKAGKKQNDSTQPSTSSNNRGASAPSSNTANKNTLNPISNLLS 769
Query: 424 XXVAKGLISAETETTAKVPSEMLTRLEDQSDSITTXXXX-XXXXXXXXXXXXXXTKDEVD 482
VAKGLISA TE+ V SE + R +DQ++SI ++ E D
Sbjct: 770 SLVAKGLISAGTESATTVRSETVMRSKDQTESIAVSSSLPVASVPVSSAVPVKSSRIEAD 829
Query: 483 DGAKTPISLSESTSTEIRNFIGFEFKPDVIRELHPSVISGLFDDFPHHCSICSLKLKFQE 542
D AK ++LS+STSTEIRN IGF+FKPDVIRE+HP VI L D+ PHHC C ++LK QE
Sbjct: 830 DAAKASLALSQSTSTEIRNLIGFDFKPDVIREMHPHVIEELLDELPHHCGDCGIRLKQQE 889
Query: 543 QFDRHLEWHATREREHSGLIKAS-RWYLKSSDWVVGKVESLSENEFADSVDRY-GKETDR 600
QF+RHLEWHAT+ERE +GL AS RWY+ S DW+ K E LSE+EF DSVD Y +TD
Sbjct: 890 QFNRHLEWHATKEREQNGLTVASRRWYVTSDDWIASKAECLSESEFTDSVDEYDDNKTDG 949
Query: 601 NQEDAMVLADENQCLCVLCGELFEEFYCQENGEWMFKGAVYVPNSDINDDMGIRDASTGG 660
+Q D MV+ADENQCLCVLCGELFE+ YCQE EWMFKGAVY+ N D + +M R+
Sbjct: 950 SQLDTMVVADENQCLCVLCGELFEDVYCQERDEWMFKGAVYLNNPDSDSEMESRNV---- 1005
Query: 661 GPIIHARCLSENPVSSVLNMEQD 683
GPIIHARCLS+N + V N E D
Sbjct: 1006 GPIIHARCLSDNSILGVTNTEHD 1028
>Medtr7g103840.1 | ENTH/VHS-like protein | HC | chr7:41991606-41997500
| 20130731
Length = 1029
Score = 519 bits (1336), Expect = e-147, Method: Compositional matrix adjust.
Identities = 324/739 (43%), Positives = 409/739 (55%), Gaps = 103/739 (13%)
Query: 2 GTGRTGGRVAELGSDKSGYNKAAGAGVAGTISGQRNGLSIKNNFLNTEA--SMILDARNQ 59
G GRTG R+ GVA T+SGQRNG S+K++F N EA S+ LDA N
Sbjct: 326 GVGRTGSRLI--------------GGVAETLSGQRNGFSLKHSFSNHEAPKSVNLDAHN- 370
Query: 60 PRQNINSLQRGVMSNSWKHSEEEEFMWDEMNAGLTGHDAASVPNNLSKDSWTSDDENLEV 119
++ MS +WK+SEEEEFMWDE+N GL+ + +V NNLS D W +DD+NLE
Sbjct: 371 -------IRSSAMSKNWKNSEEEEFMWDEVNPGLS-DNVPNVSNNLSSDQWMADDDNLES 422
Query: 120 EDNHHQSRNPFGANVDTEMSIESQATERKQLPAFRPHPSLSWKLQEQHSIDELNQKPGHS 179
ED H Q +P G V+ +S T +KQLP+ H SLSW+LQ+Q +LN KPGHS
Sbjct: 423 ED-HLQFTHPIGTKVNKGIS-----TVKKQLPSSGGHSSLSWELQKQVPSAKLNMKPGHS 476
Query: 180 DGFVSTLGALPTNTNSAATRMGNRSLLPKATIGLAGNLG--QLHSVGDESPSRESS-LRQ 236
+ FVS LP N NS+A R+ N+S +P TIG++ G Q S G ESPS +SS LRQ
Sbjct: 477 EIFVSAPSGLPKNPNSSAARIRNQSSMPHTTIGMSKITGQQQFDSEGTESPSEQSSPLRQ 536
Query: 237 QSP--------PP----------------------------------------VGKFHRS 248
QSP PP VG +S
Sbjct: 537 QSPKVPVTIRNPPSMRNLAEQDCPTTLKTSQHLGGLQSQYIRDPVPAIRSNVQVGNLRKS 596
Query: 249 QLRDLQSGSFSSMTFQPS-HKQQLGSSHTEVTAKTEKPHLSKVPLPRE---TEQPTTTRF 304
Q +D++ S+ +FQP +QQLGSS EVT K ++P SK PL + +E+ TT
Sbjct: 597 QEKDMRGPLSSATSFQPKPQQQQLGSSQAEVTLKAKQPLKSKAPLVKAKVTSEKSTTKCL 656
Query: 305 ETAAGKGGKLSNMPITNRLPTSRSLDTGKLPSILGDRPSQSSGSSPAGLXXXXXXXXXXX 364
+ K G + N IT R+LD PS +G +P++S G SPA L
Sbjct: 657 PAPSVKSGIIPNKSIT------RNLDASNRPSQIGVKPTRSGGPSPATL---ISSGSPAM 707
Query: 365 XLGRPKDNSSALPKIPPRRAAQPPRTSALPPASSNXXXXXX-XXXXXXXXXXXXXXXXXX 423
LG P D S LPK+P +A + S P SSN
Sbjct: 708 SLGSPDDYSPTLPKLPQGKAGKKQNDSTQPSTSSNNRGASAPSSNTANKNTLNPISNLLS 767
Query: 424 XXVAKGLISAETETTAKVPSEMLTRLEDQSDSITTXXXX-XXXXXXXXXXXXXXTKDEVD 482
VAKGLISA TE+ V SE + R +DQ++SI ++ E D
Sbjct: 768 SLVAKGLISAGTESATTVRSETVMRSKDQTESIAVSSSLPVASVPVSSAVPVKSSRIEAD 827
Query: 483 DGAKTPISLSESTSTEIRNFIGFEFKPDVIRELHPSVISGLFDDFPHHCSICSLKLKFQE 542
D AK ++LS+STSTEIRN IGF+FKPDVIRE+HP VI L D+ PHHC C ++LK QE
Sbjct: 828 DAAKASLALSQSTSTEIRNLIGFDFKPDVIREMHPHVIEELLDELPHHCGDCGIRLKQQE 887
Query: 543 QFDRHLEWHATREREHSGLIKAS-RWYLKSSDWVVGKVESLSENEFADSVDRY-GKETDR 600
QF+RHLEWHAT+ERE +GL AS RWY+ S DW+ K E LSE+EF DSVD Y +TD
Sbjct: 888 QFNRHLEWHATKEREQNGLTVASRRWYVTSDDWIASKAECLSESEFTDSVDEYDDNKTDG 947
Query: 601 NQEDAMVLADENQCLCVLCGELFEEFYCQENGEWMFKGAVYVPNSDINDDMGIRDASTGG 660
+Q D MV+ADENQCLCVLCGELFE+ YCQE EWMFKGAVY+ N D + +M R+
Sbjct: 948 SQLDTMVVADENQCLCVLCGELFEDVYCQERDEWMFKGAVYLNNPDSDSEMESRNV---- 1003
Query: 661 GPIIHARCLSENPVSSVLN 679
GPIIHARCLS+N + V N
Sbjct: 1004 GPIIHARCLSDNSILGVTN 1022
>Medtr6g011450.2 | PCF11P-related protein | HC |
chr6:3248562-3252804 | 20130731
Length = 702
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 103/189 (54%), Gaps = 8/189 (4%)
Query: 485 AKTPISLSESTSTEIRNFIGFEFKPDVIRELHPSVISGLFDDFPHHCSICSLKLKFQEQF 544
A+ ISL+ ++ +F+G EF PD ++ H S IS L+ + P C+ C L+ K Q++
Sbjct: 494 AQGVISLTNQAPSQ--DFVGIEFDPDTLKVRHESAISALYGNLPRQCTTCGLRFKSQDEH 551
Query: 545 DRHLEWHATRER--EHSGLIKASRWYLKSSDWVVGKVESLSENEFADSVDRYGKETDRNQ 602
H++WH T+ R ++ + +W++ + W+ G E+L + E +
Sbjct: 552 SSHMDWHVTKNRMSKNRKQKPSRKWFVSETMWLSG-AEALGTESAPGFLPTETTEEKKED 610
Query: 603 EDAMVLADENQCLCVLCGELFEEFYCQENGEWMFKGAVYVPNSDINDDMGIRDASTGGGP 662
E+ V ADE+Q C LCGE FEEFY E EWM++GAVY+ N+ G+ + G
Sbjct: 611 EELAVPADEDQNTCALCGEPFEEFYSDETEEWMYRGAVYL-NAPNGITTGMDRSQLGS-- 667
Query: 663 IIHARCLSE 671
IIHA+C SE
Sbjct: 668 IIHAKCRSE 676
>Medtr6g011450.1 | PCF11P-related protein | HC |
chr6:3246456-3252804 | 20130731
Length = 840
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 103/189 (54%), Gaps = 8/189 (4%)
Query: 485 AKTPISLSESTSTEIRNFIGFEFKPDVIRELHPSVISGLFDDFPHHCSICSLKLKFQEQF 544
A+ ISL+ ++ +F+G EF PD ++ H S IS L+ + P C+ C L+ K Q++
Sbjct: 632 AQGVISLTNQAPSQ--DFVGIEFDPDTLKVRHESAISALYGNLPRQCTTCGLRFKSQDEH 689
Query: 545 DRHLEWHATRER--EHSGLIKASRWYLKSSDWVVGKVESLSENEFADSVDRYGKETDRNQ 602
H++WH T+ R ++ + +W++ + W+ G E+L + E +
Sbjct: 690 SSHMDWHVTKNRMSKNRKQKPSRKWFVSETMWLSG-AEALGTESAPGFLPTETTEEKKED 748
Query: 603 EDAMVLADENQCLCVLCGELFEEFYCQENGEWMFKGAVYVPNSDINDDMGIRDASTGGGP 662
E+ V ADE+Q C LCGE FEEFY E EWM++GAVY+ N+ G+ + G
Sbjct: 749 EELAVPADEDQNTCALCGEPFEEFYSDETEEWMYRGAVYL-NAPNGITTGMDRSQLGS-- 805
Query: 663 IIHARCLSE 671
IIHA+C SE
Sbjct: 806 IIHAKCRSE 814
>Medtr4g073340.1 | hypothetical protein | HC |
chr4:27754923-27752645 | 20130731
Length = 521
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 102/196 (52%), Gaps = 10/196 (5%)
Query: 491 LSESTSTEIRNFIGFEFKPDVIRELHPSVISGLFDDFPHHCSICSLKLKFQEQFDRHLEW 550
+S + ++F+G EF P+ ++ H S IS L+ D P C+ C L+ K Q++ H++W
Sbjct: 317 ISLTNQAPAQDFVGIEFDPNTLKVRHESAISALYGDLPRQCTTCGLRFKSQDEHRSHMDW 376
Query: 551 HATREREHSGLI-KASR-WYLKSSDWVVGKVESLSENEFADSVDRYGKETDRNQEDAMVL 608
H T+ R K SR W++ + W+ G E+L D + E + E V
Sbjct: 377 HVTKNRMSKNRKQKPSRMWFVSETMWLSG-AEALGAESALDFLLTETTEEKKEDEKLAVP 435
Query: 609 ADENQCLCVLCGELFEEFYCQENGEWMFKGAVYV--PNSDINDDMGIRDASTGGGPIIHA 666
DE+Q C LC E FEEFY E +WM++GAVY+ PN I M + PIIHA
Sbjct: 436 PDEDQNTCALCREPFEEFYSDETEDWMYRGAVYLNMPNG-ITTGMAMSQLC----PIIHA 490
Query: 667 RCLSENPVSSVLNMEQ 682
+C SE+ S V +++
Sbjct: 491 KCRSESTPSEVFVIDE 506
>Medtr6g011470.1 | PCF11P-related protein | HC |
chr6:3262423-3263241 | 20130731
Length = 210
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 73/147 (49%), Gaps = 10/147 (6%)
Query: 528 PHHCSICSLKLKFQEQFDRHLEWHATREREHSGLI-KASR-WYLKSSDWVVGKVESLSEN 585
P C+ C L+LK +++ H++WH T+ R K SR W++ W+ G E+L
Sbjct: 70 PAECTTCGLRLKSKDEHSSHMDWHVTKNRMSKNCKQKPSRMWFVSEMMWLKG-AETLGVK 128
Query: 586 EFADSVDRYGKETDRNQEDAMVLADENQCLCVLCGELFEEFYCQENGEWMFKGAVYV--P 643
+ E R ED V ADE+Q C LCGE + FY E +WM + AVY+ P
Sbjct: 129 SAPGFLPTETTEEKREDEDLAVPADEDQNTCALCGEPLDVFYSDETEDWMCRVAVYLNAP 188
Query: 644 NSDINDDMGIRDASTGGGPIIHARCLS 670
N I M + GPIIHA+C S
Sbjct: 189 NG-ITTGMDMSQL----GPIIHAKCRS 210