Miyakogusa Predicted Gene
- Lj5g3v0068810.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0068810.1 Non Chatacterized Hit- tr|K4B4V9|K4B4V9_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,35.76,1e-18,Myb_DNA-bind_3,Myb/SANT-like domain;
seg,NULL,CUFF.52471.1
(966 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65060 weakly similar to UniRef100_A7QL36 Cluster: Chr... 1162 0.0
gnl|LJGI|BP065477 882 0.0
gnl|LJGI|TC76662 weakly similar to UniRef100_A7QL36 Cluster: Chr... 672 0.0
gnl|LJGI|TC66146 weakly similar to UniRef100_A7P5I3 Cluster: Chr... 147 1e-34
>gnl|LJGI|TC65060 weakly similar to UniRef100_A7QL36 Cluster: Chromosome undetermined
scaffold_116, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_116,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (6%)
Length = 787
Score = 1162 bits (586), Expect = 0.0
Identities = 606/615 (98%)
Strand = Plus / Plus
Query: 352 cctgttgcagttggtttgtatggcaaaccgtttcctcactttgatagtctggatattgtg 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctgttgcagttggtttgtatggcaaaccgtttcctcactttgatagtctggatattgtg 60
Query: 412 tttgggaaagatagggcaacaggaactcatgcagaaagtccagctgatgccgcatttgct 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttgggaaagatagggcaacaggaactcatgcagaaagtccagctgatgccgcatttgct 120
Query: 472 atgatgaaggagttttttccaacagaagaaggtggtgagcctgaagtaaatttgaatgaa 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgatgaaggagttttttccaacagaagaaggtggtgagcctgaagtaaatttgaatgaa 180
Query: 532 gatgataacaacaacattgagtctcaattcccagaagtacctacatatgacaacactcaa 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatgataacaacaacattgagtctcaattcccagaagtacctacatatgacaacactcaa 240
Query: 592 ggagcaagaccaatgggtcatgatgcttctggatctagaggtggacggcgtgggggtaaa 651
||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 241 ggagcaagaccaatgggtcttgatgcttctggatctagaggtggacggcgtgggtgtaaa 300
Query: 652 aaagccaagcagaatgatgacattagtgaaagcttagccaattcaatgagcaaatttggt 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaagccaagcagaatgatgacattagtgaaagcttagccaattcaatgagcaaatttggt 360
Query: 712 gagttctatgctggaactgttgagaatattaaccgactaacatcttgctttttacctgag 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagttctatgctggaactgttgagaatattaaccgactaacatcttgctttttacctgag 420
Query: 772 aaagagacagctgatcggaggactcaagtttactcaatgttaagagaaattgaaggattg 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaagagacagctgatcggaggactcaagtttactcaatgttaagagaaattgaaggattg 480
Query: 832 tctaacgcggatgtgataaaggcagctatattgatcaccaacaacagtaatctgagcgac 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tctaacgcggatgtgataaaggcagctatattgatcaccaacaacagtaatctgagcgac 540
Query: 892 tgcnnnnnnnctgttgatacactcgaaatgaaggaggaattcgtgcgctatgttttgaat 951
||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgctttttttctgttgatacactcgaaatgaaggaggaattcgtgcgctatgttttgaat 600
Query: 952 aacaatggtgtttga 966
|||||||||||||||
Sbjct: 601 aacaatggtgtttga 615
>gnl|LJGI|BP065477
Length = 549
Score = 882 bits (445), Expect = 0.0
Identities = 488/505 (96%), Gaps = 5/505 (0%)
Strand = Plus / Minus
Query: 467 ttgctatgatgaaggagttttttccaacagaagaaggtggtgagcctgaagtaaatttga 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ttgctatgatgaaggagttttttccaacagaagaaggtggtgagcctgaagtaaatttga 490
Query: 527 atgaagatgataacaacaacattgagtctcaattcccagaagtacctacatatgacaaca 586
|||||||||||||| || |||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 489 atgaagatgataacgaccacattgagtctcgattcccagaagtacctacatatgaccaca 430
Query: 587 ctcaaggagcaagaccaatgggtcatgatgcttctggatctagaggtggacggcgtgggg 646
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ctcaaggagcaagaccnatgggtcatgatgcttctggatctagaggtggacggcgtgggg 370
Query: 647 gtaaaaaagccaagcagaatgatgacattagtgaaagcttagccaattcaatgagcaaat 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gtaaaaaagccaagcagaatgatgacattagtgaaagcttagccaattcaatgagcaaat 310
Query: 707 ttggtgagttctatgctggaactgttgagaatattaaccgactaacatcttgctttttac 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ttggtgagttctatgctggaactgttgagaatattaaccgactaacatcttgctttttac 250
Query: 767 ctgagaaagagacagctgatcggaggactcaagtttactcaatgttaagagaaattgaag 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ctgagaaagagacagctgatcggaggactcaagtttactcaatgttaagagaaattgaag 190
Query: 827 gattgtctaacgcggatgtgataaaggcagctatattgatcaccaacaacagtaatctga 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gattgtctaacgcggatgtgataaaggcagctatattgatcaccaacaacagtaatctga 130
Query: 887 gcgactgc-----nnnnnnnctgttgatacactcgaaatgaaggaggaattcgtgcgcta 941
|||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gcgactgcttttttttttttctgttgatacactcgaaatgaaggaggaattcgtgcgcta 70
Query: 942 tgttttgaataacaatggtgtttga 966
|||||||||||||||||||||||||
Sbjct: 69 tgttttgaataacaatggtgtttga 45
>gnl|LJGI|TC76662 weakly similar to UniRef100_A7QL36 Cluster: Chromosome undetermined
scaffold_116, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_116,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (12%)
Length = 641
Score = 672 bits (339), Expect = 0.0
Identities = 345/347 (99%)
Strand = Plus / Plus
Query: 180 ttgcaaactgaaagcaagtcctcacatcgaatcaagagtaaagcatatcaagaagcaata 239
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 46 ttgcaaactgaaagcaagtcctcacatcgaatcaagagtaaagcctatcaagaagcaata 105
Query: 240 ttttgcaatcaaagatatgtttggtccaagtgcaagtggttttgggtgggatcctactag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 ttttgcaatcaaagatatgtttggtccaagtgcaagtggttttgggtgggatcctactag 165
Query: 300 gaatatgattgtggtagaaagagaaatatacagagaatggtgcaagtcacaccctgttgc 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 166 gaatatgattgtggtagaaagagaaatatacagagaatggtgcaagtcacaccctgctgc 225
Query: 360 agttggtttgtatggcaaaccgtttcctcactttgatagtctggatattgtgtttgggaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 agttggtttgtatggcaaaccgtttcctcactttgatagtctggatattgtgtttgggaa 285
Query: 420 agatagggcaacaggaactcatgcagaaagtccagctgatgccgcatttgctatgatgaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 agatagggcaacaggaactcatgcagaaagtccagctgatgccgcatttgctatgatgaa 345
Query: 480 ggagttttttccaacagaagaaggtggtgagcctgaagtaaatttga 526
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ggagttttttccaacagaagaaggtggtgagcctgaagtaaatttga 392
Score = 500 bits (252), Expect = e-141
Identities = 252/252 (100%)
Strand = Plus / Plus
Query: 612 tgatgcttctggatctagaggtggacggcgtgggggtaaaaaagccaagcagaatgatga 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tgatgcttctggatctagaggtggacggcgtgggggtaaaaaagccaagcagaatgatga 449
Query: 672 cattagtgaaagcttagccaattcaatgagcaaatttggtgagttctatgctggaactgt 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 cattagtgaaagcttagccaattcaatgagcaaatttggtgagttctatgctggaactgt 509
Query: 732 tgagaatattaaccgactaacatcttgctttttacctgagaaagagacagctgatcggag 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tgagaatattaaccgactaacatcttgctttttacctgagaaagagacagctgatcggag 569
Query: 792 gactcaagtttactcaatgttaagagaaattgaaggattgtctaacgcggatgtgataaa 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gactcaagtttactcaatgttaagagaaattgaaggattgtctaacgcggatgtgataaa 629
Query: 852 ggcagctatatt 863
||||||||||||
Sbjct: 630 ggcagctatatt 641
Score = 85.7 bits (43), Expect = 5e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 37 cgacaatggactgcagaagaagatgcagtattggtggctggtttgttgcaa 87
||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 cgacaatggaccgcagaagaagatgcagtattggtggttggtttgttgcaa 51
>gnl|LJGI|TC66146 weakly similar to UniRef100_A7P5I3 Cluster: Chromosome chr4
scaffold_6, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 849
Score = 147 bits (74), Expect = 1e-34
Identities = 158/186 (84%)
Strand = Plus / Plus
Query: 616 gcttctggatctagaggtggacggcgtgggggtaaaaaagccaagcagaatgatgacatt 675
||||||| ||||||||||||| | |||||||| |||||||||| || || |||||||||
Sbjct: 121 gcttctgcatctagaggtggaagacgtggggggaaaaaagccacacacaacgatgacatt 180
Query: 676 agtgaaagcttagccaattcaatgagcaaatttggtgagttctatgctggaactgttgag 735
||| ||||||| || ||| ||| |||||| |||||||| ||||||||||||||||
Sbjct: 181 tctgagagcttagtcacttctctgaacaaattaggtgagttttatgctggaactgttggt 240
Query: 736 aatattaaccgactaacatcttgctttttacctgagaaagagacagctgatcggaggact 795
||||| | | |||||||||||||||||||||||||||| | || ||||||||||||| |
Sbjct: 241 aatatgcaacaactaacatcttgctttttacctgagaaacaaactgctgatcggaggagt 300
Query: 796 caagtt 801
||||||
Sbjct: 301 caagtt 306