Miyakogusa Predicted Gene
- Lj4g3v3113960.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v3113960.2 Non Chatacterized Hit- tr|B9S0V4|B9S0V4_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,58.43,3e-19,FAMILY NOT NAMED,NULL; DUF599,Protein of unknown
function DUF599; seg,NULL,CUFF.52387.2
(312 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66519 similar to UniRef100_A7PGZ2 Cluster: Chromosome... 507 e-143
gnl|LJGI|FS329975 similar to UniRef100_A7PGZ2 Cluster: Chromosom... 266 7e-71
gnl|LJGI|TC65374 similar to UniRef100_A7PGZ2 Cluster: Chromosome... 266 7e-71
gnl|LJGI|TC67047 similar to UniRef100_A7PGZ2 Cluster: Chromosome... 216 6e-56
gnl|LJGI|TC63642 weakly similar to UniRef100_A7PGZ2 Cluster: Chr... 135 2e-31
gnl|LJGI|BW599671 similar to UniRef100_A7PGZ2 Cluster: Chromosom... 111 3e-24
gnl|LJGI|TC74236 weakly similar to UniRef100_A7PGZ2 Cluster: Chr... 52 2e-06
>gnl|LJGI|TC66519 similar to UniRef100_A7PGZ2 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (83%)
Length = 972
Score = 507 bits (256), Expect = e-143
Identities = 256/256 (100%)
Strand = Plus / Plus
Query: 1 atgaatgatcccttgaaaaatggtattttagctgttcaaacaatccgcaacaatatgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 atgaatgatcccttgaaaaatggtattttagctgttcaaacaatccgcaacaatatgatg 195
Query: 61 gcatccactcttcttgctacaactgcaatcacactcagttcactaattggtgttttcgcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gcatccactcttcttgctacaactgcaatcacactcagttcactaattggtgttttcgcg 255
Query: 121 agcaatgacttagaaacccaattagtttatggaaacagaacttccattactgcttcaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 agcaatgacttagaaacccaattagtttatggaaacagaacttccattactgcttcaatc 315
Query: 181 aaacgcctttctatgtcgctatgcttccttgtcgcatttctatgtaacatgcagtctatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aaacgcctttctatgtcgctatgcttccttgtcgcatttctatgtaacatgcagtctatc 375
Query: 241 agatactatgcacagg 256
||||||||||||||||
Sbjct: 376 agatactatgcacagg 391
Score = 123 bits (62), Expect = 7e-28
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 251 cacaggatcttcacattaagtcattcaaaaggagggaaagtgaagatgtggaagcagcat 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 cacaggatcttcacattaagtcattcaaaaggagggaaagtgaagatgtggaagcagcat 673
Query: 311 ag 312
||
Sbjct: 674 ag 675
>gnl|LJGI|FS329975 similar to UniRef100_A7PGZ2 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (65%)
Length = 827
Score = 266 bits (134), Expect = 7e-71
Identities = 225/256 (87%), Gaps = 12/256 (4%)
Strand = Plus / Plus
Query: 1 atgaatgatcccttgaaaaatggtattttagctgttcaaacaatccgcaacaatatgatg 60
||||||||||||||||||||||| ||||| | ||||||||||||| ||||| ||||||
Sbjct: 438 atgaatgatcccttgaaaaatggcattttgggcattcaaacaatccggaacaacatgatg 497
Query: 61 gcatccactcttcttgctacaactgcaatcacactcagttcactaattggtgttttcgcg 120
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 498 gcatccactcttcttgctacaactgcaatcacactcagctcactaattggcgttttcgcg 557
Query: 121 agcaatgacttagaaacccaattagtttatggaaacagaacttccattactgcttcaatc 180
|||||||||| ||| ||| || ||| | ||| ||||||||| |||||||
Sbjct: 558 agcaatgact--------caa----tttttgaaaataatactcccattactgattcaatc 605
Query: 181 aaacgcctttctatgtcgctatgcttccttgtcgcatttctatgtaacatgcagtctatc 240
|||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||
Sbjct: 606 aaacgcctttctatgtcgttatgcttcctttttgcatttctatgtaacatgcagtctatc 665
Query: 241 agatactatgcacagg 256
||||||||||||||||
Sbjct: 666 agatactatgcacagg 681
>gnl|LJGI|TC65374 similar to UniRef100_A7PGZ2 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (82%)
Length = 1236
Score = 266 bits (134), Expect = 7e-71
Identities = 225/256 (87%), Gaps = 12/256 (4%)
Strand = Plus / Plus
Query: 1 atgaatgatcccttgaaaaatggtattttagctgttcaaacaatccgcaacaatatgatg 60
||||||||||||||||||||||| ||||| | ||||||||||||| ||||| ||||||
Sbjct: 390 atgaatgatcccttgaaaaatggcattttgggcattcaaacaatccggaacaacatgatg 449
Query: 61 gcatccactcttcttgctacaactgcaatcacactcagttcactaattggtgttttcgcg 120
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 450 gcatccactcttcttgctacaactgcaatcacactcagctcactaattggcgttttcgcg 509
Query: 121 agcaatgacttagaaacccaattagtttatggaaacagaacttccattactgcttcaatc 180
|||||||||| ||| ||| || ||| | ||| ||||||||| |||||||
Sbjct: 510 agcaatgact--------caa----tttttgaaaataatactcccattactgattcaatc 557
Query: 181 aaacgcctttctatgtcgctatgcttccttgtcgcatttctatgtaacatgcagtctatc 240
|||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||
Sbjct: 558 aaacgcctttctatgtcgttatgcttcctttttgcatttctatgtaacatgcagtctatc 617
Query: 241 agatactatgcacagg 256
||||||||||||||||
Sbjct: 618 agatactatgcacagg 633
>gnl|LJGI|TC67047 similar to UniRef100_A7PGZ2 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 799
Score = 216 bits (109), Expect = 6e-56
Identities = 213/247 (86%), Gaps = 3/247 (1%)
Strand = Plus / Plus
Query: 13 ttgaaaaatggtattttagctgttcaaacaatccgcaacaatatgatggcatccactctt 72
|||||||||||| |||| || ||||||||||||||||||||||| ||||| || ||||||
Sbjct: 441 ttgaaaaatggtgttttggccgttcaaacaatccgcaacaatatcatggcttctactctt 500
Query: 73 cttgctacaactgcaatcacactcagttcactaattggtgttttcgcgagcaatgac--- 129
|||||||||||||||||||||||||||||||| ||||| || || ||||||||||||
Sbjct: 501 cttgctacaactgcaatcacactcagttcacttattggcgtctttgcgagcaatgacaca 560
Query: 130 ttagaaacccaattagtttatggaaacagaacttccattactgcttcaatcaaacgcctt 189
|||| || ||||| |||| |||||| ||||||| ||| | |||||||||||||||||
Sbjct: 561 gaagaatccaaattaatttacagaaacaaaacttcccttaattcttcaatcaaacgcctt 620
Query: 190 tctatgtcgctatgcttccttgtcgcatttctatgtaacatgcagtctatcagatactat 249
| || || ||||||||||||| |||||||||||| | |||||||||| |||||||||
Sbjct: 621 tgcatatcagtatgcttccttgttgcatttctatgtgatgtgcagtctataagatactat 680
Query: 250 gcacagg 256
|||||||
Sbjct: 681 gcacagg 687
>gnl|LJGI|TC63642 weakly similar to UniRef100_A7PGZ2 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (80%)
Length = 1036
Score = 135 bits (68), Expect = 2e-31
Identities = 92/100 (92%)
Strand = Plus / Plus
Query: 28 ttagctgttcaaacaatccgcaacaatatgatggcatccactcttcttgctacaactgca 87
|||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 466 ttagctgttcaaactatccgcaacaatatcatggcatccactcttcttgctacaacagca 525
Query: 88 atcacactcagttcactaattggtgttttcgcgagcaatg 127
|||||||||| |||||| |||||| |||| || |||||||
Sbjct: 526 atcacactcacttcactgattggtatttttgctagcaatg 565
>gnl|LJGI|BW599671 similar to UniRef100_A7PGZ2 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 405
Score = 111 bits (56), Expect = 3e-24
Identities = 77/84 (91%)
Strand = Plus / Plus
Query: 1 atgaatgatcccttgaaaaatggtattttagctgttcaaacaatccgcaacaatatgatg 60
||||||||||||||||||||||| ||||| | ||||||||||||| ||||| ||||||
Sbjct: 322 atgaatgatcccttgaaaaatggcattttgggcattcaaacaatccggaacaacatgatg 381
Query: 61 gcatccactcttcttgctacaact 84
||||||||||||||||||||||||
Sbjct: 382 gcatccactcttcttgctacaact 405
>gnl|LJGI|TC74236 weakly similar to UniRef100_A7PGZ2 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 591
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 251 cacaggatcttcacattaagtcattcaaaaggagggaaagtgaagatgtggaagcagcat 310
|||| ||||| |||| ||||||||||||| || || |||||||| |||||||||| |||
Sbjct: 505 cacaagatctccacactaagtcattcaaagagaaggtaagtgaaggtgtggaagcaccat 446
Query: 311 ag 312
||
Sbjct: 445 ag 444