Miyakogusa Predicted Gene
- Lj4g3v3113310.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v3113310.1 tr|G7LBG4|G7LBG4_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_8g1,81.92,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
PPR: pentatricopeptide repeat domain,Pentatricopept,CUFF.52337.1
(709 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 808 0.0
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 490 e-138
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 486 e-137
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 483 e-136
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 473 e-133
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 462 e-130
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 462 e-130
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 458 e-129
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 456 e-128
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 453 e-127
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 449 e-126
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 449 e-126
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 446 e-125
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 445 e-125
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 444 e-124
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 444 e-124
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 442 e-124
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 436 e-122
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 436 e-122
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 430 e-120
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 430 e-120
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 429 e-120
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 427 e-120
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 427 e-119
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 426 e-119
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 426 e-119
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 425 e-119
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 424 e-118
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 423 e-118
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 423 e-118
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 421 e-117
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 421 e-117
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 418 e-117
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 417 e-116
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 417 e-116
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 416 e-116
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 415 e-116
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 415 e-116
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 414 e-115
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 412 e-115
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 412 e-115
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 412 e-115
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 410 e-114
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 408 e-114
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 407 e-113
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 402 e-112
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 402 e-112
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 402 e-112
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 399 e-111
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 397 e-110
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 395 e-110
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 394 e-109
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 393 e-109
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 392 e-109
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 392 e-109
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 390 e-108
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 389 e-108
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 387 e-107
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 386 e-107
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 383 e-106
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 383 e-106
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 382 e-106
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 381 e-106
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 380 e-105
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 380 e-105
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 379 e-105
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 379 e-105
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 378 e-105
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 377 e-104
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 374 e-103
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 372 e-103
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 370 e-102
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 363 e-100
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 363 e-100
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 363 e-100
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 357 1e-98
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 357 2e-98
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 349 4e-96
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 347 1e-95
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 337 2e-92
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 2e-92
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 336 3e-92
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 4e-92
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 1e-91
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 333 2e-91
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 3e-90
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 1e-89
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 2e-89
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 325 7e-89
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 323 4e-88
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 1e-87
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 6e-87
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 7e-87
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 1e-86
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 316 3e-86
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 315 9e-86
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 1e-85
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 8e-84
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 307 2e-83
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 4e-83
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 4e-83
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 2e-82
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 303 2e-82
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 3e-82
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 303 4e-82
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 302 5e-82
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 301 1e-81
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 2e-81
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 3e-81
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 4e-81
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 8e-81
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 297 1e-80
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 2e-80
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 2e-79
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 293 2e-79
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 292 6e-79
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 292 6e-79
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 291 7e-79
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 291 1e-78
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 290 3e-78
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 4e-78
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 289 4e-78
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 288 8e-78
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 1e-77
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 287 2e-77
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 5e-77
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 2e-76
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 3e-76
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 4e-76
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 9e-76
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 5e-75
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 279 5e-75
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 7e-75
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 7e-75
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 2e-74
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 276 4e-74
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 1e-73
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 274 1e-73
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 5e-72
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 265 8e-71
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 8e-70
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 261 1e-69
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 2e-69
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 260 2e-69
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 8e-69
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 2e-68
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 4e-68
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 254 1e-67
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 253 3e-67
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 1e-66
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 3e-66
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 1e-65
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 3e-65
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 4e-65
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 2e-64
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 2e-64
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 3e-64
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 8e-64
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 9e-64
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 240 3e-63
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 4e-62
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 5e-62
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 2e-61
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 232 6e-61
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 3e-60
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 4e-59
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 223 3e-58
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 3e-58
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 4e-58
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 7e-58
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 2e-57
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 3e-57
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 5e-57
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 9e-57
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 5e-56
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 7e-56
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 1e-55
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 2e-51
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 196 4e-50
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 4e-50
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 8e-50
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 3e-48
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 2e-41
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 1e-40
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 4e-39
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 9e-22
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 6e-20
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 7e-19
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 2e-18
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 5e-18
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 6e-18
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 1e-17
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 88 2e-17
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 87 3e-17
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 6e-17
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 1e-16
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 85 2e-16
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 5e-16
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 83 5e-16
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 6e-16
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 78 2e-14
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 78 3e-14
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 76 8e-14
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 1e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 76 1e-13
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 76 1e-13
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 75 2e-13
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-13
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 2e-12
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 72 2e-12
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 3e-12
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-12
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 4e-12
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 70 4e-12
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 7e-12
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 7e-12
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 9e-12
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 68 2e-11
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 68 3e-11
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 1e-10
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 65 1e-10
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 6e-10
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 63 9e-10
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 62 1e-09
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 61 2e-09
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 60 7e-09
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 7e-09
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 59 8e-09
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 57 6e-08
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 55 1e-07
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 55 2e-07
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 53 6e-07
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-07
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 9e-07
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 52 1e-06
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 52 2e-06
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 51 3e-06
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 4e-06
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 808 bits (2088), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/716 (56%), Positives = 487/716 (68%), Gaps = 13/716 (1%)
Query: 6 MSSIQDAITRILRNPNTVTSTHHAKQLHAHILKTRGTLHXXXXXXXXXXXXXXXXXXXXX 65
MSS + I +++NP + S AKQLHA ++T+ H
Sbjct: 1 MSSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALL 60
Query: 66 XXXXXXXXXXXXXXXXXIKCXXXXXXXXXXXXXXNAMRALGISPTRHFFPSLLKASTXXX 125
I+C MRA G P + FPS+LK+ T
Sbjct: 61 LFKTLKSPPVLAWKSV-IRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMM 119
Query: 126 XXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCE 185
G+D DLYT NALMNMY K+ +G S VFDE PQR E
Sbjct: 120 DLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDE 179
Query: 186 ------------IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLK 233
IDSVR+VF++MP +DVVS+NT+IAG AQ+GM+ +AL MVREMG LK
Sbjct: 180 DVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLK 239
Query: 234 PDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRA 293
PDSFTLSS+LPIF+E+VDV+KG EIHGY IR G D DV+IGSSL+DMYAK R+E S R
Sbjct: 240 PDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERV 299
Query: 294 FYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTAL 353
F L RD ISWNS++AG VQNG++++ + FRQM+ AKVKP V+FSSVIPACAHL L
Sbjct: 300 FSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATL 359
Query: 354 NLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGC 413
+LGKQLHG ++R GF N FIAS+LVDMY+KCGNIK AR IFD++ D V+WTAIIMG
Sbjct: 360 HLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGH 419
Query: 414 AMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPG 473
A+HGH +AVSLFE+M GV+P VAF+AVLTACSH GLVDE W YFNSM K + +
Sbjct: 420 ALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQE 479
Query: 474 LEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKIL 533
LEHYAAVADLLGRAG+LEEAY+FIS M ++PTGSVWSTLL++C HK++ELAEKV +KI
Sbjct: 480 LEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIF 539
Query: 534 LVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGD 593
VD ENMGAYVLM N+Y++ RWK+ AKLR+ MR KGL+K PACSWIE+ NK H F++GD
Sbjct: 540 TVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGD 599
Query: 594 KSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXX 653
+SHP DKINE L ++EQMEKEGYV DTS VLHDVD+E+KR+LL HSERLA+AF
Sbjct: 600 RSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIIN 659
Query: 654 XXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
RV KNIR+C DCH AIKFISKI REI+VRDNSRFHHF G+CSCGDYW
Sbjct: 660 TEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 490 bits (1262), Expect = e-138, Method: Compositional matrix adjust.
Identities = 246/620 (39%), Positives = 382/620 (61%), Gaps = 15/620 (2%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M +LG+ P + FP +LK+ G D DLY +L++MY VQN
Sbjct: 125 MISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMY--VQN 182
Query: 162 LGGFGSANKVFDENPQR----------GKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGN 211
G A+KVFD++P R G + I++ +K+FD +P +DVVSWN +I+G
Sbjct: 183 -GRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGY 241
Query: 212 AQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDV 271
A+ G ++EAL++ ++M ++PD T+ +++ A+ + G ++H + HGF ++
Sbjct: 242 AETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNL 301
Query: 272 FIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKA 331
I ++LID+Y+KC +E + F LPY+D ISWN++I G + + + F++ML++
Sbjct: 302 KIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 361
Query: 332 KVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRL--GFDDNKFIASSLVDMYAKCGNIK 389
P V+ S++PACAHL A+++G+ +H I + G + + +SL+DMYAKCG+I+
Sbjct: 362 GETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIE 421
Query: 390 MARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACS 449
A +F+ I + + +W A+I G AMHG A + LF +M + G++P + F+ +L+ACS
Sbjct: 422 AAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACS 481
Query: 450 HAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVW 509
H+G++D G F +M +D+++ P LEHY + DLLG +G +EA + I+ M ++P G +W
Sbjct: 482 HSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIW 541
Query: 510 STLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSK 569
+LL AC+ H +VEL E + ++ ++PEN G+YVL+SNIY++A RW + AK R + K
Sbjct: 542 CSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDK 601
Query: 570 GLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDV 629
G+KK P CS IEI + VH F+ GDK HP +I L + +EK G+V DTSEVL ++
Sbjct: 602 GMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEM 661
Query: 630 DDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVV 689
++E+K LR HSE+LAIAF ++KN+RVC +CH A K ISKI REI+
Sbjct: 662 EEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIA 721
Query: 690 RDNSRFHHFMNGSCSCGDYW 709
RD +RFHHF +G CSC DYW
Sbjct: 722 RDRTRFHHFRDGVCSCNDYW 741
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 486 bits (1250), Expect = e-137, Method: Compositional matrix adjust.
Identities = 254/621 (40%), Positives = 372/621 (59%), Gaps = 37/621 (5%)
Query: 100 NAMRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKV 159
++MR L + PTR FP +KA + G D++ ++AL+ MY
Sbjct: 65 SSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTC 124
Query: 160 QNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFRE 219
L + RKVFD +P R++VSW ++I G NG +
Sbjct: 125 GKL------------------------EDARKVFDEIPKRNIVSWTSMIRGYDLNGNALD 160
Query: 220 ALDMVREM------GDDKLKPDSFTLSSILPIFAEHVDVVKGM--EIHGYAIRHGFDGDV 271
A+ + +++ DD + DS L S++ + KG+ IH + I+ GFD V
Sbjct: 161 AVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVP--AKGLTESIHSFVIKRGFDRGV 218
Query: 272 FIGSSLIDMYAKCNR--VEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQML 329
+G++L+D YAK V + + F + +D +S+NSI++ Q+G ++ FR+++
Sbjct: 219 SVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLV 278
Query: 330 KAKVKPMQ-VSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNI 388
K KV ++ S+V+ A +H AL +GK +H +IR+G +D+ + +S++DMY KCG +
Sbjct: 279 KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRV 338
Query: 389 KMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTAC 448
+ AR FD+++ +++ +WTA+I G MHGHA A+ LF M++ GVRP Y+ F++VL AC
Sbjct: 339 ETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC 398
Query: 449 SHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSV 508
SHAGL EGW++FN+M+ F + PGLEHY + DLLGRAG L++AYD I M ++P +
Sbjct: 399 SHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSII 458
Query: 509 WSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRS 568
WS+LLAACR HK+VELAE V ++ +D N G Y+L+S+IY+ A RWKD ++R+ M++
Sbjct: 459 WSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKN 518
Query: 569 KGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHD 628
+GL K P S +E+ +VH FL GD+ HP +KI E L L ++ + GYV +TS V HD
Sbjct: 519 RGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHD 578
Query: 629 VDDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIV 688
VD+E K LR HSE+LAIAF V+KN+RVC DCH IK ISKIV RE V
Sbjct: 579 VDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFV 638
Query: 689 VRDNSRFHHFMNGSCSCGDYW 709
VRD RFHHF +G CSCGDYW
Sbjct: 639 VRDAKRFHHFKDGGCSCGDYW 659
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 172/351 (49%), Gaps = 29/351 (8%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
DV SWN+VIA A++G EAL M L P + + + D+ G + H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFD 319
A G+ D+F+ S+LI MY+ C ++E + + F +P R+ +SW S+I G NG
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 320 QGIGFFRQMLKAKVKPMQVSF------SSVIPACAHLTALNLGKQLHGCIIRLGFDDNKF 373
+ F+ +L + F SVI AC+ + A L + +H +I+ GFD
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 374 IASSLVDMYAKCGN--IKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLE 431
+ ++L+D YAK G + +AR IFD+I +D V++ +I+ A G + +A +F ++++
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 432 DGVRPC-YVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEH----YAAVADLLGR 486
+ V + VL A SH+G + G D I GLE ++ D+ +
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIG-----KCIHDQVIRMGLEDDVIVGTSIIDMYCK 334
Query: 487 AGRLE---EAYDFISNMGIQPTGSVWSTLLAACRAH----KSVELAEKVVD 530
GR+E +A+D + N ++ W+ ++A H K++EL ++D
Sbjct: 335 CGRVETARKAFDRMKNKNVRS----WTAMIAGYGMHGHAAKALELFPAMID 381
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 483 bits (1244), Expect = e-136, Method: Compositional matrix adjust.
Identities = 246/660 (37%), Positives = 371/660 (56%), Gaps = 58/660 (8%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M + G+ P H P+L K GLD D + ++ +MY +
Sbjct: 107 MFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRC-- 164
Query: 162 LGGFGSANKVFDENPQRG-------------KGCKCEIDSVRKVFDLMPAR----DVVSW 204
G G A KVFD + KGC ++ V ++ M + ++VSW
Sbjct: 165 -GRMGDARKVFDRMSDKDVVTCSALLCAYARKGC---LEEVVRILSEMESSGIEANIVSW 220
Query: 205 NTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIR 264
N +++G ++G +EA+ M +++ PD T+SS+LP + + G IHGY I+
Sbjct: 221 NGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIK 280
Query: 265 HGFDGDVFIGSSLIDMYAK---------------------CNR----------VEHSLRA 293
G D + S++IDMY K CN V+ +L
Sbjct: 281 QGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEM 340
Query: 294 FYLLPYR----DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAH 349
F L + + +SW SIIAGC QNGK + + FR+M A VKP V+ S++PAC +
Sbjct: 341 FELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGN 400
Query: 350 LTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAI 409
+ AL G+ HG +R+ DN + S+L+DMYAKCG I +++ +F+ + T+++V W ++
Sbjct: 401 IAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSL 460
Query: 410 IMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFR 469
+ G +MHG A + +S+FE ++ ++P +++F ++L+AC GL DEGWKYF M +++
Sbjct: 461 MNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYG 520
Query: 470 IAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVV 529
I P LEHY+ + +LLGRAG+L+EAYD I M +P VW LL +CR +V+LAE
Sbjct: 521 IKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAA 580
Query: 530 DKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTF 589
+K+ ++PEN G YVL+SNIY+A W + +R M S GLKK P CSWI++ N+V+T
Sbjct: 581 EKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTL 640
Query: 590 LAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAF 649
LAGDKSHP D+I E ++ + ++M K G+ + LHDV+++ + +L HSE+LA+ F
Sbjct: 641 LAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVF 700
Query: 650 XXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
+VIKN+R+C DCH IKFIS GREI +RD +RFHHF +G CSCGD+W
Sbjct: 701 GLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 174/412 (42%), Gaps = 72/412 (17%)
Query: 192 VFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVD 251
V +P + S++++I + +F +++ + M L PDS L ++ + AE
Sbjct: 72 VLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSA 131
Query: 252 VVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDA--------- 302
G +IH + G D D F+ S+ MY +C R+ + + F + +D
Sbjct: 132 FKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCA 191
Query: 303 --------------------------ISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPM 336
+SWN I++G ++G + + F+++ P
Sbjct: 192 YARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPD 251
Query: 337 QVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFD 396
QV+ SSV+P+ LN+G+ +HG +I+ G +K + S+++DMY K G++ +F+
Sbjct: 252 QVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFN 311
Query: 397 KIETRD-----------------------------------MVAWTAIIMGCAMHGHALD 421
+ E + +V+WT+II GCA +G ++
Sbjct: 312 QFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIE 371
Query: 422 AVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVA 481
A+ LF +M GV+P +V ++L AC + + G + + + + +A+
Sbjct: 372 ALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHG-RSTHGFAVRVHLLDNVHVGSALI 430
Query: 482 DLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKIL 533
D+ + GR+ + + NM W++L+ H + + + ++
Sbjct: 431 DMYAKCGRINLS-QIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLM 481
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 96/211 (45%)
Query: 254 KGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCV 313
K + H ++ G D +I + LI Y+ N + +P S++S+I
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 314 QNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKF 373
+ F Q IG F +M + P ++ CA L+A +GKQ+H G D + F
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 374 IASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDG 433
+ S+ MY +CG + AR +FD++ +D+V +A++ A G + V + +M G
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 434 VRPCYVAFMAVLTACSHAGLVDEGWKYFNSM 464
+ V++ +L+ + +G E F +
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKI 243
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 473 bits (1217), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/608 (38%), Positives = 354/608 (58%), Gaps = 23/608 (3%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M+ +SP FP LLKA + G D D++ N L+ +Y K +
Sbjct: 110 MQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRR 169
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
LG SA VF+ P +P R +VSW +++ AQNG EAL
Sbjct: 170 LG---SARTVFEGLP-------------------LPERTIVSWTAIVSAYAQNGEPMEAL 207
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMY 281
++ +M +KPD L S+L F D+ +G IH ++ G + + + SL MY
Sbjct: 208 EIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMY 267
Query: 282 AKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFS 341
AKC +V + F + + I WN++I+G +NG + I F +M+ V+P +S +
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 342 SVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR 401
S I ACA + +L + ++ + R + D+ FI+S+L+DM+AKCG+++ AR +FD+ R
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 402 DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYF 461
D+V W+A+I+G +HG A +A+SL+ M GV P V F+ +L AC+H+G+V EGW +F
Sbjct: 388 DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF 447
Query: 462 NSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKS 521
N M D +I P +HYA V DLLGRAG L++AY+ I M +QP +VW LL+AC+ H+
Sbjct: 448 NRM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRH 506
Query: 522 VELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIE 581
VEL E ++ +DP N G YV +SN+Y+AA+ W A++R+ M+ KGL K CSW+E
Sbjct: 507 VELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVE 566
Query: 582 IGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTH 641
+ ++ F GDKSHP Y++I + + ++++ G+V + LHD++DE + L +H
Sbjct: 567 VRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSH 626
Query: 642 SERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNG 701
SER+AIA+ R+ KN+R CV+CH A K ISK+V REIVVRD +RFHHF +G
Sbjct: 627 SERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDG 686
Query: 702 SCSCGDYW 709
CSCGDYW
Sbjct: 687 VCSCGDYW 694
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 181/338 (53%), Gaps = 6/338 (1%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP 244
+I R+VFD +P + WN +I G ++N F++AL M M ++ PDSFT +L
Sbjct: 68 DITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLK 127
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAF--YLLPYRDA 302
+ + G +H R GFD DVF+ + LI +YAKC R+ + F LP R
Sbjct: 128 ACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTI 187
Query: 303 ISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGC 362
+SW +I++ QNG+ + + F QM K VKP V+ SV+ A L L G+ +H
Sbjct: 188 VSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHAS 247
Query: 363 IIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDA 422
++++G + + SL MYAKCG + A+ +FDK+++ +++ W A+I G A +G+A +A
Sbjct: 248 VVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREA 307
Query: 423 VSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEK-DFRIAPGLEHYAAVA 481
+ +F +M+ VRP ++ + ++AC+ G +++ + + + D+R + +A+
Sbjct: 308 IDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS--SALI 365
Query: 482 DLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAH 519
D+ + G +E A + + + VWS ++ H
Sbjct: 366 DMFAKCGSVEGA-RLVFDRTLDRDVVVWSAMIVGYGLH 402
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 141/282 (50%), Gaps = 10/282 (3%)
Query: 257 EIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNG 316
+IH + G F+ + LI + + + + F LP WN+II G +N
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 317 KFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIAS 376
F + + M A+V P +F ++ AC+ L+ L +G+ +H + RLGFD + F+ +
Sbjct: 99 HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158
Query: 377 SLVDMYAKCGNIKMARYIFD--KIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGV 434
L+ +YAKC + AR +F+ + R +V+WTAI+ A +G ++A+ +F +M + V
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDV 218
Query: 435 RPCYVAFMAVLTACSHAGLVDEGWKYFNSMEK-DFRIAPGLEHYAAVADLLGRAGRLEEA 493
+P +VA ++VL A + + +G S+ K I P L ++ + + G++ A
Sbjct: 219 KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL--LISLNTMYAKCGQVATA 276
Query: 494 YDFISNMGIQPTGSVWSTLLAACR----AHKSVELAEKVVDK 531
M P +W+ +++ A +++++ ++++K
Sbjct: 277 KILFDKMK-SPNLILWNAMISGYAKNGYAREAIDMFHEMINK 317
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 340 FSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIE 399
++S+I + H L KQ+H ++ LG + F+ + L+ + G+I AR +FD +
Sbjct: 24 YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP 80
Query: 400 TRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACS 449
+ W AII G + + H DA+ ++ M V P F +L ACS
Sbjct: 81 RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS 130
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 462 bits (1190), Expect = e-130, Method: Compositional matrix adjust.
Identities = 235/554 (42%), Positives = 341/554 (61%), Gaps = 31/554 (5%)
Query: 183 KCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSI 242
K +I R+ FD M RDVVSWNT+I G AQ+G EA R++ D+ D FT +++
Sbjct: 232 KKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEA----RQLFDESPVQDVFTWTAM 287
Query: 243 LPIFAEHVDVVKGMEIH----------------GYA-------IRHGFD----GDVFIGS 275
+ + ++ V + E+ GY + FD +V +
Sbjct: 288 VSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWN 347
Query: 276 SLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKP 335
++I YA+C ++ + F +P RD +SW ++IAG Q+G + + F QM + +
Sbjct: 348 TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRL 407
Query: 336 MQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIF 395
+ SFSS + CA + AL LGKQLHG +++ G++ F+ ++L+ MY KCG+I+ A +F
Sbjct: 408 NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLF 467
Query: 396 DKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVD 455
++ +D+V+W +I G + HG A+ FE M +G++P +AVL+ACSH GLVD
Sbjct: 468 KEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVD 527
Query: 456 EGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAA 515
+G +YF +M +D+ + P +HYA + DLLGRAG LE+A++ + NM +P ++W TLL A
Sbjct: 528 KGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGA 587
Query: 516 CRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTP 575
R H + ELAE DKI ++PEN G YVL+SN+Y+++ RW D KLR+ MR KG+KK P
Sbjct: 588 SRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVP 647
Query: 576 ACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKR 635
SWIEI NK HTF GD+ HP D+I L L +M+K GYV TS VLHDV++E K
Sbjct: 648 GYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKE 707
Query: 636 DLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRF 695
++R HSERLA+A+ RVIKN+RVC DCH AIK++++I GR I++RDN+RF
Sbjct: 708 RMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRF 767
Query: 696 HHFMNGSCSCGDYW 709
HHF +GSCSCGDYW
Sbjct: 768 HHFKDGSCSCGDYW 781
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 191/415 (46%), Gaps = 67/415 (16%)
Query: 163 GGFGSANKVFDENPQR----------GKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNA 212
G F A K+FDE P+R G + R++F++MP RDV SWNT+++G A
Sbjct: 109 GEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYA 168
Query: 213 QNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEI----HGYAI----- 263
QNG +D R + D + + + +++L + ++ + + + +A+
Sbjct: 169 QNG----CVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNC 224
Query: 264 --------------RHGFDG----DVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISW 305
R FD DV +++I YA+ +++ + + F P +D +W
Sbjct: 225 LLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTW 284
Query: 306 NSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIR 365
++++G +QN ++ F +M + +VS+++++ + + K+L
Sbjct: 285 TAMVSGYIQNRMVEEARELFDKMPERN----EVSWNAMLAGYVQGERMEMAKEL------ 334
Query: 366 LGFD----DNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALD 421
FD N ++++ YA+CG I A+ +FDK+ RD V+W A+I G + GH+ +
Sbjct: 335 --FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFE 392
Query: 422 AVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVA 481
A+ LF +M +G R +F + L+ C+ ++ G + + + G E V
Sbjct: 393 ALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL-----VKGGYETGCFVG 447
Query: 482 DLL----GRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKI 532
+ L + G +EEA D M + S W+T++A H E+A + + +
Sbjct: 448 NALLLMYCKCGSIEEANDLFKEMAGKDIVS-WNTMIAGYSRHGFGEVALRFFESM 501
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 162/383 (42%), Gaps = 66/383 (17%)
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHV 250
+VF MP VS+N +I+G +NG F ++ R++ D+ + D + + ++ + +
Sbjct: 85 RVFKRMPRWSSVSYNGMISGYLRNGEF----ELARKLFDEMPERDLVSWNVMIKGYVRNR 140
Query: 251 DVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIA 310
++ K E+ F ++P RD SWN++++
Sbjct: 141 NLGKAREL-----------------------------------FEIMPERDVCSWNTMLS 165
Query: 311 GCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDD 370
G QNG D F +M + VS+++++ A + K C++ ++
Sbjct: 166 GYAQNGCVDDARSVFDRMPEKN----DVSWNALLSAYVQNS-----KMEEACMLFKSREN 216
Query: 371 NKFIA-SSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM 429
++ + L+ + K I AR FD + RD+V+W II G A G +A LF+
Sbjct: 217 WALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFD-- 274
Query: 430 LEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLG--RA 487
E V+ + + A+++ +V+E + F+ M P + A L G +
Sbjct: 275 -ESPVQDVFT-WTAMVSGYIQNRMVEEARELFDKM-------PERNEVSWNAMLAGYVQG 325
Query: 488 GRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMS 547
R+E A + M + S W+T++ + A+ + DK+ DP + A +
Sbjct: 326 ERMEMAKELFDVMPCRNV-STWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAG- 383
Query: 548 NIYSAAKRWKDAAKLRIHMRSKG 570
YS + +A +L + M +G
Sbjct: 384 --YSQSGHSFEALRLFVQMEREG 404
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 125/265 (47%), Gaps = 18/265 (6%)
Query: 268 DGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQ 327
D D+ + I Y + R +LR F +P ++S+N +I+G ++NG+F+ F +
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 328 MLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGN 387
M + + VS++ +I ++ NLGK + + + + ++++ YA+ G
Sbjct: 121 MPERDL----VSWNVMIK--GYVRNRNLGKARE--LFEIMPERDVCSWNTMLSGYAQNGC 172
Query: 388 IKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTA 447
+ AR +FD++ ++ V+W A++ + +A LF K E+ V++ +L
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLF-KSRENWA---LVSWNCLLGG 228
Query: 448 CSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGS 507
+ E ++F+SM + + + ++G+++EA +Q +
Sbjct: 229 FVKKKKIVEARQFFDSMN-----VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFT 283
Query: 508 VWSTLLAACRAHKSVELAEKVVDKI 532
W+ +++ ++ VE A ++ DK+
Sbjct: 284 -WTAMVSGYIQNRMVEEARELFDKM 307
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 32/181 (17%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G + + NAL+ MYCK G AN +F E M +D
Sbjct: 439 GYETGCFVGNALLLMYCKC---GSIEEANDLFKE---------------------MAGKD 474
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
+VSWNT+IAG +++G AL M + LKPD T+ ++L H +V +
Sbjct: 475 IVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSA-CSHTGLVDKGRQYF 533
Query: 261 YAIRHGFDGDVFIGSS----LIDMYAKCNRVEHSLRAFYLLPYR-DAISWNSIIAGCVQN 315
Y + D V S ++D+ + +E + +P+ DA W +++ +
Sbjct: 534 YTMTQ--DYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVH 591
Query: 316 G 316
G
Sbjct: 592 G 592
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 462 bits (1188), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/571 (40%), Positives = 346/571 (60%), Gaps = 14/571 (2%)
Query: 150 NALMNMYCKVQNLGGFGSANKVFDENPQR----------GKGCKCEIDSVRKVFDLMPAR 199
N L+ MY K G A KVFDE P R G ++ RK+FD M +
Sbjct: 124 NRLLRMYAKC---GSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK 180
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGD-DKLKPDSFTLSSILPIFAEHVDVVKGMEI 258
D SW ++ G + EAL + M +P+ FT+S + A + +G EI
Sbjct: 181 DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEI 240
Query: 259 HGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKF 318
HG+ +R G D D + SSL+DMY KC ++ + F + +D +SW S+I ++ ++
Sbjct: 241 HGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRW 300
Query: 319 DQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSL 378
+G F +++ + +P + +F+ V+ ACA LT LGKQ+HG + R+GFD F +SSL
Sbjct: 301 REGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSL 360
Query: 379 VDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCY 438
VDMY KCGNI+ A+++ D D+V+WT++I GCA +G +A+ F+ +L+ G +P +
Sbjct: 361 VDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDH 420
Query: 439 VAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFIS 498
V F+ VL+AC+HAGLV++G ++F S+ + R++ +HY + DLL R+GR E+ IS
Sbjct: 421 VTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVIS 480
Query: 499 NMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKD 558
M ++P+ +W+++L C + +++LAE+ ++ ++PEN YV M+NIY+AA +W++
Sbjct: 481 EMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEE 540
Query: 559 AAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGY 618
K+R M+ G+ K P SW EI K H F+A D SHP Y++I E L L ++M++EGY
Sbjct: 541 EGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGY 600
Query: 619 VLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKF 678
V TS VLHDV+DE K + L HSE+LA+AF +V KN+R CVDCH AIKF
Sbjct: 601 VPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKF 660
Query: 679 ISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
IS I R+I VRD++RFH F NG CSCGDYW
Sbjct: 661 ISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 167/373 (44%), Gaps = 48/373 (12%)
Query: 216 MFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGS 275
+ REA+ + +G K KP + T +++ + ++ + +G ++H + GF + I +
Sbjct: 69 LLREAVQL---LGRAK-KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWN 124
Query: 276 SLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLK----- 330
L+ MYAKC + + + F +P RD SWN ++ G + G ++ F +M +
Sbjct: 125 RLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYS 184
Query: 331 ---------------------------AKVKPMQVSFSSVIPACAHLTALNLGKQLHGCI 363
+P + S + A A + + GK++HG I
Sbjct: 185 WTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHI 244
Query: 364 IRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAV 423
+R G D ++ + SSL+DMY KCG I AR IFDKI +D+V+WT++I +
Sbjct: 245 VRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGF 304
Query: 424 SLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHY----AA 479
SLF +++ RP F VL AC+ + G + M + G + Y ++
Sbjct: 305 SLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTR-----VGFDPYSFASSS 359
Query: 480 VADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPEN 539
+ D+ + G +E A + +P W++L+ C + + A K D LL+
Sbjct: 360 LVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQPDEALKYFD--LLLKSGT 416
Query: 540 MGAYVLMSNIYSA 552
+V N+ SA
Sbjct: 417 KPDHVTFVNVLSA 429
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 125/286 (43%), Gaps = 21/286 (7%)
Query: 327 QMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCG 386
Q+L KP ++ ++I C+ AL GK++H I GF I + L+ MYAKCG
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134
Query: 387 NIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLT 446
++ AR +FD++ RD+ +W ++ G A G +A LF++M E ++ A++T
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDS----YSWTAMVT 190
Query: 447 ACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAG---RLEEAYDFISNMGIQ 503
+E ++ M++ P + + R +E + I G+
Sbjct: 191 GYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLD 250
Query: 504 PTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLR 563
+WS+L+ ++ A + DKI+ D + ++ M + Y + RW++ L
Sbjct: 251 SDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKD---VVSWTSMIDRYFKSSRWREGFSLF 307
Query: 564 IHMRSKGLKKTP--------ACSWI---EIGNKVHTFLAGDKSHPY 598
+ + AC+ + E+G +VH ++ PY
Sbjct: 308 SELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPY 353
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 458 bits (1178), Expect = e-129, Method: Compositional matrix adjust.
Identities = 218/529 (41%), Positives = 339/529 (64%), Gaps = 2/529 (0%)
Query: 183 KC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
KC ++DS + VF M R VVS+ ++IAG A+ G+ EA+ + EM ++ + PD +T+++
Sbjct: 343 KCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTA 402
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
+L A + + +G +H + + D+F+ ++L+DMYAKC ++ + F + +D
Sbjct: 403 VLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKD 462
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAK-VKPMQVSFSSVIPACAHLTALNLGKQLH 360
ISWN+II G +N ++ + F +L+ K P + + + V+PACA L+A + G+++H
Sbjct: 463 IISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIH 522
Query: 361 GCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHAL 420
G I+R G+ ++ +A+SLVDMYAKCG + +A +FD I ++D+V+WT +I G MHG
Sbjct: 523 GYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGK 582
Query: 421 DAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAV 480
+A++LF +M + G+ ++F+++L ACSH+GLVDEGW++FN M + +I P +EHYA +
Sbjct: 583 EAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACI 642
Query: 481 ADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENM 540
D+L R G L +AY FI NM I P ++W LL CR H V+LAEKV +K+ ++PEN
Sbjct: 643 VDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENT 702
Query: 541 GAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYD 600
G YVLM+NIY+ A++W+ +LR + +GL+K P CSWIEI +V+ F+AGD S+P +
Sbjct: 703 GYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETE 762
Query: 601 KINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXX 660
I L + +M +EGY T L D ++ K + L HSE+LA+A
Sbjct: 763 NIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKII 822
Query: 661 RVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
RV KN+RVC DCH KF+SK+ REIV+RD++RFH F +G CSC +W
Sbjct: 823 RVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 194/370 (52%), Gaps = 16/370 (4%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP 244
++ +VFD + + WN ++ A++G F ++ + ++M ++ DS+T S +
Sbjct: 144 DLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSK 203
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS 304
F+ V G ++HG+ ++ GF +G+SL+ Y K RV+ + + F + RD IS
Sbjct: 204 SFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVIS 263
Query: 305 WNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCII 364
WNSII G V NG ++G+ F QML + ++ + SV CA ++LG+ +H +
Sbjct: 264 WNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGV 323
Query: 365 RLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVS 424
+ F ++L+DMY+KCG++ A+ +F ++ R +V++T++I G A G A +AV
Sbjct: 324 KACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVK 383
Query: 425 LFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG-----WKYFNSMEKDFRIAPGLEHYAA 479
LFE+M E+G+ P AVL C+ L+DEG W N + D ++ A
Sbjct: 384 LFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN------A 437
Query: 480 VADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAA----CRAHKSVELAEKVVDKILLV 535
+ D+ + G ++EA S M ++ S W+T++ C A++++ L ++++
Sbjct: 438 LMDMYAKCGSMQEAELVFSEMRVKDIIS-WNTIIGGYSKNCYANEALSLFNLLLEEKRFS 496
Query: 536 DPENMGAYVL 545
E A VL
Sbjct: 497 PDERTVACVL 506
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 157/337 (46%), Gaps = 35/337 (10%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M GISP + ++L L FD++ +NALM+MY K
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKC-- 445
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
G A VF E M +D++SWNT+I G ++N EAL
Sbjct: 446 -GSMQEAELVFSE---------------------MRVKDIISWNTIIGGYSKNCYANEAL 483
Query: 222 DMVREMGDDK-LKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDM 280
+ + ++K PD T++ +LP A KG EIHGY +R+G+ D + +SL+DM
Sbjct: 484 SLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDM 543
Query: 281 YAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSF 340
YAKC + + F + +D +SW +IAG +G + I F QM +A ++ ++SF
Sbjct: 544 YAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISF 603
Query: 341 SSVIPACAHLTALNLGKQL-----HGCIIRLGFDDNKFIASSLVDMYAKCGN-IKMARYI 394
S++ AC+H ++ G + H C I + + +VDM A+ G+ IK R+I
Sbjct: 604 VSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEH----YACIVDMLARTGDLIKAYRFI 659
Query: 395 FDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLE 431
+ D W A++ GC +H A + EK+ E
Sbjct: 660 ENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFE 696
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 207/468 (44%), Gaps = 61/468 (13%)
Query: 188 SVRKVFDLMPA-----RDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSI 242
S+R V D + + R V NT + ++G A+ ++ G K D TL S+
Sbjct: 43 SLRTVSDCVDSITTFDRSVTDANTQLRRFCESGNLENAVKLLCVSG--KWDIDPRTLCSV 100
Query: 243 LPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDA 302
L + A+ + G E+ + +GF D +GS L MY C ++ + R F + A
Sbjct: 101 LQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKA 160
Query: 303 ISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGC 362
+ WN ++ ++G F IG F++M+ + V+ +FS V + + L +++ G+QLHG
Sbjct: 161 LFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGF 220
Query: 363 IIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDA 422
I++ GF + + +SLV Y K + AR +FD++ RD+++W +II G +G A
Sbjct: 221 ILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 280
Query: 423 VSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGW-------KYFNSMEKDFRIAPGLE 475
+S+F +ML G+ ++V C+ + L+ G K S E F L+
Sbjct: 281 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF-CNTLLD 339
Query: 476 HYAAVADL---------------------------LGRAGRLEEAYDFISNMGIQPTGSV 508
Y+ DL G AG + ++ + GI P
Sbjct: 340 MYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 399
Query: 509 WSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSN----IYSAAKRWKDAAKLRI 564
+ +L C ++ ++ ++V + I ++G + +SN +Y+ ++A +
Sbjct: 400 VTAVLNCCARYRLLDEGKRVHEWI---KENDLGFDIFVSNALMDMYAKCGSMQEAELVFS 456
Query: 565 HMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQ 612
MR K + SW +T + G + Y ++ N+LLE+
Sbjct: 457 EMRVKDI-----ISW-------NTIIGGYSKNCYANEALSLFNLLLEE 492
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 456 bits (1172), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/528 (42%), Positives = 334/528 (63%), Gaps = 2/528 (0%)
Query: 183 KC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
KC +++ R++FD M R+VVSWN++I QN +EA+ + ++M D+ +KP ++
Sbjct: 283 KCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG 342
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
L A+ D+ +G IH ++ G D +V + +SLI MY KC V+ + F L R
Sbjct: 343 ALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT 402
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
+SWN++I G QNG+ + +F QM VKP ++ SVI A A L+ + K +HG
Sbjct: 403 LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHG 462
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALD 421
++R D N F+ ++LVDMYAKCG I +AR IFD + R + W A+I G HG
Sbjct: 463 VVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKA 522
Query: 422 AVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVA 481
A+ LFE+M + ++P V F++V++ACSH+GLV+ G K F M++++ I ++HY A+
Sbjct: 523 ALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMV 582
Query: 482 DLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMG 541
DLLGRAGRL EA+DFI M ++P +V+ +L AC+ HK+V AEK +++ ++P++ G
Sbjct: 583 DLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGG 642
Query: 542 AYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDK 601
+VL++NIY AA W+ ++R+ M +GL+KTP CS +EI N+VH+F +G +HP K
Sbjct: 643 YHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKK 702
Query: 602 INEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXXR 661
I L L+ +++ GYV DT+ VL V+++ K LL THSE+LAI+F
Sbjct: 703 IYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIH 761
Query: 662 VIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
V KN+RVC DCH A K+IS + GREIVVRD RFHHF NG+CSCGDYW
Sbjct: 762 VRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 125/346 (36%), Positives = 185/346 (53%), Gaps = 24/346 (6%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
MR + P + F LLK G DL+ L NMY K
Sbjct: 126 MRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAK--- 182
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
C+ +++ RKVFD MP RD+VSWNT++AG +QNGM R AL
Sbjct: 183 --------------------CR-QVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMAL 221
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMY 281
+MV+ M ++ LKP T+ S+LP + + G EIHGYA+R GFD V I ++L+DMY
Sbjct: 222 EMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMY 281
Query: 282 AKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFS 341
AKC +E + + F + R+ +SWNS+I VQN + + F++ML VKP VS
Sbjct: 282 AKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVM 341
Query: 342 SVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR 401
+ ACA L L G+ +H + LG D N + +SL+ MY KC + A +F K+++R
Sbjct: 342 GALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR 401
Query: 402 DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTA 447
+V+W A+I+G A +G +DA++ F +M V+P +++V+TA
Sbjct: 402 TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA 447
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 164/272 (60%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
+D +VF+ + ++ V ++T++ G A+ +AL M D ++P + + +L +
Sbjct: 85 VDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKV 144
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISW 305
+ ++ G EIHG ++ GF D+F + L +MYAKC +V + + F +P RD +SW
Sbjct: 145 CGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSW 204
Query: 306 NSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIR 365
N+I+AG QNG + + M + +KP ++ SV+PA + L +++GK++HG +R
Sbjct: 205 NTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMR 264
Query: 366 LGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSL 425
GFD I+++LVDMYAKCG+++ AR +FD + R++V+W ++I + + +A+ +
Sbjct: 265 SGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLI 324
Query: 426 FEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG 457
F+KML++GV+P V+ M L AC+ G ++ G
Sbjct: 325 FQKMLDEGVKPTDVSVMGALHACADLGDLERG 356
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 142/278 (51%), Gaps = 4/278 (1%)
Query: 257 EIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNG 316
+I ++G + F + L+ ++ + V+ + R F + + + +++++ G +
Sbjct: 55 QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVS 114
Query: 317 KFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIAS 376
D+ + FF +M V+P+ +F+ ++ C L +GK++HG +++ GF + F +
Sbjct: 115 DLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMT 174
Query: 377 SLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRP 436
L +MYAKC + AR +FD++ RD+V+W I+ G + +G A A+ + + M E+ ++P
Sbjct: 175 GLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKP 234
Query: 437 CYVAFMAVLTACSHAGLVDEGWKYFN-SMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYD 495
++ ++VL A S L+ G + +M F + A+ D+ + G LE A
Sbjct: 235 SFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS--TALVDMYAKCGSLETARQ 292
Query: 496 FISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKIL 533
M ++ W++++ A +++ + A + K+L
Sbjct: 293 LFDGM-LERNVVSWNSMIDAYVQNENPKEAMLIFQKML 329
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 453 bits (1165), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/649 (37%), Positives = 370/649 (57%), Gaps = 48/649 (7%)
Query: 106 GISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGF 165
GI PT+ ++L + GL ++ +N+L+NMY K G
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKC---GDP 197
Query: 166 GSANKVFDENPQRGKGC----------KCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNG 215
A VFD R ++D F+ M RD+V+WN++I+G Q G
Sbjct: 198 MMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRG 257
Query: 216 MFREALDMVREM-GDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIG 274
ALD+ +M D L PD FTL+S+L A + G +IH + + GFD +
Sbjct: 258 YDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVL 317
Query: 275 SSLIDMYAKCNRVEHSLR---------------------------------AFYLLPYRD 301
++LI MY++C VE + R F L RD
Sbjct: 318 NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRD 377
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
++W ++I G Q+G + + I FR M+ +P + ++++ + L +L+ GKQ+HG
Sbjct: 378 VVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHG 437
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIE-TRDMVAWTAIIMGCAMHGHAL 420
++ G + ++++L+ MYAK GNI A FD I RD V+WT++I+ A HGHA
Sbjct: 438 SAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Query: 421 DAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAV 480
+A+ LFE ML +G+RP ++ ++ V +AC+HAGLV++G +YF+ M+ +I P L HYA +
Sbjct: 498 EALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACM 557
Query: 481 ADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENM 540
DL GRAG L+EA +FI M I+P W +LL+ACR HK+++L + +++LL++PEN
Sbjct: 558 VDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENS 617
Query: 541 GAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYD 600
GAY ++N+YSA +W++AAK+R M+ +KK SWIE+ +KVH F D +HP +
Sbjct: 618 GAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKN 677
Query: 601 KINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXX 660
+I + + ++++K GYV DT+ VLHD+++E K +LR HSE+LAIAF
Sbjct: 678 EIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTL 737
Query: 661 RVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
R++KN+RVC DCHTAIKFISK+VGREI+VRD +RFHHF +G CSC DYW
Sbjct: 738 RIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 219/469 (46%), Gaps = 79/469 (16%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQR----------GKGCKCEIDSVR 190
GL F +Y N LMN+Y K G A K+FDE P R + ++DS
Sbjct: 44 GLMFSVYLMNNLMNVYSKT---GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTC 100
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHV 250
+ FD +P RD VSW T+I G G + +A+ ++ +M + ++P FTL+++L A
Sbjct: 101 EFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATR 160
Query: 251 DVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKC-------------------------- 284
+ G ++H + ++ G G+V + +SL++MYAKC
Sbjct: 161 CMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIA 220
Query: 285 -----NRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLK-AKVKPMQV 338
+++ ++ F + RD ++WNS+I+G Q G + + F +ML+ + + P +
Sbjct: 221 LHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRF 280
Query: 339 SFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARY----- 393
+ +SV+ ACA+L L +GKQ+H I+ GFD + + ++L+ MY++CG ++ AR
Sbjct: 281 TLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQR 340
Query: 394 ----------------------------IFDKIETRDMVAWTAIIMGCAMHGHALDAVSL 425
IF ++ RD+VAWTA+I+G HG +A++L
Sbjct: 341 GTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINL 400
Query: 426 FEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLG 485
F M+ G RP A+L+ S + G + S K I + A+ +
Sbjct: 401 FRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYS-VSVSNALITMYA 459
Query: 486 RAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILL 534
+AG + A + + W++++ A H E A ++ + +L+
Sbjct: 460 KAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLM 508
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 449 bits (1156), Expect = e-126, Method: Compositional matrix adjust.
Identities = 233/596 (39%), Positives = 351/596 (58%), Gaps = 26/596 (4%)
Query: 116 SLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGFGSANKVFDEN 175
SLL A T GL+ +L+ +N L+++Y + FG
Sbjct: 252 SLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE------FG--------- 296
Query: 176 PQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPD 235
R + C+ KVFD M RD++SWN++I N A+ + +EM +++PD
Sbjct: 297 --RLRDCQ-------KVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPD 347
Query: 236 SFTLSSILPIFAEHVDVVKGMEIHGYAIRHG-FDGDVFIGSSLIDMYAKCNRVEHSLRAF 294
TL S+ I ++ D+ + G+ +R G F D+ IG++++ MYAK V+ + F
Sbjct: 348 CLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVF 407
Query: 295 YLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLK-AKVKPMQVSFSSVIPACAHLTAL 353
LP D ISWN+II+G QNG + I + M + ++ Q ++ SV+PAC+ AL
Sbjct: 408 NWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGAL 467
Query: 354 NLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGC 413
G +LHG +++ G + F+ +SL DMY KCG ++ A +F +I + V W +I
Sbjct: 468 RQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACH 527
Query: 414 AMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPG 473
HGH AV LF++ML++GV+P ++ F+ +L+ACSH+GLVDEG F M+ D+ I P
Sbjct: 528 GFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPS 587
Query: 474 LEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKIL 533
L+HY + D+ GRAG+LE A FI +M +QP S+W LL+ACR H +V+L + + +
Sbjct: 588 LKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLF 647
Query: 534 LVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGD 593
V+PE++G +VL+SN+Y++A +W+ ++R KGL+KTP S +E+ NKV F G+
Sbjct: 648 EVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGN 707
Query: 594 KSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXX 653
++HP Y+++ L L +++ GYV D VL DV+D+ K +L +HSERLAIAF
Sbjct: 708 QTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIA 767
Query: 654 XXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
R+ KN+RVC DCH+ KFISKI REI+VRD++RFHHF NG CSCGDYW
Sbjct: 768 TPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/456 (29%), Positives = 232/456 (50%), Gaps = 49/456 (10%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M + G++P FPS+LKA G +D+Y A +L+++Y + +
Sbjct: 144 MLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKA 200
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
+G + R +FD MP RD+ SWN +I+G Q+G +EAL
Sbjct: 201 VG------------------------NARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 236
Query: 222 DM---VREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLI 278
+ +R M DS T+ S+L E D +G+ IH Y+I+HG + ++F+ + LI
Sbjct: 237 TLSNGLRAM-------DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLI 289
Query: 279 DMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQV 338
D+YA+ R+ + F + RD ISWNSII N + + I F++M ++++P +
Sbjct: 290 DLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCL 349
Query: 339 SFSSVIPACAHLTALNLGKQLHGCIIRLG-FDDNKFIASSLVDMYAKCGNIKMARYIFDK 397
+ S+ + L + + + G +R G F ++ I +++V MYAK G + AR +F+
Sbjct: 350 TLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNW 409
Query: 398 IETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDG-VRPCYVAFMAVLTACSHAGLVDE 456
+ D+++W II G A +G A +A+ ++ M E+G + +++VL ACS AG + +
Sbjct: 410 LPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 469
Query: 457 GWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSV-WSTLLAA 515
G K + K+ + + ++AD+ G+ GRLE+A I SV W+TL+A
Sbjct: 470 GMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQ--IPRVNSVPWNTLIAC 526
Query: 516 CRAH----KSVELAEKVVDKILLVDPENMGAYVLMS 547
H K+V L ++++D+ V P+++ L+S
Sbjct: 527 HGFHGHGEKAVMLFKEMLDE--GVKPDHITFVTLLS 560
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 139/265 (52%), Gaps = 10/265 (3%)
Query: 190 RKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVRE-MGDDKLKPDSFTLSSILPIFAE 248
R FD + RDV +WN +I+G + G E + M L PD T S+L
Sbjct: 106 RHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR- 164
Query: 249 HVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSI 308
V+ G +IH A++ GF DV++ +SLI +Y++ V ++ F +P RD SWN++
Sbjct: 165 --TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAM 222
Query: 309 IAGCVQNGKFDQGIGFFRQMLKAKVKPM-QVSFSSVIPACAHLTALNLGKQLHGCIIRLG 367
I+G Q+G + + L ++ M V+ S++ AC N G +H I+ G
Sbjct: 223 ISGYCQSGNAKEAL-----TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG 277
Query: 368 FDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFE 427
+ F+++ L+D+YA+ G ++ + +FD++ RD+++W +II ++ L A+SLF+
Sbjct: 278 LESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQ 337
Query: 428 KMLEDGVRPCYVAFMAVLTACSHAG 452
+M ++P + +++ + S G
Sbjct: 338 EMRLSRIQPDCLTLISLASILSQLG 362
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 136/271 (50%), Gaps = 26/271 (9%)
Query: 270 DVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQ-M 328
+V I + L+++Y V + F + RD +WN +I+G + G + I F M
Sbjct: 85 NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM 144
Query: 329 LKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNI 388
L + + P +F SV+ AC T ++ G ++H ++ GF + ++A+SL+ +Y++ +
Sbjct: 145 LSSGLTPDYRTFPSVLKACR--TVID-GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAV 201
Query: 389 KMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPC-YVAFMAVLTA 447
AR +FD++ RDM +W A+I G G+A +A++ L +G+R V +++L+A
Sbjct: 202 GNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT-----LSNGLRAMDSVTVVSLLSA 256
Query: 448 CSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVA----DLLGRAGRLEEAYDFISNMGIQ 503
C+ AG + G + + I GLE V+ DL GRL + M ++
Sbjct: 257 CTEAGDFNRGVTIHS-----YSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR 311
Query: 504 PTGSVWSTLLAACRAHKSVELAEKVVDKILL 534
S W++++ K+ EL E+ + I L
Sbjct: 312 DLIS-WNSII------KAYELNEQPLRAISL 335
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 349 HLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTA 408
+ T L K LH ++ N I++ LV++Y GN+ +AR+ FD I+ RD+ AW
Sbjct: 63 YCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNL 122
Query: 409 IIMGCAMHGHALDAVSLFEK-MLEDGVRPCYVAFMAVLTAC 448
+I G G++ + + F ML G+ P Y F +VL AC
Sbjct: 123 MISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC 163
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 449 bits (1155), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/594 (39%), Positives = 356/594 (59%), Gaps = 25/594 (4%)
Query: 141 GLDFDLYTANALM------NMYCKVQNLGGFGSANKVFDENPQRGKG-----CKC-EIDS 188
G++ D +T ++++ M + L + N DEN G C C ++ S
Sbjct: 297 GVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLS 356
Query: 189 VRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDK-LKPDSFTLSSILPIFA 247
R+VFD M R + WN +IAG +QN +EAL + M + L +S T++ ++P
Sbjct: 357 GRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACV 416
Query: 248 EHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNS 307
+ IHG+ ++ G D D F+ ++L+DMY++ +++ ++R F + RD ++WN+
Sbjct: 417 RSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNT 476
Query: 308 IIAGCVQNGKFDQGIGFFRQM--LKAKV---------KPMQVSFSSVIPACAHLTALNLG 356
+I G V + + + +M L+ KV KP ++ +++P+CA L+AL G
Sbjct: 477 MITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG 536
Query: 357 KQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMH 416
K++H I+ + + S+LVDMYAKCG ++M+R +FD+I ++++ W IIM MH
Sbjct: 537 KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMH 596
Query: 417 GHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEH 476
G+ +A+ L M+ GV+P V F++V ACSH+G+VDEG + F M+ D+ + P +H
Sbjct: 597 GNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDH 656
Query: 477 YAAVADLLGRAGRLEEAYDFISNMGIQ-PTGSVWSTLLAACRAHKSVELAEKVVDKILLV 535
YA V DLLGRAGR++EAY ++ M WS+LL A R H ++E+ E ++ +
Sbjct: 657 YACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQL 716
Query: 536 DPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKS 595
+P YVL++NIYS+A W A ++R +M+ +G++K P CSWIE G++VH F+AGD S
Sbjct: 717 EPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSS 776
Query: 596 HPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXX 655
HP +K++ L L E+M KEGYV DTS VLH+V+++ K LL HSE+LAIAF
Sbjct: 777 HPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTS 836
Query: 656 XXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
RV KN+RVC DCH A KFISKIV REI++RD RFH F NG+CSCGDYW
Sbjct: 837 PGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 217/443 (48%), Gaps = 53/443 (11%)
Query: 198 ARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVK-GM 256
RD+V+WNTV++ QN EAL+ +REM + ++PD FT+SS+LP H+++++ G
Sbjct: 264 GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPA-CSHLEMLRTGK 322
Query: 257 EIHGYAIRHG-FDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQN 315
E+H YA+++G D + F+GS+L+DMY C +V R F + R WN++IAG QN
Sbjct: 323 ELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQN 382
Query: 316 GKFDQGIGFFRQMLK-AKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFI 374
+ + F M + A + + + V+PAC A + + +HG +++ G D ++F+
Sbjct: 383 EHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFV 442
Query: 375 ASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM--LED 432
++L+DMY++ G I +A IF K+E RD+V W +I G H DA+ L KM LE
Sbjct: 443 QNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLER 502
Query: 433 GV---------RPCYVAFMAVLTACSHAGLVDEG-----WKYFNSMEKDFRIAPGL-EHY 477
V +P + M +L +C+ + +G + N++ D + L + Y
Sbjct: 503 KVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMY 562
Query: 478 AAVADL------------------------LGRAGRLEEAYDFISNM---GIQPTGSVWS 510
A L G G +EA D + M G++P +
Sbjct: 563 AKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFI 622
Query: 511 TLLAACRAHKSVELAEK---VVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMR 567
++ AAC V+ + V+ V+P + Y + ++ A R K+A +L ++M
Sbjct: 623 SVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS-DHYACVVDLLGRAGRIKEAYQL-MNMM 680
Query: 568 SKGLKKTPACSWIEIGNKVHTFL 590
+ K A S + +++H L
Sbjct: 681 PRDFNKAGAWSSLLGASRIHNNL 703
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 176/360 (48%), Gaps = 37/360 (10%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYT-ANALMNMYCKVQ 160
M LGI P + FP+LLKA G D T AN L+N+Y K
Sbjct: 88 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKC- 146
Query: 161 NLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREA 220
G FG+ V KVFD + R+ VSWN++I+ + A
Sbjct: 147 --GDFGA---------------------VYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 221 LDMVREMGDDKLKPDSFTLSSI------LPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIG 274
L+ R M D+ ++P SFTL S+ LP+ ++ G ++H Y +R G + + FI
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPE---GLMMGKQVHAYGLRKG-ELNSFII 239
Query: 275 SSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVK 334
++L+ MY K ++ S RD ++WN++++ QN + + + + R+M+ V+
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 335 PMQVSFSSVIPACAHLTALNLGKQLHGCIIRLG-FDDNKFIASSLVDMYAKCGNIKMARY 393
P + + SSV+PAC+HL L GK+LH ++ G D+N F+ S+LVDMY C + R
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 394 IFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLED-GVRPCYVAFMAVLTACSHAG 452
+FD + R + W A+I G + + H +A+ LF M E G+ V+ AC +G
Sbjct: 360 VFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 133/258 (51%), Gaps = 5/258 (1%)
Query: 204 WNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAI 263
W ++ ++ + REA+ +M +KPD++ ++L A+ D+ G +IH +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 264 RHGFDGD-VFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGI 322
+ G+ D V + ++L+++Y KC + F + R+ +SWNS+I+ K++ +
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 323 GFFRQMLKAKVKPMQVSFSSVIPACAHLT---ALNLGKQLHGCIIRLGFDDNKFIASSLV 379
FR ML V+P + SV+ AC++L L +GKQ+H +R G + N FI ++LV
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLV 243
Query: 380 DMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYV 439
MY K G + ++ + RD+V W ++ + L+A+ +M+ +GV P
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 440 AFMAVLTACSHAGLVDEG 457
+VL ACSH ++ G
Sbjct: 304 TISSVLPACSHLEMLRTG 321
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 446 bits (1148), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/609 (39%), Positives = 340/609 (55%), Gaps = 25/609 (4%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
MR G P+ F +LKA G D N +++ Y K
Sbjct: 241 MRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSK--- 297
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
++V + R +FD MP D VS+N VI+ +Q + +L
Sbjct: 298 ------HDRVLE---------------TRMLFDEMPELDFVSYNVVISSYSQADQYEASL 336
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMY 281
REM +F +++L I A + G ++H A+ D + +G+SL+DMY
Sbjct: 337 HFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMY 396
Query: 282 AKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFS 341
AKC E + F LP R +SW ++I+G VQ G G+ F +M + ++ Q +F+
Sbjct: 397 AKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFA 456
Query: 342 SVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR 401
+V+ A A +L LGKQLH IIR G +N F S LVDMYAKCG+IK A +F+++ R
Sbjct: 457 TVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR 516
Query: 402 DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYF 461
+ V+W A+I A +G A+ F KM+E G++P V+ + VLTACSH G V++G +YF
Sbjct: 517 NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYF 576
Query: 462 NSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKS 521
+M + I P +HYA + DLLGR GR EA + M +P +WS++L ACR HK+
Sbjct: 577 QAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKN 636
Query: 522 VELAEKVVDKILLVDP-ENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWI 580
LAE+ +K+ ++ + AYV MSNIY+AA W+ ++ MR +G+KK PA SW+
Sbjct: 637 QSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWV 696
Query: 581 EIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRT 640
E+ +K+H F + D++HP D+I +N L ++E+EGY DTS V+ DVD++ K + L+
Sbjct: 697 EVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKY 756
Query: 641 HSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMN 700
HSERLA+AF V+KN+R C DCH AIK ISKIV REI VRD SRFHHF
Sbjct: 757 HSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSE 816
Query: 701 GSCSCGDYW 709
G CSCGDYW
Sbjct: 817 GVCSCGDYW 825
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 177/383 (46%), Gaps = 40/383 (10%)
Query: 142 LDFD----LYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMP 197
L FD L +N L+ YC+V+ L D +F+ +P
Sbjct: 176 LGFDTNPFLTVSNVLLKSYCEVRRL------------------------DLACVLFEEIP 211
Query: 198 ARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGME 257
+D V++NT+I G ++G++ E++ + +M +P FT S +L D G +
Sbjct: 212 EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQ 271
Query: 258 IHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGK 317
+H ++ GF D +G+ ++D Y+K +RV + F +P D +S+N +I+ Q +
Sbjct: 272 LHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQ 331
Query: 318 FDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASS 377
++ + FFR+M F++++ A+L++L +G+QLH + D + +S
Sbjct: 332 YEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNS 391
Query: 378 LVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPC 437
LVDMYAKC + A IF + R V+WTA+I G G + LF KM +R
Sbjct: 392 LVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRAD 451
Query: 438 YVAFMAVLTA-CSHAGLVDEGWKYFNSMEKDFRIAPG-LEHY---AAVADLLGRAGRLEE 492
F VL A S A L+ F I G LE+ + + D+ + G +++
Sbjct: 452 QSTFATVLKASASFASLL------LGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKD 505
Query: 493 AYDFISNMGIQPTGSVWSTLLAA 515
A M + S W+ L++A
Sbjct: 506 AVQVFEEMPDRNAVS-WNALISA 527
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 148/303 (48%), Gaps = 17/303 (5%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQR----------GKGCKCEIDSVR 190
G D D +N ++ + G +A KV+DE P + G ++ S R
Sbjct: 43 GFDTDTCRSNFIVE---DLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSAR 99
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREM--GDDKLKPDSFTLSSILPIFAE 248
+FD MP R VV+W ++ A+N F EA + R+M PD T +++LP +
Sbjct: 100 DLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCND 159
Query: 249 HVDVVKGMEIHGYAIRHGFDGDVFIGSS--LIDMYAKCNRVEHSLRAFYLLPYRDAISWN 306
V ++H +A++ GFD + F+ S L+ Y + R++ + F +P +D++++N
Sbjct: 160 AVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFN 219
Query: 307 SIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRL 366
++I G ++G + + I F +M ++ +P +FS V+ A L LG+QLH +
Sbjct: 220 TLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTT 279
Query: 367 GFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLF 426
GF + + + ++D Y+K + R +FD++ D V++ +I + ++ F
Sbjct: 280 GFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFF 339
Query: 427 EKM 429
+M
Sbjct: 340 REM 342
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 445 bits (1144), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/603 (38%), Positives = 343/603 (56%), Gaps = 25/603 (4%)
Query: 100 NAMRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKV 159
N + I R F+ +LLK T D+ N L+NMY K
Sbjct: 49 NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC 108
Query: 160 QNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFRE 219
+L + RKVF+ MP RD V+W T+I+G +Q+ +
Sbjct: 109 GSL------------------------EEARKVFEKMPQRDFVTWTTLISGYSQHDRPCD 144
Query: 220 ALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLID 279
AL +M P+ FTLSS++ A G ++HG+ ++ GFD +V +GS+L+D
Sbjct: 145 ALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLD 204
Query: 280 MYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVS 339
+Y + ++ + F L R+ +SWN++IAG + ++ + F+ ML+ +P S
Sbjct: 205 LYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFS 264
Query: 340 FSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIE 399
++S+ AC+ L GK +H +I+ G F ++L+DMYAK G+I AR IFD++
Sbjct: 265 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 324
Query: 400 TRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWK 459
RD+V+W +++ A HG +AV FE+M G+RP ++F++VLTACSH+GL+DEGW
Sbjct: 325 KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWH 384
Query: 460 YFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAH 519
Y+ M+KD I P HY V DLLGRAG L A FI M I+PT ++W LL ACR H
Sbjct: 385 YYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 443
Query: 520 KSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSW 579
K+ EL + + +DP++ G +V++ NIY++ RW DAA++R M+ G+KK PACSW
Sbjct: 444 KNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSW 503
Query: 580 IEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLR 639
+EI N +H F+A D+ HP ++I +L ++++ GYV DTS V+ VD + + L+
Sbjct: 504 VEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQ 563
Query: 640 THSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFM 699
HSE++A+AF + KNIRVC DCHTAIK SK+VGREI+VRD +RFHHF
Sbjct: 564 YHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFK 623
Query: 700 NGS 702
+ S
Sbjct: 624 DAS 626
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 444 bits (1142), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/524 (40%), Positives = 333/524 (63%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
++ R+VFD M R +VSWNT+I +N M EALD+ EM ++ K FT+SS+L
Sbjct: 112 VELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSA 171
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISW 305
+ D ++ ++H +++ D ++++G++L+D+YAKC ++ +++ F + + +++W
Sbjct: 172 CGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTW 231
Query: 306 NSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIR 365
+S++AG VQN +++ + +R+ + ++ Q + SSVI AC++L AL GKQ+H I +
Sbjct: 232 SSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICK 291
Query: 366 LGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSL 425
GF N F+ASS VDMYAKCG+++ + IF +++ +++ W II G A H + + L
Sbjct: 292 SGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMIL 351
Query: 426 FEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLG 485
FEKM +DG+ P V F ++L+ C H GLV+EG ++F M + ++P + HY+ + D+LG
Sbjct: 352 FEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILG 411
Query: 486 RAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVL 545
RAG L EAY+ I ++ PT S+W +LLA+CR +K++ELAE +K+ ++PEN G +VL
Sbjct: 412 RAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVL 471
Query: 546 MSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEA 605
+SNIY+A K+W++ AK R +R +KK SWI+I +KVHTF G+ HP +I
Sbjct: 472 LSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICST 531
Query: 606 LNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKN 665
L+ L+ + K GY LHDV+ K +LL HSE+LA+ F R++KN
Sbjct: 532 LDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKN 591
Query: 666 IRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
+R+CVDCH +K S R I+VRD +RFHHF +G CSCGD+W
Sbjct: 592 LRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 139/292 (47%), Gaps = 26/292 (8%)
Query: 142 LDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDV 201
+D +LY AL+++Y K C D+V +VF+ M +
Sbjct: 193 IDLNLYVGTALLDLYAK-----------------------CGMIKDAV-QVFESMQDKSS 228
Query: 202 VSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGY 261
V+W++++AG QN + EAL + R L+ + FTLSS++ + +++G ++H
Sbjct: 229 VTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAV 288
Query: 262 AIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQG 321
+ GF +VF+ SS +DMYAKC + S F + ++ WN+II+G ++ + +
Sbjct: 289 ICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEV 348
Query: 322 IGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCI-IRLGFDDNKFIASSLVD 380
+ F +M + + P +V+FSS++ C H + G++ + G N S +VD
Sbjct: 349 MILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVD 408
Query: 381 MYAKCGNIKMARYIFDKIETRDMVA-WTAIIMGCAMHGHALDAVSLFEKMLE 431
+ + G + A + I + W +++ C ++ + A EK+ E
Sbjct: 409 ILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFE 460
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 140/279 (50%), Gaps = 4/279 (1%)
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
IL + A + V++ HG IR +GDV + + LI+ Y+KC VE + + F + R
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACA-HLTALNLGKQLH 360
+SWN++I +N + + F +M K + + SSV+ AC + AL K+LH
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC-KKLH 185
Query: 361 GCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHAL 420
++ D N ++ ++L+D+YAKCG IK A +F+ ++ + V W++++ G + +
Sbjct: 186 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYE 245
Query: 421 DAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAV 480
+A+ L+ + + +V+ ACS+ + EG K +++ + ++
Sbjct: 246 EALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEG-KQMHAVICKSGFGSNVFVASSA 304
Query: 481 ADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAH 519
D+ + G L E+Y S + + +W+T+++ H
Sbjct: 305 VDMYAKCGSLRESYIIFSEVQ-EKNLELWNTIISGFAKH 342
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 444 bits (1142), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/564 (38%), Positives = 340/564 (60%), Gaps = 29/564 (5%)
Query: 146 LYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWN 205
++ N L+NMY K NL ++ ++FD MP R+V+SW
Sbjct: 96 MFLVNVLINMYVKF-NL-----------------------LNDAHQLFDQMPQRNVISWT 131
Query: 206 TVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRH 265
T+I+ ++ + ++AL+++ M D ++P+ +T SS+L DV +H I+
Sbjct: 132 TMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKE 188
Query: 266 GFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFF 325
G + DVF+ S+LID++AK E +L F + DAI WNSII G QN + D + F
Sbjct: 189 GLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELF 248
Query: 326 RQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKC 385
++M +A Q + +SV+ AC L L LG Q H I++ +D + + ++LVDMY KC
Sbjct: 249 KRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKC 306
Query: 386 GNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVL 445
G+++ A +F++++ RD++ W+ +I G A +G++ +A+ LFE+M G +P Y+ + VL
Sbjct: 307 GSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVL 366
Query: 446 TACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPT 505
ACSHAGL+++GW YF SM+K + I P EHY + DLLG+AG+L++A ++ M +P
Sbjct: 367 FACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPD 426
Query: 506 GSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIH 565
W TLL ACR +++ LAE K++ +DPE+ G Y L+SNIY+ +++W ++R
Sbjct: 427 AVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTR 486
Query: 566 MRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEV 625
MR +G+KK P CSWIE+ ++H F+ GD SHP ++++ LN L+ ++ GYV +T+ V
Sbjct: 487 MRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFV 546
Query: 626 LHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGR 685
L D++ E D LR HSE+LA+AF R+ KN+R+C DCH K SK+ R
Sbjct: 547 LQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIR 606
Query: 686 EIVVRDNSRFHHFMNGSCSCGDYW 709
IV+RD R+HHF +G CSCGDYW
Sbjct: 607 SIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 132/275 (48%), Gaps = 28/275 (10%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
GL+ D++ +AL++++ K LG A VFDE M D
Sbjct: 189 GLESDVFVRSALIDVFAK---LGEPEDALSVFDE---------------------MVTGD 224
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
+ WN++I G AQN AL++ + M + TL+S+L + GM+ H
Sbjct: 225 AIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHV 284
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQ 320
+ ++ +D D+ + ++L+DMY KC +E +LR F + RD I+W+++I+G QNG +
Sbjct: 285 HIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQE 342
Query: 321 GIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRL-GFDDNKFIASSLV 379
+ F +M + KP ++ V+ AC+H L G + +L G D + ++
Sbjct: 343 ALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMI 402
Query: 380 DMYAKCGNIKMARYIFDKIETR-DMVAWTAIIMGC 413
D+ K G + A + +++E D V W ++ C
Sbjct: 403 DLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGAC 437
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 159/317 (50%), Gaps = 16/317 (5%)
Query: 219 EALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLI 278
+A+D ++ G L DS T S ++ + V +G I + +G +F+ + LI
Sbjct: 47 KAMDSLQSHG---LWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103
Query: 279 DMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQV 338
+MY K N + + + F +P R+ ISW ++I+ + + + ML+ V+P
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 339 SFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKI 398
++SSV+ +C ++ + + LH II+ G + + F+ S+L+D++AK G + A +FD++
Sbjct: 164 TYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220
Query: 399 ETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGW 458
T D + W +II G A + + A+ LF++M G +VL AC+ L++ G
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280
Query: 459 K---YFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAA 515
+ + ++D + A+ D+ + G LE+A + M + + WST+++
Sbjct: 281 QAHVHIVKYDQDLILN------NALVDMYCKCGSLEDALRVFNQMKERDVIT-WSTMISG 333
Query: 516 CRAHKSVELAEKVVDKI 532
+ + A K+ +++
Sbjct: 334 LAQNGYSQEALKLFERM 350
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 442 bits (1137), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/512 (41%), Positives = 321/512 (62%), Gaps = 2/512 (0%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKL-KPDSFTLSSILPIFAEHVDVVKGMEI 258
+V WNT+I G A+ G A + REM L +PD+ T ++ DV G I
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 259 HGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKF 318
H IR GF +++ +SL+ +YA C V + + F +P +D ++WNS+I G +NGK
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203
Query: 319 DQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSL 378
++ + + +M +KP + S++ ACA + AL LGK++H +I++G N ++ L
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263
Query: 379 VDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLE-DGVRPC 437
+D+YA+CG ++ A+ +FD++ ++ V+WT++I+G A++G +A+ LF+ M +G+ PC
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC 323
Query: 438 YVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFI 497
+ F+ +L ACSH G+V EG++YF M ++++I P +EH+ + DLL RAG++++AY++I
Sbjct: 324 EITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYI 383
Query: 498 SNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWK 557
+M +QP +W TLL AC H +LAE +IL ++P + G YVL+SN+Y++ +RW
Sbjct: 384 KSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWS 443
Query: 558 DAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEG 617
D K+R M G+KK P S +E+GN+VH FL GDKSHP D I L + ++ EG
Sbjct: 444 DVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEG 503
Query: 618 YVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIK 677
YV S V DV++E K + + HSE++AIAF V+KN+RVC DCH AIK
Sbjct: 504 YVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIK 563
Query: 678 FISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
+SK+ REIVVRD SRFHHF NGSCSC DYW
Sbjct: 564 LVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 152/321 (47%), Gaps = 30/321 (9%)
Query: 102 MRALG-ISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQ 160
MR G + P H +P L+KA T G +Y N+L+++Y
Sbjct: 111 MRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYA--- 167
Query: 161 NLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREA 220
N G SA KVFD+ MP +D+V+WN+VI G A+NG EA
Sbjct: 168 NCGDVASAYKVFDK---------------------MPEKDLVAWNSVINGFAENGKPEEA 206
Query: 221 LDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDM 280
L + EM +KPD FT+ S+L A+ + G +H Y I+ G ++ + L+D+
Sbjct: 207 LALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDL 266
Query: 281 YAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAK-VKPMQVS 339
YA+C RVE + F + ++++SW S+I G NG + I F+ M + + P +++
Sbjct: 267 YARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEIT 326
Query: 340 FSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIA--SSLVDMYAKCGNIKMA-RYIFD 396
F ++ AC+H + G + + +R + I +VD+ A+ G +K A YI
Sbjct: 327 FVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKS 385
Query: 397 KIETRDMVAWTAIIMGCAMHG 417
++V W ++ C +HG
Sbjct: 386 MPMQPNVVIWRTLLGACTVHG 406
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 143/308 (46%), Gaps = 35/308 (11%)
Query: 232 LKPDSFTLSSILPIFAEHVD---------VVKGMEIHGYAIRHGFD-GDVFIGSSLIDMY 281
+ P S T +LP+ + ++ + K +IH ++IRHG D +G LI
Sbjct: 1 MSPFSETSVLLLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYL 60
Query: 282 AKC-------------NRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQM 328
+++E + F WN++I G + G +R+M
Sbjct: 61 VSLPSPPPMSYAHKVFSKIEKPINVFI---------WNTLIRGYAEIGNSISAFSLYREM 111
Query: 329 -LKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGN 387
+ V+P ++ +I A + + LG+ +H +IR GF ++ +SL+ +YA CG+
Sbjct: 112 RVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGD 171
Query: 388 IKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTA 447
+ A +FDK+ +D+VAW ++I G A +G +A++L+ +M G++P +++L+A
Sbjct: 172 VASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSA 231
Query: 448 CSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGS 507
C+ G + G + M K + L + DL R GR+EEA M +
Sbjct: 232 CAKIGALTLGKRVHVYMIK-VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSV 289
Query: 508 VWSTLLAA 515
W++L+
Sbjct: 290 SWTSLIVG 297
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/510 (41%), Positives = 314/510 (61%), Gaps = 3/510 (0%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
D+V++N +I G NG +L + +E+ + S TL S++P+ + H+ ++ IH
Sbjct: 286 DIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPV-SGHLMLIYA--IH 342
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFD 319
GY ++ F + ++L +Y+K N +E + + F P + SWN++I+G QNG +
Sbjct: 343 GYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTE 402
Query: 320 QGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLV 379
I FR+M K++ P V+ + ++ ACA L AL+LGK +H + F+ + +++++L+
Sbjct: 403 DAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALI 462
Query: 380 DMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYV 439
MYAKCG+I AR +FD + ++ V W +I G +HG +A+++F +ML G+ P V
Sbjct: 463 GMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPV 522
Query: 440 AFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISN 499
F+ VL ACSHAGLV EG + FNSM + P ++HYA + D+LGRAG L+ A FI
Sbjct: 523 TFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEA 582
Query: 500 MGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDA 559
M I+P SVW TLL ACR HK LA V +K+ +DP+N+G +VL+SNI+SA + + A
Sbjct: 583 MSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQA 642
Query: 560 AKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYV 619
A +R + + L K P + IEIG H F +GD+SHP +I E L L +M + GY
Sbjct: 643 ATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQ 702
Query: 620 LDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFI 679
+T LHDV++E + +++ HSERLAIAF R+IKN+RVC+DCHT K I
Sbjct: 703 PETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLI 762
Query: 680 SKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
SKI R IVVRD +RFHHF +G CSCGDYW
Sbjct: 763 SKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 171/335 (51%), Gaps = 6/335 (1%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDK-LKPDSFTLSSILP 244
++ RKVFD MP +D + WNT+I+G +N M+ E++ + R++ ++ + D+ TL ILP
Sbjct: 170 VEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILP 229
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS 304
AE ++ GM+IH A + G ++ + I +Y+KC +++ F D ++
Sbjct: 230 AVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVA 289
Query: 305 WNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCII 364
+N++I G NG+ + + F++++ + + + S++P HL L +HG +
Sbjct: 290 YNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM---LIYAIHGYCL 346
Query: 365 RLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVS 424
+ F + ++++L +Y+K I+ AR +FD+ + + +W A+I G +G DA+S
Sbjct: 347 KSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAIS 406
Query: 425 LFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLL 484
LF +M + P V +L+AC+ G + G K+ + + + + A+ +
Sbjct: 407 LFREMQKSEFSPNPVTITCILSACAQLGALSLG-KWVHDLVRSTDFESSIYVSTALIGMY 465
Query: 485 GRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAH 519
+ G + EA M + W+T+++ H
Sbjct: 466 AKCGSIAEARRLFDLM-TKKNEVTWNTMISGYGLH 499
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 142/265 (53%), Gaps = 6/265 (2%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP 244
EI+S RK+FD P + + SWN +I+G QNG+ +A+ + REM + P+ T++ IL
Sbjct: 369 EIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILS 428
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS 304
A+ + G +H F+ +++ ++LI MYAKC + + R F L+ ++ ++
Sbjct: 429 ACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVT 488
Query: 305 WNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCII 364
WN++I+G +G+ + + F +ML + + P V+F V+ AC+H + G ++ +I
Sbjct: 489 WNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMI 548
Query: 365 -RLGFDDNKFIASSLVDMYAKCGNIKMARYIFD--KIETRDMVAWTAIIMGCAMHGHALD 421
R GF+ + + +VD+ + G+++ A + IE V W ++ C +H
Sbjct: 549 HRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSV-WETLLGACRIHKDTNL 607
Query: 422 AVSLFEKMLEDGVRPCYVAFMAVLT 446
A ++ EK+ E + P V + +L+
Sbjct: 608 ARTVSEKLFE--LDPDNVGYHVLLS 630
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 135/267 (50%), Gaps = 2/267 (0%)
Query: 190 RKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREM-GDDKLKPDSFTLSSILPIFAE 248
R +F + DV +N ++ G + N +L + + LKP+S T + + +
Sbjct: 72 RDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASG 131
Query: 249 HVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSI 308
D G IHG A+ G D ++ +GS+++ MY K RVE + + F +P +D I WN++
Sbjct: 132 FRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTM 191
Query: 309 IAGCVQNGKFDQGIGFFRQMLKAKVKPM-QVSFSSVIPACAHLTALNLGKQLHGCIIRLG 367
I+G +N + + I FR ++ + + ++PA A L L LG Q+H + G
Sbjct: 192 ISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTG 251
Query: 368 FDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFE 427
+ ++ + + +Y+KCG IKM +F + D+VA+ A+I G +G ++SLF+
Sbjct: 252 CYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFK 311
Query: 428 KMLEDGVRPCYVAFMAVLTACSHAGLV 454
+++ G R ++++ H L+
Sbjct: 312 ELMLSGARLRSSTLVSLVPVSGHLMLI 338
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/546 (40%), Positives = 332/546 (60%), Gaps = 11/546 (2%)
Query: 171 VFDENPQRG-----KGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVR 225
+FD+N + C +D++R ++ +VVSW +I+G QN EA+D+
Sbjct: 327 LFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFS 386
Query: 226 EMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCN 285
EM ++P+ FT S IL V+ E+H ++ ++ +G++L+D Y K
Sbjct: 387 EMKRKGVRPNEFTYSVILTALP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLG 442
Query: 286 RVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIP 345
+VE + + F + +D ++W++++AG Q G+ + I F ++ K +KP + +FSS++
Sbjct: 443 KVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILN 502
Query: 346 ACAHLTA-LNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMV 404
CA A + GKQ HG I+ D + ++S+L+ MYAK GNI+ A +F + +D+V
Sbjct: 503 VCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLV 562
Query: 405 AWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSM 464
+W ++I G A HG A+ A+ +F++M + V+ V F+ V AC+HAGLV+EG KYF+ M
Sbjct: 563 SWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIM 622
Query: 465 EKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVEL 524
+D +IAP EH + + DL RAG+LE+A I NM ++W T+LAACR HK EL
Sbjct: 623 VRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTEL 682
Query: 525 AEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGN 584
+KI+ + PE+ AYVL+SN+Y+ + W++ AK+R M + +KK P SWIE+ N
Sbjct: 683 GRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKN 742
Query: 585 KVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSER 644
K ++FLAGD+SHP D+I L L +++ GY DTS VL D+DDE+K +L HSER
Sbjct: 743 KTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSER 802
Query: 645 LAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHF-MNGSC 703
LAIAF +IKN+RVC DCH IK I+KI REIVVRD++RFHHF +G C
Sbjct: 803 LAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVC 862
Query: 704 SCGDYW 709
SCGD+W
Sbjct: 863 SCGDFW 868
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 182/352 (51%), Gaps = 23/352 (6%)
Query: 190 RKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEH 249
RKVFD M R+VV+W T+I+G A+N M E L + M ++ +P+SFT ++ L + AE
Sbjct: 148 RKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEE 207
Query: 250 VDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSII 309
+G+++H +++G D + + +SLI++Y KC V + F + ++WNS+I
Sbjct: 208 GVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMI 267
Query: 310 AGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFD 369
+G NG + +G F M V+ + SF+SVI CA+L L +QLH +++ GF
Sbjct: 268 SGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFL 327
Query: 370 DNKFIASSLVDMYAKCGNIKMARYIFDKIE-TRDMVAWTAIIMGCAMHGHALDAVSLFEK 428
++ I ++L+ Y+KC + A +F +I ++V+WTA+I G + +AV LF +
Sbjct: 328 FDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSE 387
Query: 429 MLEDGVRPCYVAFMAVLTACS-------HAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVA 481
M GVRP + +LTA HA +V ++ +++ A+
Sbjct: 388 MKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVG------------TALL 435
Query: 482 DLLGRAGRLEEAYDFISNMGIQPTGSV-WSTLLAACRAHKSVELAEKVVDKI 532
D + G++EEA S GI V WS +LA E A K+ ++
Sbjct: 436 DAYVKLGKVEEAAKVFS--GIDDKDIVAWSAMLAGYAQTGETEAAIKMFGEL 485
Score = 149 bits (377), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 190/402 (47%), Gaps = 40/402 (9%)
Query: 192 VFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVD 251
+FD P RD S+ +++ G +++G +EA + + ++ D SS+L + A D
Sbjct: 49 LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCD 108
Query: 252 VVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAG 311
+ G ++H I+ GF DV +G+SL+D Y K + + + F + R+ ++W ++I+G
Sbjct: 109 ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISG 168
Query: 312 CVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDN 371
+N D+ + F +M +P +F++ + A G Q+H +++ G D
Sbjct: 169 YARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT 228
Query: 372 KFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLE 431
+++SL+++Y KCGN++ AR +FDK E + +V W ++I G A +G L+A+ +F M
Sbjct: 229 IPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRL 288
Query: 432 DGVRPCYVAFMAVLTACS-----------HAGLVDEGWKYFNSMEKDFRIAPG------- 473
+ VR +F +V+ C+ H +V G+ + ++ +A
Sbjct: 289 NYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLD 348
Query: 474 --------------LEHYAAVADLLGRAGRLEEAYDFISNM---GIQPTGSVWSTLLAAC 516
+ A ++ L G+ EEA D S M G++P +S +L A
Sbjct: 349 ALRLFKEIGCVGNVVSWTAMISGFLQNDGK-EEAVDLFSEMKRKGVRPNEFTYSVILTAL 407
Query: 517 RAHKSVELAEKVV----DKILLVDPENMGAYVLMSNIYSAAK 554
E+ +VV ++ V + AYV + + AAK
Sbjct: 408 PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAK 449
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 186/380 (48%), Gaps = 30/380 (7%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
GLD + +N+L+N+Y K N + R +FD +
Sbjct: 224 GLDKTIPVSNSLINLYLKCGN------------------------VRKARILFDKTEVKS 259
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
VV+WN++I+G A NG+ EAL M M + ++ + +S++ + A ++ ++H
Sbjct: 260 VVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHC 319
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLP-YRDAISWNSIIAGCVQNGKFD 319
+++GF D I ++L+ Y+KC + +LR F + + +SW ++I+G +QN +
Sbjct: 320 SVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKE 379
Query: 320 QGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLV 379
+ + F +M + V+P + ++S ++ A ++ ++H +++ ++ + + ++L+
Sbjct: 380 EAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALL 435
Query: 380 DMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYV 439
D Y K G ++ A +F I+ +D+VAW+A++ G A G A+ +F ++ + G++P
Sbjct: 436 DAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEF 495
Query: 440 AFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISN 499
F ++L C+ K F+ R+ L +A+ + + G +E A +
Sbjct: 496 TFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKR 555
Query: 500 MGIQPTGSVWSTLLAACRAH 519
+ S W+++++ H
Sbjct: 556 QREKDLVS-WNSMISGYAQH 574
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/530 (38%), Positives = 329/530 (62%), Gaps = 6/530 (1%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQN-GMFREALDMVREM-GDDKLKPDSFTLSSIL 243
+D RKVFD M V+SW +I G +N + EA+++ EM ++P+ FT SS
Sbjct: 321 VDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAF 380
Query: 244 PIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAI 303
D G ++ G A + G + + +S+I M+ K +R+E + RAF L ++ +
Sbjct: 381 KACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLV 440
Query: 304 SWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCI 363
S+N+ + G +N F+Q ++ + ++ +F+S++ A++ ++ G+Q+H +
Sbjct: 441 SYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQV 500
Query: 364 IRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAV 423
++LG N+ + ++L+ MY+KCG+I A +F+ +E R++++WT++I G A HG A+ +
Sbjct: 501 VKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVL 560
Query: 424 SLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADL 483
F +M+E+GV+P V ++A+L+ACSH GLV EGW++FNSM +D +I P +EHYA + DL
Sbjct: 561 ETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDL 620
Query: 484 LGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAY 543
L RAG L +A++FI+ M Q VW T L ACR H + EL + KIL +DP AY
Sbjct: 621 LCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAY 680
Query: 544 VLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKIN 603
+ +SNIY+ A +W+++ ++R M+ + L K CSWIE+G+K+H F GD +HP +I
Sbjct: 681 IQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIY 740
Query: 604 EALNILLEQMEKEGYVLDTSEVLHDVDDEYKRD----LLRTHSERLAIAFXXXXXXXXXX 659
+ L+ L+ ++++ GYV DT VLH +++E LL HSE++A+AF
Sbjct: 741 DELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRP 800
Query: 660 XRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
RV KN+RVC DCH A+K+IS + GREIV+RD +RFHHF +G CSC DYW
Sbjct: 801 VRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 207/439 (47%), Gaps = 41/439 (9%)
Query: 106 GISPTRHF-FPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGG 164
GI P F SLLK+ ++ D N+L+++Y K G
Sbjct: 56 GIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKS---GD 112
Query: 165 FGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMV 224
A VF+ + GK RDVVSW+ ++A NG +A+ +
Sbjct: 113 SAKAEDVFETMRRFGK------------------RDVVSWSAMMACYGNNGRELDAIKVF 154
Query: 225 REMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHG-FDGDVFIGSSLIDMYAK 283
E + L P+ + ++++ + V G G+ ++ G F+ DV +G SLIDM+ K
Sbjct: 155 VEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK 214
Query: 284 C-NRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSS 342
N E++ + F + + ++W +I C+Q G + I FF M+ + + + + SS
Sbjct: 215 GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSS 274
Query: 343 VIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKC---GNIKMARYIFDKIE 399
V ACA L L+LGKQLH IR G D+ + SLVDMYAKC G++ R +FD++E
Sbjct: 275 VFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRME 332
Query: 400 TRDMVAWTAIIMGCAMHGH-ALDAVSLFEKMLEDG-VRPCYVAFMAVLTACSHAGLVDEG 457
+++WTA+I G + + A +A++LF +M+ G V P + F + AC + G
Sbjct: 333 DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVG 392
Query: 458 WKYFNSMEKDFRIAPGLEHYAAVAD----LLGRAGRLEEAYDFISNMGIQPTGSVWSTLL 513
+ K GL ++VA+ + ++ R+E+A ++ + S + L
Sbjct: 393 KQVLGQAFK-----RGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLD 447
Query: 514 AACRAHKSVELAEKVVDKI 532
CR + + E A K++ +I
Sbjct: 448 GTCR-NLNFEQAFKLLSEI 465
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 114/242 (47%), Gaps = 6/242 (2%)
Query: 215 GMFREALDMVREMGDDKLKP-DSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFI 273
G R A+ + M D ++P DS T SS+L D G +H I + D +
Sbjct: 40 GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVL 99
Query: 274 GSSLIDMYAKCN---RVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLK 330
+SLI +Y+K + E RD +SW++++A NG+ I F + L+
Sbjct: 100 YNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE 159
Query: 331 AKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLG-FDDNKFIASSLVDMYAKCGN-I 388
+ P +++VI AC++ + +G+ G +++ G F+ + + SL+DM+ K N
Sbjct: 160 LGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSF 219
Query: 389 KMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTAC 448
+ A +FDK+ ++V WT +I C G +A+ F M+ G +V +AC
Sbjct: 220 ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Query: 449 SH 450
+
Sbjct: 280 AE 281
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 75/134 (55%), Gaps = 4/134 (2%)
Query: 328 MLKAKVKPM-QVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCG 386
M + ++PM V+FSS++ +C LGK +H +I + + + +SL+ +Y+K G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 387 NIKMARYIFDKIE---TRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMA 443
+ A +F+ + RD+V+W+A++ +G LDA+ +F + LE G+ P + A
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 444 VLTACSHAGLVDEG 457
V+ ACS++ V G
Sbjct: 172 VIRACSNSDFVGVG 185
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 430 bits (1105), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/614 (37%), Positives = 335/614 (54%), Gaps = 62/614 (10%)
Query: 101 AMRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQ 160
M + P + FP +LKA + GL L+ N L++MY K
Sbjct: 130 TMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKC- 188
Query: 161 NLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREA 220
GF + R V D M RDVVSWN+++ G AQN F +A
Sbjct: 189 ---GF--------------------LSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDA 225
Query: 221 LDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDM 280
L++ REM K+ D+ T++S+LP A+ + +V M
Sbjct: 226 LEVCREMESVKISHDAGTMASLLP-----------------AVSNTTTENV--------M 260
Query: 281 YAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSF 340
Y K F+ + + +SWN +I ++N + + + +M +P VS
Sbjct: 261 YVK--------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSI 312
Query: 341 SSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIET 400
+SV+PAC +AL+LGK++HG I R N + ++L+DMYAKCG ++ AR +F+ +++
Sbjct: 313 TSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKS 372
Query: 401 RDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKY 460
RD+V+WTA+I G DAV+LF K+ + G+ P +AF+ L ACSHAGL++EG
Sbjct: 373 RDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSC 432
Query: 461 FNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHK 520
F M ++I P LEH A + DLLGRAG+++EAY FI +M ++P VW LL ACR H
Sbjct: 433 FKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHS 492
Query: 521 SVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWI 580
++ DK+ + PE G YVL+SNIY+ A RW++ +R M+SKGLKK P S +
Sbjct: 493 DTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNV 552
Query: 581 EIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRT 640
E+ +HTFL GD+SHP D+I L++L+++M++ GYV D+ LHDV++E K L
Sbjct: 553 EVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAV 612
Query: 641 HSERLAIAFXXXXXXXXX-----XXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRF 695
HSE+LAI F R+ KN+R+C DCH A K IS+I REI++RD +RF
Sbjct: 613 HSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRF 672
Query: 696 HHFMNGSCSCGDYW 709
H F G CSCGDYW
Sbjct: 673 HVFRFGVCSCGDYW 686
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 164/356 (46%), Gaps = 39/356 (10%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP 244
++ S RKVFD +P R+V+ N +I NG + E + + M ++PD +T +L
Sbjct: 89 DVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLK 148
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS 304
+ +V G +IHG A + G +F+G+ L+ MY KC + + + RD +S
Sbjct: 149 ACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVS 208
Query: 305 WNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCII 364
WNS++ G QN +FD + R+M K+ + +S++PA ++ T N+
Sbjct: 209 WNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV--------- 259
Query: 365 RLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVS 424
MY K +F K+ + +V+W +I + ++AV
Sbjct: 260 ----------------MYVK--------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVE 295
Query: 425 LFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLL 484
L+ +M DG P V+ +VL AC + G K +E+ ++ P L A+ D+
Sbjct: 296 LYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERK-KLIPNLLLENALIDMY 354
Query: 485 GRAGRLEEAYDFISNMGIQPTGSVWSTLLAA----CRAHKSVELAEKVVDKILLVD 536
+ G LE+A D NM + S W+ +++A R +V L K+ D L+ D
Sbjct: 355 AKCGCLEKARDVFENMKSRDVVS-WTAMISAYGFSGRGCDAVALFSKLQDSGLVPD 409
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 136/307 (44%), Gaps = 11/307 (3%)
Query: 226 EMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCN 285
E+ + F L +L + D+ +H I + +G L+ YA
Sbjct: 32 ELDQKSPQETVFLLGQVLDTYP---DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLK 88
Query: 286 RVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIP 345
V + + F +P R+ I N +I V NG + +G+ F M V+P +F V+
Sbjct: 89 DVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLK 148
Query: 346 ACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVA 405
AC+ + +G+++HG ++G F+ + LV MY KCG + AR + D++ RD+V+
Sbjct: 149 ACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVS 208
Query: 406 WTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSME 465
W ++++G A + DA+ + +M + ++L A S+ E Y M
Sbjct: 209 WNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTENVMYVKDMF 266
Query: 466 KDFRIA-PGLEHYAAVADLLGRAGRLEEAYDFISNM---GIQPTGSVWSTLLAACRAHKS 521
F++ L + + + + EA + S M G +P +++L AC +
Sbjct: 267 --FKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324
Query: 522 VELAEKV 528
+ L +K+
Sbjct: 325 LSLGKKI 331
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 429 bits (1104), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/592 (39%), Positives = 344/592 (58%), Gaps = 31/592 (5%)
Query: 145 DLYTANALMNMYCKVQNLGGFGSANKVFDENPQR----------GKGCKCEIDSVRKVFD 194
+++ N L++MY K G AN VF + G + ++F+
Sbjct: 263 NMFVGNCLVDMYAKC---GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFE 319
Query: 195 LMPAR----DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHV 250
M DVV+W+ I+G AQ G+ EAL + R+M +KP+ TL S+L A
Sbjct: 320 KMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVG 379
Query: 251 DVVKGMEIHGYAIRHGFD------GDV-FIGSSLIDMYAKCNRVEHSLRAFY--LLP-YR 300
++ G EIH YAI++ D GD + + LIDMYAKC +V+ + RA + L P R
Sbjct: 380 ALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD-TARAMFDSLSPKER 438
Query: 301 DAISWNSIIAGCVQNGKFDQGIGFFRQMLK--AKVKPMQVSFSSVIPACAHLTALNLGKQ 358
D ++W +I G Q+G ++ + +M + + +P + S + ACA L AL +GKQ
Sbjct: 439 DVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQ 498
Query: 359 LHGCIIRLGFDDNK-FIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHG 417
+H +R + F+++ L+DMYAKCG+I AR +FD + ++ V WT+++ G MHG
Sbjct: 499 IHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHG 558
Query: 418 HALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHY 477
+ +A+ +F++M G + V + VL ACSH+G++D+G +YFN M+ F ++PG EHY
Sbjct: 559 YGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHY 618
Query: 478 AAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDP 537
A + DLLGRAGRL A I M ++P VW L+ CR H VEL E +KI +
Sbjct: 619 ACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELAS 678
Query: 538 ENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHP 597
+ G+Y L+SN+Y+ A RWKD ++R MR KG+KK P CSW+E TF GDK+HP
Sbjct: 679 NHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHP 738
Query: 598 YYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXX 657
+ +I + L +++++ GYV +T LHDVDDE K DLL HSE+LA+A+
Sbjct: 739 HAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQG 798
Query: 658 XXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
R+ KN+RVC DCHTA ++S+I+ +I++RD+SRFHHF NGSCSC YW
Sbjct: 799 AAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 137/276 (49%), Gaps = 6/276 (2%)
Query: 181 GCKCEIDSVRKVFDLMPARD--VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFT 238
GC S+ + F P D V WN++I NG + L + M PD++T
Sbjct: 73 GCLSHAVSLLRRF---PPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYT 129
Query: 239 LSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLP 298
+ E V G H ++ GF +VF+G++L+ MY++C + + + F +
Sbjct: 130 FPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMS 189
Query: 299 YRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKA-KVKPMQVSFSSVIPACAHLTALNLGK 357
D +SWNSII + GK + F +M +P ++ +V+P CA L +LGK
Sbjct: 190 VWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGK 249
Query: 358 QLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHG 417
QLH + N F+ + LVDMYAKCG + A +F + +D+V+W A++ G + G
Sbjct: 250 QLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIG 309
Query: 418 HALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGL 453
DAV LFEKM E+ ++ V + A ++ + GL
Sbjct: 310 RFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGL 345
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 427 bits (1099), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/634 (35%), Positives = 350/634 (55%), Gaps = 57/634 (8%)
Query: 109 PTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGFGSA 168
P ++ FP L+KA+ + D++ AN+L++ Y +L
Sbjct: 129 PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDL------ 182
Query: 169 NKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMG 228
DS KVF + +DVVSWN++I G Q G +AL++ ++M
Sbjct: 183 ------------------DSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 229 DDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVE 288
+ +K T+ +L A+ ++ G ++ Y + + ++ + ++++DMY KC +E
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284
Query: 289 HSLRAF-------------------------------YLLPYRDAISWNSIIAGCVQNGK 317
+ R F +P +D ++WN++I+ QNGK
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344
Query: 318 FDQGIGFFRQM-LKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIAS 376
++ + F ++ L+ +K Q++ S + ACA + AL LG+ +H I + G N + S
Sbjct: 345 PNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTS 404
Query: 377 SLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRP 436
+L+ MY+KCG+++ +R +F+ +E RD+ W+A+I G AMHG +AV +F KM E V+P
Sbjct: 405 ALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKP 464
Query: 437 CYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDF 496
V F V ACSH GLVDE F+ ME ++ I P +HYA + D+LGR+G LE+A F
Sbjct: 465 NGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKF 524
Query: 497 ISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRW 556
I M I P+ SVW LL AC+ H ++ LAE ++L ++P N GA+VL+SNIY+ +W
Sbjct: 525 IEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKW 584
Query: 557 KDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKE 616
++ ++LR HMR GLKK P CS IEI +H FL+GD +HP +K+ L+ ++E+++
Sbjct: 585 ENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSN 644
Query: 617 GYVLDTSEVLHDV-DDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTA 675
GY + S+VL + ++E K L HSE+LAI + RVIKN+RVC DCH+
Sbjct: 645 GYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSV 704
Query: 676 IKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
K IS++ REI+VRD RFHHF NG CSC D+W
Sbjct: 705 AKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 177/370 (47%), Gaps = 41/370 (11%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNG----MFREALDMVREMGDDKLKPDSFTLSS 241
++ RKVFD +P + +WNT+I A LDMV E + P+ +T
Sbjct: 80 LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSE---SQCYPNKYTFPF 136
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
++ AE + G +HG A++ DVF+ +SLI Y C ++ + + F + +D
Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKD 196
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
+SWNS+I G VQ G D+ + F++M VK V+ V+ ACA + L G+Q+
Sbjct: 197 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCS 256
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAM------ 415
I + N +A++++DMY KCG+I+ A+ +FD +E +D V WT ++ G A+
Sbjct: 257 YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEA 316
Query: 416 -------------------------HGHALDAVSLFEKM-LEDGVRPCYVAFMAVLTACS 449
+G +A+ +F ++ L+ ++ + ++ L+AC+
Sbjct: 317 AREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACA 376
Query: 450 HAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVW 509
G ++ G ++ +S K I +A+ + + G LE++ + +++ + VW
Sbjct: 377 QVGALELG-RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDV-FVW 434
Query: 510 STLLAACRAH 519
S ++ H
Sbjct: 435 SAMIGGLAMH 444
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 427 bits (1098), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/605 (36%), Positives = 352/605 (58%), Gaps = 29/605 (4%)
Query: 107 ISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDF-DLYTANALMNMYCKVQNLGGF 165
+ P + S+ KA + GL+ +++ +AL++MY K F
Sbjct: 161 VLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVK------F 214
Query: 166 GSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVR 225
G + + V D + +DVV +I G +Q G EA+ +
Sbjct: 215 GKTREA------------------KLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQ 256
Query: 226 EMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCN 285
M +K++P+ +T +S+L D+ G IHG ++ GF+ + +SL+ MY +C+
Sbjct: 257 SMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCS 316
Query: 286 RVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIP 345
V+ SLR F + Y + +SW S+I+G VQNG+ + + FR+M++ +KP + SS +
Sbjct: 317 LVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALR 376
Query: 346 ACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVA 405
C++L G+Q+HG + + GFD +K+ S L+D+Y KCG MAR +FD + D+++
Sbjct: 377 GCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVIS 436
Query: 406 WTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSME 465
+I A +G +A+ LFE+M+ G++P V ++VL AC+++ LV+EG + F+S
Sbjct: 437 LNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFR 496
Query: 466 KDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELA 525
KD +I +HYA + DLLGRAGRLEEA + ++ I P +W TLL+AC+ H+ VE+A
Sbjct: 497 KD-KIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMA 554
Query: 526 EKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNK 585
E++ KIL ++P + G +LMSN+Y++ +W +++ M+ LKK PA SW+EI +
Sbjct: 555 ERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKE 614
Query: 586 VHTFLAGDK-SHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSER 644
HTF+AGD SHP ++I E L L+++ + GYV D S V D+++ K L HSE+
Sbjct: 615 THTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEK 674
Query: 645 LAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCS 704
LAIAF R++KN+RVCVDCH+ IK +S+++ REI+ RD+ RFHHF +GSCS
Sbjct: 675 LAIAF-AVWRNVGGSIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCS 733
Query: 705 CGDYW 709
CGDYW
Sbjct: 734 CGDYW 738
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 203/423 (47%), Gaps = 50/423 (11%)
Query: 183 KC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
KC +ID R+VFD M R +V+WN++IA ++ +EA++M R M + + PD +TLSS
Sbjct: 111 KCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSS 170
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFD-GDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR 300
+ F++ + HG A+ G + +VF+GS+L+DMY K + + + +
Sbjct: 171 VFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEK 230
Query: 301 DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLH 360
D + ++I G Q G+ + + F+ ML KV+P + +++SV+ +C +L + GK +H
Sbjct: 231 DVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIH 290
Query: 361 GCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHAL 420
G +++ GF+ +SL+ MY +C + + +F IE + V+WT++I G +G
Sbjct: 291 GLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREE 350
Query: 421 DAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYA-- 478
A+ F KM+ D ++P + L CS+ + +EG + + K + YA
Sbjct: 351 MALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTK---YGFDRDKYAGS 407
Query: 479 AVADLLGRAG-----RL--------------------------EEAYDFIS---NMGIQP 504
+ DL G+ G RL EA D N+G+QP
Sbjct: 408 GLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQP 467
Query: 505 TGSVWSTLLAACRAHKSVELAEKVV-----DKILLVDPENMGAYVLMSNIYSAAKRWKDA 559
++L AC + VE ++ DKI+L + Y M ++ A R ++A
Sbjct: 468 NDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDH----YACMVDLLGRAGRLEEA 523
Query: 560 AKL 562
L
Sbjct: 524 EML 526
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 112/201 (55%), Gaps = 2/201 (0%)
Query: 258 IHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGK 317
I + ++ GF ++ GS L+D KC ++++ + F + R ++WNS+IA +++ +
Sbjct: 87 IQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRR 145
Query: 318 FDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFD-DNKFIAS 376
+ + +R M+ V P + + SSV A + L+ ++ HG + LG + N F+ S
Sbjct: 146 SKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGS 205
Query: 377 SLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRP 436
+LVDMY K G + A+ + D++E +D+V TA+I+G + G +AV F+ ML + V+P
Sbjct: 206 ALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQP 265
Query: 437 CYVAFMAVLTACSHAGLVDEG 457
+ +VL +C + + G
Sbjct: 266 NEYTYASVLISCGNLKDIGNG 286
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 426 bits (1096), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/613 (36%), Positives = 352/613 (57%), Gaps = 45/613 (7%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGF-GSANKVFDENPQRGKGCKCEIDS--VRKVF---- 193
G + +NAL+++Y K + SA KVFDE ++ + + + V+ +
Sbjct: 179 GAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLG 238
Query: 194 -DLMPARD----VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAE 248
+L+ D +V++N +I+G G ++EAL+MVR M ++ D FT S++ A
Sbjct: 239 EELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACAT 298
Query: 249 HVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSI 308
+ G ++H Y +R D +SL+ +Y KC + + + F +P +D +SWN++
Sbjct: 299 AGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNAL 357
Query: 309 IAGCV-------------------------------QNGKFDQGIGFFRQMLKAKVKPMQ 337
++G V +NG ++G+ F M + +P
Sbjct: 358 LSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCD 417
Query: 338 VSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDK 397
+FS I +CA L A G+Q H ++++GFD + ++L+ MYAKCG ++ AR +F
Sbjct: 418 YAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRT 477
Query: 398 IETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG 457
+ D V+W A+I HGH +AV ++E+ML+ G+RP + + VLTACSHAGLVD+G
Sbjct: 478 MPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQG 537
Query: 458 WKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACR 517
KYF+SME +RI PG +HYA + DLL R+G+ +A I ++ +PT +W LL+ CR
Sbjct: 538 RKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCR 597
Query: 518 AHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPAC 577
H ++EL DK+ + PE+ G Y+L+SN+++A +W++ A++R MR +G+KK AC
Sbjct: 598 VHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVAC 657
Query: 578 SWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVD-DEYKRD 636
SWIE+ +VHTFL D SHP + + L L ++M + GYV DTS VLHDV+ D +K D
Sbjct: 658 SWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKED 717
Query: 637 LLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFH 696
+L THSE++A+AF R+ KN+R C DCH +F+S +V R+I++RD RFH
Sbjct: 718 MLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFH 777
Query: 697 HFMNGSCSCGDYW 709
HF NG CSCG++W
Sbjct: 778 HFRNGECSCGNFW 790
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 181/368 (49%), Gaps = 59/368 (16%)
Query: 150 NALMNMYCKVQNLGGFGSANKVFDE--NPQR--------GKGCKCEIDSVRKVFDLMPA- 198
N L+++YCK L A ++FDE P + G +I R VF+ P
Sbjct: 53 NRLIDVYCKSSELN---YARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVC 109
Query: 199 -RDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKG-M 256
RD V +N +I G + N A+++ +M + KPD+FT +S+L A D K +
Sbjct: 110 MRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCV 169
Query: 257 EIHGYAIRHGFDGDVFIGSSLIDMYAKC---NRVEHSLR-AFYLLPYRDAISWNSIIAGC 312
+ H A++ G + ++L+ +Y+KC + HS R F + +D SW +++ G
Sbjct: 170 QFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGY 229
Query: 313 VQNGKFDQG-------------------------IGFF-------RQMLKAKVKPMQVSF 340
V+NG FD G GF+ R+M+ + ++ + ++
Sbjct: 230 VKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTY 289
Query: 341 SSVIPACAHLTALNLGKQLHGCIIRLGFDDNKF-IASSLVDMYAKCGNIKMARYIFDKIE 399
SVI ACA L LGKQ+H ++R +D F +SLV +Y KCG AR IF+K+
Sbjct: 290 PSVIRACATAGLLQLGKQVHAYVLRR--EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMP 347
Query: 400 TRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWK 459
+D+V+W A++ G GH +A +F++M E + +++M +++ + G +EG K
Sbjct: 348 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI----LSWMIMISGLAENGFGEEGLK 403
Query: 460 YFNSMEKD 467
F+ M+++
Sbjct: 404 LFSCMKRE 411
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 118/296 (39%), Gaps = 67/296 (22%)
Query: 351 TALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIET---------- 400
T+L L + +HG II GF I + L+D+Y K + AR +FD+I
Sbjct: 28 TSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMV 87
Query: 401 -----------------------RDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPC 437
RD V + A+I G + + A++LF KM +G +P
Sbjct: 88 SGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPD 147
Query: 438 YVAFMAVLTACS------------HAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLG 485
F +VL + HA + G Y S+ + A+ LL
Sbjct: 148 NFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSN--ALVSVYSKCASSPSLLH 205
Query: 486 RAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVL 545
A ++ +D I ++ W+T++ + +L E++++ + D + AY
Sbjct: 206 SARKV---FDEI----LEKDERSWTTMMTGYVKNGYFDLGEELLEG--MDDNMKLVAYNA 256
Query: 546 MSNIYSAAKRWKDAAKLRIHMRSKGLKKTP--------ACS---WIEIGNKVHTFL 590
M + Y +++A ++ M S G++ AC+ +++G +VH ++
Sbjct: 257 MISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV 312
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 426 bits (1094), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/618 (36%), Positives = 344/618 (55%), Gaps = 14/618 (2%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
MR + TR ++LK S+ G + L + L+ MY N
Sbjct: 130 MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA---N 186
Query: 162 LGGFGSANKVF---DE------NPQRGKGCKCE-IDSVRKVFDLMPARDVVSWNTVIAGN 211
+G A KVF D+ N G C I+ ++F M +D VSW +I G
Sbjct: 187 VGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGL 245
Query: 212 AQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDV 271
AQNG+ +EA++ REM LK D + S+LP + +G +IH IR F +
Sbjct: 246 AQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHI 305
Query: 272 FIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKA 331
++GS+LIDMY KC + ++ F + ++ +SW +++ G Q G+ ++ + F M ++
Sbjct: 306 YVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRS 365
Query: 332 KVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMA 391
+ P + I ACA++++L G Q HG I G +++SLV +Y KCG+I +
Sbjct: 366 GIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDS 425
Query: 392 RYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHA 451
+F+++ RD V+WTA++ A G A++ + LF+KM++ G++P V V++ACS A
Sbjct: 426 TRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRA 485
Query: 452 GLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWST 511
GLV++G +YF M ++ I P + HY+ + DL R+GRLEEA FI+ M P W+T
Sbjct: 486 GLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTT 545
Query: 512 LLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGL 571
LL+ACR ++E+ + + ++ +DP + Y L+S+IY++ +W A+LR MR K +
Sbjct: 546 LLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNV 605
Query: 572 KKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDD 631
KK P SWI+ K+H+F A D+S PY D+I L L ++ GY DTS V HDV++
Sbjct: 606 KKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEE 665
Query: 632 EYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRD 691
K +L HSERLAIAF RV KN+RVCVDCH A K IS + GREI+VRD
Sbjct: 666 AVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRD 725
Query: 692 NSRFHHFMNGSCSCGDYW 709
RFH F +G+CSCGD+W
Sbjct: 726 AVRFHRFKDGTCSCGDFW 743
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 175/441 (39%), Gaps = 88/441 (19%)
Query: 234 PDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFD----GDVFIGSSLIDMYAKCNRVEH 289
P++F ++I+ +A M+ YA R FD ++F ++L+ Y+K +
Sbjct: 39 PETFLYNNIVHAYAL-------MKSSTYA-RRVFDRIPQPNLFSWNNLLLAYSKAGLISE 90
Query: 290 SLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKA-KVKPMQVSFSSVIPACA 348
F LP RD ++WN +I G +G + + M++ +V+ +++ +
Sbjct: 91 MESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSS 150
Query: 349 HLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR------- 401
++LGKQ+HG +I+LGF+ + S L+ MYA G I A+ +F ++ R
Sbjct: 151 SNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNS 210
Query: 402 -----------------------DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCY 438
D V+W A+I G A +G A +A+ F +M G++
Sbjct: 211 LMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQ 270
Query: 439 VAFMAVLTACSHAGLVDEGWK--------------YFNSMEKDFRIAPGLEHYA------ 478
F +VL AC G ++EG + Y S D HYA
Sbjct: 271 YPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDR 330
Query: 479 ----------AVADLLGRAGRLEEAYDFISNM---GIQPTGSVWSTLLAACRAHKSVELA 525
A+ G+ GR EEA +M GI P ++AC S+E
Sbjct: 331 MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG 390
Query: 526 EKVVDKILLVDPENMGAYVLMSN----IYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIE 581
+ K + + YV +SN +Y D+ +L M + A SW
Sbjct: 391 SQFHGKAI---TSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-----DAVSWTA 442
Query: 582 IGNKVHTFLAGDKSHPYYDKI 602
+ + F ++ +DK+
Sbjct: 443 MVSAYAQFGRAVETIQLFDKM 463
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 340 FSSVIPACAHLTALNLG---KQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFD 396
+S I C L A N K +HG IIR F+ +++V YA + AR +FD
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFD 65
Query: 397 KIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLE-DGVRPCYVAFMAVLTACSHAGLVD 455
+I ++ +W +++ + G + S FEK+ + DG V + ++ S +GLV
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDG-----VTWNVLIEGYSLSGLVG 120
Query: 456 EGWKYFNSMEKDF 468
K +N+M +DF
Sbjct: 121 AAVKAYNTMMRDF 133
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 425 bits (1093), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/529 (39%), Positives = 324/529 (61%), Gaps = 2/529 (0%)
Query: 183 KC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
KC ++ + R VF+ M +D VSWN++I+G Q+G EA+ + + M + + D T
Sbjct: 354 KCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLM 413
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
++ + D+ G +H I+ G D+ + ++LIDMYAKC V SL+ F + D
Sbjct: 414 LISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGD 473
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
++WN++I+ CV+ G F G+ QM K++V P +F +P CA L A LGK++H
Sbjct: 474 TVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHC 533
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALD 421
C++R G++ I ++L++MY+KCG ++ + +F+++ RD+V WT +I M+G
Sbjct: 534 CLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEK 593
Query: 422 AVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVA 481
A+ F M + G+ P V F+A++ ACSH+GLVDEG F M+ ++I P +EHYA V
Sbjct: 594 ALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVV 653
Query: 482 DLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMG 541
DLL R+ ++ +A +FI M I+P S+W+++L ACR +E AE+V +I+ ++P++ G
Sbjct: 654 DLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPG 713
Query: 542 AYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDK 601
+L SN Y+A ++W + +R ++ K + K P SWIE+G VH F +GD S P +
Sbjct: 714 YSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEA 773
Query: 602 INEALNILLEQMEKEGYVLDTSEVLHDV-DDEYKRDLLRTHSERLAIAFXXXXXXXXXXX 660
I ++L IL M KEGY+ D EV ++ ++E KR L+ HSERLAIAF
Sbjct: 774 IYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPL 833
Query: 661 RVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
+V+KN+RVC DCH K ISKIVGREI+VRD +RFH F +G+CSC D W
Sbjct: 834 QVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 221/415 (53%), Gaps = 27/415 (6%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
+R +SP ++ FPS++KA G + DL+ NAL++MY +
Sbjct: 97 LRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSR--- 153
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
+G A +VFDE MP RD+VSWN++I+G + +G + EAL
Sbjct: 154 MGLLTRARQVFDE---------------------MPVRDLVSWNSLISGYSSHGYYEEAL 192
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMY 281
++ E+ + + PDSFT+SS+LP F + V +G +HG+A++ G + V + + L+ MY
Sbjct: 193 EIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMY 252
Query: 282 AKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFS 341
K R + R F + RD++S+N++I G ++ ++ + F + L + KP ++ S
Sbjct: 253 LKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVS 311
Query: 342 SVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR 401
SV+ AC HL L+L K ++ +++ GF + + L+D+YAKCG++ AR +F+ +E +
Sbjct: 312 SVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK 371
Query: 402 DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYF 461
D V+W +II G G ++A+ LF+ M+ + ++ ++ +++ + + G K
Sbjct: 372 DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG-KGL 430
Query: 462 NSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAAC 516
+S I L A+ D+ + G + ++ S+MG T + W+T+++AC
Sbjct: 431 HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVT-WNTVISAC 484
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 172/320 (53%), Gaps = 5/320 (1%)
Query: 197 PARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGM 256
PA++V WN++I ++NG+F EAL+ ++ + K+ PD +T S++ A D G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 257 EIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNG 316
++ + GF+ D+F+G++L+DMY++ + + + F +P RD +SWNS+I+G +G
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 317 KFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIAS 376
+++ + + ++ + + P + SSV+PA +L + G+ LHG ++ G + + +
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246
Query: 377 SLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRP 436
LV MY K AR +FD+++ RD V++ +I G ++V +F + L D +P
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKP 305
Query: 437 CYVAFMAVLTACSHAGLVDEGWKYFNSMEK-DFRIAPGLEHYAAVADLLGRAGRLEEAYD 495
+ +VL AC H + +N M K F + + + + D+ + G + A D
Sbjct: 306 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN--ILIDVYAKCGDMITARD 363
Query: 496 FISNMGIQPTGSVWSTLLAA 515
++M + T S W+++++
Sbjct: 364 VFNSMECKDTVS-WNSIISG 382
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 134/260 (51%), Gaps = 1/260 (0%)
Query: 190 RKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEH 249
R+VFD M RD VS+NT+I G + M E++ M E D+ KPD T+SS+L
Sbjct: 262 RRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHL 320
Query: 250 VDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSII 309
D+ I+ Y ++ GF + + + LID+YAKC + + F + +D +SWNSII
Sbjct: 321 RDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSII 380
Query: 310 AGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFD 369
+G +Q+G + + F+ M+ + + +++ +I L L GK LH I+ G
Sbjct: 381 SGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGIC 440
Query: 370 DNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM 429
+ ++++L+DMYAKCG + + IF + T D V W +I C G + + +M
Sbjct: 441 IDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQM 500
Query: 430 LEDGVRPCYVAFMAVLTACS 449
+ V P F+ L C+
Sbjct: 501 RKSEVVPDMATFLVTLPMCA 520
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 111/201 (55%), Gaps = 1/201 (0%)
Query: 258 IHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLL-PYRDAISWNSIIAGCVQNG 316
IH I G D F LID Y+ SL F + P ++ WNSII +NG
Sbjct: 26 IHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNG 85
Query: 317 KFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIAS 376
F + + F+ ++ ++KV P + +F SVI ACA L +G ++ I+ +GF+ + F+ +
Sbjct: 86 LFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGN 145
Query: 377 SLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRP 436
+LVDMY++ G + AR +FD++ RD+V+W ++I G + HG+ +A+ ++ ++ + P
Sbjct: 146 ALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVP 205
Query: 437 CYVAFMAVLTACSHAGLVDEG 457
+VL A + +V +G
Sbjct: 206 DSFTVSSVLPAFGNLLVVKQG 226
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 7/197 (3%)
Query: 336 MQVSFSS--VIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARY 393
MQ SS + A + + LN +++H +I LG D + F + L+D Y+ +
Sbjct: 1 MQTRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLS 60
Query: 394 IFDKIE-TRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAG 452
+F ++ +++ W +II + +G +A+ + K+ E V P F +V+ AC AG
Sbjct: 61 VFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AG 118
Query: 453 LVD-EGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWST 511
L D E D L A+ D+ R G L A M ++ S W++
Sbjct: 119 LFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVS-WNS 177
Query: 512 LLAACRAHKSVELAEKV 528
L++ +H E A ++
Sbjct: 178 LISGYSSHGYYEEALEI 194
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 200/510 (39%), Positives = 320/510 (62%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
D+V+WN ++AG Q+ + L + M + D FTL+++ + +G ++H
Sbjct: 481 DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVH 540
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFD 319
YAI+ G+D D+++ S ++DMY KC + + AF +P D ++W ++I+GC++NG+ +
Sbjct: 541 AYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEE 600
Query: 320 QGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLV 379
+ F QM V P + + +++ A + LTAL G+Q+H ++L ++ F+ +SLV
Sbjct: 601 RAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLV 660
Query: 380 DMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYV 439
DMYAKCG+I A +F +IE ++ AW A+++G A HG + + LF++M G++P V
Sbjct: 661 DMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKV 720
Query: 440 AFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISN 499
F+ VL+ACSH+GLV E +K+ SM D+ I P +EHY+ +AD LGRAG +++A + I +
Sbjct: 721 TFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIES 780
Query: 500 MGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDA 559
M ++ + S++ TLLAACR E ++V K+L ++P + AYVL+SN+Y+AA +W +
Sbjct: 781 MSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEM 840
Query: 560 AKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYV 619
R M+ +KK P SWIE+ NK+H F+ D+S+ + I + ++ +++EGYV
Sbjct: 841 KLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYV 900
Query: 620 LDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFI 679
+T L DV++E K L HSE+LA+AF RVIKN+RVC DCH A+K+I
Sbjct: 901 PETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYI 960
Query: 680 SKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
+K+ REIV+RD +RFH F +G CSCGDYW
Sbjct: 961 AKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 193/383 (50%), Gaps = 34/383 (8%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
GLD L +N+L+NMYCK++ G R VFD M RD
Sbjct: 345 GLDLMLTVSNSLINMYCKLRKFG------------------------FARTVFDNMSERD 380
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI---FAEHVDVVKGME 257
++SWN+VIAG AQNG+ EA+ + ++ LKPD +T++S+L E + + K +
Sbjct: 381 LISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSK--Q 438
Query: 258 IHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGK 317
+H +AI+ D F+ ++LID Y++ NR + D ++WN+++AG Q+
Sbjct: 439 VHVHAIKINNVSDSFVSTALIDAYSR-NRCMKEAEILFERHNFDLVAWNAMMAGYTQSHD 497
Query: 318 FDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASS 377
+ + F M K + + ++V C L A+N GKQ+H I+ G+D + +++S
Sbjct: 498 GHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSG 557
Query: 378 LVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPC 437
++DMY KCG++ A++ FD I D VAWT +I GC +G A +F +M GV P
Sbjct: 558 ILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPD 617
Query: 438 YVAFMAVLTACSHAGLVDEGWK-YFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDF 496
+ A S +++G + + N+++ + P + ++ D+ + G +++AY
Sbjct: 618 EFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCL 675
Query: 497 ISNMGIQPTGSVWSTLLAACRAH 519
+ + + W+ +L H
Sbjct: 676 FKRIEMMNI-TAWNAMLVGLAQH 697
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 162/349 (46%), Gaps = 16/349 (4%)
Query: 194 DLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVV 253
D +++ N ++ +G + L +M + ++ D T +L + +
Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA 332
Query: 254 KGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCV 313
G ++H A++ G D + + +SLI+MY K + + F + RD ISWNS+IAG
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392
Query: 314 QNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHL-TALNLGKQLHGCIIRLGFDDNK 372
QNG + + F Q+L+ +KP Q + +SV+ A + L L+L KQ+H I++ +
Sbjct: 393 QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS 452
Query: 373 FIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLED 432
F++++L+D Y++ +K A +F++ D+VAW A++ G + LF M +
Sbjct: 453 FVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQ 511
Query: 433 GVRPCYVAFMAVLTACSHAGLVDEG-----WKYFNSMEKDFRIAPG-LEHYAAVADLLGR 486
G R V C +++G + + + D ++ G L+ Y D+
Sbjct: 512 GERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDM--- 568
Query: 487 AGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLV 535
+ A+D I P W+T+++ C + E A V ++ L+
Sbjct: 569 -SAAQFAFDSIP----VPDDVAWTTMISGCIENGEEERAFHVFSQMRLM 612
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 138/299 (46%), Gaps = 38/299 (12%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G D DL+ ++ +++MY K ++ + + FD +P D
Sbjct: 547 GYDLDLWVSSGILDMYVKCGDMS------------------------AAQFAFDSIPVPD 582
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
V+W T+I+G +NG A + +M + PD FT++++ + + +G +IH
Sbjct: 583 DVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHA 642
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQ 320
A++ D F+G+SL+DMYAKC ++ + F + + +WN+++ G Q+G+ +
Sbjct: 643 NALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKE 702
Query: 321 GIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLG----KQLHGCIIRLGFDDNKFIAS 376
+ F+QM +KP +V+F V+ AC+H ++ + +HG G S
Sbjct: 703 TLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHG---DYGIKPEIEHYS 759
Query: 377 SLVDMYAKCGNIKMARYIFDKIETRDMVA----WTAIIMGCAMHGHALDAVSLFEKMLE 431
L D + G +K A + IE+ M A + ++ C + G + K+LE
Sbjct: 760 CLADALGRAGLVKQAENL---IESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLE 815
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 97/191 (50%), Gaps = 5/191 (2%)
Query: 251 DVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIA 310
D++ G H + + + F+ ++LI MY+KC + ++ R F +P RD +SWNSI+A
Sbjct: 54 DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILA 113
Query: 311 GCVQNGK-----FDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIR 365
Q+ + Q FR + + V +++ S ++ C H + + HG +
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACK 173
Query: 366 LGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSL 425
+G D ++F+A +LV++Y K G +K + +F+++ RD+V W ++ G +A+ L
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 426 FEKMLEDGVRP 436
G+ P
Sbjct: 234 SSAFHSSGLNP 244
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 13/183 (7%)
Query: 171 VFDENPQR-------GKGCKC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGM-----F 217
F+ENP+R KC + R+VFD MP RD+VSWN+++A AQ+
Sbjct: 67 TFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENI 126
Query: 218 REALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSL 277
++A + R + D + TLS +L + V HGYA + G DGD F+ +L
Sbjct: 127 QQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGAL 186
Query: 278 IDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQ 337
+++Y K +V+ F +PYRD + WN ++ ++ G ++ I + + P +
Sbjct: 187 VNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNE 246
Query: 338 VSF 340
++
Sbjct: 247 ITL 249
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 423 bits (1088), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/529 (39%), Positives = 325/529 (61%), Gaps = 2/529 (0%)
Query: 183 KC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
KC + ++VF + ++ V SWN +I G+AQ+ R +LD +M L PDSFT+ S
Sbjct: 442 KCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCS 501
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
+L ++ + G E+HG+ IR+ + D+F+ S++ +Y C + F + +
Sbjct: 502 LLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKS 561
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
+SWN++I G +QNG D+ +G FRQM+ ++ +S V AC+ L +L LG++ H
Sbjct: 562 LVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHA 621
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALD 421
++ +D+ FIA SL+DMYAK G+I + +F+ ++ + +W A+IMG +HG A +
Sbjct: 622 YALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKE 681
Query: 422 AVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVA 481
A+ LFE+M G P + F+ VLTAC+H+GL+ EG +Y + M+ F + P L+HYA V
Sbjct: 682 AIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVI 741
Query: 482 DLLGRAGRLEEAYDFIS-NMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENM 540
D+LGRAG+L++A ++ M + +W +LL++CR H+++E+ EKV K+ ++PE
Sbjct: 742 DMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKP 801
Query: 541 GAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYD 600
YVL+SN+Y+ +W+D K+R M L+K CSWIE+ KV +F+ G++ ++
Sbjct: 802 ENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFE 861
Query: 601 KINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXX 660
+I +IL ++ K GY DT V HD+ +E K + LR HSE+LA+ +
Sbjct: 862 EIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTI 921
Query: 661 RVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
RV KN+R+CVDCH A K ISK++ REIVVRDN RFHHF NG CSCGDYW
Sbjct: 922 RVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 191/398 (47%), Gaps = 38/398 (9%)
Query: 142 LDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDV 201
LD +L NALM+MY K C C I + + +F + ++V
Sbjct: 323 LDKELVLNNALMDMYSK-----------------------CGC-ITNAQMIFKMNNNKNV 358
Query: 202 VSWNTVIAGNAQNGMFREALDMVREM--GDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
VSWNT++ G + G D++R+M G + +K D T+ + +P+ + E+H
Sbjct: 359 VSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELH 418
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFD 319
Y+++ F + + ++ + YAKC + ++ R F+ + + SWN++I G Q+
Sbjct: 419 CYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPR 478
Query: 320 QGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLV 379
+ QM + + P + S++ AC+ L +L LGK++HG IIR + + F+ S++
Sbjct: 479 LSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVL 538
Query: 380 DMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYV 439
+Y CG + + +FD +E + +V+W +I G +G A+ +F +M+ G++ C +
Sbjct: 539 SLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGI 598
Query: 440 AFMAVLTACS-----HAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAY 494
+ M V ACS G + + +E D IA ++ D+ + G + ++
Sbjct: 599 SMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIA------CSLIDMYAKNGSITQSS 652
Query: 495 DFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKI 532
+ + + T S W+ ++ H + A K+ +++
Sbjct: 653 KVFNGLKEKSTAS-WNAMIMGYGIHGLAKEAIKLFEEM 689
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 164/347 (47%), Gaps = 30/347 (8%)
Query: 109 PTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGFGSA 168
P +P ++KA GL D++ NAL++ Y
Sbjct: 185 PDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFY------------ 232
Query: 169 NKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL----DMV 224
G + ++FD+MP R++VSWN++I + NG E+ +M+
Sbjct: 233 ------------GTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMM 280
Query: 225 REMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKC 284
E GD PD TL ++LP+ A ++ G +HG+A++ D ++ + ++L+DMY+KC
Sbjct: 281 EENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKC 340
Query: 285 NRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKA--KVKPMQVSFSS 342
+ ++ F + ++ +SWN+++ G G RQML VK +V+ +
Sbjct: 341 GCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILN 400
Query: 343 VIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRD 402
+P C H + L K+LH ++ F N+ +A++ V YAKCG++ A+ +F I ++
Sbjct: 401 AVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKT 460
Query: 403 MVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACS 449
+ +W A+I G A ++ +M G+ P ++L+ACS
Sbjct: 461 VNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 138/275 (50%), Gaps = 7/275 (2%)
Query: 187 DSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREM-GDDKLKPDSFTLSSILPI 245
D R VFD + ++++ WN VI+ ++N ++ E L+ EM L PD FT ++
Sbjct: 137 DDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKA 196
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISW 305
A DV G+ +HG ++ G DVF+G++L+ Y V +L+ F ++P R+ +SW
Sbjct: 197 CAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSW 256
Query: 306 NSIIAGCVQNGKFDQGIGFFRQMLK----AKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
NS+I NG ++ +M++ P + +V+P CA + LGK +HG
Sbjct: 257 NSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHG 316
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALD 421
++L D + ++L+DMY+KCG I A+ IF +++V+W ++ G + G
Sbjct: 317 WAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHG 376
Query: 422 AVSLFEKMLEDG--VRPCYVAFMAVLTACSHAGLV 454
+ +ML G V+ V + + C H +
Sbjct: 377 TFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 411
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 145/324 (44%), Gaps = 14/324 (4%)
Query: 208 IAGNAQNGMFREALDMVRE-MGDDKLKPDSF-----TLSSILPIFAEHVDVVKGMEIHGY 261
I+ + G ++ V+E +GDD+ D+F L +L + D+ G +IH
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 262 AIRHG-FDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQ 320
D + + +I MYA C + S F L ++ WN++I+ +N +D+
Sbjct: 110 VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDE 169
Query: 321 GIGFFRQMLKAK-VKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLV 379
+ F +M+ + P ++ VI ACA ++ + +G +HG +++ G ++ F+ ++LV
Sbjct: 170 VLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALV 229
Query: 380 DMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLED----GVR 435
Y G + A +FD + R++V+W ++I + +G + ++ L +M+E+
Sbjct: 230 SFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFM 289
Query: 436 PCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYD 495
P + VL C+ + G K + R+ L A+ D+ + G + A
Sbjct: 290 PDVATLVTVLPVCAREREIGLG-KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA-Q 347
Query: 496 FISNMGIQPTGSVWSTLLAACRAH 519
I M W+T++ A
Sbjct: 348 MIFKMNNNKNVVSWNTMVGGFSAE 371
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/609 (36%), Positives = 339/609 (55%), Gaps = 28/609 (4%)
Query: 101 AMRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQ 160
+M G SP FP +LK+ G + + + AL++MYCK
Sbjct: 43 SMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKC- 101
Query: 161 NLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREA 220
G A KVF+ENPQ + C +N +I+G N +A
Sbjct: 102 --GLVADARKVFEENPQSSQLSVC-------------------YNALISGYTANSKVTDA 140
Query: 221 LDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDM 280
M R M + + DS T+ ++P+ + G +HG ++ G D +V + +S I M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 281 YAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSF 340
Y KC VE R F +P + I+WN++I+G QNG + + QM + V P +
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 341 SSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIET 400
SV+ +CAHL A +G ++ + GF N F++++ + MYA+CGN+ AR +FD +
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320
Query: 401 RDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKY 460
+ +V+WTA+I MHG + LF+ M++ G+RP F+ VL+ACSH+GL D+G +
Sbjct: 321 KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 380
Query: 461 FNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHK 520
F +M++++++ PG EHY+ + DLLGRAGRL+EA +FI +M ++P G+VW LL AC+ HK
Sbjct: 381 FRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHK 440
Query: 521 SVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWI 580
+V++AE K++ +P N+G YVLMSNIYS +K + ++R+ MR + +K P S++
Sbjct: 441 NVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYV 500
Query: 581 EIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRT 640
E +VH FLAGD+SH ++++ L+ E E V++ + + E R
Sbjct: 501 EHKGRVHLFLAGDRSHEQTEEVHRMLD------ELETSVMELAGNMDCDRGEEVSSTTRE 554
Query: 641 HSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMN 700
HSERLAIAF VIKN+RVC DCH +K +SKIV R+ VVRD SRFH+F +
Sbjct: 555 HSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKD 614
Query: 701 GSCSCGDYW 709
G CSC DYW
Sbjct: 615 GVCSCKDYW 623
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 158/332 (47%), Gaps = 4/332 (1%)
Query: 204 WNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAI 263
WN + A +F E++ + R M PD+F+ IL A V G ++H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 264 RHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS--WNSIIAGCVQNGKFDQG 321
+ G + + F+ ++LI MY KC V + + F P +S +N++I+G N K
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 322 IGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDM 381
FR+M + V V+ ++P C L LG+ LHG ++ G D + +S + M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 382 YAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAF 441
Y KCG+++ R +FD++ + ++ W A+I G + +G A D + L+E+M GV P
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 442 MAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMG 501
++VL++C+H G G + +E + P + A + R G L +A M
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESN-GFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 502 IQPTGSVWSTLLAACRAHKSVELAEKVVDKIL 533
++ S W+ ++ H E+ + D ++
Sbjct: 320 VKSLVS-WTAMIGCYGMHGMGEIGLMLFDDMI 350
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 421 bits (1082), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/569 (40%), Positives = 337/569 (59%), Gaps = 25/569 (4%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
GL AN L+N Y K Q DS R+ F+ P +
Sbjct: 45 GLSLIPLVANNLINFYSKSQ-----------------------LPFDS-RRAFEDSPQKS 80
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
+W+++I+ AQN + +L+ +++M L+PD L S A G +H
Sbjct: 81 STTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHC 140
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQ 320
+++ G+D DVF+GSSL+DMYAKC + ++ + F +P R+ ++W+ ++ G Q G+ ++
Sbjct: 141 LSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEE 200
Query: 321 GIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVD 380
+ F++ L + SFSSVI CA+ T L LG+Q+HG I+ FD + F+ SSLV
Sbjct: 201 ALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVS 260
Query: 381 MYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVA 440
+Y+KCG + A +F+++ +++ W A++ A H H + LF++M G++P ++
Sbjct: 261 LYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFIT 320
Query: 441 FMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM 500
F+ VL ACSHAGLVDEG YF+ M K+ RI P +HYA++ D+LGRAGRL+EA + I+NM
Sbjct: 321 FLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNM 379
Query: 501 GIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAA 560
I PT SVW LL +C HK+ ELA DK+ + P + G ++ +SN Y+A R++DAA
Sbjct: 380 PIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAA 439
Query: 561 KLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVL 620
K R +R +G KK SW+E NKVHTF AG++ H +I E L L E+MEK GY+
Sbjct: 440 KARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIA 499
Query: 621 DTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFIS 680
DTS VL +VD + K +R HSERLAIAF RV+KN+RVC DCH AIKF+S
Sbjct: 500 DTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMS 559
Query: 681 KIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
R I+VRDN+RFH F +G CSC DYW
Sbjct: 560 VCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 151/281 (53%), Gaps = 6/281 (2%)
Query: 252 VVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAG 311
+KG+++HGY ++ G + ++LI+ Y+K S RAF P + + +W+SII+
Sbjct: 31 TIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISC 90
Query: 312 CVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDN 371
QN + F ++M+ ++P S +CA L+ ++G+ +H ++ G+D +
Sbjct: 91 FAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDAD 150
Query: 372 KFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLE 431
F+ SSLVDMYAKCG I AR +FD++ R++V W+ ++ G A G +A+ LF++ L
Sbjct: 151 VFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALF 210
Query: 432 DGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLE 491
+ + +F +V++ C+++ L++ G + + + +++ L + G E
Sbjct: 211 ENLAVNDYSFSSVISVCANSTLLELG-RQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 492 EAYDFISNMGIQPTGSVWSTLLAACRAH----KSVELAEKV 528
AY + + ++ G +W+ +L A H K +EL +++
Sbjct: 270 GAYQVFNEVPVKNLG-IWNAMLKAYAQHSHTQKVIELFKRM 309
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 155/334 (46%), Gaps = 27/334 (8%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M A + P H PS K+ G D D++ ++L++MY K
Sbjct: 107 MMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCG- 165
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
EI RK+FD MP R+VV+W+ ++ G AQ G EAL
Sbjct: 166 -----------------------EIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEAL 202
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMY 281
+ +E + L + ++ SS++ + A + G +IHG +I+ FD F+GSSL+ +Y
Sbjct: 203 WLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLY 262
Query: 282 AKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFS 341
+KC E + + F +P ++ WN+++ Q+ + I F++M + +KP ++F
Sbjct: 263 SKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFL 322
Query: 342 SVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDK--IE 399
+V+ AC+H ++ G+ + + +SLVDM + G ++ A + I+
Sbjct: 323 NVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPID 382
Query: 400 TRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDG 433
+ V W A++ C +H + A +K+ E G
Sbjct: 383 PTESV-WGALLTSCTVHKNTELAAFAADKVFELG 415
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 194/460 (42%), Positives = 297/460 (64%), Gaps = 1/460 (0%)
Query: 251 DVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIA 310
DV G IH IR GF +++ +SL+ +YA C V + + F +P +D ++WNS+I
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 62
Query: 311 GCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDD 370
G +NGK ++ + + +M +KP + S++ ACA + AL LGK++H +I++G
Sbjct: 63 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 122
Query: 371 NKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKML 430
N ++ L+D+YA+CG ++ A+ +FD++ ++ V+WT++I+G A++G +A+ LF+ M
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 431 E-DGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGR 489
+G+ PC + F+ +L ACSH G+V EG++YF M ++++I P +EH+ + DLL RAG+
Sbjct: 183 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 242
Query: 490 LEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNI 549
+++AY++I +M +QP +W TLL AC H +LAE +IL ++P + G YVL+SN+
Sbjct: 243 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNM 302
Query: 550 YSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNIL 609
Y++ +RW D K+R M G+KK P S +E+GN+VH FL GDKSHP D I L +
Sbjct: 303 YASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEM 362
Query: 610 LEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVC 669
++ EGYV S V DV++E K + + HSE++AIAF V+KN+RVC
Sbjct: 363 TGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVC 422
Query: 670 VDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
DCH AIK +SK+ REIVVRD SRFHHF NGSCSC DYW
Sbjct: 423 ADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 135/259 (52%), Gaps = 8/259 (3%)
Query: 164 GFGSANKVFDENPQRGKGCKC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALD 222
GFGS ++ +N C ++ S KVFD MP +D+V+WN+VI G A+NG EAL
Sbjct: 18 GFGSL--IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALA 75
Query: 223 MVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYA 282
+ EM +KPD FT+ S+L A+ + G +H Y I+ G ++ + L+D+YA
Sbjct: 76 LYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYA 135
Query: 283 KCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAK-VKPMQVSFS 341
+C RVE + F + ++++SW S+I G NG + I F+ M + + P +++F
Sbjct: 136 RCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFV 195
Query: 342 SVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIA--SSLVDMYAKCGNIKMA-RYIFDKI 398
++ AC+H + G + +R + I +VD+ A+ G +K A YI
Sbjct: 196 GILYACSHCGMVKEGFEYFR-RMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 254
Query: 399 ETRDMVAWTAIIMGCAMHG 417
++V W ++ C +HG
Sbjct: 255 MQPNVVIWRTLLGACTVHG 273
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/608 (34%), Positives = 330/608 (54%), Gaps = 24/608 (3%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M+ I P ++ +PS+LK + Y + L++MY K+
Sbjct: 481 MQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGK 540
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
L D+ + +DVVSW T+IAG Q +AL
Sbjct: 541 L------------------------DTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 576
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMY 281
R+M D ++ D L++ + A + +G +IH A GF D+ ++L+ +Y
Sbjct: 577 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 636
Query: 282 AKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFS 341
++C ++E S AF D I+WN++++G Q+G ++ + F +M + + +F
Sbjct: 637 SRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFG 696
Query: 342 SVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR 401
S + A + + GKQ+H I + G+D + ++L+ MYAKCG+I A F ++ T+
Sbjct: 697 SAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK 756
Query: 402 DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYF 461
+ V+W AII + HG +A+ F++M+ VRP +V + VL+ACSH GLVD+G YF
Sbjct: 757 NEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYF 816
Query: 462 NSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKS 521
SM ++ ++P EHY V D+L RAG L A +FI M I+P VW TLL+AC HK+
Sbjct: 817 ESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKN 876
Query: 522 VELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIE 581
+E+ E +L ++PE+ YVL+SN+Y+ +K+W R M+ KG+KK P SWIE
Sbjct: 877 MEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIE 936
Query: 582 IGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTH 641
+ N +H+F GD++HP D+I+E L ++ + GYV D +L+++ E K ++ H
Sbjct: 937 VKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIH 996
Query: 642 SERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNG 701
SE+LAI+F V+KN+RVC DCH IKF+SK+ REI+VRD RFHHF G
Sbjct: 997 SEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGG 1056
Query: 702 SCSCGDYW 709
+CSC DYW
Sbjct: 1057 ACSCKDYW 1064
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 183/393 (46%), Gaps = 25/393 (6%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M LGI PT + F S+L A G D Y NAL+++Y + N
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 338
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
L S +F M RD V++NT+I G +Q G +A+
Sbjct: 339 L------------------------ISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAM 374
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMY 281
++ + M D L+PDS TL+S++ + + +G ++H Y + GF + I +L+++Y
Sbjct: 375 ELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLY 434
Query: 282 AKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFS 341
AKC +E +L F + + WN ++ FRQM ++ P Q ++
Sbjct: 435 AKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYP 494
Query: 342 SVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR 401
S++ C L L LG+Q+H II+ F N ++ S L+DMYAK G + A I + +
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK 554
Query: 402 DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYF 461
D+V+WT +I G + A++ F +ML+ G+R V ++AC+ + EG +
Sbjct: 555 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG-QQI 613
Query: 462 NSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAY 494
++ + L A+ L R G++EE+Y
Sbjct: 614 HAQACVSGFSSDLPFQNALVTLYSRCGKIEESY 646
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 162/328 (49%), Gaps = 7/328 (2%)
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIF---A 247
KVFD MP R + +WN +I A + E + M + + P+ T S +L +
Sbjct: 141 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGS 200
Query: 248 EHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNS 307
DVV+ +IH + G + + LID+Y++ V+ + R F L +D SW +
Sbjct: 201 VAFDVVE--QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 308 IIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLG 367
+I+G +N + I F M + P +FSSV+ AC + +L +G+QLHG +++LG
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 368 FDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFE 427
F + ++ ++LV +Y GN+ A +IF + RD V + +I G + G+ A+ LF+
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 378
Query: 428 KMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRA 487
+M DG+ P +++ ACS G + G + ++ A + A+ +L +
Sbjct: 379 RMHLDGLEPDSNTLASLVVACSADGTLFRG-QQLHAYTTKLGFASNNKIEGALLNLYAKC 437
Query: 488 GRLEEAYDFISNMGIQPTGSVWSTLLAA 515
+E A D+ ++ +W+ +L A
Sbjct: 438 ADIETALDYFLETEVENV-VLWNVMLVA 464
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 146/295 (49%), Gaps = 3/295 (1%)
Query: 164 GFGSANKVFDENPQRGKGCKC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALD 222
GF S NK+ E KC +I++ F +VV WN ++ R +
Sbjct: 419 GFASNNKI--EGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 476
Query: 223 MVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYA 282
+ R+M +++ P+ +T SIL D+ G +IH I+ F + ++ S LIDMYA
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYA 536
Query: 283 KCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSS 342
K +++ + +D +SW ++IAG Q D+ + FRQML ++ +V ++
Sbjct: 537 KLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTN 596
Query: 343 VIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRD 402
+ ACA L AL G+Q+H GF + ++LV +Y++CG I+ + F++ E D
Sbjct: 597 AVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGD 656
Query: 403 MVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG 457
+AW A++ G G+ +A+ +F +M +G+ F + + A S + +G
Sbjct: 657 NIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQG 711
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 171/331 (51%), Gaps = 4/331 (1%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
+D R+VFD + +D SW +I+G ++N EA+ + +M + P + SS+L
Sbjct: 238 VDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSA 297
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISW 305
+ + G ++HG ++ GF D ++ ++L+ +Y + + F + RDA+++
Sbjct: 298 CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTY 357
Query: 306 NSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIR 365
N++I G Q G ++ + F++M ++P + +S++ AC+ L G+QLH +
Sbjct: 358 NTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTK 417
Query: 366 LGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSL 425
LGF N I +L+++YAKC +I+ A F + E ++V W +++ + ++ +
Sbjct: 418 LGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRI 477
Query: 426 FEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEK-DFRIAPGLEHYAAVADLL 484
F +M + + P + ++L C G ++ G + + + K +F++ + + + D+
Sbjct: 478 FRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV--CSVLIDMY 535
Query: 485 GRAGRLEEAYDFISNMGIQPTGSVWSTLLAA 515
+ G+L+ A+D + + S W+T++A
Sbjct: 536 AKLGKLDTAWDILIRFAGKDVVS-WTTMIAG 565
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 126/263 (47%), Gaps = 6/263 (2%)
Query: 189 VRKVFDLMPARDVVSWNTVIAGNAQNGMFREA-LDMVREMGDDKLKPDSFTLSSILP-IF 246
R VF + S+ + +++ F+E +D V G ++P+ TL +L
Sbjct: 39 TRTVFPTLCGTRRASFAAISVYISEDESFQEKRIDSVENRG---IRPNHQTLKWLLEGCL 95
Query: 247 AEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWN 306
+ + +G ++H ++ G D + + L D Y + + + F +P R +WN
Sbjct: 96 KTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWN 155
Query: 307 SIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPAC-AHLTALNLGKQLHGCIIR 365
+I + G F +M+ V P + +FS V+ AC A ++ +Q+H I+
Sbjct: 156 KMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILY 215
Query: 366 LGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSL 425
G D+ + + L+D+Y++ G + +AR +FD + +D +W A+I G + + +A+ L
Sbjct: 216 QGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRL 275
Query: 426 FEKMLEDGVRPCYVAFMAVLTAC 448
F M G+ P AF +VL+AC
Sbjct: 276 FCDMYVLGIMPTPYAFSSVLSAC 298
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/530 (38%), Positives = 315/530 (59%), Gaps = 3/530 (0%)
Query: 182 CKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
C C ++ RKV D MP ++VVSW +I+ +Q G EAL + EM KP+ FT ++
Sbjct: 100 CDC-LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFAT 158
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
+L + G +IHG ++ +D +F+GSSL+DMYAK +++ + F LP RD
Sbjct: 159 VLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERD 218
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
+S +IIAG Q G ++ + F ++ + P V+++S++ A + L L+ GKQ H
Sbjct: 219 VVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHC 278
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALD 421
++R + +SL+DMY+KCGN+ AR +FD + R ++W A+++G + HG +
Sbjct: 279 HVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGRE 338
Query: 422 AVSLFEKML-EDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSM-EKDFRIAPGLEHYAA 479
+ LF M E V+P V +AVL+ CSH + D G F+ M ++ PG EHY
Sbjct: 339 VLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGC 398
Query: 480 VADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPEN 539
+ D+LGRAGR++EA++FI M +PT V +LL ACR H SV++ E V +++ ++PEN
Sbjct: 399 IVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPEN 458
Query: 540 MGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYY 599
G YV++SN+Y++A RW D +R M K + K P SWI+ +H F A D++HP
Sbjct: 459 AGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRR 518
Query: 600 DKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXX 659
+++ + + +M++ GYV D S VL+DVD+E K +L HSE+LA+ F
Sbjct: 519 EEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIP 578
Query: 660 XRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
RV KN+R+CVDCH K SK+ RE+ +RD +RFH ++G CSCGDYW
Sbjct: 579 IRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 172/332 (51%), Gaps = 7/332 (2%)
Query: 189 VRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAE 248
+ + F P V+ I+ NG +EAL + +G + ++L +
Sbjct: 8 IHRSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEM---GFHGYDALLNACLD 64
Query: 249 HVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSI 308
+ G +H + I+ + ++ + L+ Y KC+ +E + + +P ++ +SW ++
Sbjct: 65 KRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAM 124
Query: 309 IAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGF 368
I+ Q G + + F +M+++ KP + +F++V+ +C + L LGKQ+HG I++ +
Sbjct: 125 ISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNY 184
Query: 369 DDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEK 428
D + F+ SSL+DMYAK G IK AR IF+ + RD+V+ TAII G A G +A+ +F +
Sbjct: 185 DSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHR 244
Query: 429 MLEDGVRPCYVAFMAVLTACSHAGLVDEGWK-YFNSMEKDFRIAPGLEHYAAVADLLGRA 487
+ +G+ P YV + ++LTA S L+D G + + + + ++ L++ ++ D+ +
Sbjct: 245 LHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN--SLIDMYSKC 302
Query: 488 GRLEEAYDFISNMGIQPTGSVWSTLLAACRAH 519
G L A NM + T W+ +L H
Sbjct: 303 GNLSYARRLFDNMP-ERTAISWNAMLVGYSKH 333
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/530 (38%), Positives = 324/530 (61%), Gaps = 6/530 (1%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSIL-P 244
+D RKVFD R + WN + G E L + +M ++ D FT + +L
Sbjct: 128 VDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKA 187
Query: 245 IFAEHVDV---VKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
A V +KG EIH + R G+ V+I ++L+DMYA+ V+++ F +P R+
Sbjct: 188 CVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRN 247
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAK--VKPMQVSFSSVIPACAHLTALNLGKQL 359
+SW+++IA +NGK + + FR+M++ P V+ SV+ ACA L AL GK +
Sbjct: 248 VVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLI 307
Query: 360 HGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHA 419
HG I+R G D + S+LV MY +CG +++ + +FD++ RD+V+W ++I +HG+
Sbjct: 308 HGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYG 367
Query: 420 LDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAA 479
A+ +FE+ML +G P V F++VL ACSH GLV+EG + F +M +D I P +EHYA
Sbjct: 368 KKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYAC 427
Query: 480 VADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPEN 539
+ DLLGRA RL+EA + +M +P VW +LL +CR H +VELAE+ ++ ++P+N
Sbjct: 428 MVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKN 487
Query: 540 MGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYY 599
G YVL+++IY+ A+ W + +++ + +GL+K P W+E+ K+++F++ D+ +P
Sbjct: 488 AGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLM 547
Query: 600 DKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXX 659
++I+ L L E M+++GY+ T VL++++ E K ++ HSE+LA+AF
Sbjct: 548 EQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEP 607
Query: 660 XRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
R+ KN+R+C DCH KFISK + +EI+VRD +RFH F NG CSCGDYW
Sbjct: 608 IRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 189/415 (45%), Gaps = 57/415 (13%)
Query: 202 VSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGY 261
+S N +I + G ++A+ ++ + + P T ++ + + +H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 262 AIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQG 321
+ +G D D F+ + LI MY+ V+++ + F R WN++ G ++
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 322 IGFFRQMLKAKVKPMQVSFSSVIPACA----HLTALNLGKQLHGCIIRLGFDDNKFIASS 377
+G + +M + V+ + +++ V+ AC + L GK++H + R G+ + +I ++
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 378 LVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDG--VR 435
LVDMYA+ G + A Y+F + R++V+W+A+I A +G A +A+ F +M+ +
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 282
Query: 436 PCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEH----YAAVADLLGRAGRLE 491
P V ++VL AC+ +++G + + + GL+ +A+ + GR G+LE
Sbjct: 283 PNSVTMVSVLQACASLAALEQG-----KLIHGYILRRGLDSILPVISALVTMYGRCGKLE 337
Query: 492 ---EAYD------------FISNMGIQ-------------------PTGSVWSTLLAACR 517
+D IS+ G+ PT + ++L AC
Sbjct: 338 VGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACS 397
Query: 518 AHKSVELAEKVVDKILL---VDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSK 569
VE +++ + + + P+ + Y M ++ A R +AAK+ MR++
Sbjct: 398 HEGLVEEGKRLFETMWRDHGIKPQ-IEHYACMVDLLGRANRLDEAAKMVQDMRTE 451
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/568 (38%), Positives = 327/568 (57%), Gaps = 14/568 (2%)
Query: 153 MNMYCKVQNLGGFGSANKVFDENPQR----------GKGCKCEIDSVRKVFDLMPARDVV 202
M+MY K LG F SA V+ ++ G ++ + RKVFD MP R +
Sbjct: 1 MSMYSK---LGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLT 57
Query: 203 SWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYA 262
+WN +IAG Q E L + REM PD +TL S+ A V G +IHGY
Sbjct: 58 TWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYT 117
Query: 263 IRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGI 322
I++G + D+ + SSL MY + +++ +P R+ ++WN++I G QNG + +
Sbjct: 118 IKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVL 177
Query: 323 GFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMY 382
++ M + +P +++F +V+ +C+ L G+Q+H I++G + SSL+ MY
Sbjct: 178 YLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMY 237
Query: 383 AKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLED-GVRPCYVAF 441
+KCG + A F + E D V W+++I HG +A+ LF M E + VAF
Sbjct: 238 SKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAF 297
Query: 442 MAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMG 501
+ +L ACSH+GL D+G + F+ M + + PGL+HY V DLLGRAG L++A I +M
Sbjct: 298 LNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMP 357
Query: 502 IQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAK 561
I+ +W TLL+AC HK+ E+A++V +IL +DP + YVL++N++++AKRW+D ++
Sbjct: 358 IKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSE 417
Query: 562 LRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLD 621
+R MR K +KK SW E +VH F GD+S +I L L +M+ +GY D
Sbjct: 418 VRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPD 477
Query: 622 TSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISK 681
T+ VLHD+D+E K L HSE+LA+AF R+IKN+RVC DCH A K+IS
Sbjct: 478 TASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISV 537
Query: 682 IVGREIVVRDNSRFHHFMNGSCSCGDYW 709
I REI +RD SRFHHF+NG CSCGDYW
Sbjct: 538 IKNREITLRDGSRFHHFINGKCSCGDYW 565
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/590 (37%), Positives = 347/590 (58%), Gaps = 24/590 (4%)
Query: 141 GLDFDLYTANALMNMYCKVQNL----------GGF---GSANKVFDENPQRGKGCKCEID 187
G + D +T + L+ C +L GGF S N F +G + +
Sbjct: 135 GFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLR---E 191
Query: 188 SVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFA 247
+V + + RD VSWN++I Q+ +AL + +EM K D FTL+S+L
Sbjct: 192 AVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALT 251
Query: 248 EHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVE---HSLRAFYLLPYRDAIS 304
++ G + HG I+ GF + +GS LID Y+KC + S + F + D +
Sbjct: 252 SLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVV 311
Query: 305 WNSIIAGCVQNGKF-DQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCI 363
WN++I+G N + ++ + FRQM + +P SF V AC++L++ + KQ+HG
Sbjct: 312 WNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLA 371
Query: 364 IRLGFDDNKF-IASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDA 422
I+ N+ + ++L+ +Y K GN++ AR++FD++ + V++ +I G A HGH +A
Sbjct: 372 IKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEA 431
Query: 423 VSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVAD 482
+ L+++ML+ G+ P + F+AVL+AC+H G VDEG +YFN+M++ F+I P EHY+ + D
Sbjct: 432 LLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMID 491
Query: 483 LLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGA 542
LLGRAG+LEEA FI M +P W+ LL ACR HK++ LAE+ ++++++ P
Sbjct: 492 LLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATP 551
Query: 543 YVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKI 602
YV+++N+Y+ A++W++ A +R MR K ++K P CSWIE+ K H F+A D SHP ++
Sbjct: 552 YVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREV 611
Query: 603 NEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDL---LRTHSERLAIAFXXXXXXXXXX 659
NE L ++++M+K GYV+D + D+ + D L HSE+LA+AF
Sbjct: 612 NEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEE 671
Query: 660 XRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
V+KN+R+C DCH AIKF+S + GREI+VRDN RFH F +G CSCGDYW
Sbjct: 672 LVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 135/317 (42%), Gaps = 47/317 (14%)
Query: 251 DVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYL-------------- 296
D+ G +H ++ ++ + +++Y+KC R+ ++ AFY
Sbjct: 23 DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVK 82
Query: 297 -----------------LPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVS 339
+P D +S+N++I+G + + F++M K + +
Sbjct: 83 AYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFT 142
Query: 340 FSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKI- 398
S +I AC ++L KQLH + GFD + ++ V Y+K G ++ A +F +
Sbjct: 143 LSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMD 200
Query: 399 ETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGW 458
E RD V+W ++I+ H A++L+++M+ G + +VL A + + G
Sbjct: 201 ELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGR 260
Query: 459 KYFNSMEKDFRIAPGLEHYAAVA----DLLGRAGRLEEAYDF--ISNMGIQPTGSVWSTL 512
++ + I G + V D + G + YD + + P VW+T+
Sbjct: 261 QFHGKL-----IKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTM 315
Query: 513 LAACRAHKSVELAEKVV 529
++ ++ EL+E+ V
Sbjct: 316 ISGYSMNE--ELSEEAV 330
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/526 (39%), Positives = 309/526 (58%), Gaps = 3/526 (0%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP 244
++D K+F MP ++V+SW T+I G QN EALD+ + M +K S + ++
Sbjct: 174 KVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVIT 233
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS 304
A G+++HG I+ GF + ++ +SLI YA C R+ S + F +
Sbjct: 234 ACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAV 293
Query: 305 WNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCII 364
W ++++G N K + + F ML+ + P Q +F+S + +C+ L L+ GK++HG +
Sbjct: 294 WTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAV 353
Query: 365 RLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVS 424
+LG + + F+ +SLV MY+ GN+ A +F KI + +V+W +II+GCA HG A
Sbjct: 354 KLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFV 413
Query: 425 LFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFR-IAPGLEHYAAVADL 483
+F +M+ P + F +L+ACSH G +++G K F M I ++HY + D+
Sbjct: 414 IFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDI 473
Query: 484 LGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAY 543
LGR G+L+EA + I M ++P VW LL+ACR H V+ EK I +D ++ AY
Sbjct: 474 LGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAY 533
Query: 544 VLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKIN 603
VL+SNIY++A RW + +KLR+ M+ G+ K P SW+ I K H F +GD+ P+ +I
Sbjct: 534 VLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--PHCSRIY 591
Query: 604 EALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVI 663
E L L E++++ GY D LHDV+DE K ++L HSERLAIAF V+
Sbjct: 592 EKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVM 651
Query: 664 KNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
KN+RVC DCHT IK IS +VGREIV+RD RFHHF NG+CSCGDYW
Sbjct: 652 KNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 178/351 (50%), Gaps = 18/351 (5%)
Query: 192 VFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVD 251
+FD MP RDVVSWN++I+G + G A+ + EM + + + ++ + VD
Sbjct: 88 LFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFR--SGKVD 145
Query: 252 VVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAG 311
+ + + ++ D +S++ Y + +V+ +L+ F +P ++ ISW ++I G
Sbjct: 146 QAERL-FYQMPVK-----DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICG 199
Query: 312 CVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDN 371
QN + + + F+ ML+ +K F+ VI ACA+ A ++G Q+HG II+LGF
Sbjct: 200 LDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYE 259
Query: 372 KFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLE 431
+++++SL+ YA C I +R +FD+ + WTA++ G +++ DA+S+F ML
Sbjct: 260 EYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLR 319
Query: 432 DGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLL----GRA 487
+ + P F + L +CS G +D G + + GLE A V + L +
Sbjct: 320 NSILPNQSTFASGLNSCSALGTLDWGKEMHG-----VAVKLGLETDAFVGNSLVVMYSDS 374
Query: 488 GRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPE 538
G + +A + + S W++++ C H + A + +++ ++ E
Sbjct: 375 GNVNDAVSVFIKIFKKSIVS-WNSIIVGCAQHGRGKWAFVIFGQMIRLNKE 424
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 97/181 (53%), Gaps = 8/181 (4%)
Query: 271 VFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLK 330
V + + +I Y + NR+ +L F +P RD +SWNS+I+GCV+ G + + F +M +
Sbjct: 66 VSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPE 125
Query: 331 AKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKM 390
V VS+++++ C ++ ++L ++ D +S+V Y + G +
Sbjct: 126 RSV----VSWTAMVNGCFRSGKVDQAERL---FYQMPVKDTA-AWNSMVHGYLQFGKVDD 177
Query: 391 ARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSH 450
A +F ++ +++++WT +I G + + +A+ LF+ ML ++ F V+TAC++
Sbjct: 178 ALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACAN 237
Query: 451 A 451
A
Sbjct: 238 A 238
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 414 bits (1063), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/611 (36%), Positives = 342/611 (55%), Gaps = 25/611 (4%)
Query: 100 NAMRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKV 159
+ MR G P + F + LKAS D L+ +Y +
Sbjct: 236 SCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQ- 294
Query: 160 QNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFRE 219
LG A KVF+E MP DVV W+ +IA QNG E
Sbjct: 295 --LGDMSDAFKVFNE---------------------MPKNDVVPWSFMIARFCQNGFCNE 331
Query: 220 ALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLID 279
A+D+ M + + P+ FTLSSIL A G ++HG ++ GFD D+++ ++LID
Sbjct: 332 AVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALID 391
Query: 280 MYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVS 339
+YAKC +++ +++ F L ++ +SWN++I G G+ + FR+ L+ +V +V+
Sbjct: 392 VYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVT 451
Query: 340 FSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIE 399
FSS + ACA L +++LG Q+HG I+ +++SL+DMYAKCG+IK A+ +F+++E
Sbjct: 452 FSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME 511
Query: 400 TRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWK 459
T D+ +W A+I G + HG A+ + + M + +P + F+ VL+ CS+AGL+D+G +
Sbjct: 512 TIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQE 571
Query: 460 YFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAH 519
F SM +D I P LEHY + LLGR+G+L++A I + +P+ +W +L+A
Sbjct: 572 CFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQ 631
Query: 520 KSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSW 579
+ E A + ++IL ++P++ YVL+SN+Y+ AK+W + A +R M+ G+KK P SW
Sbjct: 632 NNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSW 691
Query: 580 IEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLR 639
IE VH F G HP IN L L + + GYV D + VL D+DDE K L
Sbjct: 692 IEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLW 751
Query: 640 THSERLAIAFXXXXXXXXXXXRVI-KNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHF 698
HSERLA+A+ +I KN+R+C DCH+A+K IS IV R++V+RD +RFHHF
Sbjct: 752 VHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHF 811
Query: 699 MNGSCSCGDYW 709
G CSCGD+W
Sbjct: 812 HAGVCSCGDHW 822
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 176/347 (50%), Gaps = 6/347 (1%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSIL-- 243
+DS R VF+ + +D+V W +++ +NG F ++L ++ M P+++T + L
Sbjct: 197 VDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKA 256
Query: 244 PIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAI 303
I D KG +HG ++ + D +G L+ +Y + + + + F +P D +
Sbjct: 257 SIGLGAFDFAKG--VHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVV 314
Query: 304 SWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCI 363
W+ +IA QNG ++ + F +M +A V P + + SS++ CA LG+QLHG +
Sbjct: 315 PWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLV 374
Query: 364 IRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAV 423
+++GFD + +++++L+D+YAKC + A +F ++ +++ V+W +I+G G A
Sbjct: 375 VKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAF 434
Query: 424 SLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADL 483
S+F + L + V V F + L AC+ +D G + + + A + ++ D+
Sbjct: 435 SMFREALRNQVSVTEVTFSSALGACASLASMDLGVQ-VHGLAIKTNNAKKVAVSNSLIDM 493
Query: 484 LGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVD 530
+ G ++ A + M S W+ L++ H A +++D
Sbjct: 494 YAKCGDIKFAQSVFNEMETIDVAS-WNALISGYSTHGLGRQALRILD 539
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 136/306 (44%), Gaps = 28/306 (9%)
Query: 144 FDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVS 203
DL+ N L+N Y K FD++ +FD MP R+ VS
Sbjct: 82 LDLFATNILLNAYVKAG-----------FDKD-------------ALNLFDEMPERNNVS 117
Query: 204 WNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAI 263
+ T+ G A + RE +L P FT S L +F +H +
Sbjct: 118 FVTLAQGYACQDPIGLYSRLHRE--GHELNPHVFT--SFLKLFVSLDKAEICPWLHSPIV 173
Query: 264 RHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIG 323
+ G+D + F+G++LI+ Y+ C V+ + F + +D + W I++ V+NG F+ +
Sbjct: 174 KLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLK 233
Query: 324 FFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYA 383
M A P +F + + A L A + K +HG I++ + + + L+ +Y
Sbjct: 234 LLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYT 293
Query: 384 KCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMA 443
+ G++ A +F+++ D+V W+ +I +G +AV LF +M E V P +
Sbjct: 294 QLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSS 353
Query: 444 VLTACS 449
+L C+
Sbjct: 354 ILNGCA 359
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 158/382 (41%), Gaps = 52/382 (13%)
Query: 230 DKLKP--DSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRV 287
D + P DS ++L + D + IH ++ G D+F + L++ Y K
Sbjct: 41 DSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFD 100
Query: 288 EHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPAC 347
+ +L F +P R+ +S+ ++ Q IG + ++ + + F+S +
Sbjct: 101 KDALNLFDEMPERNNVSFVTL----AQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLF 156
Query: 348 AHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWT 407
L + LH I++LG+D N F+ ++L++ Y+ CG++ AR +F+ I +D+V W
Sbjct: 157 VSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWA 216
Query: 408 AIIMGCAMHGHALDAVSLFEKMLEDGVRP------------------------------- 436
I+ +G+ D++ L M G P
Sbjct: 217 GIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKT 276
Query: 437 CYV----AFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEE 492
CYV + +L + G + + +K FN M K+ + P ++ + + G E
Sbjct: 277 CYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKN-DVVP----WSFMIARFCQNGFCNE 331
Query: 493 AYDFISNMG---IQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYV--LMS 547
A D M + P S++L C K L E++ ++ V + + YV +
Sbjct: 332 AVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFD-LDIYVSNALI 390
Query: 548 NIYSAAKRWKDAAKLRIHMRSK 569
++Y+ ++ A KL + SK
Sbjct: 391 DVYAKCEKMDTAVKLFAELSSK 412
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/609 (36%), Positives = 335/609 (55%), Gaps = 24/609 (3%)
Query: 101 AMRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQ 160
++R G+ FP +LKA T G + D+ +L+++Y
Sbjct: 101 SIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIY---- 156
Query: 161 NLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREA 220
G G ++ K+FD +P R VV+W + +G +G REA
Sbjct: 157 -----------------SGSG---RLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREA 196
Query: 221 LDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDM 280
+D+ ++M + +KPDS+ + +L D+ G I Y + F+ ++L+++
Sbjct: 197 IDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNL 256
Query: 281 YAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSF 340
YAKC ++E + F + +D ++W+++I G N +GI F QML+ +KP Q S
Sbjct: 257 YAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSI 316
Query: 341 SSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIET 400
+ +CA L AL+LG+ I R F N F+A++L+DMYAKCG + +F +++
Sbjct: 317 VGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKE 376
Query: 401 RDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKY 460
+D+V A I G A +GH + ++F + + G+ P F+ +L C HAGL+ +G ++
Sbjct: 377 KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRF 436
Query: 461 FNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHK 520
FN++ + + +EHY + DL GRAG L++AY I +M ++P VW LL+ CR K
Sbjct: 437 FNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVK 496
Query: 521 SVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWI 580
+LAE V+ +++ ++P N G YV +SNIYS RW +AA++R M KG+KK P SWI
Sbjct: 497 DTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWI 556
Query: 581 EIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRT 640
E+ KVH FLA DKSHP DKI L L +M G+V T V DV++E K +L
Sbjct: 557 ELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGY 616
Query: 641 HSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMN 700
HSE+LA+A RV+KN+RVC DCH +K ISKI REIVVRDN+RFH F N
Sbjct: 617 HSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTN 676
Query: 701 GSCSCGDYW 709
GSCSC DYW
Sbjct: 677 GSCSCNDYW 685
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 153/301 (50%), Gaps = 1/301 (0%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
++ +N++I G N +F E LD+ + L FT +L G+++H
Sbjct: 75 NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLH 134
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFD 319
++ GF+ DV +SL+ +Y+ R+ + + F +P R ++W ++ +G +G+
Sbjct: 135 SLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHR 194
Query: 320 QGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLV 379
+ I F++M++ VKP V+ AC H+ L+ G+ + + + N F+ ++LV
Sbjct: 195 EAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLV 254
Query: 380 DMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYV 439
++YAKCG ++ AR +FD + +D+V W+ +I G A + + + LF +ML++ ++P
Sbjct: 255 NLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQF 314
Query: 440 AFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISN 499
+ + L++C+ G +D G ++ S+ L A+ D+ + G + ++
Sbjct: 315 SIVGFLSSCASLGALDLG-EWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKE 373
Query: 500 M 500
M
Sbjct: 374 M 374
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 138/287 (48%), Gaps = 11/287 (3%)
Query: 257 EIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNG 316
+IH I H D F+ + L+ + ++S F + + +NS+I G V N
Sbjct: 31 QIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNH 90
Query: 317 KFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIAS 376
F + + F + K + +F V+ AC ++ LG LH +++ GF+ + +
Sbjct: 91 LFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMT 150
Query: 377 SLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRP 436
SL+ +Y+ G + A +FD+I R +V WTA+ G G +A+ LF+KM+E GV+P
Sbjct: 151 SLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKP 210
Query: 437 CYVAFMAVLTACSHAGLVDEG-W--KYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEA 493
+ VL+AC H G +D G W KY ME + + +L + G++E+A
Sbjct: 211 DSYFIVQVLSACVHVGDLDSGEWIVKYMEEME----MQKNSFVRTTLVNLYAKCGKMEKA 266
Query: 494 YDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENM 540
+M ++ WST++ + + S ++ ++ L + EN+
Sbjct: 267 RSVFDSM-VEKDIVTWSTMI---QGYASNSFPKEGIELFLQMLQENL 309
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/573 (36%), Positives = 334/573 (58%), Gaps = 48/573 (8%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFRE--ALDMVREM-GDDKLKPDSFTLSS 241
++D K+F+ MP R+ SWNT+I G +++ + A+ + EM D+ ++P+ FT S
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYL----- 296
+L A+ + +G +IHG A+++GF GD F+ S+L+ MY C ++ + FY
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 297 ----------------------------------------LPYRDAISWNSIIAGCVQNG 316
+ R +SWN++I+G NG
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253
Query: 317 KFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIAS 376
F + FR+M K ++P V+ SV+PA + L +L LG+ LH G + + S
Sbjct: 254 FFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGS 313
Query: 377 SLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRP 436
+L+DMY+KCG I+ A ++F+++ +++ W+A+I G A+HG A DA+ F KM + GVRP
Sbjct: 314 ALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRP 373
Query: 437 CYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDF 496
VA++ +LTACSH GLV+EG +YF+ M + P +EHY + DLLGR+G L+EA +F
Sbjct: 374 SDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEF 433
Query: 497 ISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRW 556
I NM I+P +W LL ACR +VE+ ++V + ++ + P + GAYV +SN+Y++ W
Sbjct: 434 ILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNW 493
Query: 557 KDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKE 616
+ +++R+ M+ K ++K P CS I+I +H F+ D SHP +IN L + +++
Sbjct: 494 SEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLA 553
Query: 617 GYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAI 676
GY T++VL ++++E K ++L HSE++A AF R++KN+R+C DCH++I
Sbjct: 554 GYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSI 613
Query: 677 KFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
K ISK+ R+I VRD RFHHF +GSCSC DYW
Sbjct: 614 KLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 142/318 (44%), Gaps = 60/318 (18%)
Query: 257 EIHGYAIRHGFDGDVFIGSSLIDMYAKCN----RVEHSLRAFYLLPYRDAISWNSIIAGC 312
+IH I+ G D + ++ A + ++++ + F +P R+ SWN+II G
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 313 VQNGKFDQGIG---FFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFD 369
++ + I F+ M V+P + +F SV+ ACA + GKQ+HG ++ GF
Sbjct: 101 SESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFG 160
Query: 370 DNKFIASSLVDMYAKC-------------------------------------------- 385
++F+ S+LV MY C
Sbjct: 161 GDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMR 220
Query: 386 -GNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAV 444
G+ K AR +FDK+ R +V+W +I G +++G DAV +F +M + +RP YV ++V
Sbjct: 221 LGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSV 280
Query: 445 LTACSHAGLVDEG-WKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQ 503
L A S G ++ G W + + + RI L +A+ D+ + G +E+A +
Sbjct: 281 LPAISRLGSLELGEWLHLYAEDSGIRIDDVLG--SALIDMYSKCGIIEKAIHVFERL--- 335
Query: 504 PTGSV--WSTLLAACRAH 519
P +V WS ++ H
Sbjct: 336 PRENVITWSAMINGFAIH 353
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/553 (38%), Positives = 333/553 (60%), Gaps = 19/553 (3%)
Query: 168 ANKVFDENPQRGK-------GC---KCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMF 217
A+++FDE P+ C + + FD MP +D SWNT+I G A+ G
Sbjct: 112 AHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEM 171
Query: 218 REALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSL 277
+A RE+ ++ + + ++++ + E D+ K A G V +++
Sbjct: 172 EKA----RELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRG----VVAWTAM 223
Query: 278 IDMYAKCNRVEHSLRAFY-LLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPM 336
I Y K +VE + F + ++ ++WN++I+G V+N + + G+ FR ML+ ++P
Sbjct: 224 ITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPN 283
Query: 337 QVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFD 396
SS + C+ L+AL LG+Q+H + + ++ +SL+ MY KCG + A +F+
Sbjct: 284 SSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFE 343
Query: 397 KIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDE 456
++ +D+VAW A+I G A HG+A A+ LF +M+++ +RP ++ F+AVL AC+HAGLV+
Sbjct: 344 VMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNI 403
Query: 457 GWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAAC 516
G YF SM +D+++ P +HY + DLLGRAG+LEEA I +M +P +V+ TLL AC
Sbjct: 404 GMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGAC 463
Query: 517 RAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPA 576
R HK+VELAE +K+L ++ +N YV ++NIY++ RW+D A++R M+ + K P
Sbjct: 464 RVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPG 523
Query: 577 CSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRD 636
SWIEI NKVH F + D+ HP D I++ L L ++M+ GY + LH+V++E K
Sbjct: 524 YSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEK 583
Query: 637 LLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFH 696
LL HSE+LA+AF +V KN+R+C DCH AIKFIS+I REI+VRD +RFH
Sbjct: 584 LLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFH 643
Query: 697 HFMNGSCSCGDYW 709
HF +GSCSCGDYW
Sbjct: 644 HFKDGSCSCGDYW 656
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 28/215 (13%)
Query: 101 AMRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQ 160
AM GI P S L + L D+ +L++MYCK
Sbjct: 274 AMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCG 333
Query: 161 NLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREA 220
LG K+F++M +DVV+WN +I+G AQ+G +A
Sbjct: 334 ELG------------------------DAWKLFEVMKKKDVVAWNAMISGYAQHGNADKA 369
Query: 221 LDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVK-GMEIHGYAIR-HGFDGDVFIGSSLI 278
L + REM D+K++PD T ++L + H +V GM +R + + + ++
Sbjct: 370 LCLFREMIDNKIRPDWITFVAVL-LACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMV 428
Query: 279 DMYAKCNRVEHSLRAFYLLPYRD-AISWNSIIAGC 312
D+ + ++E +L+ +P+R A + +++ C
Sbjct: 429 DLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGAC 463
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 131/303 (43%), Gaps = 28/303 (9%)
Query: 277 LIDMYAKCNR---VEHSLRAFYLLPYRDAISWNSIIAGCVQN-GKFDQGIGFFRQMLKAK 332
L + A+C R ++ +LR F+ + ++ I+WNS++ G ++ + + F ++
Sbjct: 64 LNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEI---- 119
Query: 333 VKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMAR 392
P +FS I ++ +N K R+ F D ++++ YA+ G ++ AR
Sbjct: 120 --PEPDTFSYNIMLSCYVRNVNFEKA-QSFFDRMPFKDAA-SWNTMITGYARRGEMEKAR 175
Query: 393 YIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAG 452
+F + ++ V+W A+I G G A F+ GV VA+ A++T A
Sbjct: 176 ELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGV----VAWTAMITGYMKAK 231
Query: 453 LVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM---GIQPTGSVW 509
V+ +M KD + L + A+ R E+ M GI+P S
Sbjct: 232 KVELA----EAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGL 287
Query: 510 STLLAACRAHKSVELAE---KVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHM 566
S+ L C +++L ++V K L + ++ A + ++Y DA KL M
Sbjct: 288 SSALLGCSELSALQLGRQIHQIVSKSTLCN--DVTALTSLISMYCKCGELGDAWKLFEVM 345
Query: 567 RSK 569
+ K
Sbjct: 346 KKK 348
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 410 bits (1053), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/522 (38%), Positives = 318/522 (60%), Gaps = 3/522 (0%)
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREM--GDDKLKPDSFTLSSILPIFAE 248
K+FD MP RD+VSWN++I+G + G + +++ M + +P+ T S++
Sbjct: 87 KLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVY 146
Query: 249 HVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSI 308
+G IHG ++ G +V + ++ I+ Y K + S + F L ++ +SWN++
Sbjct: 147 GGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTM 206
Query: 309 IAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGF 368
I +QNG ++G+ +F + +P Q +F +V+ +C + + L + +HG I+ GF
Sbjct: 207 IVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGF 266
Query: 369 DDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEK 428
NK I ++L+D+Y+K G ++ + +F +I + D +AWTA++ A HG DA+ FE
Sbjct: 267 SGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFEL 326
Query: 429 MLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAG 488
M+ G+ P +V F +L ACSH+GLV+EG YF +M K +RI P L+HY+ + DLLGR+G
Sbjct: 327 MVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSG 386
Query: 489 RLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSN 548
L++AY I M ++P+ VW LL ACR +K +L K +++ ++P + YV++SN
Sbjct: 387 LLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSN 446
Query: 549 IYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNI 608
IYSA+ WKDA+++R M+ KGL + CS+IE GNK+H F+ GD SHP +KI + L
Sbjct: 447 IYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKE 506
Query: 609 LLEQMEKE-GYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIR 667
+ ++M+ E GY T VLHDV ++ K +++ HSE++A+AF + KN+R
Sbjct: 507 IRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLR 566
Query: 668 VCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
+C DCH K IS I R I++RD+ RFHHF++GSCSC DYW
Sbjct: 567 ICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 131/281 (46%), Gaps = 30/281 (10%)
Query: 249 HVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSL---RAFYLLPYRDAISW 305
H VVK + + RHGF GD +G L R+ H + + F +P RD +SW
Sbjct: 54 HCKVVKSV-----SYRHGFIGDQLVGCYL--------RLGHDVCAEKLFDEMPERDLVSW 100
Query: 306 NSIIAGCVQNGKFDQGIGFFRQMLKAKV--KPMQVSFSSVIPACAHLTALNLGKQLHGCI 363
NS+I+G G + +M+ ++V +P +V+F S+I AC + + G+ +HG +
Sbjct: 101 NSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLV 160
Query: 364 IRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAV 423
++ G + + ++ ++ Y K G++ + +F+ + +++V+W +I+ +G A +
Sbjct: 161 MKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGL 220
Query: 424 SLFEKMLEDGVRPCYVAFMAVLTACSHAGLVD-----EGWKYFNSMEKDFRIAPGLEHYA 478
+ F G P F+AVL +C G+V G F + I
Sbjct: 221 AYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCIT------T 274
Query: 479 AVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAH 519
A+ DL + GRLE++ + P W+ +LAA H
Sbjct: 275 ALLDLYSKLGRLEDSSTVFHEI-TSPDSMAWTAMLAAYATH 314
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 124/253 (49%), Gaps = 10/253 (3%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL---DMVREMGDDKLKPDSFTLSS 241
++ S K+F+ + +++VSWNT+I + QNG+ + L +M R +G + PD T +
Sbjct: 184 DLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE---PDQATFLA 240
Query: 242 ILPIFAEHVDVVK-GMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR 300
+L E + VV+ IHG + GF G+ I ++L+D+Y+K R+E S F+ +
Sbjct: 241 VLRS-CEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSP 299
Query: 301 DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLH 360
D+++W +++A +G I F M+ + P V+F+ ++ AC+H + GK
Sbjct: 300 DSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYF 359
Query: 361 GCII-RLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVA-WTAIIMGCAMHGH 418
+ R D S +VD+ + G ++ A + ++ W A++ C ++
Sbjct: 360 ETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKD 419
Query: 419 ALDAVSLFEKMLE 431
E++ E
Sbjct: 420 TQLGTKAAERLFE 432
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 7/197 (3%)
Query: 333 VKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMAR 392
V + + SS+I A ++ L + LH +++ + FI LV Y + G+ A
Sbjct: 27 VHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAE 86
Query: 393 YIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKML--EDGVRPCYVAFMAVLTACSH 450
+FD++ RD+V+W ++I G + G+ + +M+ E G RP V F+++++AC +
Sbjct: 87 KLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVY 146
Query: 451 AGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWS 510
G +EG + + + F + ++ A + G+ G L + ++ I+ S W+
Sbjct: 147 GGSKEEG-RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVS-WN 204
Query: 511 TLLAACRAHKSVELAEK 527
T++ H LAEK
Sbjct: 205 TMIV---IHLQNGLAEK 218
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 408 bits (1048), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/570 (36%), Positives = 322/570 (56%), Gaps = 25/570 (4%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
GL ++ NAL++MY K+ E+ R+V MP RD
Sbjct: 392 GLFYNQIIGNALVSMYGKIG------------------------EMSESRRVLLQMPRRD 427
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVV-KGMEIH 259
VV+WN +I G A++ +AL + M + + + T+ S+L D++ +G +H
Sbjct: 428 VVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLH 487
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFD 319
Y + GF+ D + +SLI MYAKC + S F L R+ I+WN+++A +G +
Sbjct: 488 AYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGE 547
Query: 320 QGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLV 379
+ + +M V Q SFS + A A L L G+QLHG ++LGF+ + FI ++
Sbjct: 548 EVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAA 607
Query: 380 DMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYV 439
DMY+KCG I + R + +W +I HG+ + + F +MLE G++P +V
Sbjct: 608 DMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHV 667
Query: 440 AFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISN 499
F+++LTACSH GLVD+G Y++ + +DF + P +EH V DLLGR+GRL EA FIS
Sbjct: 668 TFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISK 727
Query: 500 MGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDA 559
M ++P VW +LLA+C+ H +++ K + + ++PE+ YVL SN+++ RW+D
Sbjct: 728 MPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDV 787
Query: 560 AKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYV 619
+R M K +KK ACSW+++ +KV +F GD++HP +I L + + +++ GYV
Sbjct: 788 ENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYV 847
Query: 620 LDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFI 679
DTS+ L D D+E K L HSERLA+A+ R+ KN+R+C DCH+ KF+
Sbjct: 848 ADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFV 907
Query: 680 SKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
S+++GR IV+RD RFHHF G CSC DYW
Sbjct: 908 SRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 177/357 (49%), Gaps = 11/357 (3%)
Query: 181 GCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLS 240
G +D +FD M RD +SWN++ A AQNG E+ + M + +S T+S
Sbjct: 206 GSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVS 265
Query: 241 SILPIFAEHVDVVK-GMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPY 299
++L + HVD K G IHG ++ GFD V + ++L+ MYA R + F +P
Sbjct: 266 TLLSVLG-HVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT 324
Query: 300 RDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQL 359
+D ISWNS++A V +G+ +G M+ + V+F+S + AC G+ L
Sbjct: 325 KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRIL 384
Query: 360 HGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHA 419
HG ++ G N+ I ++LV MY K G + +R + ++ RD+VAW A+I G A
Sbjct: 385 HGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDP 444
Query: 420 LDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAA 479
A++ F+ M +GV Y+ ++VL+AC G + E K ++ + ++ G E
Sbjct: 445 DKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHA----YIVSAGFESDEH 500
Query: 480 VADLL----GRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKI 532
V + L + G L + D + + + W+ +LAA H E K+V K+
Sbjct: 501 VKNSLITMYAKCGDLSSSQDLFNGLDNRNI-ITWNAMLAANAHHGHGEEVLKLVSKM 556
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 137/245 (55%), Gaps = 1/245 (0%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
+ R +FD+MP R+ VSWNT+++G + G++ E ++ R+M D +KP SF ++S++
Sbjct: 8 VKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTA 67
Query: 246 FAEHVDVVK-GMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS 304
+ + G+++HG+ + G DV++ ++++ +Y V S + F +P R+ +S
Sbjct: 68 CGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVS 127
Query: 305 WNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCII 364
W S++ G G+ ++ I ++ M V + S S VI +C L +LG+Q+ G ++
Sbjct: 128 WTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVV 187
Query: 365 RLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVS 424
+ G + + +SL+ M GN+ A YIFD++ RD ++W +I A +GH ++
Sbjct: 188 KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFR 247
Query: 425 LFEKM 429
+F M
Sbjct: 248 IFSLM 252
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 159/354 (44%), Gaps = 25/354 (7%)
Query: 105 LGISPTRHFFPSLLKA-STXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLG 163
LGI P+ SL+ A GL D+Y + A++++Y
Sbjct: 52 LGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLY------- 104
Query: 164 GFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDM 223
G + RKVF+ MP R+VVSW +++ G + G E +D+
Sbjct: 105 -----------------GVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDI 147
Query: 224 VREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAK 283
+ M + + + ++S ++ D G +I G ++ G + + + +SLI M
Sbjct: 148 YKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGS 207
Query: 284 CNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSV 343
V+++ F + RD ISWNSI A QNG ++ F M + + + S++
Sbjct: 208 MGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTL 267
Query: 344 IPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDM 403
+ H+ G+ +HG ++++GFD + ++L+ MYA G A +F ++ T+D+
Sbjct: 268 LSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDL 327
Query: 404 VAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG 457
++W +++ G +LDA+ L M+ G YV F + L AC ++G
Sbjct: 328 ISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG 381
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 134/251 (53%), Gaps = 15/251 (5%)
Query: 280 MYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVS 339
MY K RV+ + F ++P R+ +SWN++++G V+ G + +G+ FFR+M +KP
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 340 FSSVIPACAHLTAL-NLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKI 398
+S++ AC ++ G Q+HG + + G + +++++++ +Y G + +R +F+++
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 399 ETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDE-- 456
R++V+WT++++G + G + + +++ M +GV + V+++C L DE
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGL--LKDESL 178
Query: 457 GWKYFNSMEKDFRIAPGLEHYAAVAD----LLGRAGRLEEAYDFISNMGIQPTGSVWSTL 512
G + + K GLE AV + +LG G ++ A M + T S W+++
Sbjct: 179 GRQIIGQVVKS-----GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS-WNSI 232
Query: 513 LAACRAHKSVE 523
AA + +E
Sbjct: 233 AAAYAQNGHIE 243
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 407 bits (1045), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/610 (35%), Positives = 327/610 (53%), Gaps = 26/610 (4%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
MR G+ P FP KA G D++ + +MYCK +
Sbjct: 99 MRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRL 158
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
D RK+FD +P R++ +WN I+ + +G REA+
Sbjct: 159 R------------------------DDARKLFDEIPERNLETWNAFISNSVTDGRPREAI 194
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMY 281
+ E P+S T + L ++ + + GM++HG +R GFD DV + + LID Y
Sbjct: 195 EAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFY 254
Query: 282 AKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFS 341
KC ++ S F + ++A+SW S++A VQN + ++ + + K V+ S
Sbjct: 255 GKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMIS 314
Query: 342 SVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR 401
SV+ ACA + L LG+ +H ++ + F+ S+LVDMY KCG I+ + FD++ +
Sbjct: 315 SVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK 374
Query: 402 DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPC--YVAFMAVLTACSHAGLVDEGWK 459
++V ++I G A G A++LFE+M G P Y+ F+++L+ACS AG V+ G K
Sbjct: 375 NLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMK 434
Query: 460 YFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAH 519
F+SM + I PG EHY+ + D+LGRAG +E AY+FI M IQPT SVW L ACR H
Sbjct: 435 IFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMH 494
Query: 520 KSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSW 579
+L + + +DP++ G +VL+SN ++AA RW +A +R ++ G+KK SW
Sbjct: 495 GKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSW 554
Query: 580 IEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLR 639
I + N+VH F A D+SH +I L L +ME GY D L+D+++E K +
Sbjct: 555 ITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVS 614
Query: 640 THSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFM 699
HSE+LA+AF R+ KN+R+C DCH+ KF+S V REI+VRDN+RFH F
Sbjct: 615 HHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFK 674
Query: 700 NGSCSCGDYW 709
+G CSC DYW
Sbjct: 675 DGICSCKDYW 684
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 155/308 (50%), Gaps = 25/308 (8%)
Query: 147 YTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNT 206
+ AN L+NMY K+ ++P+ S R V L PAR+VVSW +
Sbjct: 43 FLANYLINMYSKL--------------DHPE----------SARLVLRLTPARNVVSWTS 78
Query: 207 VIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHG 266
+I+G AQNG F AL EM + + P+ FT A V G +IH A++ G
Sbjct: 79 LISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCG 138
Query: 267 FDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFR 326
DVF+G S DMY K + + + F +P R+ +WN+ I+ V +G+ + I F
Sbjct: 139 RILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFI 198
Query: 327 QMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCG 386
+ + P ++F + + AC+ LNLG QLHG ++R GFD + + + L+D Y KC
Sbjct: 199 EFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCK 258
Query: 387 NIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLT 446
I+ + IF ++ T++ V+W +++ + A L+ + +D V +VL+
Sbjct: 259 QIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLS 318
Query: 447 ACS-HAGL 453
AC+ AGL
Sbjct: 319 ACAGMAGL 326
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/579 (37%), Positives = 329/579 (56%), Gaps = 54/579 (9%)
Query: 143 DFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQR----------GKGCKCEIDSVRKV 192
D D ++++ CK G A ++FDE +R G G +D RK+
Sbjct: 169 DKDNIARTSMIHGLCKE---GRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKI 225
Query: 193 FDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDV 252
FD+MP + VSW +++ G QNG +A ++ F + + P+ A + +
Sbjct: 226 FDVMPEKTEVSWTSMLMGYVQNGRIEDAEEL-------------FEVMPVKPVIACNA-M 271
Query: 253 VKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGC 312
+ G+ G G++ AK RV S++ R+ SW ++I
Sbjct: 272 ISGL---------GQKGEI----------AKARRVFDSMKE------RNDASWQTVIKIH 306
Query: 313 VQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNK 372
+NG + + F M K V+P + S++ CA L +L+ GKQ+H ++R FD +
Sbjct: 307 ERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDV 366
Query: 373 FIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM-LE 431
++AS L+ MY KCG + ++ IFD+ ++D++ W +II G A HG +A+ +F +M L
Sbjct: 367 YVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLS 426
Query: 432 DGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLE 491
+P V F+A L+ACS+AG+V+EG K + SME F + P HYA + D+LGRAGR
Sbjct: 427 GSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFN 486
Query: 492 EAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYS 551
EA + I +M ++P +VW +LL ACR H +++AE K++ ++PEN G Y+L+SN+Y+
Sbjct: 487 EAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYA 546
Query: 552 AAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGD-KSHPYYDKINEALNILL 610
+ RW D A+LR M+++ ++K+P CSW E+ NKVH F G SHP + I + L+ L
Sbjct: 547 SQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELD 606
Query: 611 EQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCV 670
+ + GY D S LHDVD+E K + L+ HSERLA+A+ RV+KN+RVC
Sbjct: 607 GLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCS 666
Query: 671 DCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
DCHTAIK ISK+ REI++RD +RFHHF NG CSC DYW
Sbjct: 667 DCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 137/326 (42%), Gaps = 78/326 (23%)
Query: 168 ANKVFDENPQR----------GKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMF 217
A K+FDE P R G EID RKVFDLMP R+VVSW ++ G NG
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKV 126
Query: 218 REALDMVREMGD---------------DKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYA 262
A + +M + D D+ L ++P + ++ + IHG
Sbjct: 127 DVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIP---DKDNIARTSMIHGLC 183
Query: 263 -------IRHGFDG----DVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAG 311
R FD V ++++ Y + NRV+ + + F ++P + +SW S++ G
Sbjct: 184 KEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMG 243
Query: 312 CVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDN 371
VQNG+ + F M VKP + AC + + LG++
Sbjct: 244 YVQNGRIEDAEELFEVM---PVKP--------VIACNAMIS-GLGQK------------- 278
Query: 372 KFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLE 431
G I AR +FD ++ R+ +W +I +G L+A+ LF M +
Sbjct: 279 --------------GEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQK 324
Query: 432 DGVRPCYVAFMAVLTACSHAGLVDEG 457
GVRP + +++L+ C+ + G
Sbjct: 325 QGVRPTFPTLISILSVCASLASLHHG 350
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 156/370 (42%), Gaps = 74/370 (20%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP 244
+I RK+FD ++ + SWN+++AG N M R+A + EM PD +S
Sbjct: 32 KIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------PDRNIIS---- 81
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS 304
++G L+ Y K ++ + + F L+P R+ +S
Sbjct: 82 ----------------------WNG-------LVSGYMKNGEIDEARKVFDLMPERNVVS 112
Query: 305 WNSIIAGCVQNGKFDQGIGFFRQML---KAKVKPMQVSF---SSVIPACAHLTAL----N 354
W +++ G V NGK D F +M K M + F + AC + N
Sbjct: 113 WTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDN 172
Query: 355 LGKQ--LHGCIIRLGFDDNKFI-----------ASSLVDMYAKCGNIKMARYIFDKIETR 401
+ + +HG D+ + I +++V Y + + AR IFD + +
Sbjct: 173 IARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK 232
Query: 402 DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYF 461
V+WT+++MG +G DA LFE M V+P +A A+++ G + + + F
Sbjct: 233 TEVSWTSMLMGYVQNGRIEDAEELFEVM---PVKPV-IACNAMISGLGQKGEIAKARRVF 288
Query: 462 NSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYD---FISNMGIQPTGSVWSTLLAACRA 518
+SM++ + + V + R G EA D + G++PT ++L+ C +
Sbjct: 289 DSMKERNDAS-----WQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCAS 343
Query: 519 HKSVELAEKV 528
S+ ++V
Sbjct: 344 LASLHHGKQV 353
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 15/195 (7%)
Query: 369 DDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEK 428
D N + LV Y K G I AR +FD + R++V+WTA++ G +G A SLF K
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK 135
Query: 429 MLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAG 488
M E V++ +L G +D+ K + + IA ++ L + G
Sbjct: 136 MPEKN----KVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIA-----RTSMIHGLCKEG 186
Query: 489 RLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMG-AYVLMS 547
R++EA + M + + W+T++ + V+ A K+ D V PE ++ M
Sbjct: 187 RVDEAREIFDEMS-ERSVITWTTMVTGYGQNNRVDDARKIFD----VMPEKTEVSWTSML 241
Query: 548 NIYSAAKRWKDAAKL 562
Y R +DA +L
Sbjct: 242 MGYVQNGRIEDAEEL 256
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 86/222 (38%), Gaps = 29/222 (13%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M+ G+ PT S+L D D+Y A+ LM MY K
Sbjct: 322 MQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCG- 380
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
E+ + +FD P++D++ WN++I+G A +G+ EAL
Sbjct: 381 -----------------------ELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEAL 417
Query: 222 DMVREMG-DDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIG--SSLI 278
+ EM KP+ T + L + V +G++I+ ++ F + ++
Sbjct: 418 KVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIY-ESMESVFGVKPITAHYACMV 476
Query: 279 DMYAKCNRVEHSLRAFYLLPYR-DAISWNSIIAGCVQNGKFD 319
DM + R ++ + DA W S++ C + + D
Sbjct: 477 DMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLD 518
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/560 (38%), Positives = 327/560 (58%), Gaps = 33/560 (5%)
Query: 183 KCE-IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
KC ID +++FD A ++ N + + + G+ REAL + M D ++PD ++ S
Sbjct: 283 KCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLS 342
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLR--------- 292
+ ++ +++ G HGY +R+GF+ I ++LIDMY KC+R + + R
Sbjct: 343 AISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT 402
Query: 293 ----------------------AFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLK 330
F +P ++ +SWN+II+G VQ F++ I F M
Sbjct: 403 VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQS 462
Query: 331 AK-VKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIK 389
+ V V+ S+ AC HL AL+L K ++ I + G + + ++LVDM+++CG+ +
Sbjct: 463 QEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPE 522
Query: 390 MARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACS 449
A IF+ + RD+ AWTA I AM G+A A+ LF+ M+E G++P VAF+ LTACS
Sbjct: 523 SAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACS 582
Query: 450 HAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVW 509
H GLV +G + F SM K ++P HY + DLLGRAG LEEA I +M ++P +W
Sbjct: 583 HGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIW 642
Query: 510 STLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSK 569
++LLAACR +VE+A +KI ++ PE G+YVL+SN+Y++A RW D AK+R+ M+ K
Sbjct: 643 NSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEK 702
Query: 570 GLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDV 629
GL+K P S I+I K H F +GD+SHP I L+ + ++ G+V D S VL DV
Sbjct: 703 GLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDV 762
Query: 630 DDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVV 689
D++ K +L HSE+LA+A+ R++KN+RVC DCH+ KF SK+ REI++
Sbjct: 763 DEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIIL 822
Query: 690 RDNSRFHHFMNGSCSCGDYW 709
RDN+RFH+ G CSCGD+W
Sbjct: 823 RDNNRFHYIRQGKCSCGDFW 842
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 150/311 (48%), Gaps = 21/311 (6%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
GLD D+ T L+ C++ A +VF+ + G
Sbjct: 59 GLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT-------------------- 98
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
+N++I G A +G+ EA+ + M + + PD +T L A+ G++IHG
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQ 320
++ G+ D+F+ +SL+ YA+C ++ + + F + R+ +SW S+I G +
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 321 GIG-FFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLV 379
+ FFR + +V P V+ VI ACA L L G++++ I G + N + S+LV
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278
Query: 380 DMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYV 439
DMY KC I +A+ +FD+ ++ A+ G +A+ +F M++ GVRP +
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 440 AFMAVLTACSH 450
+ ++ +++CS
Sbjct: 339 SMLSAISSCSQ 349
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 159/341 (46%), Gaps = 24/341 (7%)
Query: 150 NALMNMYCKVQNLGGFGSANKVFDENPQR----------GKGCKCEIDSVRKVFDLMPAR 199
NAL++MY K +A ++FD + G E+D+ + F+ MP +
Sbjct: 376 NALIDMYMKCHRQD---TAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEK 432
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREM-GDDKLKPDSFTLSSILPIFAEHVDVVKGMEI 258
++VSWNT+I+G Q +F EA+++ M + + D T+ SI + I
Sbjct: 433 NIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWI 492
Query: 259 HGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKF 318
+ Y ++G DV +G++L+DM+++C E ++ F L RD +W + I G
Sbjct: 493 YYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNA 552
Query: 319 DQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRL-GFDDNKFIASS 377
++ I F M++ +KP V+F + AC+H + GK++ +++L G
Sbjct: 553 ERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGC 612
Query: 378 LVDMYAKCGNIKMARYIFD--KIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM--LEDG 433
+VD+ + G ++ A + + +E D++ W +++ C + G+ A EK+ L
Sbjct: 613 MVDLLGRAGLLEEAVQLIEDMPMEPNDVI-WNSLLAACRVQGNVEMAAYAAEKIQVLAPE 671
Query: 434 VRPCYVAFMAVLTACSHAGLVDEGWKYFNSM-EKDFRIAPG 473
YV V + AG ++ K SM EK R PG
Sbjct: 672 RTGSYVLLSNVYAS---AGRWNDMAKVRLSMKEKGLRKPPG 709
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 108/208 (51%), Gaps = 5/208 (2%)
Query: 259 HGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLL----PYRDAISWNSIIAGCVQ 314
H + G D DV + L+ + E A + Y +NS+I G
Sbjct: 52 HRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYAS 111
Query: 315 NGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFI 374
+G ++ I F +M+ + + P + +F + ACA A G Q+HG I+++G+ + F+
Sbjct: 112 SGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFV 171
Query: 375 ASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLED-G 433
+SLV YA+CG + AR +FD++ R++V+WT++I G A A DAV LF +M+ D
Sbjct: 172 QNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEE 231
Query: 434 VRPCYVAFMAVLTACSHAGLVDEGWKYF 461
V P V + V++AC+ ++ G K +
Sbjct: 232 VTPNSVTMVCVISACAKLEDLETGEKVY 259
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/522 (38%), Positives = 311/522 (59%), Gaps = 2/522 (0%)
Query: 190 RKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEH 249
R+VFD M + WNT+ G +N + E+L + ++M D ++PD FT ++ ++
Sbjct: 63 RQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQL 122
Query: 250 VDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSII 309
D G +H + +++GF + + L+ MY K + + F + +D ++WN+ +
Sbjct: 123 GDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFL 182
Query: 310 AGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFD 369
A CVQ G + +F +M V+ + S++ AC L +L +G++++ + D
Sbjct: 183 AVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEID 242
Query: 370 DNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM 429
N + ++ +DM+ KCGN + AR +F++++ R++V+W+ +I+G AM+G + +A++LF M
Sbjct: 243 CNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTM 302
Query: 430 LEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSM--EKDFRIAPGLEHYAAVADLLGRA 487
+G+RP YV F+ VL+ACSHAGLV+EG +YF+ M D + P EHYA + DLLGR+
Sbjct: 303 QNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRS 362
Query: 488 GRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMS 547
G LEEAY+FI M ++P +W LL AC H+ + L +KV D ++ P+ +VL+S
Sbjct: 363 GLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLS 422
Query: 548 NIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALN 607
NIY+AA +W K+R MR G KK A S +E K+H F GDKSHP I E L+
Sbjct: 423 NIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLD 482
Query: 608 ILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIR 667
+L+++ K GYV DT V HDV+ E K L HSE+LAIAF RV+KN+R
Sbjct: 483 EILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLR 542
Query: 668 VCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
C DCH KF+S + EI++RD +RFHHF NG CSC ++W
Sbjct: 543 TCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 139/319 (43%), Gaps = 28/319 (8%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
MR LG+ P +P ++KA + G A L+ MY K
Sbjct: 100 MRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMK--- 156
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
FG E+ S +F+ M +D+V+WN +A Q G AL
Sbjct: 157 ---FG------------------ELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIAL 195
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMY 281
+ +M D ++ DSFT+ S+L + + G EI+ A + D ++ + ++ +DM+
Sbjct: 196 EYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMH 255
Query: 282 AKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFS 341
KC E + F + R+ +SW+++I G NG + + F M ++P V+F
Sbjct: 256 LKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFL 315
Query: 342 SVIPACAHLTALNLGKQLHGCIIR---LGFDDNKFIASSLVDMYAKCGNIKMARYIFDKI 398
V+ AC+H +N GK+ +++ + K + +VD+ + G ++ A K+
Sbjct: 316 GVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKM 375
Query: 399 ETR-DMVAWTAIIMGCAMH 416
D W A++ CA+H
Sbjct: 376 PVEPDTGIWGALLGACAVH 394
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%)
Query: 357 KQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMH 416
K++H ++R GF + + + L++ G++ AR +FD++ + W + G +
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 417 GHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAG 452
+++ L++KM + GVRP + V+ A S G
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLG 123
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 399 bits (1024), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/521 (37%), Positives = 320/521 (61%), Gaps = 1/521 (0%)
Query: 190 RKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEH 249
R +F+ M D+V +N++ G ++ E + E+ +D + PD++T S+L A
Sbjct: 83 RHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVA 142
Query: 250 VDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSII 309
+ +G ++H +++ G D +V++ +LI+MY +C V+ + F + + +N++I
Sbjct: 143 KALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMI 202
Query: 310 AGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFD 369
G + + ++ + FR+M +KP +++ SV+ +CA L +L+LGK +H + F
Sbjct: 203 TGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFC 262
Query: 370 DNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM 429
+ ++L+DM+AKCG++ A IF+K+ +D AW+A+I+ A HG A ++ +FE+M
Sbjct: 263 KYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERM 322
Query: 430 LEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGR 489
+ V+P + F+ +L ACSH G V+EG KYF+ M F I P ++HY ++ DLL RAG
Sbjct: 323 RSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGN 382
Query: 490 LEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNI 549
LE+AY+FI + I PT +W LLAAC +H +++LAEKV ++I +D + G YV++SN+
Sbjct: 383 LEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNL 442
Query: 550 YSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNIL 609
Y+ K+W+ LR M+ + K P CS IE+ N VH F +GD K++ AL+ +
Sbjct: 443 YARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEM 502
Query: 610 LEQMEKEGYVLDTSEVLH-DVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRV 668
+++++ GYV DTS V+H +++D+ K LR HSE+LAI F RV+KN+RV
Sbjct: 503 VKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRV 562
Query: 669 CVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
C DCH A K IS I GR++V+RD RFHHF +G CSCGD+W
Sbjct: 563 CRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 169/365 (46%), Gaps = 35/365 (9%)
Query: 106 GISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGF 165
GI P + FPSLLKA GLD ++Y L+NMY + +
Sbjct: 124 GILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECE----- 178
Query: 166 GSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVR 225
++DS R VFD + VV +N +I G A+ EAL + R
Sbjct: 179 -------------------DVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFR 219
Query: 226 EMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCN 285
EM LKP+ TL S+L A + G IH YA +H F V + ++LIDM+AKC
Sbjct: 220 EMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCG 279
Query: 286 RVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIP 345
++ ++ F + Y+D +W+++I +GK ++ + F +M V+P +++F ++
Sbjct: 280 SLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLN 339
Query: 346 ACAHLTALNLGKQLHGCII-RLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDM- 403
AC+H + G++ ++ + G + S+VD+ ++ GN++ A DK+
Sbjct: 340 ACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTP 399
Query: 404 VAWTAIIMGCAMHGHALDAVSLFEKMLE--DGVRPCYVAFMAVLTACSHAGLVDEGWKYF 461
+ W ++ C+ H + A + E++ E D YV S+ ++ W+Y
Sbjct: 400 MLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVIL-------SNLYARNKKWEYV 452
Query: 462 NSMEK 466
+S+ K
Sbjct: 453 DSLRK 457
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/559 (38%), Positives = 326/559 (58%), Gaps = 33/559 (5%)
Query: 183 KCE-IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
KC ID +++FD A ++ N + + + G+ REAL + M D ++PD ++ S
Sbjct: 283 KCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLS 342
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLR--------- 292
+ ++ +++ G HGY +R+GF+ I ++LIDMY KC+R + + R
Sbjct: 343 AISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT 402
Query: 293 ----------------------AFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLK 330
F +P ++ +SWN+II+G VQ F++ I F M
Sbjct: 403 VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQS 462
Query: 331 AK-VKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIK 389
+ V V+ S+ AC HL AL+L K ++ I + G + + ++LVDM+++CG+ +
Sbjct: 463 QEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPE 522
Query: 390 MARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACS 449
A IF+ + RD+ AWTA I AM G+A A+ LF+ M+E G++P VAF+ LTACS
Sbjct: 523 SAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACS 582
Query: 450 HAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVW 509
H GLV +G + F SM K ++P HY + DLLGRAG LEEA I +M ++P +W
Sbjct: 583 HGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIW 642
Query: 510 STLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSK 569
++LLAACR +VE+A +KI ++ PE G+YVL+SN+Y++A RW D AK+R+ M+ K
Sbjct: 643 NSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEK 702
Query: 570 GLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDV 629
GL+K P S I+I K H F +GD+SHP I L+ + ++ G+V D S VL DV
Sbjct: 703 GLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDV 762
Query: 630 DDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVV 689
D++ K +L HSE+LA+A+ R++KN+RVC DCH+ KF SK+ REI++
Sbjct: 763 DEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIIL 822
Query: 690 RDNSRFHHFMNGSCSCGDY 708
RDN+RFH+ G CSCGD+
Sbjct: 823 RDNNRFHYIRQGKCSCGDF 841
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 150/311 (48%), Gaps = 21/311 (6%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
GLD D+ T L+ C++ A +VF+ + G
Sbjct: 59 GLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT-------------------- 98
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
+N++I G A +G+ EA+ + M + + PD +T L A+ G++IHG
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQ 320
++ G+ D+F+ +SL+ YA+C ++ + + F + R+ +SW S+I G +
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 321 GIG-FFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLV 379
+ FFR + +V P V+ VI ACA L L G++++ I G + N + S+LV
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278
Query: 380 DMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYV 439
DMY KC I +A+ +FD+ ++ A+ G +A+ +F M++ GVRP +
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 440 AFMAVLTACSH 450
+ ++ +++CS
Sbjct: 339 SMLSAISSCSQ 349
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 108/208 (51%), Gaps = 5/208 (2%)
Query: 259 HGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLL----PYRDAISWNSIIAGCVQ 314
H + G D DV + L+ + E A + Y +NS+I G
Sbjct: 52 HRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYAS 111
Query: 315 NGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFI 374
+G ++ I F +M+ + + P + +F + ACA A G Q+HG I+++G+ + F+
Sbjct: 112 SGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFV 171
Query: 375 ASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLED-G 433
+SLV YA+CG + AR +FD++ R++V+WT++I G A A DAV LF +M+ D
Sbjct: 172 QNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEE 231
Query: 434 VRPCYVAFMAVLTACSHAGLVDEGWKYF 461
V P V + V++AC+ ++ G K +
Sbjct: 232 VTPNSVTMVCVISACAKLEDLETGEKVY 259
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 159/341 (46%), Gaps = 24/341 (7%)
Query: 150 NALMNMYCKVQNLGGFGSANKVFDENPQR----------GKGCKCEIDSVRKVFDLMPAR 199
NAL++MY K +A ++FD + G E+D+ + F+ MP +
Sbjct: 376 NALIDMYMKCHRQD---TAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEK 432
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREM-GDDKLKPDSFTLSSILPIFAEHVDVVKGMEI 258
++VSWNT+I+G Q +F EA+++ M + + D T+ SI + I
Sbjct: 433 NIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWI 492
Query: 259 HGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKF 318
+ Y ++G DV +G++L+DM+++C E ++ F L RD +W + I G
Sbjct: 493 YYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNA 552
Query: 319 DQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRL-GFDDNKFIASS 377
++ I F M++ +KP V+F + AC+H + GK++ +++L G
Sbjct: 553 ERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGC 612
Query: 378 LVDMYAKCGNIKMARYIFD--KIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM--LEDG 433
+VD+ + G ++ A + + +E D++ W +++ C + G+ A EK+ L
Sbjct: 613 MVDLLGRAGLLEEAVQLIEDMPMEPNDVI-WNSLLAACRVQGNVEMAAYAAEKIQVLAPE 671
Query: 434 VRPCYVAFMAVLTACSHAGLVDEGWKYFNSM-EKDFRIAPG 473
YV V + AG ++ K SM EK R PG
Sbjct: 672 RTGSYVLLSNVYAS---AGRWNDMAKVRLSMKEKGLRKPPG 709
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/550 (37%), Positives = 308/550 (56%), Gaps = 32/550 (5%)
Query: 192 VFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVD 251
VFD D WN +I G + + +L + + M +++T S+L +
Sbjct: 71 VFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSA 130
Query: 252 VVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAG 311
+ +IH + G++ DV+ +SLI+ YA + + F +P D +SWNS+I G
Sbjct: 131 FEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKG 190
Query: 312 CVQNGKFDQGIGFFRQMLK-------------------------------AKVKPMQVSF 340
V+ GK D + FR+M + + V+P VS
Sbjct: 191 YVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSL 250
Query: 341 SSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIET 400
++ + ACA L AL GK +H + + + + L+DMYAKCG ++ A +F I+
Sbjct: 251 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK 310
Query: 401 RDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKY 460
+ + AWTA+I G A HGH +A+S F +M + G++P + F AVLTACS+ GLV+EG
Sbjct: 311 KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 370
Query: 461 FNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHK 520
F SME+D+ + P +EHY + DLLGRAG L+EA FI M ++P +W LL ACR HK
Sbjct: 371 FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHK 430
Query: 521 SVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWI 580
++EL E++ + ++ +DP + G YV +NI++ K+W AA+ R M+ +G+ K P CS I
Sbjct: 431 NIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490
Query: 581 EIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHD-VDDEYKRDLLR 639
+ H FLAGD+SHP +KI I+ ++E+ GYV + E+L D VDD+ + ++
Sbjct: 491 SLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVH 550
Query: 640 THSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFM 699
HSE+LAI + R++KN+RVC DCH K ISKI R+IV+RD +RFHHF
Sbjct: 551 QHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFR 610
Query: 700 NGSCSCGDYW 709
+G CSCGDYW
Sbjct: 611 DGKCSCGDYW 620
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 152/316 (48%), Gaps = 17/316 (5%)
Query: 114 FPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGFGSANKVFD 173
FPSLLKA + G + D+Y N+L+N Y G F A+ +FD
Sbjct: 118 FPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVT---GNFKLAHLLFD 174
Query: 174 ENPQ----------RGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDM 223
P+ +G ++D +F M ++ +SW T+I+G Q M +EAL +
Sbjct: 175 RIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQL 234
Query: 224 VREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAK 283
EM + ++PD+ +L++ L A+ + +G IH Y + D +G LIDMYAK
Sbjct: 235 FHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAK 294
Query: 284 CNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSV 343
C +E +L F + + +W ++I+G +G + I F +M K +KP ++F++V
Sbjct: 295 CGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAV 354
Query: 344 IPACAHLTALNLGKQLHGCIIRLGFDDNKFIA--SSLVDMYAKCGNIKMARYIFDKIETR 401
+ AC++ + GK + + R ++ I +VD+ + G + A+ ++ +
Sbjct: 355 LTACSYTGLVEEGKLIFYSMER-DYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLK 413
Query: 402 -DMVAWTAIIMGCAMH 416
+ V W A++ C +H
Sbjct: 414 PNAVIWGALLKACRIH 429
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 394 bits (1012), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/566 (36%), Positives = 316/566 (55%), Gaps = 19/566 (3%)
Query: 155 MYCKVQNLGGFGSANKVFDENPQR---------GKGCK-CEIDSVRKVFDLMPARDVVSW 204
M+ + + G A K++D P + G C+ +D R +FD M R+VV+W
Sbjct: 147 MFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTW 206
Query: 205 NTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIR 264
T+I G QN +D+ R++ + + + +S+L + + E
Sbjct: 207 TTMITGYRQNN----RVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPM 262
Query: 265 HGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGF 324
V +++I + + + + R F L+ RD +W +I + G + +
Sbjct: 263 K----PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDL 318
Query: 325 FRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAK 384
F QM K V+P S S++ CA L +L G+Q+H ++R FDD+ ++AS L+ MY K
Sbjct: 319 FAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVK 378
Query: 385 CGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAV 444
CG + A+ +FD+ ++D++ W +II G A HG +A+ +F +M G P V +A+
Sbjct: 379 CGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAI 438
Query: 445 LTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQP 504
LTACS+AG ++EG + F SME F + P +EHY+ D+LGRAG++++A + I +M I+P
Sbjct: 439 LTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKP 498
Query: 505 TGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRI 564
+VW LL AC+ H ++LAE K+ +P+N G YVL+S+I ++ +W D A +R
Sbjct: 499 DATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRK 558
Query: 565 HMRSKGLKKTPACSWIEIGNKVHTFLAGD-KSHPYYDKINEALNILLEQMEKEGYVLDTS 623
+MR+ + K P CSWIE+G KVH F G K+HP I L + + GY D S
Sbjct: 559 NMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCS 618
Query: 624 EVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIV 683
VLHDVD+E K D L HSERLA+A+ RV+KN+RVC DCH AIK ISK+
Sbjct: 619 HVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVT 678
Query: 684 GREIVVRDNSRFHHFMNGSCSCGDYW 709
REI++RD +RFHHF NG CSC DYW
Sbjct: 679 EREIILRDANRFHHFNNGECSCRDYW 704
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 154/351 (43%), Gaps = 36/351 (10%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP 244
+I+ RK FD + + + SWN++++G NG+ +EA R++ D+ + + + + ++
Sbjct: 32 KINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEA----RQLFDEMSERNVVSWNGLVS 87
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS 304
+ ++ +V+ + +V ++++ Y + V + F+ +P R+ +S
Sbjct: 88 GYIKNRMIVEARNVFELMPER----NVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVS 143
Query: 305 WNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCII 364
W + G + +G+ D+ + M VK + S + + C G+
Sbjct: 144 WTVMFGGLIDDGRIDKARKLYDMM---PVKDVVASTNMIGGLCRE------GRVDEA--- 191
Query: 365 RLGFDD----NKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHAL 420
RL FD+ N ++++ Y + + +AR +F+ + + V+WT++++G + G
Sbjct: 192 RLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIE 251
Query: 421 DAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAV 480
DA FE M V C A++ G + + + F+ ME + +
Sbjct: 252 DAEEFFEVMPMKPVIACN----AMIVGFGEVGEISKARRVFDLMEDRDNAT-----WRGM 302
Query: 481 ADLLGRAGRLEEAYDFISNM---GIQPTGSVWSTLLAACRAHKSVELAEKV 528
R G EA D + M G++P+ ++L+ C S++ +V
Sbjct: 303 IKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQV 353
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 86/220 (39%), Gaps = 26/220 (11%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M+ G+ P+ S+L D D+Y A+ LM MY K
Sbjct: 322 MQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCG- 380
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
E+ + VFD ++D++ WN++I+G A +G+ EAL
Sbjct: 381 -----------------------ELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEAL 417
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEI-HGYAIRHGFDGDVFIGSSLIDM 280
+ EM P+ TL +IL + + +G+EI + V S +DM
Sbjct: 418 KIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDM 477
Query: 281 YAKCNRVEHSLRAFYLLPYR-DAISWNSIIAGCVQNGKFD 319
+ +V+ ++ + + DA W +++ C + + D
Sbjct: 478 LGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLD 517
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 130/310 (41%), Gaps = 63/310 (20%)
Query: 278 IDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQ 337
I ++ ++ + + F L ++ SWNSI++G NG + F +M + V
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV---- 79
Query: 338 VSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDK 397
VS++ ++ G+ N+ I AR +F+
Sbjct: 80 VSWNGLVS---------------------GYIKNRMIVE--------------ARNVFEL 104
Query: 398 IETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG 457
+ R++V+WTA++ G G +A SLF +M E V F GL+D+G
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMF---------GGLIDDG 155
Query: 458 WKYFNSMEKDFRIAPGLEHYAAVADLLG---RAGRLEEAYDFISNMGIQPTGSVWSTLLA 514
+ K + + P ++ A +++G R GR++EA M + W+T++
Sbjct: 156 --RIDKARKLYDMMP-VKDVVASTNMIGGLCREGRVDEARLIFDEMR-ERNVVTWTTMIT 211
Query: 515 ACRAHKSVELAEKVVDKILLVDPENMG-AYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKK 573
R + V++A K+ + V PE ++ M Y+ + R +DA + M +K
Sbjct: 212 GYRQNNRVDVARKLFE----VMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVM---PMKP 264
Query: 574 TPACSWIEIG 583
AC+ + +G
Sbjct: 265 VIACNAMIVG 274
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/612 (36%), Positives = 320/612 (52%), Gaps = 32/612 (5%)
Query: 106 GISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGF 165
GI P F + LKA G + + N+L++MY K G
Sbjct: 102 GIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKC---GRI 158
Query: 166 GSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVR 225
A KVF R++ D R ++SWN +IAG G +ALD
Sbjct: 159 NEAEKVF-----------------RRIVD----RSLISWNAMIAGFVHAGYGSKALDTFG 197
Query: 226 EMGDDKLK--PDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGF--DGDVFIGSSLIDMY 281
M + +K PD FTL+S+L + + G +IHG+ +R GF I SL+D+Y
Sbjct: 198 MMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLY 257
Query: 282 AKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFS 341
KC + + +AF + + ISW+S+I G Q G+F + +G F+++ + + + S
Sbjct: 258 VKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALS 317
Query: 342 SVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR 401
S+I A L GKQ+ ++L + +S+VDMY KCG + A F +++ +
Sbjct: 318 SIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLK 377
Query: 402 DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYF 461
D+++WT +I G HG +V +F +ML + P V ++AVL+ACSH+G++ EG + F
Sbjct: 378 DVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELF 437
Query: 462 NSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKS 521
+ + + I P +EHYA V DLLGRAGRL+EA I M I+P +W TLL+ CR H
Sbjct: 438 SKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGD 497
Query: 522 VELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIE 581
+EL ++V +L +D +N YV+MSN+Y A W + R KGLKK SW+E
Sbjct: 498 IELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVE 557
Query: 582 IGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKE-GYVLDTSEVLHDVDDEYKRDLLRT 640
I +VH F +G+ SHP I E L ++ +E GYV LHD+DDE K + LR
Sbjct: 558 IEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRA 617
Query: 641 HSERLAIAFXXXX---XXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHH 697
HSE+LAI RV KN+RVCVDCH IK +SKI VVRD RFH
Sbjct: 618 HSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHS 677
Query: 698 FMNGSCSCGDYW 709
F +G CSCGDYW
Sbjct: 678 FEDGCCSCGDYW 689
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 212/419 (50%), Gaps = 34/419 (8%)
Query: 107 ISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGFG 166
I R S+L+ T G +L T+N L++MYCK +
Sbjct: 2 IPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCR------ 55
Query: 167 SANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVRE 226
E KVFD MP R+VVSW+ +++G+ NG + +L + E
Sbjct: 56 ------------------EPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSE 97
Query: 227 MGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNR 286
MG + P+ FT S+ L + KG++IHG+ ++ GF+ V +G+SL+DMY+KC R
Sbjct: 98 MGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGR 157
Query: 287 VEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVK--PMQVSFSSVI 344
+ + + F + R ISWN++IAG V G + + F M +A +K P + + +S++
Sbjct: 158 INEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLL 217
Query: 345 PACAHLTALNLGKQLHGCIIRLGF--DDNKFIASSLVDMYAKCGNIKMARYIFDKIETRD 402
AC+ + GKQ+HG ++R GF + I SLVD+Y KCG + AR FD+I+ +
Sbjct: 218 KACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKT 277
Query: 403 MVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFN 462
M++W+++I+G A G ++A+ LF+++ E + A +++ + L+ +G K
Sbjct: 278 MISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQG-KQMQ 336
Query: 463 SMEKDFRIAPGLEHYA--AVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAH 519
++ ++ GLE +V D+ + G ++EA + M ++ S W+ ++ H
Sbjct: 337 ALA--VKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVIS-WTVVITGYGKH 392
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/507 (38%), Positives = 305/507 (60%), Gaps = 1/507 (0%)
Query: 204 WNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAI 263
+NT+I G F EAL EM +PD+FT +L + +G +IHG
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 264 RHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIG 323
+ G + DVF+ +SLI+MY +C +E S F L + A SW+S+++ G + + +
Sbjct: 160 KLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLL 219
Query: 324 FFRQML-KAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMY 382
FR M + +K + S + ACA+ ALNLG +HG ++R + N + +SLVDMY
Sbjct: 220 LFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMY 279
Query: 383 AKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFM 442
KCG + A +IF K+E R+ + ++A+I G A+HG A+ +F KM+++G+ P +V ++
Sbjct: 280 VKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYV 339
Query: 443 AVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGI 502
+VL ACSH+GLV EG + F M K+ ++ P EHY + DLLGRAG LEEA + I ++ I
Sbjct: 340 SVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPI 399
Query: 503 QPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKL 562
+ +W T L+ CR +++EL + ++L + N G Y+L+SN+YS + W D A+
Sbjct: 400 EKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVART 459
Query: 563 RIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDT 622
R + KGLK+TP S +E+ K H F++ D+SHP +I + L+ + Q++ EGY D
Sbjct: 460 RTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDL 519
Query: 623 SEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKI 682
+++L +VD+E K++ L+ HS+++AIAF ++ +N+R+C DCHT K IS I
Sbjct: 520 TQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMI 579
Query: 683 VGREIVVRDNSRFHHFMNGSCSCGDYW 709
REIVVRD +RFH F G+CSC DYW
Sbjct: 580 YEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 148/317 (46%), Gaps = 27/317 (8%)
Query: 100 NAMRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKV 159
N M G P +P LLKA T GL+ D++ N+L+NMY
Sbjct: 121 NEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMY--- 177
Query: 160 QNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFRE 219
G+ + E+ S VF+ + ++ SW+++++ A GM+ E
Sbjct: 178 -------------------GRCGEMELSSA--VFEKLESKTAASWSSMVSARAGMGMWSE 216
Query: 220 ALDMVREM-GDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLI 278
L + R M + LK + + S L A + GM IHG+ +R+ + ++ + +SL+
Sbjct: 217 CLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLV 276
Query: 279 DMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQV 338
DMY KC ++ +L F + R+ ++++++I+G +G+ + + F +M+K ++P V
Sbjct: 277 DMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHV 336
Query: 339 SFSSVIPACAHLTALNLGKQLHGCIIRLG-FDDNKFIASSLVDMYAKCGNIKMARYIFDK 397
+ SV+ AC+H + G+++ +++ G + LVD+ + G ++ A
Sbjct: 337 VYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQS 396
Query: 398 IE-TRDMVAWTAIIMGC 413
I ++ V W + C
Sbjct: 397 IPIEKNDVIWRTFLSQC 413
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/562 (36%), Positives = 316/562 (56%), Gaps = 25/562 (4%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
GL ++ NAL++MY K+ E+ R+V MP RD
Sbjct: 375 GLFYNQIIGNALVSMYGKIG------------------------EMSESRRVLLQMPRRD 410
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVV-KGMEIH 259
VV+WN +I G A++ +AL + M + + + T+ S+L D++ +G +H
Sbjct: 411 VVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLH 470
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFD 319
Y + GF+ D + +SLI MYAKC + S F L R+ I+WN+++A +G +
Sbjct: 471 AYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGE 530
Query: 320 QGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLV 379
+ + +M V Q SFS + A A L L G+QLHG ++LGF+ + FI ++
Sbjct: 531 EVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAA 590
Query: 380 DMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYV 439
DMY+KCG I + R + +W +I HG+ + + F +MLE G++P +V
Sbjct: 591 DMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHV 650
Query: 440 AFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISN 499
F+++LTACSH GLVD+G Y++ + +DF + P +EH V DLLGR+GRL EA FIS
Sbjct: 651 TFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISK 710
Query: 500 MGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDA 559
M ++P VW +LLA+C+ H +++ K + + ++PE+ YVL SN+++ RW+D
Sbjct: 711 MPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDV 770
Query: 560 AKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYV 619
+R M K +KK ACSW+++ +KV +F GD++HP +I L + + +++ GYV
Sbjct: 771 ENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYV 830
Query: 620 LDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFI 679
DTS+ L D D+E K L HSERLA+A+ R+ KN+R+C DCH+ KF+
Sbjct: 831 ADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFV 890
Query: 680 SKIVGREIVVRDNSRFHHFMNG 701
S+++GR IV+RD RFHHF G
Sbjct: 891 SRVIGRRIVLRDQYRFHHFERG 912
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 126/470 (26%), Positives = 218/470 (46%), Gaps = 39/470 (8%)
Query: 181 GCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLS 240
G +D +FD M RD +SWN++ A AQNG E+ + M + +S T+S
Sbjct: 189 GSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVS 248
Query: 241 SILPIFAEHVDVVK-GMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPY 299
++L + HVD K G IHG ++ GFD V + ++L+ MYA R + F +P
Sbjct: 249 TLLSVLG-HVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT 307
Query: 300 RDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQL 359
+D ISWNS++A V +G+ +G M+ + V+F+S + AC G+ L
Sbjct: 308 KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRIL 367
Query: 360 HGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHA 419
HG ++ G N+ I ++LV MY K G + +R + ++ RD+VAW A+I G A
Sbjct: 368 HGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDP 427
Query: 420 LDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAA 479
A++ F+ M +GV Y+ ++VL+AC G + E K ++ + ++ G E
Sbjct: 428 DKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHA----YIVSAGFESDEH 483
Query: 480 VADLL----GRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLV 535
V + L + G L + D + + + W+ +LAA H E K+V K
Sbjct: 484 VKNSLITMYAKCGDLSSSQDLFNGLDNRNI-ITWNAMLAANAHHGHGEEVLKLVSK---- 538
Query: 536 DPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKS 595
M ++ + + +S ++ AAKL + + L +++G + +F+ +
Sbjct: 539 ----MRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA----VKLGFEHDSFIFNAAA 590
Query: 596 HPYYD-------------KINEAL---NILLEQMEKEGYVLDTSEVLHDV 629
Y +N +L NIL+ + + GY + H++
Sbjct: 591 DMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEM 640
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 140/259 (54%), Gaps = 4/259 (1%)
Query: 196 MPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVK- 254
MP R+ VSWNT+++G + G++ E ++ R+M D +KP SF ++S++ + +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 255 GMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQ 314
G+++HG+ + G DV++ ++++ +Y V S + F +P R+ +SW S++ G
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 315 NGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFI 374
G+ ++ I ++ M V + S S VI +C L +LG+Q+ G +++ G + +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 375 ASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM--LED 432
+SL+ M GN+ A YIFD++ RD ++W +I A +GH ++ +F M D
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 433 GVRPCYVA-FMAVLTACSH 450
V V+ ++VL H
Sbjct: 241 EVNSTTVSTLLSVLGHVDH 259
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 159/354 (44%), Gaps = 25/354 (7%)
Query: 105 LGISPTRHFFPSLLKA-STXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLG 163
LGI P+ SL+ A GL D+Y + A++++Y
Sbjct: 35 LGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLY------- 87
Query: 164 GFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDM 223
G + RKVF+ MP R+VVSW +++ G + G E +D+
Sbjct: 88 -----------------GVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDI 130
Query: 224 VREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAK 283
+ M + + + ++S ++ D G +I G ++ G + + + +SLI M
Sbjct: 131 YKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGS 190
Query: 284 CNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSV 343
V+++ F + RD ISWNSI A QNG ++ F M + + + S++
Sbjct: 191 MGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTL 250
Query: 344 IPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDM 403
+ H+ G+ +HG ++++GFD + ++L+ MYA G A +F ++ T+D+
Sbjct: 251 LSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDL 310
Query: 404 VAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG 457
++W +++ G +LDA+ L M+ G YV F + L AC ++G
Sbjct: 311 ISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG 364
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 125/234 (53%), Gaps = 15/234 (6%)
Query: 297 LPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTAL-NL 355
+P R+ +SWN++++G V+ G + +G+ FFR+M +KP +S++ AC ++
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 356 GKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAM 415
G Q+HG + + G + +++++++ +Y G + +R +F+++ R++V+WT++++G +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 416 HGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDE--GWKYFNSMEKDFRIAPG 473
G + + +++ M +GV + V+++C L DE G + + K G
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGL--LKDESLGRQIIGQVVKS-----G 173
Query: 474 LEHYAAVAD----LLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVE 523
LE AV + +LG G ++ A M + T S W+++ AA + +E
Sbjct: 174 LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS-WNSIAAAYAQNGHIE 226
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/557 (37%), Positives = 313/557 (56%), Gaps = 41/557 (7%)
Query: 191 KVFDLMPARDVVSWNTVI-AGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEH 249
+VFD MP RD ++W +V+ A N N + L+PD F S+++ A
Sbjct: 59 QVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANL 118
Query: 250 VDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCN------------------------ 285
+ G ++H + I + D + SSL+DMYAKC
Sbjct: 119 GSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMV 178
Query: 286 -------RVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQ- 337
R E +L F +LP ++ SW ++I+G VQ+GK + F +M + +V +
Sbjct: 179 SGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDP 238
Query: 338 VSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDK 397
+ SS++ ACA+L A G+Q+HG +I LGFD FI+++L+DMYAKC ++ A+ IF +
Sbjct: 239 LVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSR 298
Query: 398 IETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG 457
+ RD+V+WT++I+G A HG A A++L++ M+ GV+P V F+ ++ ACSH G V++G
Sbjct: 299 MRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKG 358
Query: 458 WKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAAC- 516
+ F SM KD+ I P L+HY + DLLGR+G L+EA + I M P W+ LL+AC
Sbjct: 359 RELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACK 418
Query: 517 ---RAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKK 573
R + +A+ +V L DP Y+L+SNIY++A W ++ R + ++K
Sbjct: 419 RQGRGQMGIRIADHLVSSFKLKDPST---YILLSNIYASASLWGKVSEARRKLGEMEVRK 475
Query: 574 TPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQME-KEGYVLDTSEVLHDVDDE 632
P S +E+ + F AG+ SHP + I L L E+M + GYV DTS +LHD+D++
Sbjct: 476 DPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQ 535
Query: 633 YKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDN 692
K LL HSER A+A+ R++KN+RVC DCH +K IS+I REI+VRD
Sbjct: 536 EKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDA 595
Query: 693 SRFHHFMNGSCSCGDYW 709
+R+HHF G CSC D+W
Sbjct: 596 TRYHHFKGGKCSCNDFW 612
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 161/347 (46%), Gaps = 25/347 (7%)
Query: 145 DLYTANALMNMYCKVQNLGGFGSANKVFDENPQR----------GKGCKCEIDSVRKVFD 194
D ++L++MY K G SA VFD + G + ++F
Sbjct: 139 DEVVKSSLVDMYAKC---GLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFR 195
Query: 195 LMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKP-DSFTLSSILPIFAEHVDVV 253
++P +++ SW +I+G Q+G EA + EM +++ D LSSI+ A +
Sbjct: 196 ILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASI 255
Query: 254 KGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCV 313
G ++HG I GFD VFI ++LIDMYAKC+ V + F + +RD +SW S+I G
Sbjct: 256 AGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMA 315
Query: 314 QNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIR-LGFDDNK 372
Q+G+ ++ + + M+ VKP +V+F +I AC+H+ + G++L + + G +
Sbjct: 316 QHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSL 375
Query: 373 FIASSLVDMYAKCGNIKMARYIFDKIE-TRDMVAWTAIIMGCAMHGHALDAVSLFEKM-- 429
+ L+D+ + G + A + + D W A++ C G + + + +
Sbjct: 376 QHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVS 435
Query: 430 ---LEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPG 473
L+D Y+ + + S G V E + ME R PG
Sbjct: 436 SFKLKDP--STYILLSNIYASASLWGKVSEARRKLGEME--VRKDPG 478
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 122/226 (53%), Gaps = 5/226 (2%)
Query: 243 LPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDA 302
L + A + + +H + ++ G + ++L+++Y KC H+L+ F +P+RD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 303 ISWNSIIAGCVQNGKFDQGI-GFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
I+W S++ Q + + F + ++P FS+++ ACA+L +++ G+Q+H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALD 421
I + +++ + SSLVDMYAKCG + A+ +FD I ++ ++WTA++ G A G +
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 422 AVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKD 467
A+ LF + V+ Y ++ A+++ +G E + F M ++
Sbjct: 190 ALELFRIL---PVKNLY-SWTALISGFVQSGKGLEAFSVFTEMRRE 231
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/532 (36%), Positives = 320/532 (60%), Gaps = 5/532 (0%)
Query: 182 CKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
C ID+ R++FD +P R++ S+ ++I+G G + EA ++ + M ++ ++ T +
Sbjct: 171 CGMIIDA-RRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAV 229
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
+L A + G ++H A++ G + F+ LIDMY+KC +E + AF +P +
Sbjct: 230 MLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKT 289
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
++WN++IAG +G ++ + M + V Q + S +I L L L KQ H
Sbjct: 290 TVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHA 349
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALD 421
+IR GF+ ++LVD Y+K G + ARY+FDK+ +++++W A++ G A HG D
Sbjct: 350 SLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTD 409
Query: 422 AVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVA 481
AV LFEKM+ V P +V F+AVL+AC+++GL ++GW+ F SM + I P HYA +
Sbjct: 410 AVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMI 469
Query: 482 DLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMG 541
+LLGR G L+EA FI ++ T ++W+ LL ACR +++EL V +K+ + PE +G
Sbjct: 470 ELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLG 529
Query: 542 AYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYD- 600
YV+M N+Y++ + +AA + + SKGL PAC+W+E+G++ H+FL+GD+ Y +
Sbjct: 530 NYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNET 589
Query: 601 ---KINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXX 657
+I + ++ L+E++ + GY + +L DVD++ + + R HSE+LAIA+
Sbjct: 590 VKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEW 649
Query: 658 XXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
++ +N R+C +CH ++FIS + GRE+VVRD SRFHHF G CSCG YW
Sbjct: 650 NPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 106/177 (59%)
Query: 258 IHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGK 317
++G+ + +GF+ + ++ + ++ M+ KC + + R F +P R+ S+ SII+G V G
Sbjct: 145 VYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGN 204
Query: 318 FDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASS 377
+ + F+ M + +F+ ++ A A L ++ +GKQLH C ++LG DN F++
Sbjct: 205 YVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCG 264
Query: 378 LVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGV 434
L+DMY+KCG+I+ AR F+ + + VAW +I G A+HG++ +A+ L M + GV
Sbjct: 265 LIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGV 321
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 82/155 (52%), Gaps = 3/155 (1%)
Query: 300 RDAISWNSIIAGCVQNGKFDQGIGFFRQM-LKAKVKPMQVSFSSVIPACAHLTALNLGKQ 358
+ ++ S I V +F + F + ++ K ++ +++ AC L ++ K+
Sbjct: 85 KSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKR 144
Query: 359 LHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGH 418
++G ++ GF+ +++ + ++ M+ KCG I AR +FD+I R++ ++ +II G G+
Sbjct: 145 VYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGN 204
Query: 419 ALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGL 453
++A LF+ M E+ + C AV+ S AGL
Sbjct: 205 YVEAFELFKMMWEE-LSDCETHTFAVMLRAS-AGL 237
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 387 bits (995), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/542 (37%), Positives = 315/542 (58%), Gaps = 18/542 (3%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQN-GMFREALDMVREMGD-DKLKPDSFTLSSI 242
+++ +VFD + WNT+I A + EA + R+M + + PD T +
Sbjct: 98 DVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFV 157
Query: 243 LPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDA 302
L A +G ++H ++HGF GDV++ + LI +Y C ++ + + F +P R
Sbjct: 158 LKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSL 217
Query: 303 ISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGC 362
+SWNS+I V+ G++D + FR+M ++ +P + SV+ ACA L +L+LG H
Sbjct: 218 VSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAF 276
Query: 363 IIRLGFDD---NKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHA 419
++R D + + +SL++MY KCG+++MA +F ++ RD+ +W A+I+G A HG A
Sbjct: 277 LLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRA 336
Query: 420 LDAVSLFEKMLE--DGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHY 477
+A++ F++M++ + VRP V F+ +L AC+H G V++G +YF+ M +D+ I P LEHY
Sbjct: 337 EEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHY 396
Query: 478 AAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLL-AACRAHKSVELAEKVVDKILLVD 536
+ DL+ RAG + EA D + +M ++P +W +LL A C+ SVEL+E++ I+
Sbjct: 397 GCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTK 456
Query: 537 PEN-------MGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTF 589
+N GAYVL+S +Y++A RW D +R M G++K P CS IEI H F
Sbjct: 457 EDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEF 516
Query: 590 LAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSE--VLHDVDDEYKRDLLRTHSERLAI 647
AGD SHP +I + L ++ +++ GY+ D S+ ++ +D K LR HSERLAI
Sbjct: 517 FAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAI 576
Query: 648 AFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGD 707
AF R+ KN+RVC DCH K ISK+ EI+VRD RFHHF +GSCSC D
Sbjct: 577 AFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLD 636
Query: 708 YW 709
YW
Sbjct: 637 YW 638
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 148/321 (46%), Gaps = 32/321 (9%)
Query: 108 SPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGFGS 167
SP +H FP +LKA G D+Y N L+++Y GS
Sbjct: 148 SPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLY---------GS 198
Query: 168 ANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREM 227
C C +D RKVFD MP R +VSWN++I + G + AL + REM
Sbjct: 199 --------------CGC-LDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREM 243
Query: 228 GDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRH---GFDGDVFIGSSLIDMYAKC 284
+PD +T+ S+L A + G H + +R DV + +SLI+MY KC
Sbjct: 244 -QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKC 302
Query: 285 NRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQML--KAKVKPMQVSFSS 342
+ + + F + RD SWN++I G +G+ ++ + FF +M+ + V+P V+F
Sbjct: 303 GSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVG 362
Query: 343 VIPACAHLTALNLGKQLHGCIIR-LGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR 401
++ AC H +N G+Q ++R + +VD+ A+ G I A + + +
Sbjct: 363 LLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMK 422
Query: 402 -DMVAWTAIIMGCAMHGHALD 421
D V W +++ C G +++
Sbjct: 423 PDAVIWRSLLDACCKKGASVE 443
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 149/301 (49%), Gaps = 13/301 (4%)
Query: 251 DVVKGMEIHGYAIRHGFDGD---VFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNS 307
D+ + ++H + +R + + +F+ ++ + + + V ++ R F + + WN+
Sbjct: 60 DMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNT 119
Query: 308 IIAGCVQN-GKFDQGIGFFRQML-KAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIR 365
+I C + + ++ +R+ML + + P + +F V+ ACA++ + GKQ+H I++
Sbjct: 120 LIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVK 179
Query: 366 LGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSL 425
GF + ++ + L+ +Y CG + +AR +FD++ R +V+W ++I G A+ L
Sbjct: 180 HGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQL 239
Query: 426 FEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG-WKYFNSMEK-DFRIAPGLEHYAAVADL 483
F +M + P +VL+AC+ G + G W + + K D +A + ++ ++
Sbjct: 240 FREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEM 298
Query: 484 LGRAGRLEEAYDFISNMGIQPTGSVWSTLLAAC----RAHKSVELAEKVVDKILLVDPEN 539
+ G L A M + S W+ ++ RA +++ +++VDK V P +
Sbjct: 299 YCKCGSLRMAEQVFQGMQKRDLAS-WNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNS 357
Query: 540 M 540
+
Sbjct: 358 V 358
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 386 bits (992), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/556 (35%), Positives = 316/556 (56%), Gaps = 37/556 (6%)
Query: 190 RKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEH 249
R+V + + R+ W VI G A G F EA+ M M +++ P SFT S++L
Sbjct: 103 RRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTM 162
Query: 250 VDVVKGMEIHGYAIR-HGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSI 308
D+ G + H R GF V++G+++IDMY KC ++ + + F +P RD ISW +
Sbjct: 163 KDLNLGRQFHAQTFRLRGF-CFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 309 IA-------------------------------GCVQNGKFDQGIGFFRQMLKAKVKPMQ 337
IA G QN K + + +F +M K+ ++ +
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 338 VSFSSVIPACAHLTALNLGKQLHGCIIRLGFD--DNKFIASSLVDMYAKCGNIKMARYIF 395
V+ + I ACA L A + + G+ D+ I S+L+DMY+KCGN++ A +F
Sbjct: 282 VTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF 341
Query: 396 DKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKML-EDGVRPCYVAFMAVLTACSHAGLV 454
+ +++ ++++I+G A HG A +A+ LF M+ + ++P V F+ L ACSH+GLV
Sbjct: 342 MSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLV 401
Query: 455 DEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLA 514
D+G + F+SM + F + P +HY + DLLGR GRL+EA + I M ++P G VW LL
Sbjct: 402 DQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLG 461
Query: 515 ACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKT 574
ACR H + E+AE + + ++P+ +G Y+L+SN+Y++A W ++R ++ KGLKKT
Sbjct: 462 ACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKT 521
Query: 575 PACSWIEIGN-KVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEY 633
PA SW+ N ++H F G+ +HP +KI + L L+E++ GY D S V +DV D
Sbjct: 522 PAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNA 581
Query: 634 KRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNS 693
KR +L H+E+LA+AF ++KN+R+C+DCH ++ S++ G+ I++RDN
Sbjct: 582 KRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNM 641
Query: 694 RFHHFMNGSCSCGDYW 709
RFHHF +G CSCGD+W
Sbjct: 642 RFHHFRSGDCSCGDFW 657
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 122/230 (53%), Gaps = 6/230 (2%)
Query: 239 LSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRV--EHSLRAFYL 296
+SS++ + +++ + +IHG+ +R G D +I + LI K ++ R
Sbjct: 49 VSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEP 108
Query: 297 LPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLG 356
+ +R+ W ++I G GKFD+ I + M K ++ P+ +FS+++ AC + LNLG
Sbjct: 109 VQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLG 168
Query: 357 KQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMH 416
+Q H RL ++ ++++DMY KC +I AR +FD++ RD+++WT +I A
Sbjct: 169 RQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARV 228
Query: 417 GHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEK 466
G+ A LFE + + VA+ A++T + E +YF+ MEK
Sbjct: 229 GNMECAAELFESLPTKDM----VAWTAMVTGFAQNAKPQEALEYFDRMEK 274
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 163/350 (46%), Gaps = 32/350 (9%)
Query: 102 MRALGISPTRHFFPSLLKA-STXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQ 160
MR I+P F +LLKA T G F +Y N +++MY K +
Sbjct: 140 MRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCF-VYVGNTMIDMYVKCE 198
Query: 161 NLGGFGSANKVFDENPQRGKGCKCEI----------DSVRKVFDLMPARDVVSWNTVIAG 210
++ A KVFDE P+R E+ + ++F+ +P +D+V+W ++ G
Sbjct: 199 SID---CARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTG 255
Query: 211 NAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAE-----HVD-VVKGMEIHGYAIR 264
AQN +EAL+ M ++ D T++ + A+ + D V+ + GY+
Sbjct: 256 FAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSP- 314
Query: 265 HGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGF 324
V IGS+LIDMY+KC VE ++ F + ++ +++S+I G +G+ + +
Sbjct: 315 ---SDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHL 371
Query: 325 FRQML-KAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIR-LGFDDNKFIASSLVDMY 382
F M+ + ++KP V+F + AC+H ++ G+Q+ + + G + + +VD+
Sbjct: 372 FHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLL 431
Query: 383 AKCGNIKMARYIFDKIETRDMVA-WTAIIMGCAMHGHA----LDAVSLFE 427
+ G ++ A + + W A++ C +H + + A LFE
Sbjct: 432 GRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFE 481
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 383 bits (984), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/535 (38%), Positives = 311/535 (58%), Gaps = 50/535 (9%)
Query: 181 GCKCEIDSVRKVFDLMPARDVVSWNTVIA----GNAQNGMFREALDMVREMGDDKLKPDS 236
GC C ++ RKVFD M ++V+WN VI GN G RE+ D L
Sbjct: 153 GCGC-VEFARKVFDEMHQPNLVAWNAVITACFRGNDVAG--------AREIFDKML---- 199
Query: 237 FTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYL 296
+R+ +V + Y K +E + R F
Sbjct: 200 --------------------------VRNHTSWNVMLAG-----YIKAGELESAKRIFSE 228
Query: 297 LPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLG 356
+P+RD +SW+++I G NG F++ +FR++ +A + P +VS + V+ AC+ + G
Sbjct: 229 MPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFG 288
Query: 357 KQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKI-ETRDMVAWTAIIMGCAM 415
K LHG + + G+ + ++L+DMY++CGN+ MAR +F+ + E R +V+WT++I G AM
Sbjct: 289 KILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAM 348
Query: 416 HGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLE 475
HG +AV LF +M GV P ++F+++L ACSHAGL++EG YF+ M++ + I P +E
Sbjct: 349 HGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIE 408
Query: 476 HYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLV 535
HY + DL GR+G+L++AYDFI M I PT VW TLL AC +H ++ELAE+V ++ +
Sbjct: 409 HYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNEL 468
Query: 536 DPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKS 595
DP N G VL+SN Y+ A +WKD A +R M + +KKT A S +E+G ++ F AG+K
Sbjct: 469 DPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKK 528
Query: 596 HPYYDKINEAL-NILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXX 654
+ +E L I+L ++ GY + + L+DV++E K D + HSE+LA+AF
Sbjct: 529 KGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARL 588
Query: 655 XXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
R++KN+R+C DCH +K SK+ G EI+VRD +RFH F +GSCSC DYW
Sbjct: 589 SKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 132/278 (47%), Gaps = 19/278 (6%)
Query: 257 EIHGYAIRHGFDGDVFIGSSLIDMYAKC--NRVEHSLRAFYLLPYRDAISWNSIIAGCVQ 314
+IHG I++G D D + LI A + + ++ R P DA +N+++ G +
Sbjct: 23 QIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVRGYSE 82
Query: 315 NGKFDQGIGFFRQML-KAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKF 373
+ + + F +M+ K V P SF+ VI A + +L G Q+H ++ G + + F
Sbjct: 83 SDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLF 142
Query: 374 IASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDG 433
+ ++L+ MY CG ++ AR +FD++ ++VAW A+I C A +F+KML
Sbjct: 143 VGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKML--- 199
Query: 434 VRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRA--GRLE 491
VR + ++ +L AG ++ + F+ M P + + ++G A G
Sbjct: 200 VRN-HTSWNVMLAGYIKAGELESAKRIFSEM-------PHRDDVSWSTMIVGIAHNGSFN 251
Query: 492 EAYDFISNM---GIQPTGSVWSTLLAACRAHKSVELAE 526
E++ + + G+ P + +L+AC S E +
Sbjct: 252 ESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGK 289
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/558 (36%), Positives = 314/558 (56%), Gaps = 35/558 (6%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREM---GDDKLKPDSFTLSSI 242
+D ++ D + + N++I + ++ + ++ D R + G+D LKPD++T++ +
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGND-LKPDNYTVNFL 114
Query: 243 LPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAK------CNRVEHSL----- 291
+ G+++HG IR GFD D + + LI +YA+ C++V +S+
Sbjct: 115 VQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDF 174
Query: 292 --------------------RAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKA 331
+ F +P RD I+WN++I+G Q G+ + + F M
Sbjct: 175 VCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE 234
Query: 332 KVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMA 391
VK V+ SV+ AC L AL+ G+ H I R +A++LVD+YAKCG+++ A
Sbjct: 235 GVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKA 294
Query: 392 RYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHA 451
+F +E +++ W++ + G AM+G + LF M +DGV P V F++VL CS
Sbjct: 295 MEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVV 354
Query: 452 GLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWST 511
G VDEG ++F+SM +F I P LEHY + DL RAGRLE+A I M ++P +VWS+
Sbjct: 355 GFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSS 414
Query: 512 LLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGL 571
LL A R +K++EL K+L ++ N GAYVL+SNIY+ + W + + +R M+SKG+
Sbjct: 415 LLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGV 474
Query: 572 KKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDD 631
+K P CS +E+ +VH F GDKSHP Y +I+ + ++ GY DT+ V+ D+D+
Sbjct: 475 RKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDE 534
Query: 632 EYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRD 691
E K D L HSE+ AIAF R++KN+RVC DCH ISKI REI+VRD
Sbjct: 535 EEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRD 594
Query: 692 NSRFHHFMNGSCSCGDYW 709
+RFHHF +G CSC +W
Sbjct: 595 RNRFHHFKDGHCSCNGFW 612
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 151/304 (49%), Gaps = 17/304 (5%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKC----------EIDSVR 190
G D D + L+++Y + LG S +KVF+ P C+ ++ R
Sbjct: 138 GFDNDPHVQTGLISLYAE---LGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFAR 194
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHV 250
K+F+ MP RD ++WN +I+G AQ G REAL++ M + +K + + S+L +
Sbjct: 195 KLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLG 254
Query: 251 DVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIA 310
+ +G H Y R+ V + ++L+D+YAKC +E ++ F+ + ++ +W+S +
Sbjct: 255 ALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALN 314
Query: 311 GCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIR--LGF 368
G NG ++ + F M + V P V+F SV+ C+ + ++ G Q H +R G
Sbjct: 315 GLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG-QRHFDSMRNEFGI 373
Query: 369 DDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVA-WTAIIMGCAMHGHALDAVSLFE 427
+ LVD+YA+ G ++ A I ++ + A W++++ M+ + V +
Sbjct: 374 EPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASK 433
Query: 428 KMLE 431
KMLE
Sbjct: 434 KMLE 437
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 313/522 (59%), Gaps = 5/522 (0%)
Query: 192 VFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVD 251
+F +P D +N+VI ++ + + R M + P ++T +S++ A+
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSA 122
Query: 252 VVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAG 311
+ G +H +A+ GF D ++ ++L+ Y+KC +E + + F +P + ++WNS+++G
Sbjct: 123 LRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSG 182
Query: 312 CVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDN 371
QNG D+ I F QM ++ +P +F S++ ACA A++LG +H II G D N
Sbjct: 183 FEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLN 242
Query: 372 KFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLE 431
+ ++L+++Y++CG++ AR +FDK++ ++ AWTA+I HG+ AV LF KM +
Sbjct: 243 VKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMED 302
Query: 432 D-GVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRL 490
D G P V F+AVL+AC+HAGLV+EG + M K +R+ PG+EH+ + D+LGRAG L
Sbjct: 303 DCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFL 362
Query: 491 EEAYDFISNM---GIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMS 547
+EAY FI + G ++W+ +L AC+ H++ +L ++ +++ ++P+N G +V++S
Sbjct: 363 DEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLS 422
Query: 548 NIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALN 607
NIY+ + + + + +R M L+K S IE+ NK + F GD+SH +I L
Sbjct: 423 NIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLE 482
Query: 608 ILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIR 667
L+ + ++ GY + EV+H V++E K LR HSE+LA+AF ++KN+R
Sbjct: 483 TLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVDVAIT-IVKNLR 541
Query: 668 VCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
+C DCH+A K+IS + R+I VRD RFHHF NGSCSC DYW
Sbjct: 542 ICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 142/325 (43%), Gaps = 38/325 (11%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M + +SP+ + F S++K+ G D Y AL+ Y K +
Sbjct: 98 MLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGD 157
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
+ G R+VFD MP + +V+WN++++G QNG+ EA+
Sbjct: 158 MEG------------------------ARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAI 193
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMY 281
+ +M + +PDS T S+L A+ V G +H Y I G D +V +G++LI++Y
Sbjct: 194 QVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLY 253
Query: 282 AKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQML-KAKVKPMQVSF 340
++C V + F + + +W ++I+ +G Q + F +M P V+F
Sbjct: 254 SRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTF 313
Query: 341 SSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIAS-----SLVDMYAKCGNIKMARYIF 395
+V+ ACAH + G+ ++ + + + I +VDM + G + A
Sbjct: 314 VAVLSACAHAGLVEEGRSVYKRMTK----SYRLIPGVEHHVCMVDMLGRAGFLDEAYKFI 369
Query: 396 DKIETRDMVA----WTAIIMGCAMH 416
+++ WTA++ C MH
Sbjct: 370 HQLDATGKATAPALWTAMLGACKMH 394
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/527 (36%), Positives = 312/527 (59%), Gaps = 6/527 (1%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGD-DKLKPDSFTLSSIL 243
E+ ++F+ M R++V+WN +I A+NG +A ++M + + L+PD T ++L
Sbjct: 282 EVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLL 341
Query: 244 PIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAI 303
P A +++G IHGYA+R GF + + ++LIDMY +C +++ + F + ++ I
Sbjct: 342 PASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVI 397
Query: 304 SWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCI 363
SWNSIIA VQNGK + F+++ + + P + +S++PA A +L+ G+++H I
Sbjct: 398 SWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYI 457
Query: 364 IRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAV 423
++ + N I +SLV MYA CG+++ AR F+ I +D+V+W +IIM A+HG +V
Sbjct: 458 VKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISV 517
Query: 424 SLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADL 483
LF +M+ V P F ++L ACS +G+VDEGW+YF SM++++ I PG+EHY + DL
Sbjct: 518 WLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDL 577
Query: 484 LGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAY 543
+GR G A F+ M PT +W +LL A R HK + +AE ++I ++ +N G Y
Sbjct: 578 IGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCY 637
Query: 544 VLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKIN 603
VL+ N+Y+ A RW+D ++++ M SKG+ +T + S +E K H F GD+SH +KI
Sbjct: 638 VLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIY 697
Query: 604 EALNILLEQM-EKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRV 662
E L+++ + E++ YV S + + + + + R HS RLA F V
Sbjct: 698 EVLDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTV 757
Query: 663 IKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
N R+C CH ++ S++ REIVV D+ FHHF NG CSCG+YW
Sbjct: 758 RNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 185/359 (51%), Gaps = 14/359 (3%)
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHV 250
++FD M D WN +I G G++ EA+ M +K D+FT ++ A
Sbjct: 85 QLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGIS 144
Query: 251 DVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIA 310
+ +G +IH I+ GF DV++ +SLI +Y K + + F +P RD +SWNS+I+
Sbjct: 145 SLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMIS 204
Query: 311 GCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDD 370
G + G + F++MLK KP + S S + AC+H+ + +GK++H +R +
Sbjct: 205 GYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIET 264
Query: 371 -NKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM 429
+ + +S++DMY+K G + A IF+ + R++VAW +I A +G DA F+KM
Sbjct: 265 GDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKM 324
Query: 430 LE-DGVRPCYVAFMAVLTACS-HAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRA 487
E +G++P + + +L A + G G+ +M + F P + A+ D+ G
Sbjct: 325 SEQNGLQPDVITSINLLPASAILEGRTIHGY----AMRRGF--LPHMVLETALIDMYGEC 378
Query: 488 GRLEEAYDFISNMGIQPTGSVWSTLLAAC----RAHKSVELAEKVVDKILLVDPENMGA 542
G+L+ A M + S W++++AA + + ++EL +++ D L+ D + +
Sbjct: 379 GQLKSAEVIFDRMAEKNVIS-WNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIAS 436
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 174/354 (49%), Gaps = 30/354 (8%)
Query: 106 GISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGF 165
G+ +P ++K+ G D+Y N+L+++Y K+
Sbjct: 125 GVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKL------ 178
Query: 166 GSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVR 225
GC + + KVF+ MP RD+VSWN++I+G G +L + +
Sbjct: 179 ---------------GCAWDAE---KVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFK 220
Query: 226 EMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFD-GDVFIGSSLIDMYAKC 284
EM KPD F+ S L + G EIH +A+R + GDV + +S++DMY+K
Sbjct: 221 EMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKY 280
Query: 285 NRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAK-VKPMQVSFSSV 343
V ++ R F + R+ ++WN +I +NG+ F++M + ++P ++ ++
Sbjct: 281 GEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINL 340
Query: 344 IPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDM 403
+PA A L G+ +HG +R GF + + ++L+DMY +CG +K A IFD++ +++
Sbjct: 341 LPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNV 396
Query: 404 VAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG 457
++W +II +G A+ LF+++ + + P ++L A + + + EG
Sbjct: 397 ISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEG 450
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 97/170 (57%)
Query: 281 YAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSF 340
+A +E +L+ F + DA WN +I G G + + + F+ +M+ A VK ++
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 341 SSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIET 400
VI + A +++L GK++H +I+LGF + ++ +SL+ +Y K G A +F+++
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 401 RDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSH 450
RD+V+W ++I G G ++ LF++ML+ G +P + M+ L ACSH
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSH 243
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 380 bits (976), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/607 (34%), Positives = 325/607 (53%), Gaps = 27/607 (4%)
Query: 101 AMRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQ 160
AMR L + P S++ A G D+ N+L MY
Sbjct: 287 AMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYL--- 343
Query: 161 NLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREA 220
N G + A K+F M +D+VSW T+I+G N + +A
Sbjct: 344 NAGSWREAEKLFSR---------------------MERKDIVSWTTMISGYEYNFLPDKA 382
Query: 221 LDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDM 280
+D R M D +KPD T++++L A D+ G+E+H AI+ V + ++LI+M
Sbjct: 383 IDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINM 442
Query: 281 YAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSF 340
Y+KC ++ +L F+ +P ++ ISW SIIAG N + + + F RQM K ++P ++
Sbjct: 443 YSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAITL 501
Query: 341 SSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIET 400
++ + ACA + AL GK++H ++R G + F+ ++L+DMY +CG + A F+ +
Sbjct: 502 TAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QK 560
Query: 401 RDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKY 460
+D+ +W ++ G + G V LF++M++ VRP + F+++L CS + +V +G Y
Sbjct: 561 KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMY 620
Query: 461 FNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHK 520
F+ ME D+ + P L+HYA V DLLGRAG L+EA+ FI M + P +VW LL ACR H
Sbjct: 621 FSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHH 679
Query: 521 SVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWI 580
++L E I +D +++G Y+L+ N+Y+ +W++ AK+R M+ GL CSW+
Sbjct: 680 KIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWV 739
Query: 581 EIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRT 640
E+ KVH FL+ DK HP +IN L E+M + G + D + + ++
Sbjct: 740 EVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCG 799
Query: 641 HSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMN 700
HSER AIAF V KN+ +C +CH +KFISK V REI VRD FHHF +
Sbjct: 800 HSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKD 859
Query: 701 GSCSCGD 707
G CSCGD
Sbjct: 860 GECSCGD 866
Score = 169 bits (427), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 174/333 (52%), Gaps = 15/333 (4%)
Query: 192 VFDLMPARDVVSWNTVIAGNAQNGMFREALDMV-REMGDDKLKPDSFTLSSILPIFAEHV 250
VF M R++ SWN ++ G A+ G F EA+ + R + +KPD +T +L
Sbjct: 151 VFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIP 210
Query: 251 DVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIA 310
D+ +G E+H + +R+G++ D+ + ++LI MY KC V+ + F +P RD ISWN++I+
Sbjct: 211 DLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMIS 270
Query: 311 GCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDD 370
G +NG +G+ F M V P ++ +SVI AC L LG+ +H +I GF
Sbjct: 271 GYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAV 330
Query: 371 NKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKML 430
+ + +SL MY G+ + A +F ++E +D+V+WT +I G + A+ + M
Sbjct: 331 DISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMD 390
Query: 431 EDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVA----DLLGR 486
+D V+P + AVL+AC+ G +D G + I L Y VA ++ +
Sbjct: 391 QDSVKPDEITVAAVLSACATLGDLDTGVELHK-----LAIKARLISYVIVANNLINMYSK 445
Query: 487 AGRLEEAYDFISNMGIQPTGSV--WSTLLAACR 517
+++A D N+ P +V W++++A R
Sbjct: 446 CKCIDKALDIFHNI---PRKNVISWTSIIAGLR 475
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 200/430 (46%), Gaps = 32/430 (7%)
Query: 106 GISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGF 165
G+ P + FP +L+ G + D+ NAL+ MY K
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG----- 245
Query: 166 GSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVR 225
++ S R +FD MP RD++SWN +I+G +NGM E L++
Sbjct: 246 -------------------DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFF 286
Query: 226 EMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCN 285
M + PD TL+S++ D G +IH Y I GF D+ + +SL MY
Sbjct: 287 AMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAG 346
Query: 286 RVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIP 345
+ + F + +D +SW ++I+G N D+ I +R M + VKP +++ ++V+
Sbjct: 347 SWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLS 406
Query: 346 ACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVA 405
ACA L L+ G +LH I+ +A++L++MY+KC I A IF I +++++
Sbjct: 407 ACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVIS 466
Query: 406 WTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSME 465
WT+II G ++ +A+ +F + ++ ++P + A L AC+ G + G + +
Sbjct: 467 WTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHV- 524
Query: 466 KDFRIAPGLEHYA--AVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVE 523
R GL+ + A+ D+ R GR+ A+ ++ T W+ LL
Sbjct: 525 --LRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKKDVTS--WNILLTGYSERGQGS 580
Query: 524 LAEKVVDKIL 533
+ ++ D+++
Sbjct: 581 MVVELFDRMV 590
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 160/332 (48%), Gaps = 6/332 (1%)
Query: 210 GNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDG 269
G NG EA+ ++ M + ++ D +++ + +G +++ A+
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 270 DVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQML 329
V +G++ + M+ + + + F + R+ SWN ++ G + G FD+ + + +ML
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 330 -KAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNI 388
VKP +F V+ C + L GK++H ++R G++ + + ++L+ MY KCG++
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 389 KMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTAC 448
K AR +FD++ RD+++W A+I G +G + + LF M V P + +V++AC
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 449 SHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSV 508
G G + ++ A + ++ + AG EA S M + S
Sbjct: 308 ELLGDRRLG-RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS- 365
Query: 509 WSTLLAACRAHKSVELAEKVVDKILLVDPENM 540
W+T+++ ++ L +K +D ++D +++
Sbjct: 366 WTTMIS---GYEYNFLPDKAIDTYRMMDQDSV 394
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 380 bits (976), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/519 (35%), Positives = 304/519 (58%)
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHV 250
+V D +P D+ +++ ++G + G F+E LD++R+ ++ ++ T S L +F+
Sbjct: 192 RVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLR 251
Query: 251 DVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIA 310
D+ +++H +R GF+ +V +LI+MY KC +V ++ R F ++ +I+
Sbjct: 252 DLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMD 311
Query: 311 GCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDD 370
Q+ F++ + F +M +V P + +F+ ++ + A L+ L G LHG +++ G+ +
Sbjct: 312 AYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRN 371
Query: 371 NKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKML 430
+ + ++LV+MYAK G+I+ AR F + RD+V W +I GC+ HG +A+ F++M+
Sbjct: 372 HVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMI 431
Query: 431 EDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRL 490
G P + F+ VL ACSH G V++G YFN + K F + P ++HY + LL +AG
Sbjct: 432 FTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMF 491
Query: 491 EEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIY 550
++A DF+ I+ W TLL AC ++ L +KV + + P + G YVL+SNI+
Sbjct: 492 KDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIH 551
Query: 551 SAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILL 610
+ ++ W+ AK+R M ++G+KK P SWI I N+ H FLA D HP I + ++
Sbjct: 552 AKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVM 611
Query: 611 EQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCV 670
+++ GY D + HDVD+E + D L HSE+LA+A+ V KN+R+C
Sbjct: 612 SKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICD 671
Query: 671 DCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
DCH+AIK ISKI R IV+RD++RFHHF++G CSC DYW
Sbjct: 672 DCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 181/396 (45%), Gaps = 35/396 (8%)
Query: 145 DLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSW 204
D Y N+L+N+Y K + E RK+FDLMP R+VVSW
Sbjct: 68 DAYQINSLINLYVKCR------------------------ETVRARKLFDLMPERNVVSW 103
Query: 205 NTVIAGNAQNGMFREALDMVREMG-DDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAI 263
++ G +G E L + + M + +P+ F + + + + +G + HG +
Sbjct: 104 CAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFL 163
Query: 264 RHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIG 323
++G F+ ++L+ MY+ C+ ++R LPY D ++S ++G ++ G F +G+
Sbjct: 164 KYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLD 223
Query: 324 FFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYA 383
R+ +++ S + ++L LNL Q+H ++R GF+ +L++MY
Sbjct: 224 VLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYG 283
Query: 384 KCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMA 443
KCG + A+ +FD +++ T I+ +A++LF KM V P F
Sbjct: 284 KCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAI 343
Query: 444 VLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYA----AVADLLGRAGRLEEAYDFISN 499
+L + + L+ +G + + G ++ A+ ++ ++G +E+A S
Sbjct: 344 LLNSIAELSLLKQG-----DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSG 398
Query: 500 MGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLV 535
M + + W+T+++ C H A + D+++
Sbjct: 399 MTFRDIVT-WNTMISGCSHHGLGREALEAFDRMIFT 433
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 120/227 (52%), Gaps = 4/227 (1%)
Query: 190 RKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEH 249
++VFD A+++ T++ Q+ F EAL++ +M ++ P+ +T + +L AE
Sbjct: 292 QRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAEL 351
Query: 250 VDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSII 309
+ +G +HG ++ G+ V +G++L++MYAK +E + +AF + +RD ++WN++I
Sbjct: 352 SLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMI 411
Query: 310 AGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFD 369
+GC +G + + F +M+ P +++F V+ AC+H+ + G +++ FD
Sbjct: 412 SGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMK-KFD 470
Query: 370 DNKFIA--SSLVDMYAKCGNIKMARYIFDKIETR-DMVAWTAIIMGC 413
I + +V + +K G K A D+VAW ++ C
Sbjct: 471 VQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNAC 517
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 72/136 (52%), Gaps = 5/136 (3%)
Query: 330 KAKVKPMQVS-FSSVIPACAHLTALNLGKQLHGCII---RLGFDDNKFIASSLVDMYAKC 385
K+K P + + ++ CA+ + L +G+ +H +I + ++ + +SL+++Y KC
Sbjct: 23 KSKKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKC 82
Query: 386 GNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDG-VRPCYVAFMAV 444
AR +FD + R++V+W A++ G G + + LF+ M G RP V
Sbjct: 83 RETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVV 142
Query: 445 LTACSHAGLVDEGWKY 460
+CS++G ++EG ++
Sbjct: 143 FKSCSNSGRIEEGKQF 158
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/575 (36%), Positives = 324/575 (56%), Gaps = 30/575 (5%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G+D ++ +NALM +Y + L + RK+F MP D
Sbjct: 445 GIDLNVSVSNALMTLYAETGYL------------------------NECRKIFSSMPEHD 480
Query: 201 VVSWNTVIAGNAQNGM-FREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
VSWN++I A++ EA+ K + T SS+L + G +IH
Sbjct: 481 QVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIH 540
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFY-LLPYRDAISWNSIIAGCVQNGKF 318
G A+++ + ++LI Y KC ++ + F + RD ++WNS+I+G + N
Sbjct: 541 GLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELL 600
Query: 319 DQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSL 378
+ + ML+ + +++V+ A A + L G ++H C +R + + + S+L
Sbjct: 601 AKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSAL 660
Query: 379 VDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDG-VRPC 437
VDMY+KCG + A F+ + R+ +W ++I G A HG +A+ LFE M DG P
Sbjct: 661 VDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPD 720
Query: 438 YVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFI 497
+V F+ VL+ACSHAGL++EG+K+F SM + +AP +EH++ +AD+LGRAG L++ DFI
Sbjct: 721 HVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFI 780
Query: 498 SNMGIQPTGSVWSTLLAAC-RAH-KSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKR 555
M ++P +W T+L AC RA+ + EL +K + + ++PEN YVL+ N+Y+A R
Sbjct: 781 EKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGR 840
Query: 556 WKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEK 615
W+D K R M+ +KK SW+ + + VH F+AGDKSHP D I + L L +M
Sbjct: 841 WEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRD 900
Query: 616 EGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXX-XRVIKNIRVCVDCHT 674
GYV T L+D++ E K ++L HSE+LA+AF R++KN+RVC DCH+
Sbjct: 901 AGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHS 960
Query: 675 AIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
A K+ISKI GR+I++RD++RFHHF +G+CSC D+W
Sbjct: 961 AFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 167/332 (50%), Gaps = 7/332 (2%)
Query: 190 RKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGD-DKLKPDSFT-LSSILPIF- 246
RKVF+ M R+ V+ N ++ G + EA + +M + P+S+ L S P +
Sbjct: 263 RKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYS 322
Query: 247 -AEHVDVVKGMEIHGYAIRHGF-DGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS 304
AE V + KG E+HG+ I G D V IG+ L++MYAKC + + R FY + +D++S
Sbjct: 323 LAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVS 382
Query: 305 WNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCII 364
WNS+I G QNG F + + ++ M + + P + S + +CA L LG+Q+HG +
Sbjct: 383 WNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESL 442
Query: 365 RLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHAL-DAV 423
+LG D N ++++L+ +YA+ G + R IF + D V+W +II A +L +AV
Sbjct: 443 KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAV 502
Query: 424 SLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADL 483
F G + + F +VL+A S + G K + + IA A+
Sbjct: 503 VCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELG-KQIHGLALKNNIADEATTENALIAC 561
Query: 484 LGRAGRLEEAYDFISNMGIQPTGSVWSTLLAA 515
G+ G ++ S M + W+++++
Sbjct: 562 YGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 189/400 (47%), Gaps = 38/400 (9%)
Query: 142 LDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDV 201
+DF + N L+NMY K + I R+VF M +D
Sbjct: 345 VDFMVGIGNGLVNMYAKCGS------------------------IADARRVFYFMTDKDS 380
Query: 202 VSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGY 261
VSWN++I G QNG F EA++ + M + P SFTL S L A G +IHG
Sbjct: 381 VSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGE 440
Query: 262 AIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGK-FDQ 320
+++ G D +V + ++L+ +YA+ + + F +P D +SWNSII ++ + +
Sbjct: 441 SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPE 500
Query: 321 GIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVD 380
+ F +A K +++FSSV+ A + L+ LGKQ+HG ++ D ++L+
Sbjct: 501 AVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIA 560
Query: 381 MYAKCGNIKMARYIFDKI-ETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYV 439
Y KCG + IF ++ E RD V W ++I G + A+ L ML+ G R
Sbjct: 561 CYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSF 620
Query: 440 AFMAVLTACSHAGLVDEGWKYF-----NSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAY 494
+ VL+A + ++ G + +E D + +A+ D+ + GRL+ A
Sbjct: 621 MYATVLSAFASVATLERGMEVHACSVRACLESDVVVG------SALVDMYSKCGRLDYAL 674
Query: 495 DFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILL 534
F + M ++ + S W+++++ H E A K+ + + L
Sbjct: 675 RFFNTMPVRNSYS-WNSMISGYARHGQGEEALKLFETMKL 713
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 143/293 (48%), Gaps = 29/293 (9%)
Query: 142 LDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDV 201
LD D+Y N L+N Y + + + V S RKVFD MP R+
Sbjct: 32 LDKDVYLCNNLINAYLE--------TGDSV----------------SARKVFDEMPLRNC 67
Query: 202 VSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAE--HVDVVKGMEIH 259
VSW +++G ++NG +EAL +R+M + + + + S+L E V ++ G +IH
Sbjct: 68 VSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIH 127
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKC-NRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKF 318
G + + D + + LI MY KC V ++L AF + ++++SWNSII+ Q G
Sbjct: 128 GLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQ 187
Query: 319 DQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTA--LNLGKQLHGCIIRLGFDDNKFIAS 376
F M +P + +F S++ LT + L +Q+ I + G + F+ S
Sbjct: 188 RSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGS 247
Query: 377 SLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM 429
LV +AK G++ AR +F+++ETR+ V +++G +A LF M
Sbjct: 248 GLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 105/196 (53%), Gaps = 4/196 (2%)
Query: 258 IHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGK 317
H ++ D DV++ ++LI+ Y + + + F +P R+ +SW I++G +NG+
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 318 FDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNL--GKQLHGCIIRLGFDDNKFIA 375
+ + F R M+K + Q +F SV+ AC + ++ + G+Q+HG + +L + + ++
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 376 SSLVDMYAKC-GNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGV 434
+ L+ MY KC G++ A F IE ++ V+W +II + G A +F M DG
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 435 RPCYVAFMA-VLTACS 449
RP F + V TACS
Sbjct: 203 RPTEYTFGSLVTTACS 218
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 53/96 (55%)
Query: 359 LHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGH 418
H + + D + ++ ++L++ Y + G+ AR +FD++ R+ V+W I+ G + +G
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 419 ALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLV 454
+A+ M+++G+ AF++VL AC G V
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/538 (37%), Positives = 310/538 (57%), Gaps = 13/538 (2%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDK-LKPDSFTLSSIL 243
EI++ RK+FD M +VVSW +VI+G G + AL M ++M +D+ + P+ +T +S+
Sbjct: 79 EINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVF 138
Query: 244 PIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAF-YLLPY-RD 301
+ + G IH G ++ + SSL+DMY KCN VE + R F ++ Y R+
Sbjct: 139 KACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRN 198
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKV--KPMQVSFSSVIPACAHLTALNLGKQL 359
+SW S+I QN + + I FR A + Q +SVI AC+ L L GK
Sbjct: 199 VVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVA 258
Query: 360 HGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHA 419
HG + R G++ N +A+SL+DMYAKCG++ A IF +I ++++T++IM A HG
Sbjct: 259 HGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLG 318
Query: 420 LDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAA 479
AV LF++M+ + P YV + VL ACSH+GLV+EG +Y + M + + + P HY
Sbjct: 319 EAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTC 378
Query: 480 VADLLGRAGRLEEAYDFISNM--GIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDP 537
V D+LGR GR++EAY+ + G + +W LL+A R H VE+ + +++ +
Sbjct: 379 VVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQ 438
Query: 538 ENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHP 597
+ AY+ +SN Y+ + W+D+ LR+ M+ G K ACSWIE + V+ F AGD S
Sbjct: 439 QVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCD 498
Query: 598 YYDKINEALNILLEQMEKEGY------VLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXX 651
+I L L ++M++ G+ + +S V DVD+E K +++ H ERLA+A+
Sbjct: 499 ESGEIERFLKDLEKRMKERGHRGSSSMITTSSSVFVDVDEEAKDEMVSLHCERLALAYGL 558
Query: 652 XXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
R++ N+R+C DCH A K IS+IV REIVVRD +RFH F NGSC+C DYW
Sbjct: 559 LHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 105/205 (51%), Gaps = 5/205 (2%)
Query: 258 IHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGK 317
+H ++ GF D F + L+ Y K + + + F + + +SW S+I+G GK
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 318 FDQGIGFFRQMLKAK-VKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIAS 376
+ F++M + + V P + +F+SV AC+ L +GK +H + G N ++S
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 377 SLVDMYAKCGNIKMARYIFDKI--ETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGV 434
SLVDMY KC +++ AR +FD + R++V+WT++I A + +A+ LF
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 435 RPCYVAFM--AVLTACSHAGLVDEG 457
FM +V++ACS G + G
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWG 255
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 15/176 (8%)
Query: 359 LHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGH 418
LH ++LGF + F + LV Y K I AR +FD++ ++V+WT++I G G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 419 ALDAVSLFEKMLED-GVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHY 477
+A+S+F+KM ED V P F +V ACS G +E GL
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLE-----ISGLRRN 165
Query: 478 AAVA----DLLGRAGRLEEAYD-FISNMGIQPTGSVWSTLLAA----CRAHKSVEL 524
V+ D+ G+ +E A F S +G W++++ A R H+++EL
Sbjct: 166 IVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIEL 221
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/561 (35%), Positives = 308/561 (54%), Gaps = 37/561 (6%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
I+ R VFD M RDVV+WNT+I + G+ EA + EM D + PD L +I+
Sbjct: 162 INYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSA 221
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGD-------------------------------VFIG 274
++ I+ + I + D +F+
Sbjct: 222 CGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVS 281
Query: 275 SSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVK 334
++++ Y+KC R++ + F +D + W ++I+ V++ + + F +M + +K
Sbjct: 282 TAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIK 341
Query: 335 PMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYI 394
P VS SVI ACA+L L+ K +H CI G + I ++L++MYAKCG + R +
Sbjct: 342 PDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDV 401
Query: 395 FDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLV 454
F+K+ R++V+W+++I +MHG A DA+SLF +M ++ V P V F+ VL CSH+GLV
Sbjct: 402 FEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLV 461
Query: 455 DEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLA 514
+EG K F SM ++ I P LEHY + DL GRA L EA + I +M + +W +L++
Sbjct: 462 EEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMS 521
Query: 515 ACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKT 574
ACR H +EL + +IL ++P++ GA VLMSNIY+ +RW+D +R M K + K
Sbjct: 522 ACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKE 581
Query: 575 PACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYK 634
S I+ K H FL GDK H ++I L+ ++ +++ GYV D VL DV++E K
Sbjct: 582 KGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEK 641
Query: 635 RDLLRTHSERLAIAFXXXXXXXXXXX------RVIKNIRVCVDCHTAIKFISKIVGREIV 688
+DL+ HSE+LA+ F R++KN+RVC DCH K +SK+ REI+
Sbjct: 642 KDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREII 701
Query: 689 VRDNSRFHHFMNGSCSCGDYW 709
VRD +RFH + NG CSC DYW
Sbjct: 702 VRDRTRFHCYKNGLCSCRDYW 722
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 151/321 (47%), Gaps = 43/321 (13%)
Query: 235 DSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAF 294
D F+ IL ++ + +GME+HG A + D F+ + +DMYA C R+ ++ F
Sbjct: 110 DQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVF 169
Query: 295 YLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAH----- 349
+ +RD ++WN++I + G D+ F +M + V P ++ +++ AC
Sbjct: 170 DEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMR 229
Query: 350 --------------------LTALNLGKQLHGCI------IRLGFDDNKFIASSLVDMYA 383
LTAL GC+ R N F+++++V Y+
Sbjct: 230 YNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYS 289
Query: 384 KCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMA 443
KCG + A+ IFD+ E +D+V WT +I + +A+ +FE+M G++P V+ +
Sbjct: 290 KCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFS 349
Query: 444 VLTACSHAGLVDEG-WK----YFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFIS 498
V++AC++ G++D+ W + N +E + I A+ ++ + G L+ D
Sbjct: 350 VISACANLGILDKAKWVHSCIHVNGLESELSIN------NALINMYAKCGGLDATRDVFE 403
Query: 499 NMGIQPTGSVWSTLLAACRAH 519
M + S WS+++ A H
Sbjct: 404 KMPRRNVVS-WSSMINALSMH 423
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 105/217 (48%), Gaps = 4/217 (1%)
Query: 289 HSLRAFYLLPYR-DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPAC 347
++L F +P ++I +N + ++ + I F++++ + Q SF ++ A
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 348 AHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWT 407
+ ++AL G +LHG ++ + F+ + +DMYA CG I AR +FD++ RD+V W
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWN 181
Query: 408 AIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSM-EK 466
+I G +A LFE+M + V P + +++AC G + + + E
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN 241
Query: 467 DFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQ 503
D R+ L A+ + AG ++ A +F M ++
Sbjct: 242 DVRMDTHL--LTALVTMYAGAGCMDMAREFFRKMSVR 276
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 83/183 (45%), Gaps = 26/183 (14%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
GL+ +L NAL+NMY K GG +D+ R VF+ MP R+
Sbjct: 374 GLESELSINNALINMYAKC---GG---------------------LDATRDVFEKMPRRN 409
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
VVSW+++I + +G +AL + M + ++P+ T +L + V +G +I
Sbjct: 410 VVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFA 469
Query: 261 YAI-RHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPY-RDAISWNSIIAGCVQNGKF 318
+ + ++D++ + N + +L +P + + W S+++ C +G+
Sbjct: 470 SMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGEL 529
Query: 319 DQG 321
+ G
Sbjct: 530 ELG 532
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 377 bits (969), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/550 (36%), Positives = 307/550 (55%), Gaps = 32/550 (5%)
Query: 192 VFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVD 251
+F + ++ +N +I + +A +M ++ PD+ T ++ +E
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 252 VVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAG 311
V+ G + H +R GF DV++ +SL+ MYA C + + R F + +RD +SW S++AG
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAG 192
Query: 312 -----CVQNGK--------------------------FDQGIGFFRQMLKAKVKPMQVSF 340
V+N + F++ I F M + V +
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 341 SSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIET 400
SVI +CAHL AL G++ + +++ N + ++LVDM+ +CG+I+ A ++F+ +
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPE 312
Query: 401 RDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKY 460
D ++W++II G A+HGHA A+ F +M+ G P V F AVL+ACSH GLV++G +
Sbjct: 313 TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEI 372
Query: 461 FNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHK 520
+ +M+KD I P LEHY + D+LGRAG+L EA +FI M ++P + LL AC+ +K
Sbjct: 373 YENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYK 432
Query: 521 SVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWI 580
+ E+AE+V + ++ V PE+ G YVL+SNIY+ A +W LR M+ K +KK P S I
Sbjct: 433 NTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLI 492
Query: 581 EIGNKVHTFLAG-DKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLR 639
EI K++ F G D+ HP KI +L ++ GY +T + DVD+E K +
Sbjct: 493 EIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIH 552
Query: 640 THSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFM 699
HSE+LAIA+ R++KN+RVC DCHT K IS++ GRE++VRD +RFHHF
Sbjct: 553 MHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFR 612
Query: 700 NGSCSCGDYW 709
NG CSC DYW
Sbjct: 613 NGVCSCRDYW 622
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 150/317 (47%), Gaps = 14/317 (4%)
Query: 107 ISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGFG 166
I P FP L+KAS+ G D+Y N+L++MY N G
Sbjct: 113 IWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYA---NCGFIA 169
Query: 167 SANKVFDENPQR---------GKGCKCE-IDSVRKVFDLMPARDVVSWNTVIAGNAQNGM 216
+A ++F + R CKC +++ R++FD MP R++ +W+ +I G A+N
Sbjct: 170 AAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNC 229
Query: 217 FREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSS 276
F +A+D+ M + + + + S++ A + G + Y ++ ++ +G++
Sbjct: 230 FEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTA 289
Query: 277 LIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPM 336
L+DM+ +C +E ++ F LP D++SW+SII G +G + + +F QM+ P
Sbjct: 290 LVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPR 349
Query: 337 QVSFSSVIPACAHLTALNLGKQLHGCIIR-LGFDDNKFIASSLVDMYAKCGNIKMARYIF 395
V+F++V+ AC+H + G +++ + + G + +VDM + G + A
Sbjct: 350 DVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFI 409
Query: 396 DKIETRDMVAWTAIIMG 412
K+ + ++G
Sbjct: 410 LKMHVKPNAPILGALLG 426
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 143/301 (47%), Gaps = 42/301 (13%)
Query: 258 IHGYAIRHGFDGDVFIGSSLIDMYA-------KCNRVEHSLRAFYLLPYRDAISWNSIIA 310
IHG+ +R DVF+ S L+ + N + ++ F + + +N +I
Sbjct: 31 IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIR 90
Query: 311 GCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDD 370
+ + GF+ QMLK+++ P ++F +I A + + + +G+Q H I+R GF +
Sbjct: 91 CFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQN 150
Query: 371 NKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMG---CAM------------ 415
+ ++ +SLV MYA CG I A IF ++ RD+V+WT+++ G C M
Sbjct: 151 DVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMP 210
Query: 416 -----------HGHALD-----AVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWK 459
+G+A + A+ LFE M +GV ++V+++C+H G ++ G +
Sbjct: 211 HRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGER 270
Query: 460 YFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSV-WSTLLAACRA 518
+ + K + L A+ D+ R G +E+A G+ T S+ WS+++
Sbjct: 271 AYEYVVKS-HMTVNLILGTALVDMFWRCGDIEKAIHVFE--GLPETDSLSWSSIIKGLAV 327
Query: 519 H 519
H
Sbjct: 328 H 328
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/543 (35%), Positives = 310/543 (57%), Gaps = 37/543 (6%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
D+ + I + NG+ +A + ++ ++ P+ FT SS+L + G IH
Sbjct: 94 DLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLL----KSCSTKSGKLIH 149
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR------------------- 300
+ ++ G D ++ + L+D+YAK V + + F +P R
Sbjct: 150 THVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVE 209
Query: 301 ------------DAISWNSIIAGCVQNGKFDQGIGFFRQML-KAKVKPMQVSFSSVIPAC 347
D +SWN +I G Q+G + + F+++L + K KP +++ + + AC
Sbjct: 210 AARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSAC 269
Query: 348 AHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWT 407
+ + AL G+ +H + N + + L+DMY+KCG+++ A +F+ +D+VAW
Sbjct: 270 SQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWN 329
Query: 408 AIIMGCAMHGHALDAVSLFEKMLE-DGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEK 466
A+I G AMHG++ DA+ LF +M G++P + F+ L AC+HAGLV+EG + F SM +
Sbjct: 330 AMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQ 389
Query: 467 DFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAE 526
++ I P +EHY + LLGRAG+L+ AY+ I NM + +WS++L +C+ H L +
Sbjct: 390 EYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGK 449
Query: 527 KVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKV 586
++ + ++ ++ +N G YVL+SNIY++ ++ AK+R M+ KG+ K P S IEI NKV
Sbjct: 450 EIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKV 509
Query: 587 HTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLA 646
H F AGD+ H +I L + E+++ GYV +T+ VL D+++ K L+ HSERLA
Sbjct: 510 HEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLA 569
Query: 647 IAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCG 706
IA+ ++ KN+RVC DCHT K ISKI GR+IV+RD +RFHHF +GSCSCG
Sbjct: 570 IAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCG 629
Query: 707 DYW 709
D+W
Sbjct: 630 DFW 632
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 155/328 (47%), Gaps = 27/328 (8%)
Query: 107 ISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGFG 166
I+P F SLLK+ + GL D Y A L+++Y K G
Sbjct: 126 INPNEFTFSSLLKSCSTKSGKLIHTHVLKF----GLGIDPYVATGLVDVYAKG---GDVV 178
Query: 167 SANKVFDENPQRG----------KGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGM 216
SA KVFD P+R + +++ R +FD M RD+VSWN +I G AQ+G
Sbjct: 179 SAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGF 238
Query: 217 FREALDMVRE-MGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGS 275
+AL + ++ + + K KPD T+ + L ++ + G IH + +V + +
Sbjct: 239 PNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCT 298
Query: 276 SLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLK-AKVK 334
LIDMY+KC +E ++ F P +D ++WN++IAG +G + F +M ++
Sbjct: 299 GLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQ 358
Query: 335 PMQVSFSSVIPACAHLTALNLGKQLHGCIIR-LGFDDNKFIASSLVDMYAKCGNIKMARY 393
P ++F + ACAH +N G ++ + + G LV + + G +K A
Sbjct: 359 PTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRA-- 416
Query: 394 IFDKIETRDM----VAWTAIIMGCAMHG 417
++ I+ +M V W++++ C +HG
Sbjct: 417 -YETIKNMNMDADSVLWSSVLGSCKLHG 443
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 144/308 (46%), Gaps = 43/308 (13%)
Query: 247 AEHVDVVKGMEIHGYAIRHGF---DGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAI 303
++ VD V ++IH +RH + L YA ++ HSL F+ D
Sbjct: 39 SQSVDEV--LQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLF 96
Query: 304 SWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCI 363
+ + I NG DQ + Q+L +++ P + +FSS++ +C+ + GK +H +
Sbjct: 97 LFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHV 152
Query: 364 IRLGFDDNKFIASSLVDMYAK---------------------------C----GNIKMAR 392
++ G + ++A+ LVD+YAK C GN++ AR
Sbjct: 153 LKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAAR 212
Query: 393 YIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDG-VRPCYVAFMAVLTACSHA 451
+FD + RD+V+W +I G A HG DA+ LF+K+L +G +P + +A L+ACS
Sbjct: 213 ALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQI 272
Query: 452 GLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWST 511
G ++ G ++ + K RI ++ + D+ + G LEEA + N + W+
Sbjct: 273 GALETG-RWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAV-LVFNDTPRKDIVAWNA 330
Query: 512 LLAACRAH 519
++A H
Sbjct: 331 MIAGYAMH 338
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/613 (33%), Positives = 324/613 (52%), Gaps = 36/613 (5%)
Query: 100 NAMRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKV 159
+ M A G P + +LLK+ GL + ++NMY K
Sbjct: 173 SGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKC 232
Query: 160 QNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFRE 219
L G ++VFD M + V+ ++ G Q G R+
Sbjct: 233 GWLVG------------------------AKRVFDQMAVKKPVACTGLMVGYTQAGRARD 268
Query: 220 ALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLID 279
AL + ++ + ++ DSF S +L A ++ G +IH + G + +V +G+ L+D
Sbjct: 269 ALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVD 328
Query: 280 MYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQ-V 338
Y KC+ E + RAF + + +SW++II+G Q +F++ + F+ + +
Sbjct: 329 FYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSF 388
Query: 339 SFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKI 398
+++S+ AC+ L N+G Q+H I+ +++ S+L+ MY+KCG + A +F+ +
Sbjct: 389 TYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESM 448
Query: 399 ETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGW 458
+ D+VAWTA I G A +G+A +A+ LFEKM+ G++P V F+AVLTACSHAGLV++G
Sbjct: 449 DNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGK 508
Query: 459 KYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRA 518
++M + + +AP ++HY + D+ R+G L+EA F+ NM +P W L+ C
Sbjct: 509 HCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWT 568
Query: 519 HKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACS 578
HK++EL E +++ +DPE+ YVL N+Y+ A +W++AA++ M + LKK +CS
Sbjct: 569 HKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCS 628
Query: 579 WIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLL 638
WI+ K+H F+ GDK HP +I E L ME + + + +E +R+ L
Sbjct: 629 WIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFDGFMEGDMFQCNMTE---------RREQL 679
Query: 639 RTHSERLAIAFXXXXX--XXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFH 696
HSERLAIAF +V KN+R C DCH K +S + G EIV+RD+ RFH
Sbjct: 680 LDHSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFH 739
Query: 697 HFMNGSCSCGDYW 709
HF G CSC DYW
Sbjct: 740 HFKEGKCSCNDYW 752
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 120/234 (51%), Gaps = 2/234 (0%)
Query: 217 FREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDG-DVFIGS 275
EA + ++EM + S++ + E + G +H +R G + V + +
Sbjct: 64 LNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHD-RMRMGIENPSVLLQN 122
Query: 276 SLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKP 335
++ MY +C +E + + F + +A+S ++I+ + G D+ +G F ML + KP
Sbjct: 123 CVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKP 182
Query: 336 MQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIF 395
+++++ + + AL+ G+Q+H +IR G N I + +V+MY KCG + A+ +F
Sbjct: 183 PSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVF 242
Query: 396 DKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACS 449
D++ + VA T +++G G A DA+ LF ++ +GV F VL AC+
Sbjct: 243 DQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACA 296
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 72/142 (50%), Gaps = 2/142 (1%)
Query: 317 KFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDD-NKFIA 375
K ++ F ++M KA V S+ + AC L +L+ G+ LH +R+G ++ + +
Sbjct: 63 KLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHD-RMRMGIENPSVLLQ 121
Query: 376 SSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVR 435
+ ++ MY +C +++ A +FD++ + V+ T +I A G AV LF ML G +
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDK 181
Query: 436 PCYVAFMAVLTACSHAGLVDEG 457
P + +L + + +D G
Sbjct: 182 PPSSMYTTLLKSLVNPRALDFG 203
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/531 (34%), Positives = 313/531 (58%), Gaps = 10/531 (1%)
Query: 186 IDSVRKVFDLMPARDVVS---WNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSI 242
+D RK+FD + +++ W + G ++NG R+AL + +M ++P +F++S
Sbjct: 183 LDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVA 242
Query: 243 LPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDA 302
L + D+ G IH ++ D + + L+ +Y + + + + F + R+
Sbjct: 243 LKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNV 302
Query: 303 ISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGC 362
++WNS+I+ + + + FR+M + + + ++++PAC+ + AL GK++H
Sbjct: 303 VTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQ 362
Query: 363 IIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDA 422
I++ + + +SL+DMY KCG ++ +R +FD + T+D+ +W ++ A++G+ +
Sbjct: 363 ILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEV 422
Query: 423 VSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVAD 482
++LFE M+E GV P + F+A+L+ CS GL + G F M+ +FR++P LEHYA + D
Sbjct: 423 INLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVD 482
Query: 483 LLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGA 542
+LGRAG+++EA I M +P+ S+W +LL +CR H +V + E ++ +++P N G
Sbjct: 483 ILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGN 542
Query: 543 YVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGD----KSHPY 598
YV++SNIY+ AK W + K+R M+ +G+KK CSW+++ +K+ F+AG ++
Sbjct: 543 YVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDE 602
Query: 599 YDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXX 658
Y K+ L E +EK GY +TS VLHDVD+E K + + HSERLA +
Sbjct: 603 YKKVWTELQ---EAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGV 659
Query: 659 XXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
R+ KN+RVC DCH+ +K +S++ R IV+RD RFHHF++G CSC DYW
Sbjct: 660 PIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 72/147 (48%), Gaps = 13/147 (8%)
Query: 183 KC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
KC E++ R+VFD+M +D+ SWN ++ A NG E +++ M + + PD T +
Sbjct: 384 KCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVA 443
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSS------LIDMYAKCNRVEHSLRAFY 295
+L ++ G+ +G ++ + + + L+D+ + +++ +++
Sbjct: 444 LLSGCSD-----TGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIE 498
Query: 296 LLPYRDAIS-WNSIIAGCVQNGKFDQG 321
+P++ + S W S++ C +G G
Sbjct: 499 TMPFKPSASIWGSLLNSCRLHGNVSVG 525
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/527 (36%), Positives = 294/527 (55%), Gaps = 25/527 (4%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M + G+ P F SLL + + + D++ +AL++ Y K +
Sbjct: 331 MISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCR- 389
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
G A +F + +SV DVV + +I+G NG++ ++L
Sbjct: 390 --GVSMAQNIFSQ-----------CNSV----------DVVVFTAMISGYLHNGLYIDSL 426
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMY 281
+M R + K+ P+ TL SILP+ + + G E+HG+ I+ GFD IG ++IDMY
Sbjct: 427 EMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMY 486
Query: 282 AKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFS 341
AKC R+ + F L RD +SWNS+I C Q+ I FRQM + + VS S
Sbjct: 487 AKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSIS 546
Query: 342 SVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR 401
+ + ACA+L + + GK +HG +I+ + + S+L+DMYAKCGN+K A +F ++ +
Sbjct: 547 AALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK 606
Query: 402 DMVAWTAIIMGCAMHGHALDAVSLFEKMLE-DGVRPCYVAFMAVLTACSHAGLVDEGWKY 460
++V+W +II C HG D++ LF +M+E G+RP + F+ ++++C H G VDEG ++
Sbjct: 607 NIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRF 666
Query: 461 FNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHK 520
F SM +D+ I P EHYA V DL GRAGRL EAY+ + +M P VW TLL ACR HK
Sbjct: 667 FRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHK 726
Query: 521 SVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWI 580
+VELAE K++ +DP N G YVL+SN ++ A+ W+ K+R M+ + ++K P SWI
Sbjct: 727 NVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWI 786
Query: 581 EIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLH 627
EI + H F++GD +HP I LN LL ++ EGY+ LH
Sbjct: 787 EINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQPYLPLH 833
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/423 (29%), Positives = 208/423 (49%), Gaps = 32/423 (7%)
Query: 100 NAMRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKV 159
+ MR ISP F +L G+DF+ N+L++MY K
Sbjct: 228 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC 287
Query: 160 QNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFRE 219
G F D K+F +M D V+WN +I+G Q+G+ E
Sbjct: 288 ---GRF---------------------DDASKLFRMMSRADTVTWNCMISGYVQSGLMEE 323
Query: 220 ALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLID 279
+L EM + PD+ T SS+LP ++ ++ +IH Y +RH D+F+ S+LID
Sbjct: 324 SLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALID 383
Query: 280 MYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVS 339
Y KC V + F D + + ++I+G + NG + + FR ++K K+ P +++
Sbjct: 384 AYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEIT 443
Query: 340 FSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIE 399
S++P L AL LG++LHG II+ GFD+ I +++DMYAKCG + +A IF+++
Sbjct: 444 LVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS 503
Query: 400 TRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCY--VAFMAVLTACSHAGLVDEG 457
RD+V+W ++I CA + A+ +F +M G+ CY V+ A L+AC A L E
Sbjct: 504 KRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGI--CYDCVSISAALSAC--ANLPSES 559
Query: 458 W-KYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAAC 516
+ K + +A + + + D+ + G L+ A + M + S W++++AAC
Sbjct: 560 FGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVS-WNSIIAAC 618
Query: 517 RAH 519
H
Sbjct: 619 GNH 621
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 201/419 (47%), Gaps = 34/419 (8%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M G+SP FP L+KA G+D + + A++L+ Y
Sbjct: 129 MLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYL---- 184
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
+ GK ID K+FD + +D V WN ++ G A+ G +
Sbjct: 185 ---------------EYGK-----IDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVI 224
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMY 281
M D++ P++ T +L + A + + G+++HG + G D + I +SL+ MY
Sbjct: 225 KGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMY 284
Query: 282 AKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFS 341
+KC R + + + F ++ D ++WN +I+G VQ+G ++ + FF +M+ + V P ++FS
Sbjct: 285 SKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFS 344
Query: 342 SVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR 401
S++P+ + L KQ+H I+R + F+ S+L+D Y KC + MA+ IF + +
Sbjct: 345 SLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSV 404
Query: 402 DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYF 461
D+V +TA+I G +G +D++ +F +++ + P + +++L + G +
Sbjct: 405 DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGREL- 463
Query: 462 NSMEKDFRIAPGLEHY----AAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAAC 516
F I G ++ AV D+ + GR+ AY+ + + S W++++ C
Sbjct: 464 ----HGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVS-WNSMITRC 517
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 120/247 (48%), Gaps = 2/247 (0%)
Query: 204 WNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAI 263
WN++I+ +NG+ +AL +M + PD T ++ + KG++ +
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVA-LKNFKGIDFLSDTV 164
Query: 264 RH-GFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGI 322
G D + F+ SSLI Y + +++ + F + +D + WN ++ G + G D I
Sbjct: 165 SSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVI 224
Query: 323 GFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMY 382
F M ++ P V+F V+ CA ++LG QLHG ++ G D I +SL+ MY
Sbjct: 225 KGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMY 284
Query: 383 AKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFM 442
+KCG A +F + D V W +I G G ++++ F +M+ GV P + F
Sbjct: 285 SKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFS 344
Query: 443 AVLTACS 449
++L + S
Sbjct: 345 SLLPSVS 351
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 135/310 (43%), Gaps = 35/310 (11%)
Query: 254 KGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAI--SWNSIIAG 311
+G ++H + I + GD + ++ MYA C + FY L R + WNSII+
Sbjct: 53 QGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISS 112
Query: 312 CVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDN 371
V+NG +Q + F+ +ML V P +F ++ AC L L + LG D N
Sbjct: 113 FVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCN 172
Query: 372 KFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLE 431
+F+ASSL+ Y + G I + +FD++ +D V W ++ G A G + F M
Sbjct: 173 EFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRM 232
Query: 432 DGVRPCYVAFMAVLTACSHAGLVDEGWKY----------------------------FNS 463
D + P V F VL+ C+ L+D G + F+
Sbjct: 233 DQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDD 292
Query: 464 MEKDFRIAPGLEHYAAVADLLG--RAGRLEEAYDFISNM---GIQPTGSVWSTLLAACRA 518
K FR+ + + G ++G +EE+ F M G+ P +S+LL +
Sbjct: 293 ASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSK 352
Query: 519 HKSVELAEKV 528
+++E +++
Sbjct: 353 FENLEYCKQI 362
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 84/199 (42%), Gaps = 35/199 (17%)
Query: 340 FSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIE 399
S ++ AC++ L GKQ+H +I + + ++ MYA CG+ +F +++
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 400 TR--DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG 457
R + W +II +G A++ + KML GV P F ++ AC
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACV-------- 149
Query: 458 WKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACR 517
L+++ + D L D +S++G+ V S+L+ A
Sbjct: 150 ---------------ALKNFKGI-DFLS---------DTVSSLGMDCNEFVASSLIKAYL 184
Query: 518 AHKSVELAEKVVDKILLVD 536
+ +++ K+ D++L D
Sbjct: 185 EYGKIDVPSKLFDRVLQKD 203
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/547 (34%), Positives = 304/547 (55%), Gaps = 41/547 (7%)
Query: 204 WNTVIAG---NAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
WN +I N + + + M + ++ PD T +LP F + + G H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAF-----------------YL------- 296
+ G D D F+ +SL++MY+ C + + R F Y
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 297 -------LPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAK-----VKPMQVSFSSVI 344
+P R+ ISW+ +I G V GK+ + + FR+M K V+P + + S+V+
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 345 PACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIET-RDM 403
AC L AL GK +H I + + + + ++L+DMYAKCG+++ A+ +F+ + + +D+
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDV 266
Query: 404 VAWTAIIMGCAMHGHALDAVSLFEKM-LEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFN 462
A++A+I AM+G + LF +M D + P V F+ +L AC H GL++EG YF
Sbjct: 267 KAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFK 326
Query: 463 SMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSV 522
M ++F I P ++HY + DL GR+G ++EA FI++M ++P +W +LL+ R +
Sbjct: 327 MMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDI 386
Query: 523 ELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEI 582
+ E + +++ +DP N GAYVL+SN+Y+ RW + +R M KG+ K P CS++E+
Sbjct: 387 KTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEV 446
Query: 583 GNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHS 642
VH F+ GD+S ++I L+ +++++ + GYV DT EVL D++++ K L HS
Sbjct: 447 EGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHS 506
Query: 643 ERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGS 702
E+LAIAF R+IKN+R+C DCH +K ISK+ REIVVRD +RFHHF +GS
Sbjct: 507 EKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGS 566
Query: 703 CSCGDYW 709
CSC D+W
Sbjct: 567 CSCRDFW 573
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 164/349 (46%), Gaps = 22/349 (6%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
MR +SP H FP LL + GLD D + +L+NMY +
Sbjct: 53 MRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMY---SS 109
Query: 162 LGGFGSANKVFDENPQR----------GKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGN 211
G SA +VFD++ + ID RK+FD MP R+V+SW+ +I G
Sbjct: 110 CGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGY 169
Query: 212 AQNGMFREALDMVREMGDDK-----LKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHG 266
G ++EALD+ REM K ++P+ FT+S++L + +G +H Y ++
Sbjct: 170 VMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYH 229
Query: 267 FDGDVFIGSSLIDMYAKCNRVEHSLRAFYLL-PYRDAISWNSIIAGCVQNGKFDQGIGFF 325
+ D+ +G++LIDMYAKC +E + R F L +D +++++I G D+ F
Sbjct: 230 VEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLF 289
Query: 326 RQMLKA-KVKPMQVSFSSVIPACAHLTALNLGKQLHGCII-RLGFDDNKFIASSLVDMYA 383
+M + + P V+F ++ AC H +N GK +I G + +VD+Y
Sbjct: 290 SEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYG 349
Query: 384 KCGNIKMAR-YIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLE 431
+ G IK A +I D++ W +++ G M G ++++E
Sbjct: 350 RSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIE 398
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 113/252 (44%), Gaps = 40/252 (15%)
Query: 301 DAISWNSIIAGCVQNGKFDQ---GIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGK 357
++ WN II V N Q I + +M +V P +F ++P+ + L LG+
Sbjct: 23 ESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 358 QLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKM--------------------------- 390
+ H I+ G D + F+ +SL++MY+ CG+++
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 391 ----ARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKML-----EDGVRPCYVAF 441
AR +FD++ R++++W+ +I G M G +A+ LF +M E VRP
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 442 MAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMG 501
VL+AC G +++G K+ ++ + + + A+ D+ + G LE A + +G
Sbjct: 203 STVLSACGRLGALEQG-KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 261
Query: 502 IQPTGSVWSTLL 513
+ +S ++
Sbjct: 262 SKKDVKAYSAMI 273
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/511 (36%), Positives = 292/511 (57%), Gaps = 6/511 (1%)
Query: 205 NTVIAGNAQNGMFREALDMVREMG-DDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAI 263
NT+I + + E + R + + L + + S L + D++ G++IHG
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIF 140
Query: 264 RHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIG 323
GF D + ++L+D+Y+ C + + F +P RD +SWN + + ++N + +
Sbjct: 141 SDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLV 200
Query: 324 FFRQM---LKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVD 380
F +M + VKP V+ + ACA+L AL+ GKQ+H I G ++++LV
Sbjct: 201 LFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVS 260
Query: 381 MYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVA 440
MY++CG++ A +F + R++V+WTA+I G AM+G +A+ F +ML+ G+ P
Sbjct: 261 MYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQT 320
Query: 441 FMAVLTACSHAGLVDEGWKYFNSMEK-DFRIAPGLEHYAAVADLLGRAGRLEEAYDFISN 499
+L+ACSH+GLV EG +F+ M +F+I P L HY V DLLGRA L++AY I +
Sbjct: 321 LTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKS 380
Query: 500 MGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDA 559
M ++P ++W TLL ACR H VEL E+V+ ++ + E G YVL+ N YS +W+
Sbjct: 381 MEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKV 440
Query: 560 AKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYV 619
+LR M+ K + P CS IE+ VH F+ D SHP ++I + L + +Q++ GYV
Sbjct: 441 TELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYV 500
Query: 620 LDTSEVLHDVDDEYKRDL-LRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKF 678
+ + LH+++ E ++ LR HSE+LAIAF RV KN+R CVDCH KF
Sbjct: 501 AEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKF 560
Query: 679 ISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
+S + R ++VRD SRFHHF GSCSC D+W
Sbjct: 561 VSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 113/234 (48%), Gaps = 8/234 (3%)
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDK---LKPDSFTLSSILPIFA 247
KVFD +P RD VSWN + + +N R+ L + +M +D +KPD T L A
Sbjct: 169 KVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACA 228
Query: 248 EHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNS 307
+ G ++H + +G G + + ++L+ MY++C ++ + + FY + R+ +SW +
Sbjct: 229 NLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTA 288
Query: 308 IIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLG 367
+I+G NG + I F +MLK + P + + + ++ AC+H + G +R G
Sbjct: 289 LISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFD-RMRSG 347
Query: 368 ---FDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR-DMVAWTAIIMGCAMHG 417
N +VD+ + + A + +E + D W ++ C +HG
Sbjct: 348 EFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHG 401
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/534 (35%), Positives = 302/534 (56%), Gaps = 67/534 (12%)
Query: 145 DLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSW 204
D+Y +AL++MY K N ++ ++VFD M R+VVSW
Sbjct: 186 DVYIGSALVDMYSKCGN------------------------VNDAQRVFDEMGDRNVVSW 221
Query: 205 NTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIR 264
N++I QNG EALD+ + M + +++PD TL+S++ A + G E+HG ++
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
Query: 265 HG-FDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAI-------------------- 303
+ D+ + ++ +DMYAKC+R++ + F +P R+ I
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARL 341
Query: 304 -----------SWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTA 352
SWN++IAG QNG+ ++ + F + + V P SF++++ ACA L
Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAE 401
Query: 353 LNLGKQLHGCIIRLGF------DDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAW 406
L+LG Q H +++ GF +D+ F+ +SL+DMY KCG ++ +F K+ RD V+W
Sbjct: 402 LHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSW 461
Query: 407 TAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEK 466
A+I+G A +G+ +A+ LF +MLE G +P ++ + VL+AC HAG V+EG YF+SM +
Sbjct: 462 NAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTR 521
Query: 467 DFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAE 526
DF +AP +HY + DLLGRAG LEEA I M +QP +W +LLAAC+ H+++ L +
Sbjct: 522 DFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGK 581
Query: 527 KVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKV 586
V +K+L V+P N G YVL+SN+Y+ +W+D +R MR +G+ K P CSWI+I
Sbjct: 582 YVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHD 641
Query: 587 HTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEV--LHDVDDEYKRDLL 638
H F+ DKSHP +I+ L+IL+ +M E D +E+ L + +Y +LL
Sbjct: 642 HVFMVKDKSHPRKKQIHSLLDILIAEMRPEQ---DHTEIGSLSSEEMDYSSNLL 692
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 201/407 (49%), Gaps = 62/407 (15%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQR----------GKGCKCEIDSVR 190
G +++ N L++ Y K G +VFD+ PQR G +D
Sbjct: 50 GFSNEIFIQNRLIDAYSKC---GSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEAD 106
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHV 250
+F MP RD +WN++++G AQ+ EAL M + + ++ +S+L +
Sbjct: 107 SLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLN 166
Query: 251 DVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIA 310
D+ KG+++H + F DV+IGS+L+DMY+KC V + R F + R+ +SWNS+I
Sbjct: 167 DMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLIT 226
Query: 311 GCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDD 370
QNG + + F+ ML+++V+P +V+ +SVI ACA L+A+ +G+++HG +++
Sbjct: 227 CFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLR 286
Query: 371 NKFIAS-SLVDMYAKCGNIKMARYIFD-------------------------------KI 398
N I S + VDMYAKC IK AR+IFD K+
Sbjct: 287 NDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKM 346
Query: 399 ETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTAC---------- 448
R++V+W A+I G +G +A+SLF + + V P + +F +L AC
Sbjct: 347 AERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGM 406
Query: 449 -SHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAY 494
+H ++ G+K+ + E D + L D+ + G +EE Y
Sbjct: 407 QAHVHVLKHGFKFQSGEEDDIFVGNSL------IDMYVKCGCVEEGY 447
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 143/277 (51%), Gaps = 31/277 (11%)
Query: 258 IHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAF----------------------Y 295
+H I+ GF ++FI + LID Y+KC +E + F +
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 296 L---------LPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPA 346
L +P RD +WNS+++G Q+ + ++ + +F M K + SF+SV+ A
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 347 CAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAW 406
C+ L +N G Q+H I + F + +I S+LVDMY+KCGN+ A+ +FD++ R++V+W
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 407 TAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEK 466
++I +G A++A+ +F+ MLE V P V +V++AC+ + G + + K
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
Query: 467 DFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQ 503
+ ++ + A D+ + R++EA +M I+
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 42/211 (19%)
Query: 340 FSSVIPAC--AHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDK 397
F+ ++ +C + L+A+ + + +H +I+ GF + FI + L+D Y+KCG+++ R +FDK
Sbjct: 22 FAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDK 80
Query: 398 IETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLE----------DGVRP--------CYV 439
+ R++ W +++ G G +A SLF M E G CY
Sbjct: 81 MPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYF 140
Query: 440 AFM-------------AVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHY---AAVADL 483
A M +VL+ACS +++G + + + K +P L +A+ D+
Sbjct: 141 AMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAK----SPFLSDVYIGSALVDM 196
Query: 484 LGRAGRLEEAYDFISNMGIQPTGSVWSTLLA 514
+ G + +A MG + S W++L+
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVS-WNSLIT 226
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 88/222 (39%), Gaps = 48/222 (21%)
Query: 107 ISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDF------DLYTANALMNMYCKVQ 160
+ PT + F ++LKA G F D++ N+L++MY K
Sbjct: 382 VCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVK-- 439
Query: 161 NLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREA 220
C C ++ VF M RD VSWN +I G AQNG EA
Sbjct: 440 ---------------------CGC-VEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEA 477
Query: 221 LDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDG---DVFIG--- 274
L++ REM + KPD T+ +L V +G RH F D +
Sbjct: 478 LELFREMLESGEKPDHITMIGVLSACGHAGFVEEG--------RHYFSSMTRDFGVAPLR 529
Query: 275 ---SSLIDMYAKCNRVEHSLRAFYLLPYR-DAISWNSIIAGC 312
+ ++D+ + +E + +P + D++ W S++A C
Sbjct: 530 DHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAAC 571
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 357 bits (917), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 189/608 (31%), Positives = 313/608 (51%), Gaps = 55/608 (9%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M+ G+ P+ SLL+A L +D+Y L++MY K
Sbjct: 216 MQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGY 275
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
L R VFD+M A+++V+WN++++G + + ++A
Sbjct: 276 L------------------------PYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAE 311
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMY 281
++ M + +KPD+ T +S+ +A K +++ G G +V
Sbjct: 312 ALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNV---------- 361
Query: 282 AKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFS 341
+SW +I +GC +NG F + F +M + V P + S
Sbjct: 362 ---------------------VSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMS 400
Query: 342 SVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR 401
+++ L+ L+ GK++HG +R + ++A++LVDMY K G+++ A IF I+ +
Sbjct: 401 TLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNK 460
Query: 402 DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYF 461
+ +W ++MG AM G + ++ F MLE G+ P + F +VL+ C ++GLV EGWKYF
Sbjct: 461 SLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYF 520
Query: 462 NSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKS 521
+ M + I P +EH + + DLLGR+G L+EA+DFI M ++P ++W L++C+ H+
Sbjct: 521 DLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRD 580
Query: 522 VELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIE 581
+ELAE ++ +++P N Y++M N+YS RW+D ++R MR+ ++ SWI+
Sbjct: 581 LELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQ 640
Query: 582 IGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTH 641
I VH F A K+HP I L L+ +M+K GYV DTS + D+ D K LL H
Sbjct: 641 IDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGH 700
Query: 642 SERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNG 701
+E+LA+ + RV+KN +C D HT K++S + REIV+++ +R HHF +G
Sbjct: 701 TEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDG 760
Query: 702 SCSCGDYW 709
CSC D W
Sbjct: 761 KCSCNDSW 768
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 175/361 (48%), Gaps = 39/361 (10%)
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHV 250
K+FD MP RD ++WN ++ N ++G + +A+++ REM K T+ +L + +
Sbjct: 44 KLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKE 103
Query: 251 DVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIA 310
+G +IHGY +R G + +V + +SLI MY++ ++E S + F + R+ SWNSI++
Sbjct: 104 GFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILS 163
Query: 311 GCVQNGKFDQGIGF-----------------------------------FRQMLKAKVKP 335
+ G D IG ++M A +KP
Sbjct: 164 SYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKP 223
Query: 336 MQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIF 395
S SS++ A A L LGK +HG I+R + ++ ++L+DMY K G + AR +F
Sbjct: 224 STSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVF 283
Query: 396 DKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVD 455
D ++ +++VAW +++ G + DA +L +M ++G++P + + ++ + + G +
Sbjct: 284 DMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPE 343
Query: 456 EGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM---GIQPTGSVWSTL 512
+ M K+ +AP + + A+ + G A M G+ P + STL
Sbjct: 344 KALDVIGKM-KEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTL 402
Query: 513 L 513
L
Sbjct: 403 L 403
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 173/354 (48%), Gaps = 9/354 (2%)
Query: 255 GMEIHGYAIRHGFD-GDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCV 313
G+ IHG I+ G D D + S+ + Y +C + + + F +P RD ++WN I+ +
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 314 QNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKF 373
++G +++ + FR+M + K + ++ C++ G+Q+HG ++RLG + N
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 374 IASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDG 433
+ +SL+ MY++ G ++++R +F+ ++ R++ +W +I+ G+ DA+ L ++M G
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 434 VRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRL--- 490
++P V + ++L+ + GL + M+ + P +++ + G L
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIA-GLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 491 EEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIY 550
+ + +I + V +TL+ + A V D ++D +N+ A+ + +
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFD---MMDAKNIVAWNSLVSGL 301
Query: 551 SAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINE 604
S A KDA L I M +G+ K A +W + + T +K+ K+ E
Sbjct: 302 SYACLLKDAEALMIRMEKEGI-KPDAITWNSLASGYATLGKPEKALDVIGKMKE 354
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 134/286 (46%), Gaps = 35/286 (12%)
Query: 355 LGKQLHGCIIRLGFD--DNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMG 412
LG +HG +I+ G D D + +++S+ Y +C ++ A +FD++ RD +AW I+M
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASM-GFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMV 63
Query: 413 CAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAP 472
G+ AV LF +M G + + +L CS+ EG + + +
Sbjct: 64 NLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHG-----YVLRL 118
Query: 473 GLEHYAAVADLL----GRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKV 528
GLE ++ + L R G+LE + ++M + S W+++L++ V+ A +
Sbjct: 119 GLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSS-WNSILSSYTKLGYVDDAIGL 177
Query: 529 VDKILL--VDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWI------ 580
+D++ + + P+ + L+S Y++ KDA + M+ GLK P+ S I
Sbjct: 178 LDEMEICGLKPDIVTWNSLLSG-YASKGLSKDAIAVLKRMQIAGLK--PSTSSISSLLQA 234
Query: 581 -------EIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYV 619
++G +H ++ ++ +YD E L++ K GY+
Sbjct: 235 VAEPGHLKLGKAIHGYIL--RNQLWYDVYVET--TLIDMYIKTGYL 276
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 357 bits (916), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 192/556 (34%), Positives = 296/556 (53%), Gaps = 22/556 (3%)
Query: 156 YCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAG-NAQN 214
+C V G A +FD FD P+ WN +I G + +
Sbjct: 46 FCAVSVTGSLSHAQLLFDH------------------FDSDPSTS--DWNYLIRGFSNSS 85
Query: 215 GMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIG 274
L R + +PD FT + L + K +EIHG IR GF D +
Sbjct: 86 SPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVA 145
Query: 275 SSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVK 334
+SL+ Y+ VE + + F +P RD +SWN +I G +Q + +++M V
Sbjct: 146 TSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVC 205
Query: 335 PMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYI 394
+ +++ +CAH++ALN+G LH + + F++++L+DMYAKCG+++ A +
Sbjct: 206 GDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGV 265
Query: 395 FDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLV 454
F+ + RD++ W ++I+G +HGH ++A+S F KM+ GVRP + F+ +L CSH GLV
Sbjct: 266 FNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLV 325
Query: 455 DEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLA 514
EG ++F M F + P ++HY + DL GRAG+LE + + I +W TLL
Sbjct: 326 KEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLG 385
Query: 515 ACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKT 574
+C+ H+++EL E + K++ ++ N G YVLM++IYSAA + A +R +RS L+
Sbjct: 386 SCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTV 445
Query: 575 PACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGY-VLDTSEVLHDVDDEY 633
P SWIEIG++VH F+ DK HP I L ++ + GY D++ + D
Sbjct: 446 PGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPEDSNRTAPTLSDRC 505
Query: 634 KRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNS 693
+HSE+LAIA+ R+ KN+RVC DCH+ K++SK REI+VRD
Sbjct: 506 LGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRV 565
Query: 694 RFHHFMNGSCSCGDYW 709
RFHHF +G CSC DYW
Sbjct: 566 RFHHFADGICSCNDYW 581
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 28/170 (16%)
Query: 146 LYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWN 205
++ +NAL++MY K +L ++ VF+ M RDV++WN
Sbjct: 243 VFVSNALIDMYAKCGSL------------------------ENAIGVFNGMRKRDVLTWN 278
Query: 206 TVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRH 265
++I G +G EA+ R+M ++P++ T +L + H +VK H +
Sbjct: 279 SMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLL-LGCSHQGLVKEGVEHFEIMSS 337
Query: 266 GF--DGDVFIGSSLIDMYAKCNRVEHSLRAFYLLP-YRDAISWNSIIAGC 312
F +V ++D+Y + ++E+SL Y + D + W +++ C
Sbjct: 338 QFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSC 387
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 349 bits (895), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 170/411 (41%), Positives = 256/411 (62%), Gaps = 4/411 (0%)
Query: 300 RDAISWNSIIAGCVQNGKFDQGIGFFRQMLK-AKVKPMQVSFSSVIPACAHLTALNLGKQ 358
++ I+WN +I G V+N ++++ + + ML +KP + SF+S + ACA L L+ K
Sbjct: 127 QNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKW 186
Query: 359 LHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGH 418
+H +I G + N ++S+LVD+YAKCG+I +R +F ++ D+ W A+I G A HG
Sbjct: 187 VHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGL 246
Query: 419 ALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYA 478
A +A+ +F +M + V P + F+ +LT CSH GL++EG +YF M + F I P LEHY
Sbjct: 247 ATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYG 306
Query: 479 AVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPE 538
A+ DLLGRAGR++EAY+ I +M I+P +W +LL++ R +K+ EL E + +
Sbjct: 307 AMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNL---SKA 363
Query: 539 NMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPY 598
G YVL+SNIYS+ K+W+ A K+R M +G++K SW+E G +H F AGD SH
Sbjct: 364 KSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIE 423
Query: 599 YDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXX 658
I + L L+++ + +G+V DT VL DV +E K + L HSE+LA+A+
Sbjct: 424 TKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGT 483
Query: 659 XXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
R+ KNIR+C DCH IK +SK++ R I++RD RFH F +G CSC DYW
Sbjct: 484 EIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 108/224 (48%), Gaps = 3/224 (1%)
Query: 190 RKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGD-DKLKPDSFTLSSILPIFAE 248
+KV ++V++WN +I G +N + EAL ++ M +KP+ F+ +S L A
Sbjct: 118 KKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACAR 177
Query: 249 HVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSI 308
D+ +H I G + + + S+L+D+YAKC + S FY + D WN++
Sbjct: 178 LGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAM 237
Query: 309 IAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGF 368
I G +G + I F +M V P ++F ++ C+H L GK+ G + R
Sbjct: 238 ITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFS 297
Query: 369 DDNKFI-ASSLVDMYAKCGNIKMARYIFDKIETR-DMVAWTAII 410
K ++VD+ + G +K A + + + D+V W +++
Sbjct: 298 IQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 84/213 (39%), Gaps = 26/213 (12%)
Query: 100 NAMRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKV 159
N + I P + F S L A G++ + ++AL+++Y K
Sbjct: 154 NMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKC 213
Query: 160 QNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFRE 219
++G + R+VF + DV WN +I G A +G+ E
Sbjct: 214 GDIG------------------------TSREVFYSVKRNDVSIWNAMITGFATHGLATE 249
Query: 220 ALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGY-AIRHGFDGDVFIGSSLI 278
A+ + EM + + PDS T +L + + +G E G + R + +++
Sbjct: 250 AIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMV 309
Query: 279 DMYAKCNRVEHSLRAFYLLPYR-DAISWNSIIA 310
D+ + RV+ + +P D + W S+++
Sbjct: 310 DLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 347 bits (891), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 191/608 (31%), Positives = 314/608 (51%), Gaps = 59/608 (9%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M LG+ P R FP +LK+++ +D D + +L++MY K
Sbjct: 117 MLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKT-- 174
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
G A +VF+E+P R K ++ WN +I G + A
Sbjct: 175 -GQLKHAFQVFEESPDRIK-----------------KESILIWNVLINGYCRAKDMHMAT 216
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMY 281
+ R M P+ + S S+LI Y
Sbjct: 217 TLFRSM------PERNSGS---------------------------------WSTLIKGY 237
Query: 282 AKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFS 341
+ + + F L+P ++ +SW ++I G Q G ++ I + +ML+ +KP + + +
Sbjct: 238 VDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIA 297
Query: 342 SVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR 401
+V+ AC+ AL G ++HG I+ G ++ I ++LVDMYAKCG + A +F + +
Sbjct: 298 AVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK 357
Query: 402 DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYF 461
D+++WTA+I G A+HG A+ F +M+ G +P V F+AVLTAC ++ VD G +F
Sbjct: 358 DILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFF 417
Query: 462 NSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKS 521
+SM D+ I P L+HY V DLLGRAG+L EA++ + NM I P + W+ L AC+AHK
Sbjct: 418 DSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKG 477
Query: 522 VELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIE 581
AE V +L +DPE G+Y+ + +++ +D K R+ ++ + +++ S+IE
Sbjct: 478 YRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIE 537
Query: 582 IGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTH 641
+ +++ F AGD SH +I L+ ++ ++GY +HD+++E K ++ H
Sbjct: 538 LDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSIHDIEEEEKENVTGIH 597
Query: 642 SERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNG 701
SE+LA+ R+IKN+R+C DCH+ +K++SKI R+I++RD +FHHF +G
Sbjct: 598 SEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDG 657
Query: 702 SCSCGDYW 709
CSCGDYW
Sbjct: 658 RCSCGDYW 665
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 162/447 (36%), Gaps = 119/447 (26%)
Query: 228 GDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRV 287
D + PD S + + D +H +R G + + L+ +
Sbjct: 21 ADRQASPDE---SHFISLIHACKDTASLRHVHAQILRRGVLSSR-VAAQLVSCSSLLKSP 76
Query: 288 EHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPAC 347
++SL F R+ N++I G +N +F+ + F ML+ VKP +++F V+ +
Sbjct: 77 DYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSN 136
Query: 348 AHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIK------------------ 389
+ L LG+ LH ++ D + F+ SLVDMYAK G +K
Sbjct: 137 SKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESI 196
Query: 390 -----------------MARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFE----- 427
MA +F + R+ +W+ +I G G A LFE
Sbjct: 197 LIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEK 256
Query: 428 --------------------------KMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYF 461
+MLE G++P AVL+ACS +G + G +
Sbjct: 257 NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIH 316
Query: 462 -----NSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM---------------- 500
N ++ D I A+ D+ + G L+ A SNM
Sbjct: 317 GYILDNGIKLDRAIG------TALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWA 370
Query: 501 ------------------GIQPTGSVWSTLLAACRAHKSVELAEKVVDKILL---VDPEN 539
G +P V+ +L AC V+L D + L ++P
Sbjct: 371 VHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEP-T 429
Query: 540 MGAYVLMSNIYSAAKRWKDAAKLRIHM 566
+ YVL+ ++ A + +A +L +M
Sbjct: 430 LKHYVLVVDLLGRAGKLNEAHELVENM 456
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 337 bits (864), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 174/494 (35%), Positives = 279/494 (56%), Gaps = 46/494 (9%)
Query: 142 LDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDV 201
L D+ ANA ++MY K Q L A +VFDE M RD
Sbjct: 413 LSLDVCVANAAIDMYGKCQALA---EAFRVFDE---------------------MRRRDA 448
Query: 202 VSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGY 261
VSWN +IA + QNG E L + M +++PD FT SIL + GMEIH
Sbjct: 449 VSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA-CTGGSLGYGMEIHSS 507
Query: 262 AIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD-------------------- 301
++ G + +G SLIDMY+KC +E + + R
Sbjct: 508 IVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEM 567
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
+SWNSII+G V + + F +M++ + P + ++++V+ CA+L + LGKQ+H
Sbjct: 568 CVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHA 627
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALD 421
+I+ + +I S+LVDMY+KCG++ +R +F+K RD V W A+I G A HG +
Sbjct: 628 QVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEE 687
Query: 422 AVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVA 481
A+ LFE+M+ + ++P +V F+++L AC+H GL+D+G +YF M++D+ + P L HY+ +
Sbjct: 688 AIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMV 747
Query: 482 DLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHK-SVELAEKVVDKILLVDPENM 540
D+LG++G+++ A + I M + +W TLL C H+ +VE+AE+ +L +DP++
Sbjct: 748 DILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDS 807
Query: 541 GAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYD 600
AY L+SN+Y+ A W+ + LR +MR LKK P CSW+E+ +++H FL GDK+HP ++
Sbjct: 808 SAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWE 867
Query: 601 KINEALNILLEQME 614
+I E L ++ +M+
Sbjct: 868 EIYEELGLIYSEMK 881
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 204/384 (53%), Gaps = 25/384 (6%)
Query: 147 YTANALMNMYCKVQNLGGFGSANKVFDENPQR----------GKGCKCEIDSVRKVFDLM 196
+ N L+ +Y ++ F SA+ VFD+ P R G ++ F++M
Sbjct: 84 FVLNCLLQVYTNSRD---FVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMM 140
Query: 197 PARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGM 256
P RDVVSWN++++G QNG +++++ +MG + ++ D T + IL + + D GM
Sbjct: 141 PVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGM 200
Query: 257 EIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNG 316
+IHG +R G D DV S+L+DMYAK R SLR F +P ++++SW++IIAGCVQN
Sbjct: 201 QIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNN 260
Query: 317 KFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIAS 376
+ FF++M K Q ++SV+ +CA L+ L LG QLH ++ F + + +
Sbjct: 261 LLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRT 320
Query: 377 SLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRP 436
+ +DMYAKC N++ A+ +FD E + ++ A+I G + H A+ LF +++ G+
Sbjct: 321 ATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGF 380
Query: 437 CYVAFMAVLTACSHAGLVDEGWKYF-----NSMEKDFRIAPGLEHYAAVADLLGRAGRLE 491
++ V AC+ + EG + + +S+ D +A A D+ G+ L
Sbjct: 381 DEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVAN------AAIDMYGKCQALA 434
Query: 492 EAYDFISNMGIQPTGSVWSTLLAA 515
EA+ M + S W+ ++AA
Sbjct: 435 EAFRVFDEMRRRDAVS-WNAIIAA 457
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 150/295 (50%), Gaps = 25/295 (8%)
Query: 183 KCE-IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
KC+ + + +FD + S+N +I G +Q +AL + + L D +LS
Sbjct: 328 KCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSG 387
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
+ A + +G++I+G AI+ DV + ++ IDMY KC + + R F + RD
Sbjct: 388 VFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRD 447
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
A+SWN+IIA QNGK + + F ML+++++P + +F S++ AC +L G ++H
Sbjct: 448 AVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHS 506
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYI----------------FDKIETRDM-- 403
I++ G N + SL+DMY+KCG I+ A I +K+ + +
Sbjct: 507 SIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQE 566
Query: 404 --VAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSH---AGL 453
V+W +II G M + DA LF +M+E G+ P + VL C++ AGL
Sbjct: 567 MCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGL 621
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 171/353 (48%), Gaps = 26/353 (7%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G D D+ A+AL++MY K + ++S+R VF +P ++
Sbjct: 210 GCDTDVVAASALLDMYAKGKRF-----------------------VESLR-VFQGIPEKN 245
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
VSW+ +IAG QN + AL +EM +S+L A ++ G ++H
Sbjct: 246 SVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHA 305
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQ 320
+A++ F D + ++ +DMYAKC+ ++ + F + S+N++I G Q +
Sbjct: 306 HALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFK 365
Query: 321 GIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVD 380
+ F +++ + + ++S S V ACA + L+ G Q++G I+ + +A++ +D
Sbjct: 366 ALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAID 425
Query: 381 MYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVA 440
MY KC + A +FD++ RD V+W AII +G + + LF ML + P
Sbjct: 426 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 485
Query: 441 FMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEA 493
F ++L AC+ G + G + +S+ K +A ++ D+ + G +EEA
Sbjct: 486 FGSILKACT-GGSLGYGMEIHSSIVKS-GMASNSSVGCSLIDMYSKCGMIEEA 536
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 142/312 (45%), Gaps = 7/312 (2%)
Query: 107 ISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGFG 166
I P F S+LKA T G+ + +L++MY K G
Sbjct: 479 IEPDEFTFGSILKACTGGSLGYGMEIHSSIVKS-GMASNSSVGCSLIDMYSKC---GMIE 534
Query: 167 SANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVRE 226
A K+ QR ++ + K+ + VSWN++I+G +A +
Sbjct: 535 EAEKIHSRFFQRAN-VSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTR 593
Query: 227 MGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNR 286
M + + PD FT +++L A G +IH I+ DV+I S+L+DMY+KC
Sbjct: 594 MMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGD 653
Query: 287 VEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPA 346
+ S F RD ++WN++I G +GK ++ I F +M+ +KP V+F S++ A
Sbjct: 654 LHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRA 713
Query: 347 CAHLTALNLGKQLHGCIIR-LGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR-DMV 404
CAH+ ++ G + + R G D S++VD+ K G +K A + ++ D V
Sbjct: 714 CAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDV 773
Query: 405 AWTAIIMGCAMH 416
W ++ C +H
Sbjct: 774 IWRTLLGVCTIH 785
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 108/282 (38%), Gaps = 42/282 (14%)
Query: 289 HSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACA 348
SLR ++ R +S+N + + + +F L +FS V CA
Sbjct: 3 ESLRLLHMT--RSVVSFNRCLTEKISYRRV-PSFSYFTDFLNQVNSVSTTNFSFVFKECA 59
Query: 349 HLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTA 408
AL LGKQ H +I GF F+ + L+ +Y + A +FDK+ RD+V+W
Sbjct: 60 KQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNK 119
Query: 409 IIMGCA-------------------------------MHGHALDAVSLFEKMLEDGVRPC 437
+I G + +G +L ++ +F M +G+
Sbjct: 120 MINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFD 179
Query: 438 YVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVA--DLLGRAGRLEEAYD 495
F +L CS G + + R+ + AA A D+ + R E+
Sbjct: 180 GRTFAIILKVCSFLEDTSLGMQIHGIV---VRVGCDTDVVAASALLDMYAKGKRFVESLR 236
Query: 496 FISNMGIQPTGSV-WSTLLAACRAHKSVELAEKVVDKILLVD 536
GI SV WS ++A C + + LA K ++ V+
Sbjct: 237 VFQ--GIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVN 276
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 337 bits (863), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 167/434 (38%), Positives = 265/434 (61%), Gaps = 5/434 (1%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
++S R+VFD + D SWN +IAG A NG EA+ + +M PD+ +L S+L
Sbjct: 321 LNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCA 380
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR---DA 302
+ + + +GM+IH Y I+ GF D+ + +SL+ MY C+ + F +R D+
Sbjct: 381 QTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFE--DFRNNADS 438
Query: 303 ISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGC 362
+SWN+I+ C+Q+ + + + F+ ML ++ +P ++ +++ C +++L LG Q+H
Sbjct: 439 VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY 498
Query: 363 IIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDA 422
++ G +FI + L+DMYAKCG++ AR IFD ++ RD+V+W+ +I+G A G +A
Sbjct: 499 SLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEA 558
Query: 423 VSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVAD 482
+ LF++M G+ P +V F+ VLTACSH GLV+EG K + +M+ + I+P EH + V D
Sbjct: 559 LILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVD 618
Query: 483 LLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGA 542
LL RAGRL EA FI M ++P VW TLL+AC+ +V LA+K + IL +DP N A
Sbjct: 619 LLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTA 678
Query: 543 YVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKI 602
+VL+ ++++++ W++AA LR M+ +KK P SWIEI +K+H F A D HP D I
Sbjct: 679 HVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDI 738
Query: 603 NEALNILLEQMEKE 616
L+ + QM E
Sbjct: 739 YTVLHNIWSQMLDE 752
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 176/346 (50%), Gaps = 15/346 (4%)
Query: 183 KC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
KC + R+VFD MP R++VS+ +VI G +QNG EA+ + +M + L PD F S
Sbjct: 114 KCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGS 173
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
I+ A DV G ++H I+ + ++LI MY + N++ + R FY +P +D
Sbjct: 174 IIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKD 233
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKV-KPMQVSFSSVIPACAHLTALNLGKQLH 360
ISW+SIIAG Q G + + ++ML V P + F S + AC+ L + G Q+H
Sbjct: 234 LISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIH 293
Query: 361 GCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHAL 420
G I+ N SL DMYA+CG + AR +FD+IE D +W II G A +G+A
Sbjct: 294 GLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYAD 353
Query: 421 DAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEK-----DFRIAPG-L 474
+AVS+F +M G P ++ ++L A + + +G + + + K D + L
Sbjct: 354 EAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLL 413
Query: 475 EHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHK 520
Y +DL E DF +N W+T+L AC H+
Sbjct: 414 TMYTFCSDLYCCFNLFE---DFRNN----ADSVSWNTILTACLQHE 452
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 148/309 (47%), Gaps = 12/309 (3%)
Query: 213 QNGMFREALDMVREMGDDKLKPDSF-----TLSSILPIFAEHVDVVKGMEIHGYAIRHGF 267
++ +REAL E D K SF T S++ + + +G +IH + +
Sbjct: 43 KSNFYREAL----EAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNC 98
Query: 268 DGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQ 327
D + + ++ MY KC + + F +P R+ +S+ S+I G QNG+ + I + +
Sbjct: 99 KYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLK 158
Query: 328 MLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGN 387
ML+ + P Q +F S+I ACA + + LGKQLH +I+L + ++L+ MY +
Sbjct: 159 MLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQ 218
Query: 388 IKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGV-RPCYVAFMAVLT 446
+ A +F I +D+++W++II G + G +A+S ++ML GV P F + L
Sbjct: 219 MSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLK 278
Query: 447 ACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTG 506
ACS D G + K +A ++ D+ R G L A + +P
Sbjct: 279 ACSSLLRPDYGSQIHGLCIKS-ELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE-RPDT 336
Query: 507 SVWSTLLAA 515
+ W+ ++A
Sbjct: 337 ASWNVIIAG 345
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 32/181 (17%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
GL + + N L++MY K +LG R++FD M RD
Sbjct: 503 GLAPEQFIKNGLIDMYAKCGSLG------------------------QARRIFDSMDNRD 538
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVV-KGMEIH 259
VVSW+T+I G AQ+G EAL + +EM ++P+ T +L HV +V +G++++
Sbjct: 539 VVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTA-CSHVGLVEEGLKLY 597
Query: 260 G-YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLR---AFYLLPYRDAISWNSIIAGCVQN 315
HG S ++D+ A+ R+ + R L P D + W ++++ C
Sbjct: 598 ATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEP--DVVVWKTLLSACKTQ 655
Query: 316 G 316
G
Sbjct: 656 G 656
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 336 bits (862), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 197/611 (32%), Positives = 321/611 (52%), Gaps = 79/611 (12%)
Query: 147 YTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNT 206
Y +NAL Y + G +A K+FDE P + +D V W T
Sbjct: 44 YLSNALFQFY---ASSGEMVTAQKLFDEIP-------------------LSEKDNVDWTT 81
Query: 207 VIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHG 266
+++ ++ G+ ++ + EM +++ D ++ + + A+ D+ + HG A++ G
Sbjct: 82 LLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMG 141
Query: 267 FDGDVFIGSSLIDMYAKCNRV-------------------------------EHSLRAFY 295
V + ++L+DMY KC V E F+
Sbjct: 142 VLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFH 201
Query: 296 LLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQ--------VSFSSVIPAC 347
+P R+A++W ++AG + G GF R++L+ + + V+ S++ AC
Sbjct: 202 EMPERNAVAWTVMVAGYL-------GAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSAC 254
Query: 348 AHLTALNLGKQLHGCIIR----LGFD---DNKFIASSLVDMYAKCGNIKMARYIFDKIET 400
A L +G+ +H ++ +G + D+ + ++LVDMYAKCGNI + +F +
Sbjct: 255 AQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRK 314
Query: 401 RDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKY 460
R++V W A+ G AMHG + +F +M+ + V+P + F AVL+ACSH+G+VDEGW+
Sbjct: 315 RNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRC 373
Query: 461 FNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHK 520
F+S+ + + + P ++HYA + DLLGRAG +EEA + M + P V +LL +C H
Sbjct: 374 FHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHG 432
Query: 521 SVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWI 580
VE+AE++ +++ + P N +LMSN+Y A R A LR +R +G++K P S I
Sbjct: 433 KVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSI 492
Query: 581 EIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVL--HDVDDEYKRDLL 638
+ + VH F +GD+SHP +I LN ++E++ GYV D S ++ + D E K L
Sbjct: 493 YVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQAL 552
Query: 639 RTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHF 698
HSE+LA+ F V KN+R+C DCH+A+K +SK+ REI++RD +RFH F
Sbjct: 553 CCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQF 612
Query: 699 MNGSCSCGDYW 709
GSCSC DYW
Sbjct: 613 KGGSCSCSDYW 623
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 79/160 (49%), Gaps = 4/160 (2%)
Query: 255 GMEIHGYAIRHGFDG--DVFIGSSLIDMYAKCNRVEHSLRAFYLLPY--RDAISWNSIIA 310
G E+H G ++ ++L YA + + + F +P +D + W ++++
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLS 84
Query: 311 GCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDD 370
+ G + F +M + +V+ VS + CA L L +Q HG +++G
Sbjct: 85 SFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLT 144
Query: 371 NKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAII 410
+ + ++L+DMY KCG + + IF+++E + +V+WT ++
Sbjct: 145 SVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVL 184
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 112/261 (42%), Gaps = 16/261 (6%)
Query: 347 CAHLTALNLGKQLHGCIIRLGFDD--NKFIASSLVDMYAKCGNIKMARYIFDKI--ETRD 402
CAH + L GK+LH + G +++++L YA G + A+ +FD+I +D
Sbjct: 16 CAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKD 75
Query: 403 MVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGW-KYF 461
V WT ++ + +G ++++ LF +M V V+ + + C A L D G+ +
Sbjct: 76 NVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVC--AKLEDLGFAQQG 133
Query: 462 NSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKS 521
+ + + ++ A+ D+ G+ G + E + + S W+ +L +
Sbjct: 134 HGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVS-WTVVLDTVVKWEG 192
Query: 522 VELAEKVVDKILLVDPE-NMGAYVLMSNIYSAAKRWKDAAKLRIHMRSK---GLKKTPAC 577
+E +V ++ PE N A+ +M Y A ++ +L M + GL C
Sbjct: 193 LERGREVFHEM----PERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLC 248
Query: 578 SWIEIGNKVHTFLAGDKSHPY 598
S + + + G H Y
Sbjct: 249 SMLSACAQSGNLVVGRWVHVY 269
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 335 bits (860), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 188/579 (32%), Positives = 297/579 (51%), Gaps = 60/579 (10%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
+R G ++ FPS+L A G ++Y +AL++MY K
Sbjct: 218 LRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAK--- 274
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
C+ E++S R + + M DVVSWN++I G + G+ EAL
Sbjct: 275 --------------------CR-EMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEAL 313
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFA-EHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDM 280
M M + +K D FT+ SIL FA ++ H ++ G+ + ++L+DM
Sbjct: 314 SMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDM 373
Query: 281 YAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSF 340
YAK ++ +L+ F + +D ISW +++ G NG +D+ + F M + P ++
Sbjct: 374 YAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVT 433
Query: 341 SSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIET 400
+SV+ A A LT L G+Q+HG I+ GF + + +SLV MY KCG+++ A IF+ +E
Sbjct: 434 ASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEI 493
Query: 401 RDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKY 460
RD++ WT +I+G A +G +LED R Y
Sbjct: 494 RDLITWTCLIVGYAKNG-----------LLEDAQR------------------------Y 518
Query: 461 FNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHK 520
F+SM + I PG EHYA + DL GR+G + + M ++P +VW +LAA R H
Sbjct: 519 FDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHG 578
Query: 521 SVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWI 580
++E E+ ++ ++P N YV +SN+YSAA R +AA +R M+S+ + K P CSW+
Sbjct: 579 NIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWV 638
Query: 581 EIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRT 640
E KVH+F++ D+ HP +I ++ ++ +++ GY D S LHD+D E K L
Sbjct: 639 EEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKELGLAY 698
Query: 641 HSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFI 679
HSE+LA+AF R+IKN+RVC DCH+A+K +
Sbjct: 699 HSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAMKLL 737
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 209/411 (50%), Gaps = 45/411 (10%)
Query: 163 GGFGSANKVFDENPQRGK----------GCKCEIDSVRKVFDLMPARDVVSWNTVIAGNA 212
G A ++FD+ P+R + + K+F P ++ +SWN +I+G
Sbjct: 42 GRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYC 101
Query: 213 QNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVF 272
++G EA ++ EM D +KP+ +TL S+L + V +++G +IHG+ I+ GFD DV
Sbjct: 102 KSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVN 161
Query: 273 IGSSLIDMYAKCNRVEHSLRAFYLLP-YRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKA 331
+ + L+ MYA+C R+ + F + ++ ++W S++ G QNG + I FR + +
Sbjct: 162 VVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRRE 221
Query: 332 KVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMA 391
+ Q +F SV+ ACA ++A +G Q+H CI++ GF N ++ S+L+DMYAKC ++ A
Sbjct: 222 GNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESA 281
Query: 392 RYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM------LEDGVRPCYVAFMAV- 444
R + + +E D+V+W ++I+GC G +A+S+F +M ++D P + A+
Sbjct: 282 RALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALS 341
Query: 445 -----LTACSHAGLVDEG---WKYFNS-----------MEKDFRIAPGLEH-----YAAV 480
+ + +H +V G +K N+ M+ ++ G+ + A+
Sbjct: 342 RTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTAL 401
Query: 481 ADLLGRAGRLEEAYDFISNM---GIQPTGSVWSTLLAACRAHKSVELAEKV 528
G +EA NM GI P V +++L+A +E ++V
Sbjct: 402 VTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQV 452
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 335 bits (858), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 185/530 (34%), Positives = 291/530 (54%), Gaps = 17/530 (3%)
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKL------KPDSFTLSSILP 244
++F +P WN +I G A + A R M + D+ T S L
Sbjct: 58 QIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLK 117
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS 304
A + ++H R G D + ++L+D Y+K + + + F +P RD S
Sbjct: 118 ACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVAS 177
Query: 305 WNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQL-HGCI 363
WN++IAG V + + + +++M ++ +V+ + + AC+HL + G+ + HG
Sbjct: 178 WNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS 237
Query: 364 IRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIE-TRDMVAWTAIIMGCAMHGHALDA 422
+DN ++++ +DMY+KCG + A +F++ + +V W +I G A+HG A A
Sbjct: 238 -----NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRA 292
Query: 423 VSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVAD 482
+ +F+K+ ++G++P V+++A LTAC HAGLV+ G FN+M + ++HY V D
Sbjct: 293 LEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVD 351
Query: 483 LLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGA 542
LL RAGRL EA+D I +M + P +W +LL A + VE+AE +I + N G
Sbjct: 352 LLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGD 411
Query: 543 YVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKI 602
+VL+SN+Y+A RWKD ++R M SK +KK P S+IE +H F DKSH + +I
Sbjct: 412 FVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREI 471
Query: 603 NEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXX---XXXXXX 659
E ++ + ++ ++GYV T VLHD+ +E K + L HSE+LA+A+
Sbjct: 472 YEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESP 531
Query: 660 XRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
RVI N+R+C DCH K ISKI REI+VRD RFH F +GSCSC D+W
Sbjct: 532 VRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 129/268 (48%), Gaps = 16/268 (5%)
Query: 149 ANALMNMYCKVQNLGGFGSA---NKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWN 205
++A+ ++C++ G + + D + G ++ S K+FD MP RDV SWN
Sbjct: 125 SSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNG-----DLISAYKLFDEMPVRDVASWN 179
Query: 206 TVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEI-HGYAIR 264
+IAG EA+++ + M + ++ T+ + L + DV +G I HGY+
Sbjct: 180 ALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS-- 237
Query: 265 HGFDGDVFIGSSLIDMYAKCNRVEHSLRAF-YLLPYRDAISWNSIIAGCVQNGKFDQGIG 323
+ +V + ++ IDMY+KC V+ + + F + ++WN++I G +G+ + +
Sbjct: 238 ---NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALE 294
Query: 324 FFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYA 383
F ++ +KP VS+ + + AC H + G + + G + N +VD+ +
Sbjct: 295 IFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLS 354
Query: 384 KCGNIKMARYIFDKIE-TRDMVAWTAII 410
+ G ++ A I + D V W +++
Sbjct: 355 RAGRLREAHDIICSMSMIPDPVLWQSLL 382
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 183/514 (35%), Positives = 284/514 (55%), Gaps = 27/514 (5%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
MR G+ P+RH FP LLKA GLD D + N+L++ Y
Sbjct: 95 MRRNGVIPSRHTFPPLLKA-VFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGY----- 148
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
S++ +FD ++FD +DVV+W +I G +NG EA+
Sbjct: 149 -----SSSGLFD--------------FASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAM 189
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHG-FDGDVFIGSSLIDM 280
EM + + T+ S+L + DV G +HG + G DVFIGSSL+DM
Sbjct: 190 VYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDM 249
Query: 281 YAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSF 340
Y KC+ + + + F +P R+ ++W ++IAG VQ+ FD+G+ F +MLK+ V P + +
Sbjct: 250 YGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTL 309
Query: 341 SSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIET 400
SSV+ ACAH+ AL+ G+++H +I+ + N ++L+D+Y KCG ++ A +F+++
Sbjct: 310 SSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHE 369
Query: 401 RDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKY 460
+++ WTA+I G A HG+A DA LF ML V P V FMAVL+AC+H GLV+EG +
Sbjct: 370 KNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRL 429
Query: 461 FNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHK 520
F SM+ F + P +HYA + DL GR G LEEA I M ++PT VW L +C HK
Sbjct: 430 FLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHK 489
Query: 521 SVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWI 580
EL + +++ + P + G Y L++N+YS ++ W + A++R M+ + + K+P SWI
Sbjct: 490 DYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWI 549
Query: 581 EIGNKVHTFLAGDKSHPY-YDKINEALNILLEQM 613
E+ K+ F+A D P D + + L+ + QM
Sbjct: 550 EVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQM 583
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 329 bits (844), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 173/435 (39%), Positives = 264/435 (60%), Gaps = 10/435 (2%)
Query: 192 VFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVD 251
VF M RDVVSWNT+I+ QNG+ E L +V EM K D T++++L + +
Sbjct: 375 VFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRN 434
Query: 252 VVKGMEIHGYAIRHG--FDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPY--RDAISWNS 307
G + H + IR G F+G + S LIDMY+K + S + F Y RD +WNS
Sbjct: 435 KEIGKQTHAFLIRQGIQFEG---MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNS 491
Query: 308 IIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLG 367
+I+G QNG ++ FR+ML+ ++P V+ +S++PAC+ + +++LGKQLHG IR
Sbjct: 492 MISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY 551
Query: 368 FDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFE 427
D N F+AS+LVDMY+K G IK A +F + + R+ V +T +I+G HG A+SLF
Sbjct: 552 LDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFL 611
Query: 428 KMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRA 487
M E G++P + F+AVL+ACS++GL+DEG K F M + + I P EHY + D+LGR
Sbjct: 612 SMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRV 671
Query: 488 GRLEEAYDFISNMGIQPT-GSVWSTLLAACRAHKSVELAEKVVDKILLVDP-ENMGAY-V 544
GR+ EAY+F+ +G + +W +LL +C+ H +ELAE V +++ D +N Y V
Sbjct: 672 GRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEV 731
Query: 545 LMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINE 604
L+SN+Y+ ++WK K+R MR KGLKK S IEI V+ F++ D+ HP+ +I +
Sbjct: 732 LLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYD 791
Query: 605 ALNILLEQMEKEGYV 619
++ L + M + ++
Sbjct: 792 VIDGLAKDMRGDSFL 806
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 165/323 (51%), Gaps = 15/323 (4%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVRE-MGDDKLKPDSFTLSSIL 243
+I+S R+VFD R++ WNT+I QN E++++ E +G ++ D T
Sbjct: 266 DIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAA 325
Query: 244 PIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAI 303
+ V G + HG+ ++ + + I +SL+ MY++C V S F + RD +
Sbjct: 326 SAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVV 385
Query: 304 SWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCI 363
SWN++I+ VQNG D+G+ +M K K ++ ++++ A ++L +GKQ H +
Sbjct: 386 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFL 445
Query: 364 IRLGFDDNKFIASSLVDMYAKCGNIKMARYIFD--KIETRDMVAWTAIIMGCAMHGHALD 421
IR G + S L+DMY+K G I++++ +F+ RD W ++I G +GH
Sbjct: 446 IRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEK 504
Query: 422 AVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVD-----EGWKYFNSMEKDFRIAPGLEH 476
+F KMLE +RP V ++L ACS G VD G+ ++++ +A
Sbjct: 505 TFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVA----- 559
Query: 477 YAAVADLLGRAGRLEEAYDFISN 499
+A+ D+ +AG ++ A D S
Sbjct: 560 -SALVDMYSKAGAIKYAEDMFSQ 581
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 186/416 (44%), Gaps = 55/416 (13%)
Query: 150 NALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIA 209
N+LMNMY N A F E D VRKVFD M ++VV+WNT+I+
Sbjct: 146 NSLMNMYVSCLN------APDCF------------EYDVVRKVFDNMRRKNVVAWNTLIS 187
Query: 210 GNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHG--F 267
+ G EA M ++KP + ++ P + + K +G ++ G +
Sbjct: 188 WYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEY 247
Query: 268 DGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQ 327
D+F+ SS I MYA+ +E S R F R+ WN++I VQN + I F +
Sbjct: 248 VKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLE 307
Query: 328 MLKAK-VKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCG 386
+ +K + +V++ A + L + LG+Q HG + + + I +SL+ MY++CG
Sbjct: 308 AIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCG 367
Query: 387 NIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLT 446
++ + +F + RD+V+W +I +G + + L +M + G + Y+ A+L+
Sbjct: 368 SVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLS 427
Query: 447 ACS-----------HAGLVDEGWKY--FNSMEKD-------FRIAPGLEHYAAVADL--- 483
A S HA L+ +G ++ NS D RI+ L + A+
Sbjct: 428 AASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQA 487
Query: 484 --------LGRAGRLEEAYDFISNM---GIQPTGSVWSTLLAACRAHKSVELAEKV 528
+ G E+ + M I+P +++L AC SV+L +++
Sbjct: 488 TWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQL 543
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 174/356 (48%), Gaps = 27/356 (7%)
Query: 173 DENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKL 232
D NPQ R++FD +P V WNT+I G N + EAL M K
Sbjct: 52 DGNPQLA----------RQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRM--KKT 99
Query: 233 KP----DSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKC---- 284
P D++T SS L AE ++ G +H + IR + + +SL++MY C
Sbjct: 100 APFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAP 159
Query: 285 NRVEHSL--RAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSS 342
+ E+ + + F + ++ ++WN++I+ V+ G+ + F M++ +VKP VSF +
Sbjct: 160 DCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVN 219
Query: 343 VIPACAHLTALNLGKQLHGCIIRLG--FDDNKFIASSLVDMYAKCGNIKMARYIFDKIET 400
V PA + ++ +G +++LG + + F+ SS + MYA+ G+I+ +R +FD
Sbjct: 220 VFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVE 279
Query: 401 RDMVAWTAIIMGCAMHGHALDAVSLF-EKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWK 459
R++ W +I + ++++ LF E + + V ++ +A S V+ G +
Sbjct: 280 RNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQ 339
Query: 460 YFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAA 515
+ + K+FR P + ++ + R G + +++ +M + S W+T+++A
Sbjct: 340 FHGFVSKNFRELP-IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVS-WNTMISA 393
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 127/284 (44%), Gaps = 34/284 (11%)
Query: 294 FYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQ----VSFSSVIPACAH 349
F +P + WN+II G + N + + F+ +M K P ++SS + ACA
Sbjct: 62 FDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRM--KKTAPFTNCDAYTYSSTLKACAE 119
Query: 350 LTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIK------MARYIFDKIETRDM 403
L GK +H +IR + ++ + +SL++MY C N + R +FD + +++
Sbjct: 120 TKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNV 179
Query: 404 VAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNS 463
VAW +I G +A F M+ V+P V+F+ V A S + + + ++
Sbjct: 180 VAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGL 239
Query: 464 MEK--------DFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAA 515
M K F ++ + YA + D+ E+ + + ++ VW+T++
Sbjct: 240 MLKLGDEYVKDLFVVSSAISMYAELGDI--------ESSRRVFDSCVERNIEVWNTMIGV 291
Query: 516 CRAH----KSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKR 555
+ +S+EL + + +V E Y+L ++ SA ++
Sbjct: 292 YVQNDCLVESIELFLEAIGSKEIVSDEV--TYLLAASAVSALQQ 333
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 328 bits (840), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 176/517 (34%), Positives = 284/517 (54%), Gaps = 28/517 (5%)
Query: 100 NAMRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKV 159
+M G+ P + S+L + L D Y N+L++MY K
Sbjct: 339 TSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAK- 397
Query: 160 QNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGM--- 216
C C D+ RKVFD+ A DVV +N +I G ++ G
Sbjct: 398 ----------------------CDCLTDA-RKVFDIFAAADVVLFNAMIEGYSRLGTQWE 434
Query: 217 FREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSS 276
EAL++ R+M ++P T S+L A + +IHG ++G + D+F GS+
Sbjct: 435 LHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSA 494
Query: 277 LIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPM 336
LID+Y+ C ++ S F + +D + WNS+ AG VQ + ++ + F ++ ++ +P
Sbjct: 495 LIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPD 554
Query: 337 QVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFD 396
+ +F++++ A +L ++ LG++ H +++ G + N +I ++L+DMYAKCG+ + A FD
Sbjct: 555 EFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFD 614
Query: 397 KIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDE 456
+RD+V W ++I A HG A+ + EKM+ +G+ P Y+ F+ VL+ACSHAGLV++
Sbjct: 615 SAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVED 674
Query: 457 GWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAAC 516
G K F M + F I P EHY + LLGRAGRL +A + I M +P VW +LL+ C
Sbjct: 675 GLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGC 733
Query: 517 RAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPA 576
+VELAE + +L DP++ G++ ++SNIY++ W +A K+R M+ +G+ K P
Sbjct: 734 AKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPG 793
Query: 577 CSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQM 613
SWI I +VH FL+ DKSH ++I E L+ LL Q+
Sbjct: 794 RSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQI 830
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 167/316 (52%), Gaps = 35/316 (11%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
GL+ D Y +N L+N+Y + GG A RKVF+ MP R+
Sbjct: 74 GLELDTYLSNILINLYSRA---GGMVYA---------------------RKVFEKMPERN 109
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDD-KLKPDSFTLSSILPIFAEHVDVVKG---- 255
+VSW+T+++ +G++ E+L + E K P+ + LSS F + + G
Sbjct: 110 LVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSS----FIQACSGLDGRGRW 165
Query: 256 --MEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCV 313
++ + ++ GFD DV++G+ LID Y K ++++ F LP + ++W ++I+GCV
Sbjct: 166 MVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCV 225
Query: 314 QNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKF 373
+ G+ + F Q+++ V P S+V+ AC+ L L GKQ+H I+R G + +
Sbjct: 226 KMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDAS 285
Query: 374 IASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDG 433
+ + L+D Y KCG + A +F+ + +++++WT ++ G + +A+ LF M + G
Sbjct: 286 LMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFG 345
Query: 434 VRPCYVAFMAVLTACS 449
++P A ++LT+C+
Sbjct: 346 LKPDMYACSSILTSCA 361
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 159/312 (50%), Gaps = 27/312 (8%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G D D+Y L++ Y K N ID R VFD +P +
Sbjct: 178 GFDRDVYVGTLLIDFYLKDGN------------------------IDYARLVFDALPEKS 213
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
V+W T+I+G + G +L + ++ +D + PD + LS++L + + G +IH
Sbjct: 214 TVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHA 273
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQ 320
+ +R+G + D + + LID Y KC RV + + F +P ++ ISW ++++G QN +
Sbjct: 274 HILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKE 333
Query: 321 GIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVD 380
+ F M K +KP + SS++ +CA L AL G Q+H I+ ++ ++ +SL+D
Sbjct: 334 AMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLID 393
Query: 381 MYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHAL---DAVSLFEKMLEDGVRPC 437
MYAKC + AR +FD D+V + A+I G + G +A+++F M +RP
Sbjct: 394 MYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPS 453
Query: 438 YVAFMAVLTACS 449
+ F+++L A +
Sbjct: 454 LLTFVSLLRASA 465
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 142/271 (52%), Gaps = 17/271 (6%)
Query: 258 IHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGK 317
+HG I G + D ++ + LI++Y++ + ++ + F +P R+ +SW+++++ C +G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 318 FDQGIGFFRQMLKA-KVKPMQVSFSSVIPACAHLTALN--LGKQLHGCIIRLGFDDNKFI 374
+++ + F + + K P + SS I AC+ L + QL +++ GFD + ++
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 375 ASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGV 434
+ L+D Y K GNI AR +FD + + V WT +I GC G + ++ LF +++ED V
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 435 RPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLL----GRAGRL 490
P VL+ACS ++ G + + + GLE A++ ++L + GR+
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHI-----LRYGLEMDASLMNVLIDSYVKCGRV 300
Query: 491 EEAYDFISNMGIQPTGSV--WSTLLAACRAH 519
A+ + M P ++ W+TLL+ + +
Sbjct: 301 IAAHKLFNGM---PNKNIISWTTLLSGYKQN 328
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 95/188 (50%), Gaps = 15/188 (7%)
Query: 359 LHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGH 418
+HG II G + + ++++ L+++Y++ G + AR +F+K+ R++V+W+ ++ C HG
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 419 ALDAVSLF-EKMLEDGVRPCYVAFMAVLTACSHAGLVDEG-WKYFNSMEKDFRIAPGLEH 476
+++ +F E P + + ACS GL G W F + F + G +
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQL--QSFLVKSGFDR 181
Query: 477 YAAVADLL----GRAGRLEEAYDFISNMGIQPTGSVWSTLLAAC----RAHKSVELAEKV 528
V LL + G ++ A + + + + W+T+++ C R++ S++L ++
Sbjct: 182 DVYVGTLLIDFYLKDGNIDYA-RLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQL 240
Query: 529 VDKILLVD 536
++ ++ D
Sbjct: 241 MEDNVVPD 248
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/437 (39%), Positives = 259/437 (59%), Gaps = 3/437 (0%)
Query: 182 CKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREM--GDDKLKPDSFTL 239
C C+ D+ VF M +D+V+W ++I+G +NG F+EAL + +M DD LKPDS +
Sbjct: 421 CGCDPDAYL-VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIM 479
Query: 240 SSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPY 299
+S+ A + G+++HG I+ G +VF+GSSLID+Y+KC E +L+ F +
Sbjct: 480 TSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMST 539
Query: 300 RDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQL 359
+ ++WNS+I+ +N + I F ML + P VS +SV+ A + +L GK L
Sbjct: 540 ENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSL 599
Query: 360 HGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHA 419
HG +RLG + + ++L+DMY KCG K A IF K++ + ++ W +I G HG
Sbjct: 600 HGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDC 659
Query: 420 LDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAA 479
+ A+SLF++M + G P V F+++++AC+H+G V+EG F M++D+ I P +EHYA
Sbjct: 660 ITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYAN 719
Query: 480 VADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPEN 539
+ DLLGRAG LEEAY FI M I+ S+W LL+A R H +VEL +K+L ++PE
Sbjct: 720 MVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPER 779
Query: 540 MGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYY 599
YV + N+Y A +AAKL M+ KGL K P CSWIE+ ++ + F +G S P
Sbjct: 780 GSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMK 839
Query: 600 DKINEALNILLEQMEKE 616
+I LN L M E
Sbjct: 840 AEIFNVLNRLKSNMVDE 856
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 164/347 (47%), Gaps = 20/347 (5%)
Query: 114 FPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGFGSANKVFD 173
FPSLLKA + G +D + A +L+NMY K G A +VFD
Sbjct: 63 FPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKC---GFLDYAVQVFD 119
Query: 174 ENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLK 233
Q G + ARDV WN++I G + F+E + R M ++
Sbjct: 120 GWSQSQSG--------------VSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVR 165
Query: 234 PDSFTLSSILPIFAEHVDVVK--GMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSL 291
PD+F+LS ++ + + + + G +IHG+ +R+ D D F+ ++LIDMY K +
Sbjct: 166 PDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAW 225
Query: 292 RAFYLLPYR-DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHL 350
R F + + + + WN +I G +G + + + VK + SF+ + AC+
Sbjct: 226 RVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQS 285
Query: 351 TALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAII 410
G+Q+H ++++G ++ ++ +SL+ MY+KCG + A +F + + + W A++
Sbjct: 286 ENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMV 345
Query: 411 MGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG 457
A + + A+ LF M + V P V++ CS GL + G
Sbjct: 346 AAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYG 392
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 188/420 (44%), Gaps = 29/420 (6%)
Query: 142 LDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDV 201
LD D + AL++MY K FG ID+ R ++ +V
Sbjct: 201 LDTDSFLKTALIDMYFK------FG-----------------LSIDAWRVFVEIEDKSNV 237
Query: 202 VSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGY 261
V WN +I G +G+ +LD+ ++ +K S + + L ++ + G +IH
Sbjct: 238 VLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCD 297
Query: 262 AIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQG 321
++ G D ++ +SL+ MY+KC V + F + + WN+++A +N
Sbjct: 298 VVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSA 357
Query: 322 IGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDM 381
+ F M + V P + S+VI C+ L N GK +H + + I S+L+ +
Sbjct: 358 LDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTL 417
Query: 382 YAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKML--EDGVRPCYV 439
Y+KCG A +F +E +DMVAW ++I G +G +A+ +F M +D ++P
Sbjct: 418 YSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSD 477
Query: 440 AFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISN 499
+V AC+ + G + SM K + + +++ DL + G E A ++
Sbjct: 478 IMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLYSKCGLPEMALKVFTS 536
Query: 500 MGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILL--VDPENMGAYVLMSNIYSAAKRWK 557
M + W+++++ + EL+ + + +L + P+++ ++ I S A K
Sbjct: 537 MSTENM-VAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLK 595
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 127/260 (48%), Gaps = 11/260 (4%)
Query: 203 SWNTVIAGNAQNGMFREALDMV-REMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGY 261
S N+ I Q G + +AL + + G FT S+L + ++ G IHG
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 262 AIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAF-------YLLPYRDAISWNSIIAGCVQ 314
+ G+ D FI +SL++MY KC ++++++ F + RD WNS+I G +
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 315 NGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTAL--NLGKQLHGCIIRLGFDDNK 372
+F +G+G FR+ML V+P S S V+ GKQ+HG ++R D +
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDS 205
Query: 373 FIASSLVDMYAKCGNIKMARYIFDKIETR-DMVAWTAIIMGCAMHGHALDAVSLFEKMLE 431
F+ ++L+DMY K G A +F +IE + ++V W +I+G G ++ L+
Sbjct: 206 FLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKN 265
Query: 432 DGVRPCYVAFMAVLTACSHA 451
+ V+ +F L ACS +
Sbjct: 266 NSVKLVSTSFTGALGACSQS 285
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 76/146 (52%), Gaps = 8/146 (5%)
Query: 299 YRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQV-SFSSVIPACAHLTALNLGK 357
Y S NS I +Q G++ Q + + + + V +F S++ AC+ LT L+ GK
Sbjct: 21 YISPASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGK 80
Query: 358 QLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFD-------KIETRDMVAWTAII 410
+HG ++ LG+ + FIA+SLV+MY KCG + A +FD + RD+ W ++I
Sbjct: 81 TIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMI 140
Query: 411 MGCAMHGHALDAVSLFEKMLEDGVRP 436
G + V F +ML GVRP
Sbjct: 141 DGYFKFRRFKEGVGCFRRMLVFGVRP 166
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 325 bits (833), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 177/524 (33%), Positives = 282/524 (53%), Gaps = 32/524 (6%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
MRA GI P ++ FPSLLK S G D D Y + L+ Y K +
Sbjct: 152 MRANGILPDKYTFPSLLKGSDAMELSDVKKVHGLAFKL-GFDSDCYVGSGLVTSYSKFMS 210
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
+ A KVFDE P R D V WN ++ G +Q F +AL
Sbjct: 211 VE---DAQKVFDELPDRD--------------------DSVLWNALVNGYSQIFRFEDAL 247
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMY 281
+ +M ++ + T++S+L F D+ G IHG A++ G D+ + ++LIDMY
Sbjct: 248 LVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMY 307
Query: 282 AKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQN--GKFDQGIGFFRQMLKAKVKPMQVS 339
K +E + F + RD +WNS++ CV + G D + F +ML + ++P V+
Sbjct: 308 GKSKWLEEANSIFEAMDERDLFTWNSVL--CVHDYCGDHDGTLALFERMLCSGIRPDIVT 365
Query: 340 FSSVIPACAHLTALNLGKQLHGCIIRLGF----DDNKFIASSLVDMYAKCGNIKMARYIF 395
++V+P C L +L G+++HG +I G N+FI +SL+DMY KCG+++ AR +F
Sbjct: 366 LTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVF 425
Query: 396 DKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVD 455
D + +D +W +I G + A+ +F M GV+P + F+ +L ACSH+G ++
Sbjct: 426 DSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLN 485
Query: 456 EGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAA 515
EG + ME + I P +HYA V D+LGRA +LEEAY+ + I VW ++L++
Sbjct: 486 EGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSS 545
Query: 516 CRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTP 575
CR H + +LA ++ ++PE+ G YVLMSN+Y A ++++ +R MR + +KKTP
Sbjct: 546 CRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTP 605
Query: 576 ACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYV 619
CSWI + N VHTF G+++HP + I++ L++++ M Y+
Sbjct: 606 GCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHMHGHEYM 649
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 185/384 (48%), Gaps = 21/384 (5%)
Query: 156 YCKVQNLGGFGSANKVFDENPQRGKG-----CKCEIDSVRKVFDLMPARDVVSWNTVIAG 210
Y Q + GF D++P+ G KC + + RDV +N +I+G
Sbjct: 76 YVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSERDVFGYNALISG 135
Query: 211 NAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGD 270
NG +A++ REM + + PD +T S+L ++ +++ ++HG A + GFD D
Sbjct: 136 FVVNGSPLDAMETYREMRANGILPDKYTFPSLLK-GSDAMELSDVKKVHGLAFKLGFDSD 194
Query: 271 VFIGSSLIDMYAKCNRVEHSLRAFYLLPYR-DAISWNSIIAGCVQNGKFDQGIGFFRQML 329
++GS L+ Y+K VE + + F LP R D++ WN+++ G Q +F+ + F +M
Sbjct: 195 CYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMR 254
Query: 330 KAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIK 389
+ V + + +SV+ A ++ G+ +HG ++ G + ++++L+DMY K ++
Sbjct: 255 EEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLE 314
Query: 390 MARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACS 449
A IF+ ++ RD+ W +++ G ++LFE+ML G+RP V VL C
Sbjct: 315 EANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCG 374
Query: 450 HAGLVDEGWKYFNSMEKDFRIAPGLEH--------YAAVADLLGRAGRLEEAYDFISNMG 501
+ +G + M I GL + + ++ D+ + G L +A +M
Sbjct: 375 RLASLRQGREIHGYM-----IVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMR 429
Query: 502 IQPTGSVWSTLLAACRAHKSVELA 525
++ + S W+ ++ ELA
Sbjct: 430 VKDSAS-WNIMINGYGVQSCGELA 452
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 134/256 (52%), Gaps = 5/256 (1%)
Query: 247 AEHVDVVKGMEIHGYAIRHGF-DGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISW 305
A+ D V G +IHG+ +R GF D G+SL++MYAKC + ++ F RD +
Sbjct: 71 AQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFG-GSERDVFGY 129
Query: 306 NSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIR 365
N++I+G V NG + +R+M + P + +F S++ + ++ K++HG +
Sbjct: 130 NALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV-KKVHGLAFK 188
Query: 366 LGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR-DMVAWTAIIMGCAMHGHALDAVS 424
LGFD + ++ S LV Y+K +++ A+ +FD++ R D V W A++ G + DA+
Sbjct: 189 LGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALL 248
Query: 425 LFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLL 484
+F KM E+GV +VL+A + +G +D G + + + + A+ D+
Sbjct: 249 VFSKMREEGVGVSRHTITSVLSAFTVSGDIDNG-RSIHGLAVKTGSGSDIVVSNALIDMY 307
Query: 485 GRAGRLEEAYDFISNM 500
G++ LEEA M
Sbjct: 308 GKSKWLEEANSIFEAM 323
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 342 SVIPACAHLTALNLGKQLHGCIIRLGF-DDNKFIASSLVDMYAKCGNIKMARYIFDKIET 400
+ + CA G+Q+HG ++R GF DD+ +SLV+MYAKCG ++ A +F E
Sbjct: 65 ATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSE- 123
Query: 401 RDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKY 460
RD+ + A+I G ++G LDA+ + +M +G+ P F ++L L D
Sbjct: 124 RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSD----- 178
Query: 461 FNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHK 520
+++ + +G V S L+ +
Sbjct: 179 -----------------------------VKKVHGLAFKLGFDSDCYVGSGLVTSYSKFM 209
Query: 521 SVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGL 571
SVE A+KV D+ L D ++ + + N YS R++DA + MR +G+
Sbjct: 210 SVEDAQKVFDE--LPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGV 258
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 323 bits (827), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 173/476 (36%), Positives = 273/476 (57%), Gaps = 25/476 (5%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G D +L N L++MY K G A F M +D
Sbjct: 416 GWDSNLQVGNTLIDMYSKCNLTCYMGRA------------------------FLRMHDKD 451
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
++SW TVIAG AQN EAL++ R++ +++ D L SIL + ++ EIH
Sbjct: 452 LISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 511
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQ 320
+ +R G D I + L+D+Y KC + ++ R F + +D +SW S+I+ NG +
Sbjct: 512 HILRKGLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 570
Query: 321 GIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVD 380
+ FR+M++ + V+ ++ A A L+ALN G+++H ++R GF IA ++VD
Sbjct: 571 AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVD 630
Query: 381 MYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVA 440
MYA CG+++ A+ +FD+IE + ++ +T++I MHG AV LF+KM + V P +++
Sbjct: 631 MYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHIS 690
Query: 441 FMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM 500
F+A+L ACSHAGL+DEG + ME ++ + P EHY + D+LGRA + EA++F+ M
Sbjct: 691 FLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMM 750
Query: 501 GIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAA 560
+PT VW LLAACR+H E+ E ++L ++P+N G VL+SN+++ RW D
Sbjct: 751 KTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVE 810
Query: 561 KLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKE 616
K+R M++ G++K P CSWIE+ KVH F A DKSHP +I E L+ + ++E+E
Sbjct: 811 KVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLERE 866
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 209/389 (53%), Gaps = 33/389 (8%)
Query: 145 DLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSW 204
+LY NAL+ MY + + PQ ++ M DVV+W
Sbjct: 319 ELYVCNALIAMYTRCGKM-------------PQ-----------AERILRQMNNADVVTW 354
Query: 205 NTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIR 264
N++I G QN M++EAL+ +M K D +++SI+ +++ GME+H Y I+
Sbjct: 355 NSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIK 414
Query: 265 HGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGF 324
HG+D ++ +G++LIDMY+KCN + RAF + +D ISW ++IAG QN + +
Sbjct: 415 HGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALEL 474
Query: 325 FRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAK 384
FR + K +++ ++ S++ A + L ++ + K++H I+R G D I + LVD+Y K
Sbjct: 475 FRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDT-VIQNELVDVYGK 533
Query: 385 CGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAV 444
C N+ A +F+ I+ +D+V+WT++I A++G+ +AV LF +M+E G+ VA + +
Sbjct: 534 CRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCI 593
Query: 445 LTACSHAGLVDEGWK-YFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEA---YDFISNM 500
L+A + +++G + + + K F + + AV D+ G L+ A +D I
Sbjct: 594 LSAAASLSALNKGREIHCYLLRKGFCLEGSIA--VAVVDMYACCGDLQSAKAVFDRIERK 651
Query: 501 G-IQPTGSVWSTLLAACRAHKSVELAEKV 528
G +Q T + + + C +VEL +K+
Sbjct: 652 GLLQYTSMINAYGMHGC-GKAAVELFDKM 679
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 187/413 (45%), Gaps = 40/413 (9%)
Query: 183 KC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
KC +D KVFD MP R +WNT+I NG AL + M + + + +
Sbjct: 128 KCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPA 187
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR- 300
+L A+ D+ G E+H ++ G+ FI ++L+ MYAK + + + R F +
Sbjct: 188 LLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKG 247
Query: 301 DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLH 360
DA+ WNSI++ +GK + + FR+M P + S + AC + LGK++H
Sbjct: 248 DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH 307
Query: 361 GCIIRLGFDDNK-FIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHA 419
+++ ++ ++ ++L+ MY +CG + A I ++ D+V W ++I G +
Sbjct: 308 ASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMY 367
Query: 420 LDAVSLFEKMLEDGVRPCYVAFMAVLTACS-----------HAGLVDEGWKYFNSMEKDF 468
+A+ F M+ G + V+ +++ A HA ++ GW + +
Sbjct: 368 KEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGW------DSNL 421
Query: 469 RIAPGLEHYAAVADL---LGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAH----KS 521
++ L + +L +GRA D IS W+T++A + ++
Sbjct: 422 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLIS----------WTTVIAGYAQNDCHVEA 471
Query: 522 VELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKT 574
+EL V K + +D +G+ + S++ + K+ + H+ KGL T
Sbjct: 472 LELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKE---IHCHILRKGLLDT 521
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 131/275 (47%), Gaps = 5/275 (1%)
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRH--GFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPY 299
+L + + V +G ++H + F+ D F+ L+ MY KC ++ + + F +P
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPD 144
Query: 300 RDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQL 359
R A +WN++I V NG+ + + M V SF +++ ACA L + G +L
Sbjct: 145 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSEL 204
Query: 360 HGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR-DMVAWTAIIMGCAMHGH 418
H +++LG+ FI ++LV MYAK ++ AR +FD + + D V W +I+ + G
Sbjct: 205 HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGK 264
Query: 419 ALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYA 478
+L+ + LF +M G P ++ LTAC G + S+ K + L
Sbjct: 265 SLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCN 324
Query: 479 AVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLL 513
A+ + R G++ +A + M W++L+
Sbjct: 325 ALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 339 SFSSVIPACAHLTALNLGKQLHGCIIRL--GFDDNKFIASSLVDMYAKCGNIKMARYIFD 396
+F+ V+ C A++ G+QLH I + F+ + F+A LV MY KCG++ A +FD
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 397 KIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACS 449
++ R AW +I +G A++L+ M +GV +F A+L AC+
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACA 193
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 171/525 (32%), Positives = 286/525 (54%), Gaps = 26/525 (4%)
Query: 106 GISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGF 165
G SP S+LK+ G++ LY NA+MNMY
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYAT------- 158
Query: 166 GSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVR 225
C +++ +F + ++ V+W T+I G G L M +
Sbjct: 159 ----------------CSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYK 202
Query: 226 EMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCN 285
+M + + + ++ + A V G +IH I+ GF ++ + +S++D+Y +C
Sbjct: 203 QMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCG 262
Query: 286 RVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIP 345
+ + F+ + +D I+WN++I+ ++ + + F++ P +F+S++
Sbjct: 263 YLSEAKHYFHEMEDKDLITWNTLISE-LERSDSSEALLMFQRFESQGFVPNCYTFTSLVA 321
Query: 346 ACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKI-ETRDMV 404
ACA++ ALN G+QLHG I R GF+ N +A++L+DMYAKCGNI ++ +F +I + R++V
Sbjct: 322 ACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLV 381
Query: 405 AWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSM 464
+WT++++G HG+ +AV LF+KM+ G+RP + FMAVL+AC HAGLV++G KYFN M
Sbjct: 382 SWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVM 441
Query: 465 EKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVEL 524
E ++ I P + Y V DLLGRAG++ EAY+ + M +P S W +L AC+AHK L
Sbjct: 442 ESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGL 501
Query: 525 AEKV-VDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIG 583
++ K++ + P+ +G YV++S IY+A +W D A++R MR G KK SWI +
Sbjct: 502 ISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVE 561
Query: 584 NKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHD 628
N+V +F DK P + L +L+E+ + GYV + +++D
Sbjct: 562 NQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPELDSLVND 606
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 181/353 (51%), Gaps = 15/353 (4%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
++ R +FD MP RDVV+W +I G A + A + EM P+ FTLSS+L
Sbjct: 61 VEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKS 120
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCN-RVEHSLRAFYLLPYRDAIS 304
+ G +HG ++ G +G +++ +++++MYA C+ +E + F + ++ ++
Sbjct: 121 CRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVT 180
Query: 305 WNSIIAGCVQNGKFDQGIGFFRQML--KAKVKPMQVSFSSVIPACAHLTALNLGKQLHGC 362
W ++I G G G+ ++QML A+V P ++ + + A A + ++ GKQ+H
Sbjct: 181 WTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA--VRASASIDSVTTGKQIHAS 238
Query: 363 IIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDA 422
+I+ GF N + +S++D+Y +CG + A++ F ++E +D++ W +I + +A
Sbjct: 239 VIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELE-RSDSSEA 297
Query: 423 VSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFR--IAPGLEHYAAV 480
+ +F++ G P F +++ AC++ ++ G + + FR +E A+
Sbjct: 298 LLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRI---FRRGFNKNVELANAL 354
Query: 481 ADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAH----KSVELAEKVV 529
D+ + G + ++ + + W++++ +H ++VEL +K+V
Sbjct: 355 IDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMV 407
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 125/253 (49%), Gaps = 5/253 (1%)
Query: 273 IGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAK 332
+ ++LI Y + VE + F +P RD ++W ++I G + + F +M+K
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 333 VKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCG-NIKMA 391
P + + SSV+ +C ++ L G +HG +++LG + + ++ +++++MYA C ++ A
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 392 RYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM-LEDGVRPCYVAFMAVLTACSH 450
IF I+ ++ V WT +I G G + + ++++M LE+ Y +AV + S
Sbjct: 167 CLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASI 226
Query: 451 AGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWS 510
+ + + +++ F+ L ++ DL R G L EA + M + + W+
Sbjct: 227 DSVTTGKQIHASVIKRGFQ--SNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLIT-WN 283
Query: 511 TLLAACRAHKSVE 523
TL++ S E
Sbjct: 284 TLISELERSDSSE 296
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 318 bits (816), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 174/521 (33%), Positives = 277/521 (53%), Gaps = 51/521 (9%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDEN--PQRGKGCKC----------EIDS 188
G L N+L++MY K + SANKVF + R + C + ++
Sbjct: 100 GFCASLPVNNSLIDMYGKCSDTL---SANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEA 156
Query: 189 VRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSIL-PIFA 247
VF MP R +WN +I+G+A G L + +EM + + KPD +T SS++ A
Sbjct: 157 ALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSA 216
Query: 248 EHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAK------------------------ 283
+ +VV G +H +++G+ V +S++ Y K
Sbjct: 217 DSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNS 276
Query: 284 ----CNRV---EHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPM 336
C ++ E +L F+L P ++ ++W ++I G +NG +Q + FF +M+K+ V
Sbjct: 277 IIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSD 336
Query: 337 QVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFD 396
++ +V+ AC+ L L GK +HGC+I GF ++ ++LV++YAKCG+IK A F
Sbjct: 337 HFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFG 396
Query: 397 KIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDE 456
I +D+V+W ++ +HG A A+ L++ M+ G++P V F+ +LT CSH+GLV+E
Sbjct: 397 DIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEE 456
Query: 457 GWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPT----GSVWSTL 512
G F SM KD+RI ++H + D+ GR G L EA D + T S W TL
Sbjct: 457 GCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETL 516
Query: 513 LAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLK 572
L AC H EL +V + + +P ++VL+SN+Y + RWK+ +R M +G+K
Sbjct: 517 LGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMK 576
Query: 573 KTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQM 613
KTP CSWIE+GN+V TF+ GD SHP ++++E LN L +M
Sbjct: 577 KTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQHEM 617
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 195/426 (45%), Gaps = 77/426 (18%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
I S R+VFD MP D V+WNT++ ++ G+ +EA+ + ++ KPD ++ ++IL
Sbjct: 20 IASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILST 79
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKC------NRV------------ 287
A +V G +I IR GF + + +SLIDMY KC N+V
Sbjct: 80 CASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEV 139
Query: 288 ---------------EHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAK 332
E +L F +P R A +WN +I+G GK + + F++ML+++
Sbjct: 140 TWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESE 199
Query: 333 VKPMQVSFSSVIPAC-AHLTALNLGKQLHGCIIRLGF--------------------DD- 370
KP +FSS++ AC A + + G+ +H +++ G+ DD
Sbjct: 200 FKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDA 259
Query: 371 ----------NKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHAL 420
+ +S++D K G + A +F +++V WT +I G +G
Sbjct: 260 MRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGE 319
Query: 421 DAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYA-- 478
A+ F +M++ GV + A+ AVL ACS L+ G M I G + YA
Sbjct: 320 QALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHG-----KMIHGCLIHCGFQGYAYV 374
Query: 479 --AVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILL-- 534
A+ +L + G ++EA ++ + S W+T+L A H + A K+ D ++
Sbjct: 375 GNALVNLYAKCGDIKEADRAFGDIANKDLVS-WNTMLFAFGVHGLADQALKLYDNMIASG 433
Query: 535 VDPENM 540
+ P+N+
Sbjct: 434 IKPDNV 439
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 142/342 (41%), Gaps = 61/342 (17%)
Query: 275 SSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVK 334
+S I AK R+ + + F +P D ++WN+++ + G + I F Q+ + K
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 335 PMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYI 394
P SF++++ CA L + G+++ +IR GF + + +SL+DMY KC + A +
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 395 FDKI--ETRDMV-------------------------------AWTAIIMGCAMHGHALD 421
F + ++R+ V AW +I G A G
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES 187
Query: 422 AVSLFEKMLEDGVRPCYVAFMAVLTACS------------HAGLVDEGWKYFNSMEKDFR 469
+SLF++MLE +P F +++ ACS HA ++ GW
Sbjct: 188 CLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGW----------- 236
Query: 470 IAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVV 529
+ +E +V + G ++A + ++ + S W++++ AC + EK +
Sbjct: 237 -SSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVS-WNSIIDACM---KIGETEKAL 291
Query: 530 DKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGL 571
+ L +N+ + M Y + A + + M G+
Sbjct: 292 EVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGV 333
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 318 bits (815), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 174/498 (34%), Positives = 267/498 (53%), Gaps = 26/498 (5%)
Query: 107 ISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGFG 166
++P R +L+ A T G DL N+L+N Y K
Sbjct: 159 VTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAK-------- 210
Query: 167 SANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVRE 226
++ F E +F ++ +DV+SW+TVIA QNG EAL + +
Sbjct: 211 --SRAFKE--------------AVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFND 254
Query: 227 MGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNR 286
M DD +P+ T+ +L A D+ +G + H AIR G + +V + ++L+DMY KC
Sbjct: 255 MMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFS 314
Query: 287 VEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQML-KAKVKPMQVSFSSVIP 345
E + F +P +D +SW ++I+G NG + I F ML + +P + V+
Sbjct: 315 PEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLG 374
Query: 346 ACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVA 405
+C+ L L K H +I+ GFD N FI +SLV++Y++CG++ A +F+ I +D V
Sbjct: 375 SCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVV 434
Query: 406 WTAIIMGCAMHGHALDAVSLFEKMLEDG-VRPCYVAFMAVLTACSHAGLVDEGWKYFNSM 464
WT++I G +HG A+ F M++ V+P V F+++L+ACSHAGL+ EG + F M
Sbjct: 435 WTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLM 494
Query: 465 EKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVEL 524
D+R+AP LEHYA + DLLGR G L+ A + M PT + TLL ACR H++ E+
Sbjct: 495 VNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEM 554
Query: 525 AEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGN 584
AE V K+ ++ + G Y+LMSN+Y W++ KLR ++ +G+KK A S IEI
Sbjct: 555 AETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRR 614
Query: 585 KVHTFLAGDKSHPYYDKI 602
KVH F+A D+ HP + +
Sbjct: 615 KVHRFVADDELHPEKEPV 632
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/344 (31%), Positives = 181/344 (52%), Gaps = 16/344 (4%)
Query: 190 RKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEH 249
R++F M R + WNT++ ++ + E L M D+ KPD+FTL L E
Sbjct: 14 RQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGEL 73
Query: 250 VDVVKGMEIHGYAIRH-GFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSI 308
+V G IHG+ + D+++GSSLI MY KC R+ +LR F L D ++W+S+
Sbjct: 74 REVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSM 133
Query: 309 IAGCVQNGKFDQGIGFFRQMLKAK-VKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLG 367
++G +NG Q + FFR+M+ A V P +V+ +++ AC L+ LG+ +HG +IR G
Sbjct: 134 VSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRG 193
Query: 368 FDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFE 427
F ++ + +SL++ YAK K A +F I +D+++W+ +I +G A +A+ +F
Sbjct: 194 FSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFN 253
Query: 428 KMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEH----YAAVADL 483
M++DG P + VL AC+ A +++G K + I GLE A+ D+
Sbjct: 254 DMMDDGTEPNVATVLCVLQACAAAHDLEQGRK-----THELAIRKGLETEVKVSTALVDM 308
Query: 484 LGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACR----AHKSVE 523
+ EEAY S + + S W L++ AH+S+E
Sbjct: 309 YMKCFSPEEAYAVFSRIPRKDVVS-WVALISGFTLNGMAHRSIE 351
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 162/412 (39%), Positives = 246/412 (59%), Gaps = 6/412 (1%)
Query: 183 KC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
KC +D R VFD M RDV++W +I G ++G AL++ R M + ++P++ T++S
Sbjct: 265 KCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIAS 324
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
++ + + + V G +HG+A+R D+ I +SLI MYAKC RV+ R F
Sbjct: 325 LVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYH 384
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
W++IIAGCVQN +G F++M + V+P + +S++PA A L L +H
Sbjct: 385 TGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHC 444
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIE----TRDMVAWTAIIMGCAMHG 417
+ + GF + A+ LV +Y+KCG ++ A IF+ I+ ++D+V W A+I G MHG
Sbjct: 445 YLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHG 504
Query: 418 HALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHY 477
+A+ +F +M+ GV P + F + L ACSH+GLV+EG F M + ++ HY
Sbjct: 505 DGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHY 564
Query: 478 AAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDP 537
+ DLLGRAGRL+EAY+ I+ + +PT +VW LLAAC H++V+L E +K+ ++P
Sbjct: 565 TCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEP 624
Query: 538 ENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEI-GNKVHT 588
EN G YVL++NIY+A RWKD K+R M + GL+K P S IEI N V T
Sbjct: 625 ENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRSNSVDT 676
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 201/429 (46%), Gaps = 20/429 (4%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLK--PDSFTLSSIL 243
I RK+F+ MP ++S+N VI + G++ +A+ + M + +K PD +T +
Sbjct: 65 ITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVA 124
Query: 244 PIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAI 303
E + G+ +HG +R F D ++ ++L+ MY +VE + F ++ RD I
Sbjct: 125 KAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVI 184
Query: 304 SWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCI 363
SWN++I+G +NG + + F M+ V + S++P C HL L +G+ +H +
Sbjct: 185 SWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLV 244
Query: 364 IRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAV 423
D + ++LV+MY KCG + AR++FD++E RD++ WT +I G G +A+
Sbjct: 245 EEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENAL 304
Query: 424 SLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDE-----GWKYFNSMEKDFRIAPGLEHYA 478
L M +GVRP V ++++ C A V++ GW + D I L
Sbjct: 305 ELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSL---- 360
Query: 479 AVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPE 538
+ + R++ + S TG WS ++A C ++ V A + ++ D E
Sbjct: 361 --ISMYAKCKRVDLCFRVFSGASKYHTGP-WSAIIAGCVQNELVSDALGLFKRMRREDVE 417
Query: 539 -NMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKT--PACSWIEIGNKVHTFLAGDKS 595
N+ + Y+A + A + ++ G + A + + +K T + +
Sbjct: 418 PNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTL---ESA 474
Query: 596 HPYYDKINE 604
H ++ I E
Sbjct: 475 HKIFNGIQE 483
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 148/311 (47%), Gaps = 26/311 (8%)
Query: 145 DLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSW 204
D Y NAL+ MY N G +++ R VFD+M RDV+SW
Sbjct: 151 DKYVQNALLAMY---MNFG---------------------KVEMARDVFDVMKNRDVISW 186
Query: 205 NTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIR 264
NT+I+G +NG +AL M M ++ + D T+ S+LP+ D+ G +H
Sbjct: 187 NTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEE 246
Query: 265 HGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGF 324
+ + ++L++MY KC R++ + F + RD I+W +I G ++G + +
Sbjct: 247 KRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALEL 306
Query: 325 FRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAK 384
R M V+P V+ +S++ C +N GK LHG +R + I +SL+ MYAK
Sbjct: 307 CRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAK 366
Query: 385 CGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAV 444
C + + +F W+AII GC + DA+ LF++M + V P ++
Sbjct: 367 CKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSL 426
Query: 445 LTACSHAGLVD 455
L A +A L D
Sbjct: 427 LPA--YAALAD 435
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 134/256 (52%), Gaps = 6/256 (2%)
Query: 241 SILPIFAEHVDVVKGMEIHGYAIRHG-FDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPY 299
S+L FA + K +H + I G G + S+L YA C + ++ + F +P
Sbjct: 20 SLLNHFAATQSISKTKALHCHVITGGRVSGHIL--STLSVTYALCGHITYARKLFEEMPQ 77
Query: 300 RDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVK--PMQVSFSSVIPACAHLTALNLGK 357
+S+N +I V+ G + I F +M+ VK P ++ V A L ++ LG
Sbjct: 78 SSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGL 137
Query: 358 QLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHG 417
+HG I+R F +K++ ++L+ MY G ++MAR +FD ++ RD+++W +I G +G
Sbjct: 138 VVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNG 197
Query: 418 HALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHY 477
+ DA+ +F+ M+ + V + +++L C H ++ G + + + ++ R+ +E
Sbjct: 198 YMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMG-RNVHKLVEEKRLGDKIEVK 256
Query: 478 AAVADLLGRAGRLEEA 493
A+ ++ + GR++EA
Sbjct: 257 NALVNMYLKCGRMDEA 272
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 316 bits (810), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 157/446 (35%), Positives = 261/446 (58%), Gaps = 3/446 (0%)
Query: 183 KCE-IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
KCE ++ K+FD R+ ++W+ ++ G +QNG EA+ + M +KP +T+
Sbjct: 268 KCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVG 327
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
+L ++ + +G ++H + ++ GF+ +F ++L+DMYAK + + + F L RD
Sbjct: 328 VLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERD 387
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
W S+I+G VQN ++ + +R+M A + P + +SV+ AC+ L L LGKQ+HG
Sbjct: 388 VALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHG 447
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALD 421
I+ GF I S+L MY+KCG+++ +F + +D+V+W A+I G + +G +
Sbjct: 448 HTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDE 507
Query: 422 AVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVA 481
A+ LFE+ML +G+ P V F+ +++ACSH G V+ GW YFN M + P ++HYA +
Sbjct: 508 ALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMV 567
Query: 482 DLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMG 541
DLL RAG+L+EA +FI + I +W LL+AC+ H EL +K++ +
Sbjct: 568 DLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESS 627
Query: 542 AYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDK 601
YV +S IY+A R +D ++ HMR+ G+ K CSWIE+ N+ H F+ GD HP ++
Sbjct: 628 TYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEE 687
Query: 602 INEALNILLEQMEKEGY--VLDTSEV 625
+ + ++ QM +EG+ VLD+S V
Sbjct: 688 TKDLVCLVSRQMIEEGFVTVLDSSFV 713
Score = 169 bits (427), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 129/504 (25%), Positives = 224/504 (44%), Gaps = 73/504 (14%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
MRA I P + + KA + D+Y +L+ MYCK
Sbjct: 109 MRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCK--- 165
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
G ++ KVF MP R+ +W+T+++G A G EA+
Sbjct: 166 -AGL--------------------VEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAI 204
Query: 222 DMV------REMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGS 275
+ +E G D + +++L A + V G +IH I++G G V + +
Sbjct: 205 KVFNLFLREKEEGSD----SDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSN 260
Query: 276 SLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKP 335
+L+ MY+KC + + + F R++I+W++++ G QNG+ + + F +M A +KP
Sbjct: 261 ALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKP 320
Query: 336 MQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIF 395
+ + V+ AC+ + L GKQLH +++LGF+ + F ++LVDMYAK G + AR F
Sbjct: 321 SEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGF 380
Query: 396 DKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVD 455
D ++ RD+ WT++I G + +A+ L+ +M G+ P +VL ACS ++
Sbjct: 381 DCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLE 440
Query: 456 EG-------------------------WKYFNSMEKD---FRIAPGLE--HYAAVADLLG 485
G + S+E FR P + + A+ L
Sbjct: 441 LGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLS 500
Query: 486 RAGRLEEAYDFISNM---GIQPTGSVWSTLLAACRAHKSVELA----EKVVDKILLVDPE 538
G+ +EA + M G++P + +++AC VE + D+I L DP+
Sbjct: 501 HNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGL-DPK 559
Query: 539 NMGAYVLMSNIYSAAKRWKDAAKL 562
+ Y M ++ S A + K+A +
Sbjct: 560 -VDHYACMVDLLSRAGQLKEAKEF 582
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 189/390 (48%), Gaps = 49/390 (12%)
Query: 183 KC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREA---LDMVREMGDDKLKPDSFT 238
KC ++ +F+ + +DVVSWN++I G +QNG + + + REM + P+++T
Sbjct: 61 KCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYT 120
Query: 239 LSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLP 298
L+ I + G + H ++ GD+++ +SL+ MY K VE L+ F +P
Sbjct: 121 LAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP 180
Query: 299 YRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVS--FSSVIPACAHLTALNLG 356
R+ +W+++++G G+ ++ I F L+ K + F++V+ + A + LG
Sbjct: 181 ERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLG 240
Query: 357 KQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMH 416
+Q+H I+ G ++++LV MY+KC ++ A +FD R+ + W+A++ G + +
Sbjct: 241 RQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQN 300
Query: 417 GHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEH 476
G +L+AV LF +M G++P + VL ACS ++EG K +S F + G E
Sbjct: 301 GESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEG-KQLHS----FLLKLGFER 355
Query: 477 Y----AAVADLLGRAGRLEEA----------------------------------YDFIS 498
+ A+ D+ +AG L +A Y +
Sbjct: 356 HLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMK 415
Query: 499 NMGIQPTGSVWSTLLAACRAHKSVELAEKV 528
GI P +++L AC + ++EL ++V
Sbjct: 416 TAGIIPNDPTMASVLKACSSLATLELGKQV 445
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 163/377 (43%), Gaps = 54/377 (14%)
Query: 231 KLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHS 290
+L P + TL L ++ ++V G +HG IR G + + L++ YAKC ++ +
Sbjct: 9 ELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKA 68
Query: 291 LRAFYLLPYRDAISWNSIIAGCVQNGKFDQG---IGFFRQMLKAKVKPMQVSFSSVIPAC 347
F + +D +SWNS+I G QNG + FR+M + P + + + A
Sbjct: 69 HSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAE 128
Query: 348 AHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWT 407
+ L + +G+Q H ++++ + ++ +SLV MY K G ++ +F + R+ W+
Sbjct: 129 SSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWS 188
Query: 408 AIIMGCAMHGHALDAVSLFEKML---EDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSM 464
++ G A G +A+ +F L E+G YV F AVL++ + V G +
Sbjct: 189 TMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHC-- 245
Query: 465 EKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVEL 524
I GL + A+++ L T+ + C +S+
Sbjct: 246 ---ITIKNGLLGFVALSNAL-------------------------VTMYSKC---ESLNE 274
Query: 525 AEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTP--------A 576
A K+ D N + M YS +A KL M S G+K + A
Sbjct: 275 ACKMFDS---SGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNA 331
Query: 577 CS---WIEIGNKVHTFL 590
CS ++E G ++H+FL
Sbjct: 332 CSDICYLEEGKQLHSFL 348
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 315 bits (806), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 177/530 (33%), Positives = 281/530 (53%), Gaps = 37/530 (6%)
Query: 183 KC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
KC +++ RKVFD + +DV +WN++I G Q G +A ++ M D L+P+ T ++
Sbjct: 399 KCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNT 458
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
+ I GY I++G +G+ +D++ R+E + R+
Sbjct: 459 M---------------ISGY-IKNGDEGEA------MDLF---QRMEKDGKV-----QRN 488
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
+WN IIAG +QNGK D+ + FR+M ++ P V+ S++PACA+L + +++HG
Sbjct: 489 TATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHG 548
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALD 421
C++R D + ++L D YAK G+I+ +R IF +ET+D++ W ++I G +HG
Sbjct: 549 CVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGP 608
Query: 422 AVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVA 481
A++LF +M G+ P +++ A G VDEG K F S+ D+ I P LEH +A+
Sbjct: 609 ALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMV 668
Query: 482 DLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMG 541
L GRA RLEEA FI M IQ +W + L CR H +++A + + ++PEN
Sbjct: 669 YLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTA 728
Query: 542 AYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDK 601
++S IY+ + + + R LKK SWIE+ N +HTF GD+S D
Sbjct: 729 TESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTD- 787
Query: 602 INEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAF--XXXXXXXXXX 659
L L+E+M + D +++E + + HSE+ A+AF
Sbjct: 788 ---VLYPLVEKMSRLDNRSDQYNGELWIEEEGREETCGIHSEKFAMAFGLISSSGASKTT 844
Query: 660 XRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
R++KN+R+C DCH K++SK G +I++ D HHF NG CSC DYW
Sbjct: 845 IRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 156/338 (46%), Gaps = 35/338 (10%)
Query: 183 KC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
KC E+D K F M RDV++WN+V+ QNG EA+++V+EM + + P T +
Sbjct: 228 KCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNI 287
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
++ + + M++ G DVF
Sbjct: 288 LIGGYNQLGKCDAAMDLMQKMETFGITADVF----------------------------- 318
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
+W ++I+G + NG Q + FR+M A V P V+ S + AC+ L +N G ++H
Sbjct: 319 --TWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHS 376
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALD 421
+++GF D+ + +SLVDMY+KCG ++ AR +FD ++ +D+ W ++I G G+
Sbjct: 377 IAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGK 436
Query: 422 AVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVA 481
A LF +M + +RP + + +++ G E F MEKD ++ + +
Sbjct: 437 AYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLII 496
Query: 482 DLLGRAGRLEEAYDFISNMGIQ---PTGSVWSTLLAAC 516
+ G+ +EA + M P +LL AC
Sbjct: 497 AGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 160/356 (44%), Gaps = 44/356 (12%)
Query: 182 CKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
C C D+ RKVFD M R++ +W+ +I ++ +RE + R M D + PD F
Sbjct: 128 CGCIADA-RKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPK 186
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
IL A DV G IH I+ G + + +S++ +YAKC ++ + + F + RD
Sbjct: 187 ILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERD 246
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
I+WNS++ QNGK ++ + ++M K + P V+++ +I
Sbjct: 247 VIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGG--------------- 291
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIE----TRDMVAWTAIIMGCAMHG 417
Y + G A + K+E T D+ WTA+I G +G
Sbjct: 292 --------------------YNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNG 331
Query: 418 HALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHY 477
A+ +F KM GV P V M+ ++ACS ++++G + + K I L
Sbjct: 332 MRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGN 391
Query: 478 AAVADLLGRAGRLEEA---YDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVD 530
+ V D+ + G+LE+A +D + N + S+ + A K+ EL ++ D
Sbjct: 392 SLV-DMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQD 446
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 148/306 (48%), Gaps = 9/306 (2%)
Query: 270 DVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQML 329
DVF+ + L+ MYAKC + + + F + R+ +W+++I + ++ + FR M+
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMM 173
Query: 330 KAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIK 389
K V P F ++ CA+ + GK +H +I+LG +++S++ +YAKCG +
Sbjct: 174 KDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELD 233
Query: 390 MARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACS 449
A F ++ RD++AW ++++ +G +AV L ++M ++G+ P V + ++ +
Sbjct: 234 FATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYN 293
Query: 450 HAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM---GIQPTG 506
G D ME F I + + A+ L G +A D M G+ P
Sbjct: 294 QLGKCDAAMDLMQKMET-FGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNA 352
Query: 507 SVWSTLLAACRAHKSVELAEKV---VDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLR 563
+ ++AC K + +V K+ +D +G ++ ++YS + +DA K+
Sbjct: 353 VTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLV--DMYSKCGKLEDARKVF 410
Query: 564 IHMRSK 569
+++K
Sbjct: 411 DSVKNK 416
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 165/475 (34%), Positives = 265/475 (55%), Gaps = 25/475 (5%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G + D Y +AL++MY K C C ++ R+VF MP +
Sbjct: 238 GFELDEYVNSALVDMYGK-----------------------CDC-LEVAREVFQKMPRKS 273
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
+V+WN++I G G + ++++ M + +P TL+SIL + +++ G IHG
Sbjct: 274 LVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHG 333
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQ 320
Y IR + D+++ SLID+Y KC + F A SWN +I+ + G + +
Sbjct: 334 YVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFK 393
Query: 321 GIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVD 380
+ + QM+ VKP V+F+SV+PAC+ L AL GKQ+H I + ++ + S+L+D
Sbjct: 394 AVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLD 453
Query: 381 MYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVA 440
MY+KCGN K A IF+ I +D+V+WT +I HG +A+ F++M + G++P V
Sbjct: 454 MYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVT 513
Query: 441 FMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM 500
+AVL+AC HAGL+DEG K+F+ M + I P +EHY+ + D+LGRAGRL EAY+ I
Sbjct: 514 LLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQT 573
Query: 501 G-IQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDA 559
+ STL +AC H L +++ ++ P++ Y+++ N+Y++ + W A
Sbjct: 574 PETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAA 633
Query: 560 AKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQME 614
++R+ M+ GL+K P CSWIE+ +KV F A D+SH + + E L +L ME
Sbjct: 634 RRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLSGHME 688
Score = 182 bits (463), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 202/411 (49%), Gaps = 26/411 (6%)
Query: 109 PTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGFGSA 168
P FP+++KA G D+ A++L+ MY K
Sbjct: 105 PDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFN-------- 156
Query: 169 NKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMG 228
+F+ + Q VFD MP RDV SWNTVI+ Q+G +AL++ M
Sbjct: 157 --LFENSLQ--------------VFDEMPERDVASWNTVISCFYQSGEAEKALELFGRME 200
Query: 229 DDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVE 288
+P+S +L+ + + + + +G EIH ++ GF+ D ++ S+L+DMY KC+ +E
Sbjct: 201 SSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLE 260
Query: 289 HSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACA 348
+ F +P + ++WNS+I G V G + +M+ +P Q + +S++ AC+
Sbjct: 261 VAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACS 320
Query: 349 HLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTA 408
L GK +HG +IR + + ++ SL+D+Y KCG +A +F K + +W
Sbjct: 321 RSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNV 380
Query: 409 IIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDF 468
+I G+ AV ++++M+ GV+P V F +VL ACS +++G + S+ +
Sbjct: 381 MISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISES- 439
Query: 469 RIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAH 519
R+ +A+ D+ + G +EA+ +++ + S W+ +++A +H
Sbjct: 440 RLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVS-WTVMISAYGSH 489
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 193/378 (51%), Gaps = 39/378 (10%)
Query: 188 SVRKVFDLMPAR-DVVSWNTVIAGNAQNGMFREALDMVREMGDDKL-KPDSFTLSSILPI 245
S R VF+ R DV WN++++G ++N MF + L++ + + + + PDSFT +++
Sbjct: 57 SARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKA 116
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISW 305
+ G IH ++ G+ DV + SSL+ MYAK N E+SL+ F +P RD SW
Sbjct: 117 YGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASW 176
Query: 306 NSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIR 365
N++I+ Q+G+ ++ + F +M + +P VS + I AC+ L L GK++H ++
Sbjct: 177 NTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVK 236
Query: 366 LGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSL 425
GF+ ++++ S+LVDMY KC +++AR +F K+ + +VAW ++I G G + V +
Sbjct: 237 KGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEI 296
Query: 426 FEKMLEDGVRPCYVAFMAVLTACSHA--------------------------GLVDEGWK 459
+M+ +G RP ++L ACS + L+D +K
Sbjct: 297 LNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFK 356
Query: 460 ---------YFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWS 510
F+ +KD +A + +G + E YD + ++G++P ++
Sbjct: 357 CGEANLAETVFSKTQKD--VAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFT 414
Query: 511 TLLAACRAHKSVELAEKV 528
++L AC ++E +++
Sbjct: 415 SVLPACSQLAALEKGKQI 432
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 308 bits (789), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 183/585 (31%), Positives = 310/585 (52%), Gaps = 42/585 (7%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
GL +Y ANA+++MY + + G+A VF+ + ++
Sbjct: 187 GLHCSIYVANAVISMYGRCHD----GAAAY-----------------EAWTVFEAIKFKN 225
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKG----- 255
+V+WN++IA + ++A+ + M D + D TL +I + D+V
Sbjct: 226 LVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKC 285
Query: 256 -MEIHGYAIRHGFDGDVFIGSSLIDMYAK-CNRVEHSLRAFYLLPY-RDAISWNSIIAGC 312
+++H ++ G + ++LI +Y++ + F + + RD ++WN II
Sbjct: 286 CLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAF 345
Query: 313 VQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNK 372
++ I F Q+ + K+ P +FSSV+ ACA L +H +I+ GF +
Sbjct: 346 AVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADT 404
Query: 373 FIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLED 432
+ +SL+ YAKCG++ + +FD +++RD+V+W +++ ++HG + +F+KM
Sbjct: 405 VLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM--- 461
Query: 433 GVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEE 492
+ P F+A+L+ACSHAG V+EG + F SM + P L HYA V D+L RA R E
Sbjct: 462 DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAE 521
Query: 493 AYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKIL-LVDPENMGAYVLMSNIYS 551
A + I M + P VW LL +CR H + L + DK+ LV+P N +Y+ MSNIY+
Sbjct: 522 AEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYN 581
Query: 552 AAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLE 611
A + +A M + ++K P SW EIGNKVH F +G + P + + L L+
Sbjct: 582 AEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLIS 641
Query: 612 QMEKEGYV--LDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXX-----XXRVIK 664
+++ GYV + ++ + +++ + +LL HSE+LA+AF +++K
Sbjct: 642 WLKEMGYVPEMRSASQDIEDEEQEEDNLLH-HSEKLALAFAVMEGRKSSDCGVNLIQIMK 700
Query: 665 NIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
N R+C+DCH +K SK++G+EI++RD++RFHHF + SCSC DYW
Sbjct: 701 NTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 120/512 (23%), Positives = 214/512 (41%), Gaps = 98/512 (19%)
Query: 149 ANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVI 208
AN L+NMY K N I R+VFD MP R+VVSW +I
Sbjct: 99 ANFLINMYAKCGN------------------------ILYARQVFDTMPERNVVSWTALI 134
Query: 209 AGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFD 268
G Q G +E + M P+ FTLSS+L G ++HG A++ G
Sbjct: 135 TGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLT----SCRYEPGKQVHGLALKLGLH 189
Query: 269 GDVFIGSSLIDMYAKCNRVEHSLRA---FYLLPYRDAISWNSIIAG--CVQNGKFDQGIG 323
+++ +++I MY +C+ + A F + +++ ++WNS+IA C GK + IG
Sbjct: 190 CSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGK--KAIG 247
Query: 324 FFRQMLKAKV---KPMQVSFSSVIPACAHLTALNLGK---QLHGCIIRLGFDDNKFIASS 377
F +M V + ++ S + + L + K QLH ++ G +A++
Sbjct: 248 VFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATA 307
Query: 378 LVDMYAKC--GNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVR 435
L+ +Y++ + + RD+VAW II A++ A+ LF ++ ++ +
Sbjct: 308 LIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPE-RAIHLFGQLRQEKLS 366
Query: 436 PCYVAFMAVLTACS-----------HAGLVDEG--------------WKYFNSMEKDFRI 470
P + F +VL AC+ HA ++ G + S++ R+
Sbjct: 367 PDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRV 426
Query: 471 APGLEHYAAVA-DLLGRA----GRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELA 525
++ V+ + + +A G+++ M I P + + LL+AC VE
Sbjct: 427 FDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSATFIALLSACSHAGRVEEG 486
Query: 526 EKVVDKILLVDPE---NMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTP----ACS 578
++ + + PE + Y + ++ S A+R+ +A ++ +K+ P A
Sbjct: 487 LRIF-RSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEV--------IKQMPMDPDAVV 537
Query: 579 WIEI-------GNKVHTFLAGDKSHPYYDKIN 603
WI + GN LA DK + N
Sbjct: 538 WIALLGSCRKHGNTRLGKLAADKLKELVEPTN 569
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 106/193 (54%), Gaps = 10/193 (5%)
Query: 247 AEHVDVVKGMEIHGYAIRHGF--DGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS 304
AE +++ G+ +H + + H + +V + + LI+MYAKC + ++ + F +P R+ +S
Sbjct: 70 AEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVS 129
Query: 305 WNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCII 364
W ++I G VQ G +G F ML + P + + SSV+ +C + GKQ+HG +
Sbjct: 130 WTALITGYVQAGNEQEGFCLFSSML-SHCFPNEFTLSSVLTSCRY----EPGKQVHGLAL 184
Query: 365 RLGFDDNKFIASSLVDMYAKCGNIKMAR---YIFDKIETRDMVAWTAIIMGCAMHGHALD 421
+LG + ++A++++ MY +C + A +F+ I+ +++V W ++I
Sbjct: 185 KLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKK 244
Query: 422 AVSLFEKMLEDGV 434
A+ +F +M DGV
Sbjct: 245 AIGVFMRMHSDGV 257
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 337 QVSFSSVIPACAHLTALNLGKQLHGCIIR--LGFDDNKFIASSLVDMYAKCGNIKMARYI 394
Q +++++ ACA L G LH ++ + N +A+ L++MYAKCGNI AR +
Sbjct: 59 QQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQV 118
Query: 395 FDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSH 450
FD + R++V+WTA+I G G+ + LF ML P +VLT+C +
Sbjct: 119 FDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCRY 173
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/484 (33%), Positives = 264/484 (54%), Gaps = 33/484 (6%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G++FD+ AL++MY K +L K+F LMP+++
Sbjct: 282 GMEFDIVVRTALLDMYAKNGSL------------------------KEAIKLFSLMPSKN 317
Query: 201 VVSWNTVIAGNAQ-----NGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKG 255
VV++N +I+G Q + EA + +M L+P T S +L + + G
Sbjct: 318 VVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYG 377
Query: 256 MEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQN 315
+IH ++ F D FIGS+LI++YA E ++ F +D SW S+I VQN
Sbjct: 378 RQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQN 437
Query: 316 GKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIA 375
+ + FRQ+ + ++P + + S ++ ACA AL+ G+Q+ G I+ G D +
Sbjct: 438 EQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVK 497
Query: 376 SSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVR 435
+S + MYAK GN+ +A +F +++ D+ ++A+I A HG A +A+++FE M G++
Sbjct: 498 TSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIK 557
Query: 436 PCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYD 495
P AF+ VL AC H GLV +G KYF M+ D+RI P +H+ + DLLGR GRL +A +
Sbjct: 558 PNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAEN 617
Query: 496 FISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKR 555
I + G Q W LL++CR +K + ++V ++++ ++PE G+YVL+ NIY+ +
Sbjct: 618 LILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGV 677
Query: 556 WKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEK 615
A ++R MR +G+KK PA SWI IGN+ H+F D SHP ++ + +LE M+
Sbjct: 678 NSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPS----SQMIYTMLETMDN 733
Query: 616 EGYV 619
+V
Sbjct: 734 VDFV 737
Score = 159 bits (401), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 128/475 (26%), Positives = 220/475 (46%), Gaps = 51/475 (10%)
Query: 182 CKC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLS 240
CKC E+ R++FD MP R+++S+N++I+G Q G + +A+++ E + LK D FT +
Sbjct: 93 CKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYA 152
Query: 241 SILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR 300
L E D+ G +HG + +G VF+ + LIDMY+KC +++ ++ F R
Sbjct: 153 GALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDER 212
Query: 301 DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNL----- 355
D +SWNS+I+G V+ G ++ + +M + + + SV+ AC +NL
Sbjct: 213 DQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKAC----CINLNEGFI 268
Query: 356 --GKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGC 413
G +H +LG + + + ++L+DMYAK G++K A +F + ++++V + A+I G
Sbjct: 269 EKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGF 328
Query: 414 AMHGHALDAVS-----LFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYF-----NS 463
D S LF M G+ P F VL ACS A ++ G + N+
Sbjct: 329 LQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNN 388
Query: 464 MEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVE 523
+ D I +A+ +L G E+ ++ Q S W++++ ++ +E
Sbjct: 389 FQSDEFIG------SALIELYALMGSTEDGMQCFASTSKQDIAS-WTSMIDCHVQNEQLE 441
Query: 524 LAEKVVDKILL--VDPENMGAYVLMS-----------------NIYSAAKRWKDAAKLRI 564
A + ++ + PE ++MS I S + I
Sbjct: 442 SAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSI 501
Query: 565 HMRSKGLKKTPACS-WIEIGNK-VHTFLAGDKSHPYYDKINEALNILLEQMEKEG 617
M +K A +IE+ N V T+ A S + NEALNI E M+ G
Sbjct: 502 SMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNI-FESMKTHG 555
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 156/327 (47%), Gaps = 49/327 (14%)
Query: 247 AEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWN 306
A+ VV G HG+ I+ + +++ ++L++MY KC + + + F +P R+ IS+N
Sbjct: 58 AKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFN 117
Query: 307 SIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRL 366
S+I+G Q G ++Q + F + +A +K + +++ + C L+LG+ LHG ++
Sbjct: 118 SLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVN 177
Query: 367 GFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLF 426
G F+ + L+DMY+KCG + A +FD+ + RD V+W ++I G G A + ++L
Sbjct: 178 GLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLL 237
Query: 427 EKMLEDGVRPCYVAFMAVLTACS---HAGLVDEGWK---YFNSMEKDFRIAPGLEHYAAV 480
KM DG+ A +VL AC + G +++G Y + +F I A+
Sbjct: 238 AKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVV----RTAL 293
Query: 481 ADLLGRAGRLEEAYDFISNM---------------------------------------G 501
D+ + G L+EA S M G
Sbjct: 294 LDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRG 353
Query: 502 IQPTGSVWSTLLAACRAHKSVELAEKV 528
++P+ S +S +L AC A K++E ++
Sbjct: 354 LEPSPSTFSVVLKACSAAKTLEYGRQI 380
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 306 bits (783), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 168/512 (32%), Positives = 275/512 (53%), Gaps = 32/512 (6%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M+ G+ +P LLKA + GL D+Y NAL++ Y +
Sbjct: 108 MQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRC-- 165
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
GG G + K+F+ M RD VSWN+++ G + G R+A
Sbjct: 166 -GGLG-------------------VRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDA- 204
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMY 281
R + D+ + D + +++L +A ++ K E+ + + S+++ Y
Sbjct: 205 ---RRLFDEMPQRDLISWNTMLDGYARCREMSKAFEL----FEKMPERNTVSWSTMVMGY 257
Query: 282 AKCNRVEHSLRAF--YLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVS 339
+K +E + F LP ++ ++W IIAG + G + QM+ + +K +
Sbjct: 258 SKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAA 317
Query: 340 FSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIE 399
S++ AC L+LG ++H + R N ++ ++L+DMYAKCGN+K A +F+ I
Sbjct: 318 VISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIP 377
Query: 400 TRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWK 459
+D+V+W ++ G +HGH +A+ LF +M +G+RP V F+AVL +C+HAGL+DEG
Sbjct: 378 KKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGID 437
Query: 460 YFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAH 519
YF SMEK + + P +EHY + DLLGR GRL+EA + M ++P +W LL ACR H
Sbjct: 438 YFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMH 497
Query: 520 KSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSW 579
V++A++V+D ++ +DP + G Y L+SNIY+AA+ W+ A +R M+S G++K S
Sbjct: 498 NEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASS 557
Query: 580 IEIGNKVHTFLAGDKSHPYYDKINEALNILLE 611
+E+ + +H F DKSHP D+I + L L+E
Sbjct: 558 VELEDGIHEFTVFDKSHPKSDQIYQMLGSLIE 589
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 172/335 (51%), Gaps = 18/335 (5%)
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEH- 249
+VF+ + +V N++I +AQN +A + EM L D+FT +L +
Sbjct: 72 RVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQS 131
Query: 250 -VDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCN--RVEHSLRAFYLLPYRDAISWN 306
+ VVK M H + + G D+++ ++LID Y++C V +++ F + RD +SWN
Sbjct: 132 WLPVVKMM--HNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWN 189
Query: 307 SIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRL 366
S++ G V+ G+ F +M + + +S+++++ A ++ +L +
Sbjct: 190 SMLGGLVKAGELRDARRLFDEMPQRDL----ISWNTMLDGYARCREMSKAFELFEKMP-- 243
Query: 367 GFDDNKFIASSLVDMYAKCGNIKMARYIFDK--IETRDMVAWTAIIMGCAMHGHALDAVS 424
+ N S++V Y+K G+++MAR +FDK + +++V WT II G A G +A
Sbjct: 244 --ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADR 301
Query: 425 LFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLL 484
L ++M+ G++ A +++L AC+ +GL+ G + +S+ K + A+ D+
Sbjct: 302 LVDQMVASGLKFDAAAVISILAACTESGLLSLGMR-IHSILKRSNLGSNAYVLNALLDMY 360
Query: 485 GRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAH 519
+ G L++A+D +++ + S W+T+L H
Sbjct: 361 AKCGNLKKAFDVFNDIPKKDLVS-WNTMLHGLGVH 394
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 171/397 (43%), Gaps = 66/397 (16%)
Query: 257 EIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNG 316
++H IR D+ I LI + C + ++R F + + NS+I QN
Sbjct: 37 QLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNS 96
Query: 317 KFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIAS 376
+ Q F +M + + ++ ++ AC+ + L + K +H I +LG + ++ +
Sbjct: 97 QPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPN 156
Query: 377 SLVDMYAKCG--NIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGV 434
+L+D Y++CG ++ A +F+K+ RD V+W +++ G G DA LF++M
Sbjct: 157 ALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEM----- 211
Query: 435 RPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAY 494
L+ +N+M L+ YA R + +A+
Sbjct: 212 --------------PQRDLIS-----WNTM---------LDGYA-------RCREMSKAF 236
Query: 495 DFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAK 554
+ M + T S WST++ +E+A + DK+ L +N+ + ++ Y+
Sbjct: 237 ELFEKMPERNTVS-WSTMVMGYSKAGDMEMARVMFDKMPL-PAKNVVTWTIIIAGYAEKG 294
Query: 555 RWKDAAKLRIHMRSKGLK--------KTPACS---WIEIGNKVHTFLAGDK--SHPYYDK 601
K+A +L M + GLK AC+ + +G ++H+ L S+ Y
Sbjct: 295 LLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAY--- 351
Query: 602 INEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLL 638
LN LL+ K G + +V +D+ K+DL+
Sbjct: 352 ---VLNALLDMYAKCGNLKKAFDVFNDIP---KKDLV 382
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 306 bits (783), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 188/556 (33%), Positives = 284/556 (51%), Gaps = 63/556 (11%)
Query: 107 ISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGFG 166
+SP R F L+KAS+ L Y N+L+ Y + LG FG
Sbjct: 129 VSPDRQTFLYLMKASSFLSEVKQIHCHIIVSGC--LSLGNYLWNSLVKFYME---LGNFG 183
Query: 167 SANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVRE 226
A KVF MP DV S+N +I G A+ G EAL + +
Sbjct: 184 VAEKVFAR---------------------MPHPDVSSFNVMIVGYAKQGFSLEALKLYFK 222
Query: 227 MGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHG--FDGDVFIGSSLIDMYAKC 284
M D ++PD +T+ S+L D+ G +HG+ R G + ++ + ++L+DMY KC
Sbjct: 223 MVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKC 282
Query: 285 NRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLK-------------- 330
+ RAF + +D SWN+++ G V+ G + F QM K
Sbjct: 283 KESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYS 342
Query: 331 -------------------AKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDN 371
KVKP +V+ S+I A+ L+ G+ +HG +IRL +
Sbjct: 343 KKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGD 402
Query: 372 KFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLE 431
F++S+L+DMY KCG I+ A +F +D+ WT++I G A HG+ A+ LF +M E
Sbjct: 403 AFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQE 462
Query: 432 DGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLE 491
+GV P V +AVLTACSH+GLV+EG FN M+ F P EHY ++ DLL RAGR+E
Sbjct: 463 EGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVE 522
Query: 492 EAYDFIS-NMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIY 550
EA D + M ++P+ S+W ++L+ACR + +E AE + ++L ++PE G YVL+SNIY
Sbjct: 523 EAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIY 582
Query: 551 SAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDK-SHPYYDKINEALNIL 609
+ RW + K R M ++G+KKT S + +H F+A +K +HP + +I L L
Sbjct: 583 ATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHL 642
Query: 610 LEQMEKEGYVLDTSEV 625
+M+ + LD E+
Sbjct: 643 YNEMKPKLDCLDLLEI 658
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
Query: 298 PYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGK 357
P + +N++I+ V + K ++ G + M++ +V P + +F ++ A + L+ + K
Sbjct: 96 PNPNVFVYNTMISA-VSSSK-NECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEV---K 150
Query: 358 QLHGCIIRLG-FDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMH 416
Q+H II G ++ +SLV Y + GN +A +F ++ D+ ++ +I+G A
Sbjct: 151 QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQ 210
Query: 417 GHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSH 450
G +L+A+ L+ KM+ DG+ P +++L C H
Sbjct: 211 GFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGH 244
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 179/605 (29%), Positives = 304/605 (50%), Gaps = 36/605 (5%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
MR+LG+ P + ++L + G + NAL++MY K
Sbjct: 316 MRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMK--- 372
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
C +VF M + +VVSW T+I G +G ++
Sbjct: 373 --------------------CSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCF 412
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMY 281
++ EM +++P+ TLS +L ++ V + +EIH Y +R DG++ +G+SL+D Y
Sbjct: 413 GLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAY 472
Query: 282 AKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFS 341
A +V+++ + RD I++ S++ + GK + + M ++ Q+S
Sbjct: 473 ASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLP 532
Query: 342 SVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR 401
I A A+L AL GK LH ++ GF + +SLVDMY+KCG+++ A+ +F++I T
Sbjct: 533 GFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATP 592
Query: 402 DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYF 461
D+V+W ++ G A +G A+S FE+M P V F+ +L+ACS+ L D G +YF
Sbjct: 593 DVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYF 652
Query: 462 NSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKS 521
M+K + I P +EHY + +LGRAGRLEEA + M ++P ++ TLL ACR +
Sbjct: 653 QVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGN 712
Query: 522 VELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIE 581
+ L E + +K L + P + Y+L++++Y + + + A K R M K L K S +E
Sbjct: 713 LSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVE 772
Query: 582 IGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYK-RDLLRT 640
+ KVH+F++ D + DK N + +E +++E + Y+ +
Sbjct: 773 VQGKVHSFVSEDVTR--VDKTN-GIYAEIESIKEE---------IKRFGSPYRGNENASF 820
Query: 641 HSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMN 700
HS + A+ + V+KN +C DCH + ++++V ++I VRD ++ H F N
Sbjct: 821 HSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKN 880
Query: 701 GSCSC 705
G CSC
Sbjct: 881 GECSC 885
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 163/334 (48%), Gaps = 2/334 (0%)
Query: 190 RKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEH 249
RK+FD M R V +W +I+ ++ F AL + EM P+ FT SS++ A
Sbjct: 78 RKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGL 137
Query: 250 VDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSII 309
D+ G +HG I+ GF+G+ +GSSL D+Y+KC + + + F L D ISW +I
Sbjct: 138 RDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMI 197
Query: 310 AGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFD 369
+ V K+ + + F+ +M+KA V P + +F ++ A + L L GK +H II G
Sbjct: 198 SSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIP 256
Query: 370 DNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM 429
N + +SLVD Y++ ++ A + + +D+ WT+++ G + A +AV F +M
Sbjct: 257 LNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEM 316
Query: 430 LEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGR 489
G++P + A+L+ CS +D G K +S + A+ D+ +
Sbjct: 317 RSLGLQPNNFTYSAILSLCSAVRSLDFG-KQIHSQTIKVGFEDSTDVGNALVDMYMKCSA 375
Query: 490 LEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVE 523
E + + P W+TL+ H V+
Sbjct: 376 SEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQ 409
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 183/368 (49%), Gaps = 14/368 (3%)
Query: 187 DSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIF 246
D+VR V + +DV W +V++G +N +EA+ EM L+P++FT S+IL +
Sbjct: 277 DAVR-VLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLC 335
Query: 247 AEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVE-HSLRAFYLLPYRDAISW 305
+ + G +IH I+ GF+ +G++L+DMY KC+ E + R F + + +SW
Sbjct: 336 SAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSW 395
Query: 306 NSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIR 365
++I G V +G G +M+K +V+P V+ S V+ AC+ L + ++H ++R
Sbjct: 396 TTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLR 455
Query: 366 LGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSL 425
D + +SLVD YA + A + ++ RD + +T+++ G A+S+
Sbjct: 456 RHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSV 515
Query: 426 FEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAV----A 481
M DG+R ++ ++A ++ G ++ G K+ + + + G A+V
Sbjct: 516 INYMYGDGIRMDQLSLPGFISASANLGALETG-KHLHC----YSVKSGFSGAASVLNSLV 570
Query: 482 DLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILL--VDPEN 539
D+ + G LE+A + P W+ L++ ++ + A +++ + +P++
Sbjct: 571 DMYSKCGSLEDAKKVFEEIA-TPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDS 629
Query: 540 MGAYVLMS 547
+ +L+S
Sbjct: 630 VTFLILLS 637
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 158/317 (49%), Gaps = 32/317 (10%)
Query: 255 GMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQ 314
G+ IH I+ G ++ + ++L+ +Y K + + ++ + F + +R +W +I+ +
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 315 NGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFI 374
+ +F + F +M+ + P + +FSSV+ +CA L ++ G ++HG +I+ GF+ N +
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVV 161
Query: 375 ASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGV 434
SSL D+Y+KCG K A +F ++ D ++WT +I +A+ + +M++ GV
Sbjct: 162 GSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGV 221
Query: 435 RPCYVAFMAVLTACS----------HAGLVDEG--------------WKYFNSMEKDFRI 470
P F+ +L A S H+ ++ G + F+ ME R+
Sbjct: 222 PPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRV 281
Query: 471 --APGLEH---YAAVADLLGRAGRLEEA---YDFISNMGIQPTGSVWSTLLAACRAHKSV 522
+ G + + +V R R +EA + + ++G+QP +S +L+ C A +S+
Sbjct: 282 LNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSL 341
Query: 523 ELAEKVVDKILLVDPEN 539
+ +++ + + V E+
Sbjct: 342 DFGKQIHSQTIKVGFED 358
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 82/165 (49%), Gaps = 10/165 (6%)
Query: 355 LGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCA 414
+G +H +I+ G +N + ++L+ +Y K I AR +FD++ R + AWT +I
Sbjct: 41 IGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFT 100
Query: 415 MHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGL 474
A+SLFE+M+ G P F +V+ +C+ + G + S+ I G
Sbjct: 101 KSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSV-----IKTGF 155
Query: 475 EHYAAV----ADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAA 515
E + V +DL + G+ +EA + S++ T S W+ ++++
Sbjct: 156 EGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTIS-WTMMISS 199
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 161/467 (34%), Positives = 254/467 (54%), Gaps = 31/467 (6%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP 244
++++ RKVFD P RD+VSWN +I G + G +A+ + + M + +KPD T+ ++
Sbjct: 206 DMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVS 265
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR---- 300
+ D+ +G E + Y +G + + ++L+DM++KC + + R F L R
Sbjct: 266 SCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVS 325
Query: 301 ---------------------------DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKV 333
D + WN++I G VQ + + F++M +
Sbjct: 326 WTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNT 385
Query: 334 KPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARY 393
KP +++ + AC+ L AL++G +H I + N + +SLVDMYAKCGNI A
Sbjct: 386 KPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALS 445
Query: 394 IFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGL 453
+F I+TR+ + +TAII G A+HG A A+S F +M++ G+ P + F+ +L+AC H G+
Sbjct: 446 VFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGM 505
Query: 454 VDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLL 513
+ G YF+ M+ F + P L+HY+ + DLLGRAG LEEA + +M ++ +VW LL
Sbjct: 506 IQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALL 565
Query: 514 AACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKK 573
CR H +VEL EK K+L +DP + G YVL+ +Y A W+DA + R M +G++K
Sbjct: 566 FGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEK 625
Query: 574 TPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVL 620
P CS IE+ V F+ DKS P +KI + L+ L M VL
Sbjct: 626 IPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMRSSLSVL 672
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 167/363 (46%), Gaps = 43/363 (11%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREM---GDDKLKPDSFTLSSI 242
+D K+ + ++ SWN I G +++ +E+ + ++M G + +PD FT +
Sbjct: 103 LDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL 162
Query: 243 LPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDA 302
+ A+ G I G+ ++ + + ++ I M+A C +E++ + F P RD
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDL 222
Query: 303 ISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGC 362
+SWN +I G + G+ ++ I ++ M VKP V+ ++ +C+ L LN GK+ +
Sbjct: 223 VSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEY 282
Query: 363 IIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHG----- 417
+ G + ++L+DM++KCG+I AR IFD +E R +V+WT +I G A G
Sbjct: 283 VKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVS 342
Query: 418 --------------------------HALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHA 451
DA++LF++M +P + + L+ACS
Sbjct: 343 RKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQL 402
Query: 452 GLVDEG-W--KYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSV 508
G +D G W +Y +A G ++ D+ + G + EA GIQ S+
Sbjct: 403 GALDVGIWIHRYIEKYSLSLNVALG----TSLVDMYAKCGNISEALSVFH--GIQTRNSL 456
Query: 509 WST 511
T
Sbjct: 457 TYT 459
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 192/414 (46%), Gaps = 32/414 (7%)
Query: 236 SFTLSSILPIFAEHVDVVKGM-EIHGYAIRHGFDGDVFIGSSLIDMYA--KCNRVEHSLR 292
SF L + L E ++ + +I I +G D F S LI A + +++S++
Sbjct: 49 SFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVK 108
Query: 293 AFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLK---AKVKPMQVSFSSVIPACAH 349
+ + SWN I G ++ + ++QML+ + +P ++ + CA
Sbjct: 109 ILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCAD 168
Query: 350 LTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAI 409
L +LG + G +++L + + ++ + M+A CG+++ AR +FD+ RD+V+W +
Sbjct: 169 LRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCL 228
Query: 410 IMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSM-EKDF 468
I G G A A+ +++ M +GV+P V + ++++CS G ++ G +++ + E
Sbjct: 229 INGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGL 288
Query: 469 RIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKV 528
R+ L + A+ D+ + G + EA N+ + S W+T+++ ++++ K+
Sbjct: 289 RMTIPLVN--ALMDMFSKCGDIHEARRIFDNLEKRTIVS-WTTMISGYARCGLLDVSRKL 345
Query: 529 VDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKK--------TPACSWI 580
D + + +++ + M AKR +DA L M++ K ACS
Sbjct: 346 FDDM---EEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACS-- 400
Query: 581 EIGNKVHTFLAGDKSHPYYDKINEALNI-----LLEQMEKEGYVLDTSEVLHDV 629
++ G H Y +K + +LN+ L++ K G + + V H +
Sbjct: 401 ----QLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGI 450
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 303 bits (776), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 167/490 (34%), Positives = 268/490 (54%), Gaps = 35/490 (7%)
Query: 163 GGFGSANKVFDENPQRGKGCKCE-IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
GGF S VF N KC+ I+S RKVFD M RDVVSWN++I+G +Q+G F +
Sbjct: 161 GGFDS--DVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCK 218
Query: 222 DMVREM-GDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDM 280
M + M KP+ T+ S+ + D++ G+E+H I + D+ + +++I
Sbjct: 219 KMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGF 278
Query: 281 YAKCNRVEHSLRAFYLLPYRDAIS-------------------------------WNSII 309
YAKC ++++ F + +D+++ WN++I
Sbjct: 279 YAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMI 338
Query: 310 AGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFD 369
+G +QN ++ I FR+M++ +P V+ SS++P+ + + L GK++H IR G D
Sbjct: 339 SGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGAD 398
Query: 370 DNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM 429
+N ++ +S++D YAK G + A+ +FD + R ++AWTAII A+HG + A SLF++M
Sbjct: 399 NNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQM 458
Query: 430 LEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGR 489
G +P V AVL+A +H+G D F+SM + I PG+EHYA + +L RAG+
Sbjct: 459 QCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGK 518
Query: 490 LEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNI 549
L +A +FIS M I P VW LL +E+A D++ ++PEN G Y +M+N+
Sbjct: 519 LSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANL 578
Query: 550 YSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNIL 609
Y+ A RW++A +R M+ GLKK P SWIE + +F+A D S ++ E + L
Sbjct: 579 YTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGL 638
Query: 610 LEQMEKEGYV 619
+E M + Y+
Sbjct: 639 VESMSDKEYI 648
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 134/253 (52%), Gaps = 10/253 (3%)
Query: 192 VFDLMPARDVVSWNTVIAGNAQNGMFREALDMVRE------MGDDKLKPDSFTLSSILPI 245
VFD + R+ S+N ++ M+ +A + D +PDS ++S +L
Sbjct: 79 VFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKA 138
Query: 246 FAEHVDVVKGM---EIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDA 302
+ D G ++HG+ IR GFD DVF+G+ +I Y KC+ +E + + F + RD
Sbjct: 139 LSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDV 198
Query: 303 ISWNSIIAGCVQNGKFDQGIGFFRQMLK-AKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
+SWNS+I+G Q+G F+ ++ ML + KP V+ SV AC + L G ++H
Sbjct: 199 VSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHK 258
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALD 421
+I + + ++++ YAKCG++ AR +FD++ +D V + AII G HG +
Sbjct: 259 KMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKE 318
Query: 422 AVSLFEKMLEDGV 434
A++LF +M G+
Sbjct: 319 AMALFSEMESIGL 331
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 303 bits (775), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 188/583 (32%), Positives = 293/583 (50%), Gaps = 56/583 (9%)
Query: 101 AMRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQ 160
MR G++ + P +L+A GL +L+ N L+ +Y K
Sbjct: 148 GMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKA- 206
Query: 161 NLGGFGSANKVFDENPQRG--------KGCKCEID--SVRKVFDLMPAR----DVVSWNT 206
G G A +F E P R KG E D S K+F+ M D V+W +
Sbjct: 207 --GRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTS 264
Query: 207 VIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHG 266
V++ ++Q G F + L M L+ + AE + ++HGY I+ G
Sbjct: 265 VLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGG 324
Query: 267 FDGDVFIGSSLIDMYAKCNRV---EHSLRAF----------YLLPYRDA----------- 302
F+ + ++LI +Y K +V EH R + + DA
Sbjct: 325 FEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFS 384
Query: 303 ---------------ISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPAC 347
++W S+I GC G+ D + +FRQM +KV V+ ++ C
Sbjct: 385 ELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSIC 444
Query: 348 AHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWT 407
A L ALNLG+++HG +IR +N + ++LV+MYAKCG + +F+ I +D+++W
Sbjct: 445 AELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWN 504
Query: 408 AIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKD 467
+II G MHG A A+S+F++M+ G P +A +AVL+ACSHAGLV++G + F SM K
Sbjct: 505 SIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKR 564
Query: 468 FRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEK 527
F + P EHYA + DLLGR G L+EA + + NM ++P V LL +CR HK+V++AE
Sbjct: 565 FGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEG 624
Query: 528 VVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVH 587
+ ++ +++PE G+Y+L+SNIYSA RW+++A +R + K LKK SWIE+ K +
Sbjct: 625 IASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKY 684
Query: 588 TFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVD 630
F +G ++ I L L+ M K+G D + D+D
Sbjct: 685 KFSSGSIVQSEFETIYPVLEDLVSHMLKKGPTHDGNNYEDDLD 727
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 144/318 (45%), Gaps = 42/318 (13%)
Query: 190 RKVFD---LMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIF 246
R VF+ L+ D+ WN+++ N +G++ AL++ R M L D + L IL
Sbjct: 109 RNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRAC 168
Query: 247 AEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWN 306
H I+ G ++ + + L+ +Y K R+ + F +P R+ +SWN
Sbjct: 169 RYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWN 228
Query: 307 SIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVI---------------------- 344
+I G Q + + F M + + KP +V+++SV+
Sbjct: 229 VMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMS 288
Query: 345 -------------PACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMA 391
CA L AL++ +++HG +I+ GF++ ++L+ +Y K G +K A
Sbjct: 289 GNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDA 348
Query: 392 RYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLED----GVRPCYVAFMAVLTA 447
++F +I + + +W ++I G +A+SLF ++ E V+ V + +V+
Sbjct: 349 EHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKG 408
Query: 448 CSHAGLVDEGWKYFNSME 465
C+ G D+ +YF M+
Sbjct: 409 CNVQGRGDDSLEYFRQMQ 426
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 129/304 (42%), Gaps = 37/304 (12%)
Query: 273 IGSSLIDMYAKCNRVEHSLRAF---YLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQML 329
+ ++LI +YA+ + + F L+ D WNSI+ V +G ++ + +R M
Sbjct: 91 LAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMR 150
Query: 330 KAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIK 389
+ + ++ AC +L L + H +I++G +N + + L+ +Y K G +
Sbjct: 151 QRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMG 210
Query: 390 MARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACS 449
A +F ++ R+ ++W +I G + AV +FE M + +P V + +VL+ S
Sbjct: 211 DAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHS 270
Query: 450 HAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVW 509
G ++ KYF+ M G +G
Sbjct: 271 QCGKFEDVLKYFHLMRMS---------------------------------GNAVSGEAL 297
Query: 510 STLLAACRAHKSVELAEKVVDKILLVD-PENMGAYVLMSNIYSAAKRWKDAAKLRIHMRS 568
+ + C +++ +AEKV ++ E + + + ++Y + KDA L +R+
Sbjct: 298 AVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRN 357
Query: 569 KGLK 572
KG++
Sbjct: 358 KGIE 361
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 302 bits (774), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 175/530 (33%), Positives = 286/530 (53%), Gaps = 6/530 (1%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
+DS ++F + ++ +++N ++AG +NG +AL + +M ++ F+L+S +
Sbjct: 367 VDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDA 426
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR--DAI 303
+ +IHG+ I+ G + I ++L+DM +C R+ + F P +
Sbjct: 427 CGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSK 486
Query: 304 SWNSIIAGCVQNGKFDQGIGFF-RQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGC 362
+ SII G +NG D+ + F R + + K+ +VS + ++ C L +G Q+H
Sbjct: 487 ATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCY 546
Query: 363 IIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDA 422
++ G+ + + +SL+ MYAKC + A IF+ + D+++W ++I + + +A
Sbjct: 547 ALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEA 606
Query: 423 VSLFEKMLEDGVRPCYVAFMAVLTAC--SHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAV 480
++L+ +M E ++P + V++A + + + F SM+ + I P EHY A
Sbjct: 607 LALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAF 666
Query: 481 ADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENM 540
+LG G LEEA D I++M +QP SV LL +CR H + +A++V IL PE
Sbjct: 667 VRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETP 726
Query: 541 GAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYD 600
Y+L SNIYSA+ W + +R MR +G +K PA SWI NK+H+F A D SHP
Sbjct: 727 SEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEK 786
Query: 601 KINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAF-XXXXXXXXXX 659
I L IL+ + K GY +T VL +VD+ K+ L HS +LA+ +
Sbjct: 787 DIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKP 846
Query: 660 XRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
RV+KN+ +C DCH K+IS +V REIV+RD+S FHHF+NG CSC D W
Sbjct: 847 VRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 174/394 (44%), Gaps = 58/394 (14%)
Query: 102 MRALG-ISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQ 160
MR G + P + F ++L A G ++ +N+LM++Y K
Sbjct: 171 MRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDK-- 228
Query: 161 NLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREA 220
G C D V K+FD +P RDV SWNTV++ + G +A
Sbjct: 229 ----------------DSGSSC----DDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKA 268
Query: 221 LDMVREMGD-DKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLID 279
D+ EM + DSFTLS++L + +++G E+HG AIR G ++ + ++LI
Sbjct: 269 FDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIG 328
Query: 280 MYAK-------------------------------CNRVEHSLRAFYLLPYRDAISWNSI 308
Y+K V+ ++ F + ++ I++N++
Sbjct: 329 FYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNAL 388
Query: 309 IAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGF 368
+AG +NG + + F ML+ V+ S +S + AC ++ + +Q+HG I+ G
Sbjct: 389 MAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGT 448
Query: 369 DDNKFIASSLVDMYAKCGNIKMARYIFDKIETR--DMVAWTAIIMGCAMHGHALDAVSLF 426
N I ++L+DM +C + A +FD+ + A T+II G A +G AVSLF
Sbjct: 449 AFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLF 508
Query: 427 EKML-EDGVRPCYVAFMAVLTACSHAGLVDEGWK 459
+ L E + V+ +L C G + G++
Sbjct: 509 HRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQ 542
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 98/192 (51%), Gaps = 10/192 (5%)
Query: 273 IGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQ-NGKFDQGIGFFRQMLKA 331
+G++LI Y K ++ F L +S+ ++I+G + N + + FFR
Sbjct: 116 LGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAG 175
Query: 332 KVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAK-----CG 386
V+P + +F +++ AC ++ +LG Q+HG I++ GF ++ F+++SL+ +Y K C
Sbjct: 176 LVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCD 235
Query: 387 NIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLE-DGVRPCYVAFMAVL 445
++ +FD+I RD+ +W ++ G + A LF +M +G +L
Sbjct: 236 DVLK---LFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLL 292
Query: 446 TACSHAGLVDEG 457
++C+ + ++ G
Sbjct: 293 SSCTDSSVLLRG 304
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 301 bits (771), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 164/480 (34%), Positives = 263/480 (54%), Gaps = 29/480 (6%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
GL+ D++ ++L+ MY K +G RK+FD + RD
Sbjct: 162 GLERDVHINHSLIMMYAKCGQVG------------------------YARKLFDEITERD 197
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
VSWN++I+G ++ G ++A+D+ R+M ++ +PD TL S+L + D+ G +
Sbjct: 198 TVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEE 257
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQ 320
AI F+GS LI MY KC ++ + R F + +D ++W ++I QNGK +
Sbjct: 258 MAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSE 317
Query: 321 GIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVD 380
F +M K V P + S+V+ AC + AL LGKQ+ L N ++A+ LVD
Sbjct: 318 AFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVD 377
Query: 381 MYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVA 440
MY KCG ++ A +F+ + ++ W A+I A GHA +A+ LF++M V P +
Sbjct: 378 MYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDIT 434
Query: 441 FMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM 500
F+ VL+AC HAGLV +G +YF+ M F + P +EHY + DLL RAG L+EA++F+
Sbjct: 435 FIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERF 494
Query: 501 GIQPTGSVWSTLLAACRAHKSVELAEKVVDKIL-LVDPENMGAYVLMSNIYSAAKRWKDA 559
+P + + +L AC K V + EK + ++ + + +N G YV+ SN+ + K W ++
Sbjct: 495 PGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDES 554
Query: 560 AKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAG-DKSHPYYDKINEALNILLEQMEKEGY 618
AK+R MR +G+ KTP CSWIEI ++ FLAG D + ++L+E+M++E Y
Sbjct: 555 AKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSLFDLLVEEMKRERY 614
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 166/326 (50%), Gaps = 5/326 (1%)
Query: 192 VFDLMPARDVVSWNTVIAG--NAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEH 249
+F + + S+N +I G N N AL + R M LKPD FT + + A+
Sbjct: 87 LFSVTEEPNHYSFNYMIRGLTNTWND-HEAALSLYRRMKFSGLKPDKFTYNFVFIACAKL 145
Query: 250 VDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSII 309
++ G +H + G + DV I SLI MYAKC +V ++ + F + RD +SWNS+I
Sbjct: 146 EEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMI 205
Query: 310 AGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFD 369
+G + G + FR+M + +P + + S++ AC+HL L G+ L I
Sbjct: 206 SGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIG 265
Query: 370 DNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM 429
+ F+ S L+ MY KCG++ AR +F+++ +D VAWTA+I + +G + +A LF +M
Sbjct: 266 LSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM 325
Query: 430 LEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGR 489
+ GV P VL+AC G ++ G K + + + + + D+ G+ GR
Sbjct: 326 EKTGVSPDAGTLSTVLSACGSVGALELG-KQIETHASELSLQHNIYVATGLVDMYGKCGR 384
Query: 490 LEEAYDFISNMGIQPTGSVWSTLLAA 515
+EEA M ++ + W+ ++ A
Sbjct: 385 VEEALRVFEAMPVK-NEATWNAMITA 409
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 301 bits (770), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 156/433 (36%), Positives = 255/433 (58%), Gaps = 4/433 (0%)
Query: 186 IDSVRKVFD-LMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP 244
+ ++VFD L ++D++SWN++IAG +++ + A ++ +M ++ D +T + +L
Sbjct: 254 VSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLS 313
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAK--CNRVEHSLRAFYLLPYRDA 302
+ + G +HG I+ G + ++LI MY + +E +L F L +D
Sbjct: 314 ACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDL 373
Query: 303 ISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGC 362
ISWNSII G Q G + + FF + +++K +FS+++ +C+ L L LG+Q+H
Sbjct: 374 ISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHAL 433
Query: 363 IIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR-DMVAWTAIIMGCAMHGHALD 421
+ GF N+F+ SSL+ MY+KCG I+ AR F +I ++ VAW A+I+G A HG
Sbjct: 434 ATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQV 493
Query: 422 AVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVA 481
++ LF +M V+ +V F A+LTACSH GL+ EG + N ME ++I P +EHYAA
Sbjct: 494 SLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAV 553
Query: 482 DLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMG 541
DLLGRAG + +A + I +M + P V T L CRA +E+A +V + +L ++PE+
Sbjct: 554 DLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHF 613
Query: 542 AYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDK 601
YV +S++YS K+W++ A ++ M+ +G+KK P SWIEI N+V F A D+S+P
Sbjct: 614 TYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQD 673
Query: 602 INEALNILLEQME 614
I + L ++M+
Sbjct: 674 IYMMIKDLTQEMQ 686
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 162/342 (47%), Gaps = 31/342 (9%)
Query: 145 DLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSW 204
D+Y +N +++ Y K G G AN +FDE MP RD VSW
Sbjct: 34 DIYVSNRILDSYIK---FGFLGYANMLFDE---------------------MPKRDSVSW 69
Query: 205 NTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIR 264
NT+I+G G +A + M D ++ S +L A G ++HG I+
Sbjct: 70 NTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIK 129
Query: 265 HGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGF 324
G++ +V++GSSL+DMYAKC RVE + AF + +++SWN++IAG VQ
Sbjct: 130 GGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWL 189
Query: 325 FRQM-LKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYA 383
M +KA V +F+ ++ NL KQ+H +++LG I ++++ YA
Sbjct: 190 LGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYA 249
Query: 384 KCGNIKMARYIFDKI-ETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFM 442
CG++ A+ +FD + ++D+++W ++I G + H A LF +M V +
Sbjct: 250 DCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYT 309
Query: 443 AVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLL 484
+L+ACS E + F I GLE + + L
Sbjct: 310 GLLSACS-----GEEHQIFGKSLHGMVIKKGLEQVTSATNAL 346
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 89/154 (57%)
Query: 259 HGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKF 318
H YAI+ G D+++ + ++D Y K + ++ F +P RD++SWN++I+G GK
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 319 DQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSL 378
+ F M ++ SFS ++ A + +LG+Q+HG +I+ G++ N ++ SSL
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 379 VDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMG 412
VDMYAKC ++ A F +I + V+W A+I G
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAG 176
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 157/445 (35%), Positives = 253/445 (56%), Gaps = 1/445 (0%)
Query: 182 CKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
C C + S R VFD M R+V++ VI+G +N + + L + M + P+S T S
Sbjct: 203 CGCSV-SGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLS 261
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
L + +V+G +IH ++G + ++ I S+L+DMY+KC +E + F D
Sbjct: 262 ALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVD 321
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
+S I+ G QNG ++ I FF +ML+A V+ S+V+ +L LGKQLH
Sbjct: 322 EVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHS 381
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALD 421
+I+ F N F+ + L++MY+KCG++ ++ +F ++ R+ V+W ++I A HGH L
Sbjct: 382 LVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLA 441
Query: 422 AVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVA 481
A+ L+E+M V+P V F+++L ACSH GL+D+G + N M++ I P EHY +
Sbjct: 442 ALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCII 501
Query: 482 DLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMG 541
D+LGRAG L+EA FI ++ ++P +W LL AC H E+ E +++ P++
Sbjct: 502 DMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSS 561
Query: 542 AYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDK 601
A++L++NIYS+ +WK+ AK M++ G+ K S IEI +K H+F+ DK HP +
Sbjct: 562 AHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEA 621
Query: 602 INEALNILLEQMEKEGYVLDTSEVL 626
I + L+ L M EGY D +L
Sbjct: 622 IYDVLSGLFPVMVDEGYRPDKRFIL 646
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 132/255 (51%), Gaps = 4/255 (1%)
Query: 182 CKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREM-GDDKLKPDSFTLS 240
C +D++ K+FD MP RDV+S N V G +N +++ M G D TL+
Sbjct: 103 CGKLVDAI-KLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGF--DHATLT 159
Query: 241 SILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR 300
+L + + IH AI G+D ++ +G+ LI Y KC F + +R
Sbjct: 160 IVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHR 219
Query: 301 DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLH 360
+ I+ ++I+G ++N + G+ F M + V P V++ S + AC+ + G+Q+H
Sbjct: 220 NVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIH 279
Query: 361 GCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHAL 420
+ + G + I S+L+DMY+KCG+I+ A IF+ D V+ T I++G A +G
Sbjct: 280 ALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEE 339
Query: 421 DAVSLFEKMLEDGVR 435
+A+ F +ML+ GV
Sbjct: 340 EAIQFFIRMLQAGVE 354
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 134/279 (48%), Gaps = 26/279 (9%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G++ +L +ALM+MY K + I+ +F+ D
Sbjct: 286 GIESELCIESALMDMYSKCGS------------------------IEDAWTIFESTTEVD 321
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
VS ++ G AQNG EA+ M ++ D+ +S++L + + G ++H
Sbjct: 322 EVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHS 381
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQ 320
I+ F G+ F+ + LI+MY+KC + S F +P R+ +SWNS+IA ++G
Sbjct: 382 LVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLA 441
Query: 321 GIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRL-GFDDNKFIASSLV 379
+ + +M +VKP V+F S++ AC+H+ ++ G++L + + G + + ++
Sbjct: 442 ALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCII 501
Query: 380 DMYAKCGNIKMARYIFDKIETR-DMVAWTAIIMGCAMHG 417
DM + G +K A+ D + + D W A++ C+ HG
Sbjct: 502 DMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHG 540
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 120/258 (46%), Gaps = 28/258 (10%)
Query: 244 PIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAI 303
P F E VD +IH A+ + +SL+ +YAKC ++ +++ F +P RD I
Sbjct: 75 PEFFEPVDA----DIHRNAL--------VVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVI 122
Query: 304 SWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCI 363
S N + G ++N + + G ++ML + + + V+ C + K +H
Sbjct: 123 SQNIVFYGFLRNRETESGFVLLKRMLGSGGFD-HATLTIVLSVCDTPEFCLVTKMIHALA 181
Query: 364 IRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAV 423
I G+D + + L+ Y KCG R +FD + R+++ TA+I G + D +
Sbjct: 182 ILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGL 241
Query: 424 SLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG-------WKYFNSMEKDFRIAPGLEH 476
LF M V P V +++ L ACS + + EG WKY +E + I
Sbjct: 242 RLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKY--GIESELCIE----- 294
Query: 477 YAAVADLLGRAGRLEEAY 494
+A+ D+ + G +E+A+
Sbjct: 295 -SALMDMYSKCGSIEDAW 311
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 299 bits (766), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 176/521 (33%), Positives = 275/521 (52%), Gaps = 28/521 (5%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M GI S LKA T GLD DL+T ++L++MY K
Sbjct: 520 MNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSK--- 576
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
C I RKVF +P VVS N +IAG +QN + EA+
Sbjct: 577 --------------------CGI-IKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAV 614
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGD-VFIGSSLIDM 280
+ +EM + P T ++I+ + + G + HG + GF + ++G SL+ M
Sbjct: 615 VLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGM 674
Query: 281 YAKCNRVEHSLRAFYLLPYRDAIS-WNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVS 339
Y + + F L +I W +++G QNG +++ + F+++M V P Q +
Sbjct: 675 YMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQAT 734
Query: 340 FSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIE 399
F +V+ C+ L++L G+ +H I L D ++ +++L+DMYAKCG++K + +FD++
Sbjct: 735 FVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMR 794
Query: 400 TR-DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGW 458
R ++V+W ++I G A +G+A DA+ +F+ M + + P + F+ VLTACSHAG V +G
Sbjct: 795 RRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGR 854
Query: 459 KYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRA 518
K F M + I ++H A + DLLGR G L+EA DFI ++P +WS+LL ACR
Sbjct: 855 KIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRI 914
Query: 519 HKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACS 578
H E +K++ ++P+N AYVL+SNIY++ W+ A LR MR +G+KK P S
Sbjct: 915 HGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYS 974
Query: 579 WIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYV 619
WI++ + H F AGDKSH KI L L + M+ + V
Sbjct: 975 WIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKDDAVV 1015
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 191/392 (48%), Gaps = 32/392 (8%)
Query: 145 DLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSW 204
+L+ NAL++MY K L + R++F+ M RD V+W
Sbjct: 462 NLFVGNALVDMYAKCGAL------------------------EDARQIFERMCDRDNVTW 497
Query: 205 NTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIR 264
NT+I Q+ EA D+ + M + D L+S L + +G ++H +++
Sbjct: 498 NTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVK 557
Query: 265 HGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGF 324
G D D+ GSSLIDMY+KC ++ + + F LP +S N++IAG QN ++ +
Sbjct: 558 CGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVL 616
Query: 325 FRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGF-DDNKFIASSLVDMYA 383
F++ML V P +++F++++ AC +L LG Q HG I + GF + +++ SL+ MY
Sbjct: 617 FQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYM 676
Query: 384 KCGNIKMARYIFDKIET-RDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFM 442
+ A +F ++ + + +V WT ++ G + +G +A+ +++M DGV P F+
Sbjct: 677 NSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFV 736
Query: 443 AVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAA--VADLLGRAGRLEEAYDFISNM 500
VL CS + EG + + F +A L+ + + D+ + G ++ + M
Sbjct: 737 TVLRVCSVLSSLREGRAIHSLI---FHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEM 793
Query: 501 GIQPTGSVWSTLLAACRAHKSVELAEKVVDKI 532
+ W++L+ + E A K+ D +
Sbjct: 794 RRRSNVVSWNSLINGYAKNGYAEDALKIFDSM 825
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 196/427 (45%), Gaps = 49/427 (11%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP 244
++ R +F M + DVV+WN +I+G+ + G A++ M +K TL S+L
Sbjct: 276 KLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLS 335
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS 304
++ G+ +H AI+ G ++++GSSL+ MY+KC ++E + + F L ++ +
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF 395
Query: 305 WNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCII 364
WN++I G NG+ + + F M + +F+S++ CA L +G Q H II
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455
Query: 365 RLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVS 424
+ N F+ ++LVDMYAKCG ++ AR IF+++ RD V W II + +A
Sbjct: 456 KKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFD 515
Query: 425 LFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLL 484
LF++M G+ + L AC+H + +G K + + + L +++ D+
Sbjct: 516 LFKRMNLCGIVSDGACLASTLKACTHVHGLYQG-KQVHCLSVKCGLDRDLHTGSSLIDMY 574
Query: 485 GRAG------------------------------RLEEAYDFISNM---GIQPTGSVWST 511
+ G LEEA M G+ P+ ++T
Sbjct: 575 SKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFAT 634
Query: 512 LLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGL 571
++ AC +S+ L + +I + G Y+ +S L ++M S+G+
Sbjct: 635 IVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGIS-------------LLGMYMNSRGM 681
Query: 572 KKTPACS 578
T AC+
Sbjct: 682 --TEACA 686
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 161/312 (51%), Gaps = 10/312 (3%)
Query: 255 GMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQ 314
G +H ++ G D + +G++++D+YAKC +V ++ + F L +D +WNS+++
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSS 137
Query: 315 NGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFI 374
GK + + F + + ++ P + +FS V+ CA T + G+Q+H +I++G + N +
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYC 197
Query: 375 ASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGV 434
+LVDMYAKC I AR +F+ I + V WT + G G +AV +FE+M ++G
Sbjct: 198 GGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH 257
Query: 435 RPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAY 494
RP ++AF+ V+ G + + F M +P + + + G+ G A
Sbjct: 258 RPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKRGCETVAI 312
Query: 495 DFISNM---GIQPTGSVWSTLLAACRAHKSVELAEKV-VDKILLVDPENMGAYVLMSNIY 550
++ NM ++ T S ++L+A +++L V + I L N+ + ++Y
Sbjct: 313 EYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMY 372
Query: 551 SAAKRWKDAAKL 562
S ++ + AAK+
Sbjct: 373 SKCEKMEAAAKV 384
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 160/375 (42%), Gaps = 61/375 (16%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
GL+ + Y AL++MY K I R+VF+ + +
Sbjct: 190 GLERNSYCGGALVDMYAKCD------------------------RISDARRVFEWIVDPN 225
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
V W + +G + G+ EA+ + M D+ +PD ++
Sbjct: 226 TVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV------------------ 267
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQ 320
I+ Y + +++ + F + D ++WN +I+G + G
Sbjct: 268 -----------------INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETV 310
Query: 321 GIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVD 380
I +F M K+ VK + + SV+ A + L+LG +H I+LG N ++ SSLV
Sbjct: 311 AIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370
Query: 381 MYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVA 440
MY+KC ++ A +F+ +E ++ V W A+I G A +G + + LF M G
Sbjct: 371 MYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFT 430
Query: 441 FMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM 500
F ++L+ C+ + ++ G + F+S+ ++A L A+ D+ + G LE+A M
Sbjct: 431 FTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 501 GIQPTGSVWSTLLAA 515
W+T++ +
Sbjct: 490 -CDRDNVTWNTIIGS 503
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 135/322 (41%), Gaps = 68/322 (21%)
Query: 168 ANKVFDENPQR-------GKG------------------------CKC-EIDSVRKVFDL 195
+ KVFDE PQR GK KC ++ K FD
Sbjct: 61 SRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDF 120
Query: 196 MPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKG 255
+ +DV +WN++++ + G + L + ++++ P+ FT S +L A +V G
Sbjct: 121 LE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFG 179
Query: 256 MEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQN 315
+IH I+ G + + + G +L+DMYAKC+R+ + R F + + + W + +G V+
Sbjct: 180 RQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKA 239
Query: 316 GKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIA 375
G ++ + F +M +P ++F +VI
Sbjct: 240 GLPEEAVLVFERMRDEGHRPDHLAFVTVI------------------------------- 268
Query: 376 SSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVR 435
+ Y + G +K AR +F ++ + D+VAW +I G G A+ F M + V+
Sbjct: 269 ----NTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVK 324
Query: 436 PCYVAFMAVLTACSHAGLVDEG 457
+VL+A +D G
Sbjct: 325 STRSTLGSVLSAIGIVANLDLG 346
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 108/228 (47%), Gaps = 24/228 (10%)
Query: 352 ALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIM 411
AL +GK +H + LG D + +++VD+YAKC + A FD +E +D+ AW +++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLS 133
Query: 412 GCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIA 471
+ G + F + E+ + P F VL+ C+ V+ G + SM I
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSM-----IK 188
Query: 472 PGLEHYA----AVADLLGRAGRLEEA---YDFISNMGIQPTGSVWSTLLA----ACRAHK 520
GLE + A+ D+ + R+ +A +++I + P W+ L + A +
Sbjct: 189 MGLERNSYCGGALVDMYAKCDRISDARRVFEWI----VDPNTVCWTCLFSGYVKAGLPEE 244
Query: 521 SVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRS 568
+V + E++ D+ P+++ A+V + N Y + KDA L M S
Sbjct: 245 AVLVFERMRDEGH--RPDHL-AFVTVINTYIRLGKLKDARLLFGEMSS 289
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 298 bits (763), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 174/560 (31%), Positives = 279/560 (49%), Gaps = 56/560 (10%)
Query: 106 GISPTRHFFPSLLKA-STXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGG 164
G++P H FP LL GL +LY NAL+ MY +L G
Sbjct: 129 GVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMY----SLCG 184
Query: 165 FGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMV 224
+D R VFD DV SWN +I+G + + E+++++
Sbjct: 185 L--------------------MDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELL 224
Query: 225 REMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKC 284
EM + + P S TL +L ++ D +H Y + + + ++L++ YA C
Sbjct: 225 VEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAAC 284
Query: 285 NRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGK--------------------------- 317
++ ++R F + RD ISW SI+ G V+ G
Sbjct: 285 GEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYL 344
Query: 318 ----FDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKF 373
F++ + FR+M A + P + + SV+ ACAHL +L +G+ + I + ++
Sbjct: 345 RAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVV 404
Query: 374 IASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDG 433
+ ++L+DMY KCG + A+ +F ++ RD WTA+++G A +G +A+ +F +M +
Sbjct: 405 VGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMS 464
Query: 434 VRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEA 493
++P + ++ VL+AC+H+G+VD+ K+F M D RI P L HY + D+LGRAG ++EA
Sbjct: 465 IQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEA 524
Query: 494 YDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAA 553
Y+ + M + P VW LL A R H +AE KIL ++P+N Y L+ NIY+
Sbjct: 525 YEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGC 584
Query: 554 KRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQM 613
KRWKD ++R + +KKTP S IE+ H F+AGDKSH ++I L L ++
Sbjct: 585 KRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQES 644
Query: 614 EKEGYVLDTSEVLHDVDDEY 633
Y+ DTSE+L + D Y
Sbjct: 645 TFAAYLPDTSELLFEAGDAY 664
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 179/407 (43%), Gaps = 65/407 (15%)
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHV 250
K+F +P DVV WN +I G ++ E + + M + + PDS T +L
Sbjct: 89 KLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDG 148
Query: 251 DVVK-GMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSII 309
+ G ++H + ++ G ++++ ++L+ MY+ C ++ + F D SWN +I
Sbjct: 149 GALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMI 208
Query: 310 AGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFD 369
+G + ++++ I +M + V P V+ V+ AC+ + +L K++H + +
Sbjct: 209 SGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTE 268
Query: 370 DNKFIASSLVDMYAKC-------------------------------GNIKMARYIFDKI 398
+ + ++LV+ YA C GN+K+AR FD++
Sbjct: 269 PSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQM 328
Query: 399 ETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG- 457
RD ++WT +I G G +++ +F +M G+ P ++VLTAC+H G ++ G
Sbjct: 329 PVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGE 388
Query: 458 W--KYF--NSMEKDFRIAPGL-----------------------EHYAAVADLLGRA--G 488
W Y N ++ D + L + + A ++G A G
Sbjct: 389 WIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNG 448
Query: 489 RLEEAYDF---ISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKI 532
+ +EA + +M IQP + +L+AC V+ A K K+
Sbjct: 449 QGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKM 495
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 175/394 (44%), Gaps = 27/394 (6%)
Query: 257 EIHGYAIRHGFDGDVFIGSSLIDMYAKCNR----VEHSLRAFYLLPYRDAISWNSIIAGC 312
++H +I G + L + C+R V ++ + F +P D + WN++I G
Sbjct: 52 QLHSQSITRGVAPNPTFQKKLFVFW--CSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGW 109
Query: 313 VQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAH-LTALNLGKQLHGCIIRLGFDDN 371
+ +G+ + MLK V P +F ++ AL GK+LH +++ G N
Sbjct: 110 SKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSN 169
Query: 372 KFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLE 431
++ ++LV MY+ CG + MAR +FD+ D+ +W +I G +++ L +M
Sbjct: 170 LYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMER 229
Query: 432 DGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLE 491
+ V P V + VL+ACS D K + + + P L A+ + G ++
Sbjct: 230 NLVSPTSVTLLLVLSACSKVKDKDLC-KRVHEYVSECKTEPSLRLENALVNAYAACGEMD 288
Query: 492 EAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYS 551
A +M + S W++++ +++LA D++ + D ++ +M + Y
Sbjct: 289 IAVRIFRSMKARDVIS-WTSIVKGYVERGNLKLARTYFDQMPVRD---RISWTIMIDGYL 344
Query: 552 AAKRWKDAAKLRIHMRSKGL--------KKTPACS---WIEIGNKVHTFLAGDKSHPYYD 600
A + ++ ++ M+S G+ AC+ +EIG + T++ DK+ D
Sbjct: 345 RAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYI--DKNKIKND 402
Query: 601 KINEALNILLEQMEKEGYVLDTSEVLHDVDDEYK 634
+ N L++ K G +V HD+D K
Sbjct: 403 VV--VGNALIDMYFKCGCSEKAQKVFHDMDQRDK 434
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 156/403 (38%), Positives = 244/403 (60%), Gaps = 5/403 (1%)
Query: 183 KCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREM--GDDKLKPDSFTLS 240
KC I + R+VFDL ++ V+W+ +I G +N M +EA ++ +M D+ +
Sbjct: 254 KCIIYA-RRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIG 312
Query: 241 SILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR 300
IL A D+ G +H YA++ GF D+ + +++I YAK + + R F + +
Sbjct: 313 LILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLK 372
Query: 301 DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLH 360
D IS+NS+I GCV N + ++ F +M + ++P + V+ AC+HL AL G H
Sbjct: 373 DVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCH 432
Query: 361 GCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHAL 420
G + G+ N I ++L+DMY KCG + +A+ +FD + RD+V+W ++ G +HG
Sbjct: 433 GYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGK 492
Query: 421 DAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEK-DFRIAPGLEHYAA 479
+A+SLF M E GV P V +A+L+ACSH+GLVDEG + FNSM + DF + P ++HY
Sbjct: 493 EALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNC 552
Query: 480 VADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPEN 539
+ DLL RAG L+EAYDF++ M +P V TLL+AC +K+ EL +V K+ + E
Sbjct: 553 MTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLG-ET 611
Query: 540 MGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEI 582
+ VL+SN YSAA+RW+DAA++R+ + +GL KTP SW+++
Sbjct: 612 TESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 169/357 (47%), Gaps = 31/357 (8%)
Query: 106 GISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGF 165
G+ PT++ +P +LKA D+Y AL++ Y K
Sbjct: 98 GVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCG----- 152
Query: 166 GSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVR 225
E++ KVFD MP RD+V+WN +I+G + + + + +
Sbjct: 153 -------------------ELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFL 193
Query: 226 EMGD-DKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKC 284
+M D L P+ T+ + P + +G +HGY R GF D+ + + ++D+YAK
Sbjct: 194 DMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKS 253
Query: 285 NRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQML----KAKVKPMQVSF 340
+ ++ R F L ++ ++W+++I G V+N + F QML A V P+ +
Sbjct: 254 KCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGL 313
Query: 341 SSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIET 400
++ CA L+ G+ +H ++ GF + + ++++ YAK G++ A F +I
Sbjct: 314 --ILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGL 371
Query: 401 RDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG 457
+D++++ ++I GC ++ ++ LF +M G+RP + VLTACSH + G
Sbjct: 372 KDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHG 428
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 171/351 (48%), Gaps = 15/351 (4%)
Query: 185 EIDSVRKVFDLMPARDV--VSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSI 242
E++ R VFD +P + ++W+ +I A N +ALD+ +M + ++P +T +
Sbjct: 50 EVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFV 109
Query: 243 LPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDA 302
L A + G IH + F D+++ ++L+D YAKC +E +++ F +P RD
Sbjct: 110 LKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDM 169
Query: 303 ISWNSIIAGCVQNGKFDQGIGFFRQMLKAK-VKPMQVSFSSVIPACAHLTALNLGKQLHG 361
++WN++I+G + IG F M + + P + + PA AL GK +HG
Sbjct: 170 VAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHG 229
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALD 421
R+GF ++ + + ++D+YAK I AR +FD ++ V W+A+I G + +
Sbjct: 230 YCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKE 289
Query: 422 AVSLFEKMLEDG----VRPCYVAFMAVLTACSHAGLVDEG-WKYFNSMEKDFRIAPGLEH 476
A +F +ML + V P VA +L C+ G + G + +++ F + +++
Sbjct: 290 AGEVFFQMLVNDNVAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQN 347
Query: 477 YAAVADLLGRAGRLEEAYDFISNMGIQPT---GSVWSTLLAACRAHKSVEL 524
+ + G L +A+ S +G++ S+ + + CR +S L
Sbjct: 348 --TIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRL 396
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 156/332 (46%), Gaps = 16/332 (4%)
Query: 241 SILPIFAEHVDVVKGMEIHGYAIRHGFD-GDVFIGSSLIDMYAKCNRVEHSLRAFYLLPY 299
S+L ++V G IH + ++ + +L +YA CN VE + F +P+
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPH 63
Query: 300 R--DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGK 357
+ I+W+ +I N ++ + + +ML + V+P + ++ V+ ACA L A++ GK
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK 123
Query: 358 QLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHG 417
+H + F + ++ ++LVD YAKCG ++MA +FD++ RDMVAW A+I G ++H
Sbjct: 124 LIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHC 183
Query: 418 HALDAVSLFEKMLE-DGVRPCYVAFMAVLTACSHAGLVDEGWK---YFNSM--EKDFRIA 471
D + LF M DG+ P + + A AG + EG Y M D +
Sbjct: 184 CLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVK 243
Query: 472 PGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDK 531
G+ A + + A R + ++ + WS ++ ++ ++ A +V +
Sbjct: 244 TGILDVYAKSKCIIYARR-------VFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQ 296
Query: 532 ILLVDPENMGAYVLMSNIYSAAKRWKDAAKLR 563
+L+ D M V + I R+ D + R
Sbjct: 297 MLVNDNVAMVTPVAIGLILMGCARFGDLSGGR 328
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/532 (33%), Positives = 267/532 (50%), Gaps = 60/532 (11%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M + GI P +PS+LKA LY NAL++MY + +N
Sbjct: 135 MVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRN 194
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
+G R++FD M RD VSWN VI A GM+ EA
Sbjct: 195 MG------------------------IARRLFDRMFERDAVSWNAVINCYASEGMWSEAF 230
Query: 222 DMVREMGDDKLKPDSFTLSSI----------------------LPIFAEHVDVVKGM--- 256
++ +M ++ T + I P + V ++ G+
Sbjct: 231 ELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKAC 290
Query: 257 ----------EIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWN 306
EIHG AI +DG + ++LI MY+KC + H+L F +WN
Sbjct: 291 SLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWN 350
Query: 307 SIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRL 366
SII+G Q K ++ R+ML A +P ++ +S++P CA + L GK+ H I+R
Sbjct: 351 SIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRR 410
Query: 367 G-FDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSL 425
F D + +SLVD+YAK G I A+ + D + RD V +T++I G G A++L
Sbjct: 411 KCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALAL 470
Query: 426 FEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLG 485
F++M G++P +V +AVL+ACSH+ LV EG + F M+ ++ I P L+H++ + DL G
Sbjct: 471 FKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYG 530
Query: 486 RAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVL 545
RAG L +A D I NM +P+G+ W+TLL AC H + ++ + +K+L + PEN G YVL
Sbjct: 531 RAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVL 590
Query: 546 MSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHP 597
++N+Y+AA W A++R MR G+KK P C+WI+ + F GD S P
Sbjct: 591 IANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSP 642
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 133/294 (45%), Gaps = 35/294 (11%)
Query: 202 VSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGY 261
+ WN +IA A+N +F E + + M ++PD+FT S+L E +DV G +HG
Sbjct: 110 LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGS 169
Query: 262 AIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSII------------ 309
+ +++ ++LI MY + + + R F + RDA+SWN++I
Sbjct: 170 IEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEA 229
Query: 310 -----------------------AGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPA 346
GC+Q G + +G +M V+ + A
Sbjct: 230 FELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKA 289
Query: 347 CAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAW 406
C+ + A+ LGK++HG I +D + ++L+ MY+KC +++ A +F + E + W
Sbjct: 290 CSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTW 349
Query: 407 TAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKY 460
+II G A + +A L +ML G +P + ++L C+ + G ++
Sbjct: 350 NSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEF 403
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 3/221 (1%)
Query: 235 DSFTLSSILPIFAEHVDV---VKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSL 291
D L S + + VDV + G+++H + I G + + L+ Y+ N +
Sbjct: 39 DDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQ 98
Query: 292 RAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLT 351
+ WN +IA +N F++ I +++M+ ++P ++ SV+ AC
Sbjct: 99 SIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETL 158
Query: 352 ALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIM 411
+ G+ +HG I + + ++ ++L+ MY + N+ +AR +FD++ RD V+W A+I
Sbjct: 159 DVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVIN 218
Query: 412 GCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAG 452
A G +A LF+KM GV + + + C G
Sbjct: 219 CYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTG 259
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 162/448 (36%), Positives = 251/448 (56%), Gaps = 33/448 (7%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
GLD D Y A +L+ MY + LG SA KVFDE +P R+
Sbjct: 139 GLDKDDYVAPSLVEMYAQ---LGTMESAQKVFDE---------------------IPVRN 174
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP----IFAEHVDVVKGM 256
V W ++ G + E + M D L D+ TL ++ +FA V G
Sbjct: 175 SVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKV----GK 230
Query: 257 EIHGYAIRHGF-DGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQN 315
+HG +IR F D ++ +S+IDMY KC ++++ + F R+ + W ++I+G +
Sbjct: 231 CVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKC 290
Query: 316 GKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIA 375
+ + FRQML+ + P Q + ++++ +C+ L +L GK +HG +IR G + +
Sbjct: 291 ERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNF 350
Query: 376 SSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVR 435
+S +DMYA+CGNI+MAR +FD + R++++W+++I ++G +A+ F KM V
Sbjct: 351 TSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVV 410
Query: 436 PCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYD 495
P V F+++L+ACSH+G V EGWK F SM +D+ + P EHYA + DLLGRAG + EA
Sbjct: 411 PNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKS 470
Query: 496 FISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKR 555
FI NM ++P S W LL+ACR HK V+LA ++ +K+L ++PE YVL+SNIY+ A
Sbjct: 471 FIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGM 530
Query: 556 WKDAAKLRIHMRSKGLKKTPACSWIEIG 583
W+ +R M KG +K S E+G
Sbjct: 531 WEMVNCVRRKMGIKGYRKHVGQSATEVG 558
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 167/341 (48%), Gaps = 19/341 (5%)
Query: 186 IDSVRKVFDLMPA--RDVVSWNTVIAGNAQNGM--FREALDMVREMGDDKLKPDSFTLSS 241
+D F+ +P R+ SWNT+++G +++ + + L + M DSF L
Sbjct: 55 LDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVF 114
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
+ + G+ IHG A+++G D D ++ SL++MYA+ +E + + F +P R+
Sbjct: 115 AIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRN 174
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
++ W ++ G ++ K + F M + ++ ++ AC ++ A +GK +HG
Sbjct: 175 SVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHG 234
Query: 362 CIIRLGF-DDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHAL 420
IR F D + ++ +S++DMY KC + AR +F+ R++V WT +I G A A+
Sbjct: 235 VSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAV 294
Query: 421 DAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLE----H 476
+A LF +ML + + P A+L +CS G + G M I G+E +
Sbjct: 295 EAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYM-----IRNGIEMDAVN 349
Query: 477 YAAVADLLGRAGRLEEAYDFISNMGIQPTGSV--WSTLLAA 515
+ + D+ R G ++ A M P +V WS+++ A
Sbjct: 350 FTSFIDMYARCGNIQMARTVFDMM---PERNVISWSSMINA 387
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 113/216 (52%), Gaps = 8/216 (3%)
Query: 241 SILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLP-- 298
++L I ++ + ++H I HGF+ +V +GSSL + Y + NR++ + +F +P
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 299 YRDAISWNSIIAGCVQNGK--FDQGIGFFRQMLK--AKVKPMQVSFSSVIPACAHLTALN 354
R+ SWN+I++G ++ + + + +M + V + F+ I AC L L
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFA--IKACVGLGLLE 126
Query: 355 LGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCA 414
G +HG ++ G D + ++A SLV+MYA+ G ++ A+ +FD+I R+ V W ++ G
Sbjct: 127 NGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYL 186
Query: 415 MHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSH 450
+ + LF M + G+ + + ++ AC +
Sbjct: 187 KYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGN 222
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/399 (37%), Positives = 232/399 (58%), Gaps = 1/399 (0%)
Query: 183 KC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
KC ++ K+F +P +D W ++I+G + G REA+ + EM DD PD TL++
Sbjct: 497 KCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAA 556
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
+L + + H + +G EIHGY +R G D + +GS+L++MY+KC ++ + + + LP D
Sbjct: 557 VLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELD 616
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
+S +S+I+G Q+G G FR M+ + + SS++ A A +LG Q+H
Sbjct: 617 PVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHA 676
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALD 421
I ++G + SSL+ MY+K G+I F +I D++AWTA+I A HG A +
Sbjct: 677 YITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANE 736
Query: 422 AVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVA 481
A+ ++ M E G +P V F+ VL+ACSH GLV+E + + NSM KD+ I P HY +
Sbjct: 737 ALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMV 796
Query: 482 DLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMG 541
D LGR+GRL EA FI+NM I+P VW TLLAAC+ H VEL + K + ++P + G
Sbjct: 797 DALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAG 856
Query: 542 AYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWI 580
AY+ +SNI + W + + R M+ G++K P S +
Sbjct: 857 AYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/470 (25%), Positives = 224/470 (47%), Gaps = 67/470 (14%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G D A AL++MY K G + +VF++ +D +++ ++
Sbjct: 381 GFYLDSSVAAALISMYSKS---GDIDLSEQVFED-----------LDDIQR-------QN 419
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVK-GMEIH 259
+V N +I +Q+ +A+ + M + L+ D F++ S+L + +D + G ++H
Sbjct: 420 IV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV----LDCLNLGKQVH 473
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFD 319
GY ++ G D+ +GSSL +Y+KC +E S + F +P++D W S+I+G + G
Sbjct: 474 GYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLR 533
Query: 320 QGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLV 379
+ IG F +ML P + + ++V+ C+ +L GK++HG +R G D + S+LV
Sbjct: 534 EAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALV 593
Query: 380 DMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYV 439
+MY+KCG++K+AR ++D++ D V+ +++I G + HG D LF M+ G
Sbjct: 594 NMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSF 653
Query: 440 AFMAVLTACS-----------HA-----GLVDEG---------WKYFNSME---KDFRI- 470
A ++L A + HA GL E + F S++ K F
Sbjct: 654 AISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQI 713
Query: 471 -APGLEHYAAVADLLGRAGRLEEA---YDFISNMGIQPTGSVWSTLLAACRAHKSVELAE 526
P L + A+ + G+ EA Y+ + G +P + +L+AC VE +
Sbjct: 714 NGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESY 773
Query: 527 KVVDKILL---VDPENMGAYVLMSNIYSAAKRWKDAAKL--RIHMRSKGL 571
++ ++ ++PEN YV M + + R ++A +H++ L
Sbjct: 774 FHLNSMVKDYGIEPENR-HYVCMVDALGRSGRLREAESFINNMHIKPDAL 822
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 194/420 (46%), Gaps = 70/420 (16%)
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSIL------- 243
K+FD +P DVVS N +I+G Q+ +F E+L +M + + + S++
Sbjct: 105 KLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQ 164
Query: 244 -PIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDA 302
P+F+E V + I+ G+ + S+LID+++K R E + + F RD+
Sbjct: 165 APLFSELVCC--------HTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVF-----RDS 211
Query: 303 IS-----WNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGK 357
+S WN+IIAG ++N + F +M KP ++SSV+ ACA L L GK
Sbjct: 212 LSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGK 271
Query: 358 QLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHG 417
+ +I+ G +D F+ +++VD+YAKCG++ A +F +I +V+WT ++ G
Sbjct: 272 VVQARVIKCGAED-VFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSN 330
Query: 418 HALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHY 477
A A+ +F++M GV +V++AC +V E
Sbjct: 331 DAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEA-------------------- 370
Query: 478 AAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDP 537
+ + ++ G SV + L++ ++L+E+V + + +
Sbjct: 371 -------------SQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQR 417
Query: 538 ENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLK--KTPACSWIEI------GNKVHTF 589
+N+ ++ S +S +K+ A +L M +GL+ + CS + + G +VH +
Sbjct: 418 QNIVNVMITS--FSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGY 475
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 176/371 (47%), Gaps = 36/371 (9%)
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHV 250
KVF + +V WNT+IAG +N + D+ EM KPDS+T SS+L A
Sbjct: 206 KVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLE 265
Query: 251 DVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIA 310
+ G + I+ G + DVF+ ++++D+YAKC + ++ F +P +SW +++
Sbjct: 266 KLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLS 324
Query: 311 GCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDD 370
G ++ + F++M + V+ + +SVI AC + + Q+H + + GF
Sbjct: 325 GYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYL 384
Query: 371 NKFIASSLVDMYAKCGNIKMARYIF---DKIETRDMVAWTAIIMGCAMHGHALDAVSLFE 427
+ +A++L+ MY+K G+I ++ +F D I+ +++V +I + A+ LF
Sbjct: 385 DSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFT 442
Query: 428 KMLEDGVRPCYVAFMAVLTACS-------------HAGLVDE---GWKYFN------SME 465
+ML++G+R + ++L+ +GLV + G F S+E
Sbjct: 443 RMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLE 502
Query: 466 KDFRIAPGLEH-----YAAVADLLGRAGRLEEAYDFISNM---GIQPTGSVWSTLLAACR 517
+ +++ G+ +A++ G L EA S M G P S + +L C
Sbjct: 503 ESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCS 562
Query: 518 AHKSVELAEKV 528
+H S+ +++
Sbjct: 563 SHPSLPRGKEI 573
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 120/256 (46%), Gaps = 11/256 (4%)
Query: 264 RHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIG 323
R+ DVF+ SL+ Y+ + + + F +P D +S N +I+G Q+ F++ +
Sbjct: 77 RYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLR 136
Query: 324 FFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGC-IIRLGFDDNKFIASSLVDMY 382
FF +M + ++S+ SVI AC+ L A L +L C I++G+ + + S+L+D++
Sbjct: 137 FFSKMHFLGFEANEISYGSVISACSALQA-PLFSELVCCHTIKMGYFFYEVVESALIDVF 195
Query: 383 AKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFM 442
+K + A +F + ++ W II G + + LF +M +P +
Sbjct: 196 SKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYS 255
Query: 443 AVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHY---AAVADLLGRAGRLEEAYDFISN 499
+VL AC+ + F + + I G E A+ DL + G + EA + S
Sbjct: 256 SVLAACASLEKLR-----FGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSR 310
Query: 500 MGIQPTGSVWSTLLAA 515
+ P+ W+ +L+
Sbjct: 311 IP-NPSVVSWTVMLSG 325
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 292 bits (747), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 144/455 (31%), Positives = 254/455 (55%), Gaps = 35/455 (7%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
+D VF + +V + +I G +G + + + M + + PD++ ++S+L
Sbjct: 77 VDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVL-- 134
Query: 246 FAEHVDVVKGMEIHGYAIRHGF-------------------------------DGDVFIG 274
+ D+ EIH ++ GF D D
Sbjct: 135 --KACDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAA 192
Query: 275 SSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVK 334
+ +I+ Y++C ++ +L F + +D + W ++I G V+N + ++ + FR+M V
Sbjct: 193 TVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVS 252
Query: 335 PMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYI 394
+ + V+ AC+ L AL LG+ +H + + + F+ ++L++MY++CG+I AR +
Sbjct: 253 ANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRV 312
Query: 395 FDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLV 454
F + +D++++ +I G AMHG +++A++ F M+ G RP V +A+L ACSH GL+
Sbjct: 313 FRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLL 372
Query: 455 DEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLA 514
D G + FNSM++ F + P +EHY + DLLGR GRLEEAY FI N+ I+P + TLL+
Sbjct: 373 DIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLS 432
Query: 515 ACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKT 574
AC+ H ++EL EK+ ++ + + G YVL+SN+Y+++ +WK++ ++R MR G++K
Sbjct: 433 ACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKE 492
Query: 575 PACSWIEIGNKVHTFLAGDKSHPYYDKINEALNIL 609
P CS IE+ N++H FL GD +HP+ + I + L L
Sbjct: 493 PGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQEL 527
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 131/296 (44%), Gaps = 41/296 (13%)
Query: 234 PDSFTL-----SSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVE 288
PDS TL +++ + ++ IH IR D D F+ LI + + + V+
Sbjct: 19 PDSNTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVD 78
Query: 289 HSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACA 348
++ F + + + ++I G V +G+ G+ + +M+ V P +SV+ AC
Sbjct: 79 YAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC- 137
Query: 349 HLTALNLGKQLHGCIIRLGF-------------------------------DDNKFIASS 377
L + +++H +++LGF D + A+
Sbjct: 138 ---DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATV 194
Query: 378 LVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPC 437
+++ Y++CG IK A +F ++ +D V WTA+I G + A+ LF +M + V
Sbjct: 195 MINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSAN 254
Query: 438 YVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEA 493
+ VL+ACS G ++ G ++ +S ++ R+ A+ ++ R G + EA
Sbjct: 255 EFTAVCVLSACSDLGALELG-RWVHSFVENQRMELSNFVGNALINMYSRCGDINEA 309
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 93/194 (47%), Gaps = 28/194 (14%)
Query: 142 LDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDV 201
++ + NAL+NMY + +I+ R+VF +M +DV
Sbjct: 286 MELSNFVGNALINMYSRCG------------------------DINEARRVFRVMRDKDV 321
Query: 202 VSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGY 261
+S+NT+I+G A +G EA++ R+M + +P+ TL ++L + + G+E+
Sbjct: 322 ISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFN- 380
Query: 262 AIRHGFDGDVFIG--SSLIDMYAKCNRVEHSLRAFYLLPYR-DAISWNSIIAGCVQNGKF 318
+++ F+ + I ++D+ + R+E + R +P D I ++++ C +G
Sbjct: 381 SMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNM 440
Query: 319 DQGIGFFRQMLKAK 332
+ G +++ +++
Sbjct: 441 ELGEKIAKRLFESE 454
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 30/210 (14%)
Query: 342 SVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR 401
SV+ +C ++ + +H IIR D + F+ L+ + + ++ A +F +
Sbjct: 34 SVLRSCKNIAHV---PSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNP 90
Query: 402 DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACS-------HAGLV 454
++ +TA+I G G + D VSL+ +M+ + V P +VL AC HA ++
Sbjct: 91 NVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQVL 150
Query: 455 DEGWKYFNSM-----------------EKDFRIAPGLEHYAAVA--DLLGRAGRLEEAYD 495
G+ S+ +K F P +H AA + G ++EA +
Sbjct: 151 KLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALE 210
Query: 496 FISNMGIQPTGSVWSTLLAACRAHKSVELA 525
++ I+ T W+ ++ +K + A
Sbjct: 211 LFQDVKIKDT-VCWTAMIDGLVRNKEMNKA 239
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 292 bits (747), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 164/479 (34%), Positives = 261/479 (54%), Gaps = 30/479 (6%)
Query: 106 GISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGF 165
G SP FP + KA G D+Y N+L++ Y
Sbjct: 101 GFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFY--------- 151
Query: 166 GSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVR 225
G E + KVF MP RDVVSW +I G + G+++EALD
Sbjct: 152 ---------------GVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFS 196
Query: 226 EMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCN 285
+M ++P+ T +L + G IHG ++ + G++LIDMY KC
Sbjct: 197 KM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCE 253
Query: 286 RVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQM-LKAKVKPMQVSFSSVI 344
++ ++R F L +D +SWNS+I+G V + + I F M + +KP +SV+
Sbjct: 254 QLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVL 313
Query: 345 PACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMV 404
ACA L A++ G+ +H I+ G + I +++VDMYAKCG I+ A IF+ I ++++
Sbjct: 314 SACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVF 373
Query: 405 AWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSM 464
W A++ G A+HGH L+++ FE+M++ G +P V F+A L AC H GLVDEG +YF+ M
Sbjct: 374 TWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKM 433
Query: 465 E-KDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSV- 522
+ +++ + P LEHY + DLL RAG L+EA + + M ++P + +L+AC+ ++
Sbjct: 434 KSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLM 493
Query: 523 ELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIE 581
EL ++++D L ++ E+ G YVL+SNI++A +RW D A++R M+ KG+ K P S+IE
Sbjct: 494 ELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 156/324 (48%), Gaps = 18/324 (5%)
Query: 203 SWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYA 262
S+NT+++ A R + + + PD FT + + + +G +IHG
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 263 IRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGI 322
+ GF D+++ +SL+ Y C ++ + F +P RD +SW II G + G + + +
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 323 GFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMY 382
F +M V+P ++ V+ + + L+LGK +HG I++ + ++L+DMY
Sbjct: 193 DTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMY 249
Query: 383 AKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM-LEDGVRPCYVAF 441
KC + A +F ++E +D V+W ++I G + +A+ LF M G++P
Sbjct: 250 VKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHIL 309
Query: 442 MAVLTACSHAGLVDEG-WKYFNSMEKDFRIAPGLE---HYA-AVADLLGRAGRLEEAYDF 496
+VL+AC+ G VD G W + ++ + G++ H A+ D+ + G +E A +
Sbjct: 310 TSVLSACASLGAVDHGRWVH------EYILTAGIKWDTHIGTAIVDMYAKCGYIETALEI 363
Query: 497 ISNMGIQPTGS-VWSTLLAACRAH 519
+ GI+ W+ LL H
Sbjct: 364 FN--GIRSKNVFTWNALLGGLAIH 385
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 131/301 (43%), Gaps = 53/301 (17%)
Query: 272 FIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKA 331
F+G S D + + + HS+R+ + S+N++++ K I ++ +
Sbjct: 47 FLGKS-ADFASYSSVILHSIRSVL-----SSFSYNTLLSSYAVCDKPRVTIFAYKTFVSN 100
Query: 332 KVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMA 391
P +F V AC + + GKQ+HG + ++GF D+ ++ +SLV Y CG + A
Sbjct: 101 GFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNA 160
Query: 392 RYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHA 451
+F ++ RD+V+WT II G G +A+ F KM V P ++ VL +
Sbjct: 161 CKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRV 217
Query: 452 G--------------------------LVD---------EGWKYFNSMEKDFRIAPGLEH 476
G L+D + + F +EK +++
Sbjct: 218 GCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVS----- 272
Query: 477 YAAVADLLGRAGRLEEAYDFISNM----GIQPTGSVWSTLLAACRAHKSVELAEKVVDKI 532
+ ++ L R +EA D S M GI+P G + +++L+AC + +V+ V + I
Sbjct: 273 WNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYI 332
Query: 533 L 533
L
Sbjct: 333 L 333
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 291 bits (746), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 146/394 (37%), Positives = 233/394 (59%), Gaps = 6/394 (1%)
Query: 190 RKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDK-LKPDSFTLSSILPIFAE 248
R+VFD MP DV+ W V++ ++N ++ EAL + M K L PD T ++L
Sbjct: 218 RRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGN 277
Query: 249 HVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSI 308
+ +G EIHG I +G +V + SSL+DMY KC V + + F + ++++SW+++
Sbjct: 278 LRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSAL 337
Query: 309 IAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGF 368
+ G QNG+ ++ I FR+M + + F +V+ ACA L A+ LGK++HG +R G
Sbjct: 338 LGGYCQNGEHEKAIEIFREMEEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGC 393
Query: 369 DDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEK 428
N + S+L+D+Y K G I A ++ K+ R+M+ W A++ A +G +AVS F
Sbjct: 394 FGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFND 453
Query: 429 MLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAG 488
M++ G++P Y++F+A+LTAC H G+VDEG YF M K + I PG EHY+ + DLLGRAG
Sbjct: 454 MVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAG 513
Query: 489 RLEEAYDFISNMGIQPTGSVWSTLLAACRAHK-SVELAEKVVDKILLVDPENMGAYVLMS 547
EEA + + + S+W LL C A+ + +AE++ +++ ++P+ +YVL+S
Sbjct: 514 LFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLS 573
Query: 548 NIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIE 581
N+Y A R DA +R M +G+ KT SWI+
Sbjct: 574 NMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 159 bits (402), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 201/437 (45%), Gaps = 34/437 (7%)
Query: 100 NAMRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKV 159
N+ + I T + SLL+ GL+ D N+L+++Y K+
Sbjct: 50 NSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKL 109
Query: 160 QNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFRE 219
G G + R+VFD +D +SW ++++G +
Sbjct: 110 -------------------GPGMR----ETRRVFDGRFVKDAISWTSMMSGYVTGKEHVK 146
Query: 220 ALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLID 279
AL++ EM L + FTLSS + +E +V G HG I HGF+ + FI S+L
Sbjct: 147 ALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAY 206
Query: 280 MYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAK-VKPMQV 338
+Y + R F +P D I W ++++ +N +++ +G F M + K + P
Sbjct: 207 LYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGS 266
Query: 339 SFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKI 398
+F +V+ AC +L L GK++HG +I G N + SSL+DMY KCG+++ AR +F+ +
Sbjct: 267 TFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGM 326
Query: 399 ETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGW 458
++ V+W+A++ G +G A+ +F +M E + F VL AC+ V G
Sbjct: 327 SKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL----YCFGTVLKACAGLAAVRLGK 382
Query: 459 KYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAAC-- 516
+ + + +A+ DL G++G ++ A S M I+ W+ +L+A
Sbjct: 383 EIHGQYVRRGCFGNVIVE-SALIDLYGKSGCIDSASRVYSKMSIRNM-ITWNAMLSALAQ 440
Query: 517 --RAHKSVELAEKVVDK 531
R ++V +V K
Sbjct: 441 NGRGEEAVSFFNDMVKK 457
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 182/556 (32%), Positives = 283/556 (50%), Gaps = 66/556 (11%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
+R G+ P P +LK+ GL+FD Y +N+LM MY +
Sbjct: 37 LRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASL-- 94
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
GK I+ KVFD MP RDVVSWN +I+ NG F +A+
Sbjct: 95 -----------------GK-----IEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAI 132
Query: 222 DMVREMGDD-KLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDM 280
+ + M + LK D T+ S L + ++ G I+ + + F+ V IG++L+DM
Sbjct: 133 GVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDM 191
Query: 281 YAKCN-------------------------------RVEHSLRAFYLLPYRDAISWNSII 309
+ KC R++ + F P +D + W +++
Sbjct: 192 FCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMM 251
Query: 310 AGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFD 369
G VQ +FD+ + FR M A ++P S++ CA AL GK +HG I
Sbjct: 252 NGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVT 311
Query: 370 DNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM 429
+K + ++LVDMYAKCG I+ A +F +I+ RD +WT++I G AM+G + A+ L+ +M
Sbjct: 312 VDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEM 371
Query: 430 LEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGR 489
GVR + F+AVLTAC+H G V EG K F+SM + + P EH + + DLL RAG
Sbjct: 372 ENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGL 431
Query: 490 LEEAYDFISNMGIQPTGS---VWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLM 546
L+EA + I M + + V+ +LL+A R + +V++AE+V +K+ V+ + A+ L+
Sbjct: 432 LDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLL 491
Query: 547 SNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDK--SHPYYDKINE 604
+++Y++A RW+D +R M+ G++K P CS IEI H F+ GD SHP D+IN
Sbjct: 492 ASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINS 551
Query: 605 AL----NILLEQMEKE 616
L N++L+ KE
Sbjct: 552 MLHQTTNLMLDLEHKE 567
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 177/351 (50%), Gaps = 35/351 (9%)
Query: 195 LMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVK 254
L+ ++ +N ++ A F + L + E+ L PD+FTL +L V++
Sbjct: 5 LLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIE 64
Query: 255 GMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQ 314
G ++HGYA++ G + D ++ +SL+ MYA ++E + + F +P RD +SWN +I+ V
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 315 NGKFDQGIGFFRQM-LKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKF 373
NG+F+ IG F++M ++ +K + + S + AC+ L L +G++++ ++ F+ +
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT-EFEMSVR 183
Query: 374 IASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEK----- 428
I ++LVDM+ KCG + AR +FD + +++ WT+++ G G +A LFE+
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKD 243
Query: 429 --------------------------MLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFN 462
M G+RP +++LT C+ G +++G K+ +
Sbjct: 244 VVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQG-KWIH 302
Query: 463 SMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLL 513
+ R+ A+ D+ + G +E A + + + T S W++L+
Sbjct: 303 GYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTAS-WTSLI 352
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 290 bits (742), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 162/487 (33%), Positives = 256/487 (52%), Gaps = 37/487 (7%)
Query: 106 GISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGF 165
G SP FP +LKA + G + ++Y + L++MY
Sbjct: 102 GYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYM-------- 153
Query: 166 GSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVR 225
C E++ +VF+ +P +VV+W ++I+G N F +A++ R
Sbjct: 154 ----------------CCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFR 197
Query: 226 EMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDG--------DVFIGSSL 277
EM + +K + + +L D+V G HG+ GFD +V + +SL
Sbjct: 198 EMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSL 257
Query: 278 IDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQ 337
IDMYAKC + + F +P R +SWNSII G QNG ++ + F ML + P +
Sbjct: 258 IDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDK 317
Query: 338 VSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDK 397
V+F SVI A LG+ +H + + GF + I +LV+MYAK G+ + A+ F+
Sbjct: 318 VTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFED 377
Query: 398 IETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDG-VRPCYVAFMAVLTACSHAGLVDE 456
+E +D +AWT +I+G A HGH +A+S+F++M E G P + ++ VL ACSH GLV+E
Sbjct: 378 LEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEE 437
Query: 457 GWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAAC 516
G +YF M + P +EHY + D+L RAGR EEA + M ++P ++W LL C
Sbjct: 438 GQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGC 497
Query: 517 RAHKSVELAEKVVDKILLVDPENMGA--YVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKT 574
H+++EL +++ + ++ +PE +G+ YVL+SNIY+ A RW D +R M+SK + K
Sbjct: 498 DIHENLELTDRI--RSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKV 555
Query: 575 PACSWIE 581
S +E
Sbjct: 556 LGHSSVE 562
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 171/343 (49%), Gaps = 20/343 (5%)
Query: 190 RKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEH 249
R VF+ + V WN++I G + + +AL +EM PD FT +L +
Sbjct: 61 RSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGL 120
Query: 250 VDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSII 309
D+ G +HG+ ++ GF+ ++++ + L+ MY C V + LR F +P + ++W S+I
Sbjct: 121 RDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLI 180
Query: 310 AGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFD 369
+G V N +F I FR+M VK + ++ AC + GK HG + LGFD
Sbjct: 181 SGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFD 240
Query: 370 D--------NKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALD 421
N +A+SL+DMYAKCG+++ ARY+FD + R +V+W +II G + +G A +
Sbjct: 241 PYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEE 300
Query: 422 AVSLFEKMLEDGVRPCYVAFMAVLTA-----CSHAGLVDEGWKYFNSMEKDFRIAPGLEH 476
A+ +F ML+ G+ P V F++V+ A CS G + KD I
Sbjct: 301 ALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIV----- 355
Query: 477 YAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAH 519
A+ ++ + G E A ++ + T W+ ++ +H
Sbjct: 356 -CALVNMYAKTGDAESAKKAFEDLEKKDT-IAWTVVIIGLASH 396
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 328 MLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCG- 386
M+K KP+ S + C L LN QLHG +I+ N S L+D C
Sbjct: 1 MMKKHYKPIL----SQLENCRSLVELN---QLHGLMIKSSVIRNVIPLSRLIDFCTTCPE 53
Query: 387 --NIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAV 444
N+ AR +F+ I+ + W ++I G + + A+ +++ML G P Y F V
Sbjct: 54 TMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYV 113
Query: 445 LTACSHAGLVDEGWKYFNSMEKDFRIAPGLE 475
L ACS GL D F S F + G E
Sbjct: 114 LKACS--GLRD---IQFGSCVHGFVVKTGFE 139
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 289 bits (740), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 148/415 (35%), Positives = 243/415 (58%), Gaps = 6/415 (1%)
Query: 203 SWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYA 262
+WN + G + + E++ + EM +KP+ T +L A + + G +I
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 263 IRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGI 322
++HGFD DV++G++LI +Y C + + + F + R+ +SWNSI+ V+NGK +
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVF 199
Query: 323 GFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMY 382
F +M+ + P + + ++ AC L+LGK +H ++ + N + ++LVDMY
Sbjct: 200 ECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMY 257
Query: 383 AKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKML-EDGVRPCYVAF 441
AK G ++ AR +F+++ +++ W+A+I+G A +G A +A+ LF KM+ E VRP YV F
Sbjct: 258 AKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTF 317
Query: 442 MAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMG 501
+ VL ACSH GLVD+G+KYF+ MEK +I P + HY A+ D+LGRAGRL EAYDFI M
Sbjct: 318 LGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMP 377
Query: 502 IQPTGSVWSTLLAACRAHKSVE---LAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKD 558
+P VW TLL+AC H + + EKV +++ ++P+ G V+++N ++ A+ W +
Sbjct: 378 FEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAE 437
Query: 559 AAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQM 613
AA++R M+ +KK S +E+G H F +G Y I E L++ Q+
Sbjct: 438 AAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELLDLFKFQL 492
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 150/333 (45%), Gaps = 30/333 (9%)
Query: 100 NAMRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKV 159
+ M+ GI P + FP LLKA G DFD+Y N L+++Y
Sbjct: 102 SEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLY--- 158
Query: 160 QNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFRE 219
G+ K D RKVFD M R+VVSWN+++ +NG
Sbjct: 159 ------GTCKKTSD---------------ARKVFDEMTERNVVSWNSIMTALVENGKLNL 197
Query: 220 ALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLID 279
+ EM + PD T+ +L ++ + G +H + + + +G++L+D
Sbjct: 198 VFECFCEMIGKRFCPDETTMVVLLSACGGNLSL--GKLVHSQVMVRELELNCRLGTALVD 255
Query: 280 MYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLK-AKVKPMQV 338
MYAK +E++ F + ++ +W+++I G Q G ++ + F +M+K + V+P V
Sbjct: 256 MYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYV 315
Query: 339 SFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFI-ASSLVDMYAKCGNIKMARYIFDK 397
+F V+ AC+H ++ G + + ++ I ++VD+ + G + A K
Sbjct: 316 TFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKK 375
Query: 398 IETR-DMVAWTAIIMGCAMHGHALDAVSLFEKM 429
+ D V W ++ C++H H D + EK+
Sbjct: 376 MPFEPDAVVWRTLLSACSIH-HDEDDEGIGEKV 407
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 289 bits (740), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 167/495 (33%), Positives = 255/495 (51%), Gaps = 45/495 (9%)
Query: 149 ANALMNMYCKVQNLGGFGSANKVFDE----------NPQRGKGCKCEIDSVRKVFDLMPA 198
+N L+ MY K G A KVFD+ N G + R VFD MP
Sbjct: 85 SNHLIGMYMKC---GKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPE 141
Query: 199 RDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEI 258
RDVVSWNT++ G AQ+G EAL +E +K + F+ + +L + + +
Sbjct: 142 RDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQA 201
Query: 259 HGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRA------------------------- 293
HG + GF +V + S+ID YAKC ++E + R
Sbjct: 202 HGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDM 261
Query: 294 ------FYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPAC 347
F +P ++ +SW ++IAG V+ G ++ + FR+M+ VKP Q +FSS + A
Sbjct: 262 EAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCAS 321
Query: 348 AHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR-DMVAW 406
A + +L GK++HG +IR N + SSL+DMY+K G+++ + +F + + D V W
Sbjct: 322 ASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFW 381
Query: 407 TAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEK 466
+I A HG A+ + + M++ V+P + +L ACSH+GLV+EG ++F SM
Sbjct: 382 NTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTV 441
Query: 467 DFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAE 526
I P EHYA + DLLGRAG +E I M +P +W+ +L CR H + EL +
Sbjct: 442 QHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGK 501
Query: 527 KVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKV 586
K D+++ +DPE+ Y+L+S+IY+ +W+ KLR M+ + + K A SWIEI KV
Sbjct: 502 KAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKV 561
Query: 587 HTFLAGDKSHPYYDK 601
F D SH + K
Sbjct: 562 EAFTVSDGSHAHARK 576
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 288 bits (738), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 145/464 (31%), Positives = 263/464 (56%), Gaps = 32/464 (6%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLK-PDSFTLSSIL 243
++D ++F+ + +V +N++I N ++ + + + +++ + PD FT +
Sbjct: 57 DMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMF 116
Query: 244 PIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAI 303
A G ++HG+ + G V ++LIDMY K + + + + F + RD I
Sbjct: 117 KSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVI 176
Query: 304 SWNSIIAGCVQNGKFDQ------------------------GIG-------FFRQMLKAK 332
SWNS+++G + G+ + GIG FFR+M A
Sbjct: 177 SWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAG 236
Query: 333 VKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMAR 392
++P ++S SV+P+CA L +L LGK +H R GF + ++L++MY+KCG I A
Sbjct: 237 IEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAI 296
Query: 393 YIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAG 452
+F ++E +D+++W+ +I G A HG+A A+ F +M V+P + F+ +L+ACSH G
Sbjct: 297 QLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVG 356
Query: 453 LVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTL 512
+ EG +YF+ M +D++I P +EHY + D+L RAG+LE A + M ++P +W +L
Sbjct: 357 MWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSL 416
Query: 513 LAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLK 572
L++CR ++++A +D ++ ++PE+MG YVL++NIY+ +W+D ++LR +R++ +K
Sbjct: 417 LSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMK 476
Query: 573 KTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKE 616
KTP S IE+ N V F++GD S P++ +I+ L + +++
Sbjct: 477 KTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQLFTSHQDQD 520
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 161/336 (47%), Gaps = 17/336 (5%)
Query: 109 PTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGFGSA 168
P R FP + K+ G F + T NAL++MY K +L A
Sbjct: 107 PDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLV---DA 163
Query: 169 NKVFDENPQR----------GKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFR 218
+KVFDE +R G ++ + +F LM + +VSW +I+G G +
Sbjct: 164 HKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYV 223
Query: 219 EALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLI 278
EA+D REM ++PD +L S+LP A+ + G IH YA R GF + ++LI
Sbjct: 224 EAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALI 283
Query: 279 DMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQV 338
+MY+KC + +++ F + +D ISW+++I+G +G I F +M +AKVKP +
Sbjct: 284 EMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGI 343
Query: 339 SFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIA--SSLVDMYAKCGNIKMARYIFD 396
+F ++ AC+H+ G + ++R + I L+D+ A+ G ++ A I
Sbjct: 344 TFLGLLSACSHVGMWQEGLRYFD-MMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITK 402
Query: 397 KIETR-DMVAWTAIIMGCAMHGHALDAVSLFEKMLE 431
+ + D W +++ C G+ A+ + ++E
Sbjct: 403 TMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVE 438
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 134/296 (45%), Gaps = 36/296 (12%)
Query: 257 EIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNG 316
+I+ I HG F+ + ++D K ++++ R F + + +NSII N
Sbjct: 28 KINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNS 87
Query: 317 KFDQGIGFFRQMLKAKVK-PMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIA 375
+ I ++Q+L+ + P + +F + +CA L + LGKQ+HG + + G +
Sbjct: 88 LYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTE 147
Query: 376 SSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLED--- 432
++L+DMY K ++ A +FD++ RD+++W +++ G A G A LF ML+
Sbjct: 148 NALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIV 207
Query: 433 ----------------------------GVRPCYVAFMAVLTACSHAGLVDEG-WKYFNS 463
G+ P ++ ++VL +C+ G ++ G W + +
Sbjct: 208 SWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYA 267
Query: 464 MEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAH 519
+ F G+ + A+ ++ + G + +A M + S WST+++ H
Sbjct: 268 ERRGFLKQTGVCN--ALIEMYSKCGVISQAIQLFGQMEGKDVIS-WSTMISGYAYH 320
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 153/445 (34%), Positives = 261/445 (58%), Gaps = 14/445 (3%)
Query: 183 KCEI-DSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
KC + ++V+ VF M R+VVSW T+I+ N +A+ + M D + P+ T
Sbjct: 323 KCGVLEAVKSVFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVYPNEVTFVG 377
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
++ + + +G++IHG I+ GF + +G+S I +YAK +E + +AF + +R+
Sbjct: 378 LINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFRE 437
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNL--GKQL 359
ISWN++I+G QNG + + F A+ P + +F SV+ A A +++ G++
Sbjct: 438 IISWNAMISGFAQNGFSHEALKMFLSA-AAETMPNEYTFGSVLNAIAFAEDISVKQGQRC 496
Query: 360 HGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHA 419
H +++LG + ++S+L+DMYAK GNI + +F+++ ++ WT+II + HG
Sbjct: 497 HAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDF 556
Query: 420 LDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAA 479
++LF KM+++ V P V F++VLTAC+ G+VD+G++ FN M + + + P EHY+
Sbjct: 557 ETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSC 616
Query: 480 VADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPEN 539
+ D+LGRAGRL+EA + +S + P S+ ++L +CR H +V++ KV + + + PE
Sbjct: 617 MVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPEL 676
Query: 540 MGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGN-----KVHTFLAGDK 594
G+YV M NIY+ + W AA++R MR K + K SWI++G+ + F +GDK
Sbjct: 677 SGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDK 736
Query: 595 SHPYYDKINEALNILLEQMEKEGYV 619
SHP D+I + I+ +M EG V
Sbjct: 737 SHPKSDEIYRMVEIIGLEMNLEGKV 761
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 149/275 (54%), Gaps = 9/275 (3%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
D+ +F+ + DVVSWNT+++G N + AL+ V M + D+FT S+ L
Sbjct: 127 FDNALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSF 183
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISW 305
+ G+++ ++ G + D+ +G+S I MY++ + R F + ++D ISW
Sbjct: 184 CVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISW 243
Query: 306 NSIIAGCVQNGKFD-QGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCII 364
NS+++G Q G F + + FR M++ V+ VSF+SVI C H T L L +Q+HG I
Sbjct: 244 NSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCI 303
Query: 365 RLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVS 424
+ G++ + + L+ Y+KCG ++ + +F ++ R++V+WT +I + DAVS
Sbjct: 304 KRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVS 358
Query: 425 LFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWK 459
+F M DGV P V F+ ++ A + EG K
Sbjct: 359 IFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLK 393
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 138/284 (48%), Gaps = 23/284 (8%)
Query: 168 ANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREM 227
A+K+FD + QR + PAR + ++ N Q G F +D V
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARAL----SIFKENLQLGYFGRHMDEV--- 79
Query: 228 GDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRV 287
+ L + A D+ +G +IHG++ GF V + ++++ MY K R
Sbjct: 80 ------------TLCLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRF 127
Query: 288 EHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPAC 347
+++L F L D +SWN+I++G N + F +M A V ++S+ + C
Sbjct: 128 DNALCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFC 184
Query: 348 AHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWT 407
LG QL +++ G + + + +S + MY++ G+ + AR +FD++ +DM++W
Sbjct: 185 VGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWN 244
Query: 408 AIIMGCAMHG-HALDAVSLFEKMLEDGVRPCYVAFMAVLTACSH 450
+++ G + G +AV +F M+ +GV +V+F +V+T C H
Sbjct: 245 SLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCH 288
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 154/441 (34%), Positives = 243/441 (55%), Gaps = 40/441 (9%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
I RKVFD MP RD ++W T+++ +R LDM DS +S+
Sbjct: 920 IREARKVFDEMPERDDIAWTTMVSA------YRRVLDM-----------DS--ANSLANQ 960
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISW 305
+E + + LI+ Y +E + F +P +D ISW
Sbjct: 961 MSEKNEAT--------------------SNCLINGYMGLGNLEQAESLFNQMPVKDIISW 1000
Query: 306 NSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIR 365
++I G QN ++ + I F +M++ + P +V+ S+VI ACAHL L +GK++H ++
Sbjct: 1001 TTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQ 1060
Query: 366 LGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSL 425
GF + +I S+LVDMY+KCG+++ A +F + +++ W +II G A HG A +A+ +
Sbjct: 1061 NGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKM 1120
Query: 426 FEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLG 485
F KM + V+P V F++V TAC+HAGLVDEG + + SM D+ I +EHY + L
Sbjct: 1121 FAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFS 1180
Query: 486 RAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVL 545
+AG + EA + I NM +P +W LL CR HK++ +AE +K+++++P N G Y L
Sbjct: 1181 KAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFL 1240
Query: 546 MSNIYSAAKRWKDAAKLRIHMRSKGLKKT-PACSWIEIGNKVHTFLAGDKSHPYYDKINE 604
+ ++Y+ RW+D A++R MR G++K P S I I + H F A DKSH D++
Sbjct: 1241 LVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCL 1300
Query: 605 ALNILLEQMEKEGYVLDTSEV 625
L+ + +QM GYV +T V
Sbjct: 1301 LLDEIYDQMGLAGYVQETENV 1321
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 139/337 (41%), Gaps = 76/337 (22%)
Query: 263 IRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGI 322
I+ + D + + I R++ ++ + + +N++ G V + +
Sbjct: 797 IKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSL 856
Query: 323 GFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMY 382
+ +ML+ V P ++SS++ A + A G+ L I + GF + I ++L+D Y
Sbjct: 857 ELYVRMLRDSVSPSSYTYSSLVKASSF--ASRFGESLQAHIWKFGFGFHVKIQTTLIDFY 914
Query: 383 AKCGNIKMARYIFDKIETRDMVAWTAIIMG--------------------------CAMH 416
+ G I+ AR +FD++ RD +AWT ++ C ++
Sbjct: 915 SATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLIN 974
Query: 417 GHA-----LDAVSLFEKM-------------------------------LEDGVRPCYVA 440
G+ A SLF +M +E+G+ P V
Sbjct: 975 GYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVT 1034
Query: 441 FMAVLTACSHAGLVDEGWK-YFNSMEKDFRIAPGLEHY--AAVADLLGRAGRLEEAYDFI 497
V++AC+H G+++ G + + +++ F L+ Y +A+ D+ + G LE A
Sbjct: 1035 MSTVISACAHLGVLEIGKEVHMYTLQNGFV----LDVYIGSALVDMYSKCGSLERALLVF 1090
Query: 498 SNMGIQPTGSV--WSTLLAACRAHKSVELAEKVVDKI 532
N+ P ++ W++++ AH + A K+ K+
Sbjct: 1091 FNL---PKKNLFCWNSIIEGLAAHGFAQEALKMFAKM 1124
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/423 (34%), Positives = 246/423 (58%)
Query: 192 VFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVD 251
+F+ M RDVVSW ++I + G +A++ +M + ++ P+ T +S+ A
Sbjct: 266 LFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSR 325
Query: 252 VVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAG 311
+V G ++H + G + + + +S++ MY+ C + + F + RD ISW++II G
Sbjct: 326 LVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGG 385
Query: 312 CVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDN 371
Q G ++G +F M ++ KP + +S++ ++ + G+Q+H + G + N
Sbjct: 386 YCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQN 445
Query: 372 KFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLE 431
+ SSL++MY+KCG+IK A IF + + D+V+ TA+I G A HG + +A+ LFEK L+
Sbjct: 446 STVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLK 505
Query: 432 DGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLE 491
G RP V F++VLTAC+H+G +D G+ YFN M++ + + P EHY + DLL RAGRL
Sbjct: 506 VGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLS 565
Query: 492 EAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYS 551
+A I+ M + VW+TLL AC+A +E + ++IL +DP A V ++NIYS
Sbjct: 566 DAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYS 625
Query: 552 AAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLE 611
+ ++AA +R +M++KG+ K P S I+I + V F++GD+ HP + I L + +
Sbjct: 626 STGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILELAVS 685
Query: 612 QME 614
E
Sbjct: 686 GAE 688
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 146/266 (54%), Gaps = 2/266 (0%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMG--DDKLKPDSFTLSSIL 243
+ + R+VFD MP D+VSW ++I EAL + M D + PD+ LS +L
Sbjct: 56 LRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVL 115
Query: 244 PIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAI 303
+ ++ G +H YA++ V++GSSL+DMY + +++ S R F +P+R+A+
Sbjct: 116 KACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAV 175
Query: 304 SWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCI 363
+W +II G V G++ +G+ +F +M +++ +F+ + ACA L + GK +H +
Sbjct: 176 TWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHV 235
Query: 364 IRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAV 423
I GF +A+SL MY +CG ++ +F+ + RD+V+WT++I+ G + AV
Sbjct: 236 IVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAV 295
Query: 424 SLFEKMLEDGVRPCYVAFMAVLTACS 449
F KM V P F ++ +AC+
Sbjct: 296 ETFIKMRNSQVPPNEQTFASMFSACA 321
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 184/396 (46%), Gaps = 27/396 (6%)
Query: 100 NAMRAL--GISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYC 157
+AMR + +SP +LKA L +Y ++L++MY
Sbjct: 95 SAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYK 154
Query: 158 KVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMF 217
+V GK ID +VF MP R+ V+W +I G G +
Sbjct: 155 RV-------------------GK-----IDKSCRVFSEMPFRNAVTWTAIITGLVHAGRY 190
Query: 218 REALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSL 277
+E L EM + D++T + L A V G IH + I GF + + +SL
Sbjct: 191 KEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSL 250
Query: 278 IDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQ 337
MY +C ++ L F + RD +SW S+I + G+ + + F +M ++V P +
Sbjct: 251 ATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNE 310
Query: 338 VSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDK 397
+F+S+ ACA L+ L G+QLH ++ LG +D+ +++S++ MY+ CGN+ A +F
Sbjct: 311 QTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQG 370
Query: 398 IETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG 457
+ RD+++W+ II G G + F M + G +P A ++L+ + ++ EG
Sbjct: 371 MRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVI-EG 429
Query: 458 WKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEA 493
+ +++ F + +++ ++ + G ++EA
Sbjct: 430 GRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 154/374 (41%), Gaps = 59/374 (15%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
MR + P F S+ A GL+ L +N++M MY N
Sbjct: 301 MRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGN 360
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
L SA+ +F +G +C RD++SW+T+I G Q G E
Sbjct: 361 LV---SASVLF-------QGMRC--------------RDIISWSTIIGGYCQAGFGEEGF 396
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMY 281
M KP F L+S+L + + G ++H A+ G + + + SSLI+MY
Sbjct: 397 KYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMY 456
Query: 282 AKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFS 341
+KC ++ + F D +S ++I G ++GK + I F + LK +P V+F
Sbjct: 457 SKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFI 516
Query: 342 SVIPACAHLTALNLG----------------KQLHGCIIRLGFDDNKFIASSLVDMYAKC 385
SV+ AC H L+LG K+ +GC +VD+ +
Sbjct: 517 SVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGC---------------MVDLLCRA 561
Query: 386 GNIKMARYIFDKIE-TRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRP-CYVAFMA 443
G + A + +++ +D V WT +++ C G E++LE + P C A +
Sbjct: 562 GRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILE--LDPTCATALVT 619
Query: 444 VLTACSHAGLVDEG 457
+ S G ++E
Sbjct: 620 LANIYSSTGNLEEA 633
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 286 bits (733), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 152/436 (34%), Positives = 248/436 (56%), Gaps = 14/436 (3%)
Query: 183 KC-EIDSVRKVFDLMPA--RDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTL 239
KC ++DS + VF+ + R VVSWN++ + G +A + M ++ KPD T
Sbjct: 200 KCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTF 259
Query: 240 SSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPY 299
++ + +G IH +AI G D D+ ++ I MY+K + F ++
Sbjct: 260 INLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTS 319
Query: 300 RDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGK-- 357
R +SW +I+G + G D+ + F M+K+ KP V+ S+I C +L GK
Sbjct: 320 RTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWI 379
Query: 358 ----QLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGC 413
++GC DN I ++L+DMY+KCG+I AR IFD + +V WT +I G
Sbjct: 380 DARADIYGCK-----RDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGY 434
Query: 414 AMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPG 473
A++G L+A+ LF KM++ +P ++ F+AVL AC+H+G +++GW+YF+ M++ + I+PG
Sbjct: 435 ALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPG 494
Query: 474 LEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKIL 533
L+HY+ + DLLGR G+LEEA + I NM +P +W LL AC+ H++V++AE+ + +
Sbjct: 495 LDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLF 554
Query: 534 LVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGD 593
++P+ YV M+NIY+AA W A++R M+ + +KK P S I++ K H+F G+
Sbjct: 555 NLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGE 614
Query: 594 KSHPYYDKINEALNIL 609
H + I LN L
Sbjct: 615 HGHVENEVIYFTLNGL 630
Score = 149 bits (377), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 143/270 (52%), Gaps = 2/270 (0%)
Query: 190 RKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEH 249
R+++ + V +WN I E+L + REM +P++FT + A
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 250 VDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSII 309
DV +H + I+ F DVF+G++ +DM+ KCN V+++ + F +P RDA +WN+++
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 310 AGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFD 369
+G Q+G D+ FR+M ++ P V+ ++I + + +L L + +H IRLG D
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD 185
Query: 370 DNKFIASSLVDMYAKCGNIKMARYIFDKIE--TRDMVAWTAIIMGCAMHGHALDAVSLFE 427
+A++ + Y KCG++ A+ +F+ I+ R +V+W ++ ++ G A DA L+
Sbjct: 186 VQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYC 245
Query: 428 KMLEDGVRPCYVAFMAVLTACSHAGLVDEG 457
ML + +P F+ + +C + + +G
Sbjct: 246 LMLREEFKPDLSTFINLAASCQNPETLTQG 275
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 180/360 (50%), Gaps = 10/360 (2%)
Query: 183 KC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
KC +D KVF+ MP RD +WN +++G Q+G +A + REM +++ PDS T+ +
Sbjct: 99 KCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMT 158
Query: 242 IL--PIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPY 299
++ F + + +++ M H IR G D V + ++ I Y KC ++ + F +
Sbjct: 159 LIQSASFEKSLKLLEAM--HAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDR 216
Query: 300 --RDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGK 357
R +SWNS+ G+ G + ML+ + KP +F ++ +C + L G+
Sbjct: 217 GDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGR 276
Query: 358 QLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHG 417
+H I LG D + ++ + MY+K + AR +FD + +R V+WT +I G A G
Sbjct: 277 LIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKG 336
Query: 418 HALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIA-PGLEH 476
+A++LF M++ G +P V +++++ C G ++ G K+ ++ + +
Sbjct: 337 DMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG-KWIDARADIYGCKRDNVMI 395
Query: 477 YAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVD 536
A+ D+ + G + EA D N + T W+T++A + A K+ K++ +D
Sbjct: 396 CNALIDMYSKCGSIHEARDIFDNTP-EKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLD 454
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 286 bits (733), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 149/443 (33%), Positives = 251/443 (56%), Gaps = 5/443 (1%)
Query: 155 MYCKVQNLGGFGSANKVFDENPQRGKGCKC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQ 213
++CK + FG N VF + KC ++D +F M RDV+ W T++ G AQ
Sbjct: 138 VWCKAVD---FGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQ 194
Query: 214 NGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFI 273
G +A++ REM ++ D + +L + D G +HGY R G +V +
Sbjct: 195 AGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVV 254
Query: 274 GSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKV 333
+SL+DMYAK +E + R F + ++ A+SW S+I+G QNG ++ +M
Sbjct: 255 ETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGF 314
Query: 334 KPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARY 393
+P V+ V+ AC+ + +L G+ +H I++ D + A++L+DMY+KCG + +R
Sbjct: 315 QPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLD-RVTATALMDMYSKCGALSSSRE 373
Query: 394 IFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGL 453
IF+ + +D+V W +I +HG+ + VSLF KM E + P + F ++L+A SH+GL
Sbjct: 374 IFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGL 433
Query: 454 VDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLL 513
V++G +F+ M ++I P +HY + DLL RAGR+EEA D I++ + +W LL
Sbjct: 434 VEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALL 493
Query: 514 AACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKK 573
+ C H+++ + + +KIL ++P+++G L+SN ++ A +WK+ AK+R MR+ ++K
Sbjct: 494 SGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEK 553
Query: 574 TPACSWIEIGNKVHTFLAGDKSH 596
P S IE+ ++ TFL D SH
Sbjct: 554 VPGYSAIEVNGELRTFLMEDLSH 576
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 142/273 (52%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP 244
EI RKVFD +P R V +N++I ++ E L + +M +K++PDS T + +
Sbjct: 65 EISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIK 124
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS 304
+ + KG + A+ G+ DVF+ SS++++Y KC +++ + F + RD I
Sbjct: 125 ACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVIC 184
Query: 305 WNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCII 364
W +++ G Q GK + + F+R+M +V ++ A L +G+ +HG +
Sbjct: 185 WTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLY 244
Query: 365 RLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVS 424
R G N + +SLVDMYAK G I++A +F ++ + V+W ++I G A +G A A
Sbjct: 245 RTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFE 304
Query: 425 LFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG 457
+M G +P V + VL ACS G + G
Sbjct: 305 AVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTG 337
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 125/268 (46%), Gaps = 19/268 (7%)
Query: 257 EIHGYAIRHGFDGDVFIGSSLI-DMYAKCNRV---EHSLRAFYLLPYRDAISWNSIIAGC 312
+IH + I G++ GSS+ D+ A C R+ ++ + F LP R +NS+I
Sbjct: 35 QIHAFVIS---TGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVY 91
Query: 313 VQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNK 372
+ D+ + + QM+ K++P +F+ I AC L G+ + + G+ ++
Sbjct: 92 SRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDV 151
Query: 373 FIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLED 432
F+ SS++++Y KCG + A +F K+ RD++ WT ++ G A G +L AV + +M +
Sbjct: 152 FVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNE 211
Query: 433 GVRPCYVAFMAVLTAC-----SHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRA 487
G V + +L A + G G+ Y + + + L D+ +
Sbjct: 212 GFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSL------VDMYAKV 265
Query: 488 GRLEEAYDFISNMGIQPTGSVWSTLLAA 515
G +E A S M + T W +L++
Sbjct: 266 GFIEVASRVFSRMMFK-TAVSWGSLISG 292
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 144 FDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVS 203
D TA ALM+MY K L S R++F+ + +D+V
Sbjct: 350 LDRVTATALMDMYSKCGAL------------------------SSSREIFEHVGRKDLVC 385
Query: 204 WNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGME-----I 258
WNT+I+ +G +E + + +M + ++PD T +S+L + V +G I
Sbjct: 386 WNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMI 445
Query: 259 HGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS-WNSIIAGCVQNGK 317
+ Y I+ V LID+ A+ RVE +L +A+ W ++++GC+ +
Sbjct: 446 NKYKIQPSEKHYV----CLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRN 501
Query: 318 FDQG 321
G
Sbjct: 502 LSVG 505
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 286 bits (731), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 246/430 (57%), Gaps = 33/430 (7%)
Query: 220 ALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLID 279
A+ + R++ KPD+FT +L I DV G +IHG + GFD V + + LI
Sbjct: 100 AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQ 159
Query: 280 MYAKCN-----------------RVEHSLRAFY--------------LLP--YRDAISWN 306
MY C V ++L A Y ++P R+ +SW
Sbjct: 160 MYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWT 219
Query: 307 SIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRL 366
+I+G ++G+ + I F++ML V+P +V+ +V+ ACA L +L LG+++ +
Sbjct: 220 CVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHR 279
Query: 367 GFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLF 426
G + + ++++DMYAK GNI A +F+ + R++V WT II G A HGH +A+++F
Sbjct: 280 GMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMF 339
Query: 427 EKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGR 486
+M++ GVRP V F+A+L+ACSH G VD G + FNSM + I P +EHY + DLLGR
Sbjct: 340 NRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGR 399
Query: 487 AGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLM 546
AG+L EA + I +M + ++W +LLAA H +EL E+ + +++ ++P N G Y+L+
Sbjct: 400 AGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLL 459
Query: 547 SNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEAL 606
+N+YS RW ++ +R M+ G+KK S IE+ N+V+ F++GD +HP ++I+E L
Sbjct: 460 ANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEIL 519
Query: 607 NILLEQMEKE 616
+ Q++ +
Sbjct: 520 QEMDLQIQSK 529
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 166/346 (47%), Gaps = 21/346 (6%)
Query: 104 ALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLG 163
AL P FP +LK + G D ++ L+ MY G
Sbjct: 109 ALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSC---G 165
Query: 164 GFGSANKVFDENPQR----------GKGCKCEIDSVRKVFDLMP--ARDVVSWNTVIAGN 211
G G A K+FDE + G G E+D R + ++MP R+ VSW VI+G
Sbjct: 166 GLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGY 225
Query: 212 AQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDV 271
A++G EA+++ + M + ++PD TL ++L A+ + G I Y G + V
Sbjct: 226 AKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAV 285
Query: 272 FIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKA 331
+ +++IDMYAK + +L F + R+ ++W +IIAG +G + + F +M+KA
Sbjct: 286 SLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKA 345
Query: 332 KVKPMQVSFSSVIPACAHLTALNLGKQLHGCI-IRLGFDDNKFIASSLVDMYAKCGNIKM 390
V+P V+F +++ AC+H+ ++LGK+L + + G N ++D+ + G ++
Sbjct: 346 GVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLRE 405
Query: 391 ARYIFDKIETRDMVA-WTAIIMGCAMHGHALDAVSLFEKMLEDGVR 435
A + + + A W +++ +H H L+ L E+ L + ++
Sbjct: 406 ADEVIKSMPFKANAAIWGSLLAASNVH-HDLE---LGERALSELIK 447
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 144/329 (43%), Gaps = 45/329 (13%)
Query: 233 KPDSFTLSSILPIFAE----HVDVVKGM-EIHGYAIRHGFDGDVFIGSSLIDMYAKCNRV 287
+ ++ +LSS L F H + +K + + H Y I G + D + I+ + +
Sbjct: 4 RINALSLSSGLNWFVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHL 63
Query: 288 EHSLRAFYLLPYRDAISWNSIIAGCV---QNGKFDQGIGFFRQMLKAKVKPMQVSFSSVI 344
++ F P + N++I + I +R++ KP +F V+
Sbjct: 64 RYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVL 123
Query: 345 PACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDM- 403
++ + G+Q+HG ++ GFD + + + L+ MY CG + AR +FD++ +D+
Sbjct: 124 KIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVN 183
Query: 404 --------------------------------VAWTAIIMGCAMHGHALDAVSLFEKMLE 431
V+WT +I G A G A +A+ +F++ML
Sbjct: 184 VWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLM 243
Query: 432 DGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSME-KDFRIAPGLEHYAAVADLLGRAGRL 490
+ V P V +AVL+AC+ G ++ G + + ++ + A L + AV D+ ++G +
Sbjct: 244 ENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNN--AVIDMYAKSGNI 301
Query: 491 EEAYDFISNMGIQPTGSVWSTLLAACRAH 519
+A D + + W+T++A H
Sbjct: 302 TKALDVFECVN-ERNVVTWTTIIAGLATH 329
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 160/528 (30%), Positives = 284/528 (53%), Gaps = 63/528 (11%)
Query: 145 DLYTANALMNMYCKVQNLGGFGSANKVFDENPQR----------GKGCKCEIDSVRKVFD 194
++ T A+++ Y + + L A +F E P+R G ID ++FD
Sbjct: 108 NVVTWTAMVSGYLRSKQLS---IAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFD 164
Query: 195 LMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVK 254
MP R++VSWN+++ Q G EA+++ M + D + ++++ A++ V +
Sbjct: 165 EMPERNIVSWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLAKNGKVDE 220
Query: 255 GMEIHGYAIRHGFD----GDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIA 310
R FD ++ +++I YA+ NR++ + + F ++P RD SWN++I
Sbjct: 221 A--------RRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMIT 272
Query: 311 GCVQNGKFDQGIGFFRQMLK--------------------------------AKVKPMQV 338
G ++N + ++ G F +M + VKP
Sbjct: 273 GFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVG 332
Query: 339 SFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDK- 397
++ S++ AC+ L L G+Q+H I + N+ + S+L++MY+K G + AR +FD
Sbjct: 333 TYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNG 392
Query: 398 -IETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDE 456
+ RD+++W ++I A HGH +A+ ++ +M + G +P V ++ +L ACSHAGLV++
Sbjct: 393 LVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEK 452
Query: 457 GWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAAC 516
G ++F + +D + EHY + DL GRAGRL++ +FI+ + + S + +L+AC
Sbjct: 453 GMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSAC 512
Query: 517 RAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPA 576
H V +A++VV K+L ++ G YVLMSNIY+A + ++AA++R+ M+ KGLKK P
Sbjct: 513 NVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPG 572
Query: 577 CSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSE 624
CSW+++G + H F+ GDKSHP ++ ++ L+ L +M K V +E
Sbjct: 573 CSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMRKNKNVTSDAE 620
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 199/439 (45%), Gaps = 37/439 (8%)
Query: 179 GKGCKC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSF 237
G+ CK +I RK+FD +P RDVV+W VI G + G REA ++ + K +
Sbjct: 54 GELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRK---NVV 110
Query: 238 TLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLL 297
T ++++ + K + I + + +V +++ID YA+ R++ +L F +
Sbjct: 111 TWTAMVSGYLRS----KQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM 166
Query: 298 PYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGK 357
P R+ +SWNS++ VQ G+ D+ + F +M + V VS+++++ A ++ +
Sbjct: 167 PERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV----VSWTAMVDGLAKNGKVDEAR 222
Query: 358 QLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHG 417
+L C+ + N ++++ YA+ I A +F + RD +W +I G +
Sbjct: 223 RLFDCMP----ERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNR 278
Query: 418 HALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHY 477
A LF++M E V +++ ++T +E F+ M +D + P + Y
Sbjct: 279 EMNKACGLFDRMPEKNV----ISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTY 334
Query: 478 ----AAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKIL 533
+A +DL G ++ + IS Q V S LL + A K+ D L
Sbjct: 335 VSILSACSDLAGLV-EGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGL 393
Query: 534 LVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTP--------ACS---WIEI 582
+ ++ ++ M +Y+ K+A ++ MR G K + ACS +E
Sbjct: 394 VCQ-RDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEK 452
Query: 583 GNKVHTFLAGDKSHPYYDK 601
G + L D+S P ++
Sbjct: 453 GMEFFKDLVRDESLPLREE 471
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 139/311 (44%), Gaps = 30/311 (9%)
Query: 277 LIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPM 336
LI K ++ + + F LP RD ++W +I G ++ G + F ++ K
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRK---- 107
Query: 337 QVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDD----NKFIASSLVDMYAKCGNIKMAR 392
+V+ A ++ KQL I + F + N ++++D YA+ G I A
Sbjct: 108 -----NVVTWTAMVSGYLRSKQL--SIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKAL 160
Query: 393 YIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAG 452
+FD++ R++V+W +++ G +A++LFE+M V V++ A++ + G
Sbjct: 161 ELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV----VSWTAMVDGLAKNG 216
Query: 453 LVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTL 512
VDE + F+ M + I+ + A+ + R++EA M + S W+T+
Sbjct: 217 KVDEARRLFDCMPERNIIS-----WNAMITGYAQNNRIDEADQLFQVMPERDFAS-WNTM 270
Query: 513 LAACRAHKSVELAEKVVDKILLVDPE-NMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGL 571
+ ++ + A + D++ PE N+ ++ M Y K ++A + M G
Sbjct: 271 ITGFIRNREMNKACGLFDRM----PEKNVISWTTMITGYVENKENEEALNVFSKMLRDGS 326
Query: 572 KKTPACSWIEI 582
K +++ I
Sbjct: 327 VKPNVGTYVSI 337
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/444 (36%), Positives = 257/444 (57%), Gaps = 9/444 (2%)
Query: 179 GKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFT 238
GK CE V ++ R++V+WN++I+ A GM +AL + R+M ++KPD+FT
Sbjct: 353 GKLSDCE-----TVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFT 407
Query: 239 LSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLP 298
L+S + V G +IHG+ IR D F+ +SLIDMY+K V+ + F +
Sbjct: 408 LASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIK 466
Query: 299 YRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQ 358
+R ++WNS++ G QNG + I F M + ++ +V+F +VI AC+ + +L GK
Sbjct: 467 HRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKW 526
Query: 359 LHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGH 418
+H +I G D F ++L+DMYAKCG++ A +F + +R +V+W+++I MHG
Sbjct: 527 VHHKLIISGLKD-LFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGR 585
Query: 419 ALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYA 478
A+S F +M+E G +P V FM VL+AC H+G V+EG YFN M K F ++P EH+A
Sbjct: 586 IGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFA 644
Query: 479 AVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPE 538
DLL R+G L+EAY I M SVW +L+ CR H+ +++ + + + + + +
Sbjct: 645 CFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTD 704
Query: 539 NMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPY 598
+ G Y L+SNIY+ W++ +LR M+S LKK P S IEI KV F AG+++
Sbjct: 705 DTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQ 764
Query: 599 YDKINEALNILLEQMEKEGYVLDT 622
D+I L L+ + E +V+D+
Sbjct: 765 TDEIYRFLGN-LQNLTNEEHVVDS 787
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 192/375 (51%), Gaps = 35/375 (9%)
Query: 183 KC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
KC ++ S ++F+ + ++ VSW +I+ + +AL EM ++P+ TL S
Sbjct: 249 KCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYS 308
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDV-FIGSSLIDMYAKCNRVEHSLRAFYLLPYR 300
+L + +G +HG+A+R D + + +L+++YA+C ++ ++ R
Sbjct: 309 VLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDR 368
Query: 301 DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLH 360
+ ++WNS+I+ G Q +G FRQM+ ++KP + +S I AC + + LGKQ+H
Sbjct: 369 NIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIH 428
Query: 361 GCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHAL 420
G +IR D +F+ +SL+DMY+K G++ A +F++I+ R +V W +++ G + +G+++
Sbjct: 429 GHVIRTDVSD-EFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSV 487
Query: 421 DAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG-W---KYFNSMEKD-FRIAPGLE 475
+A+SLF+ M + V F+AV+ ACS G +++G W K S KD F ++
Sbjct: 488 EAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTALID 547
Query: 476 HYAAVADL------------------------LGRAGRLEEAYDFISNM---GIQPTGSV 508
YA DL G GR+ A + M G +P V
Sbjct: 548 MYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVV 607
Query: 509 WSTLLAACRAHKSVE 523
+ +L+AC SVE
Sbjct: 608 FMNVLSACGHSGSVE 622
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 214/458 (46%), Gaps = 43/458 (9%)
Query: 187 DSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIF 246
DS R VF+ P D + +I N + A+D+ + + + F S+L
Sbjct: 51 DSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRAC 110
Query: 247 A---EHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAI 303
A EH+ V G ++HG I+ G D D I +SL+ MY + + + + F +P RD +
Sbjct: 111 AGSREHLSV--GGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLV 168
Query: 304 SWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCI 363
+W+++++ C++NG+ + + F+ M+ V+P V+ SV+ CA L L + + +HG I
Sbjct: 169 AWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQI 228
Query: 364 IRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAV 423
R FD ++ + +SL+ MY+KCG++ + IF+KI ++ V+WTA+I + A+
Sbjct: 229 TRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKAL 288
Query: 424 SLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYA-AVAD 482
F +M++ G+ P V +VL++C GL+ EG K + + P E + A+ +
Sbjct: 289 RSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREG-KSVHGFAVRRELDPNYESLSLALVE 347
Query: 483 LLGRAGRLEE--------------AYD-----------FISNMG---------IQPTGSV 508
L G+L + A++ I +G I+P
Sbjct: 348 LYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFT 407
Query: 509 WSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKL--RIHM 566
++ ++AC V L +++ ++ D + + ++YS + A+ + +I
Sbjct: 408 LASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKH 467
Query: 567 RSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINE 604
RS + C + + GN V D + Y ++NE
Sbjct: 468 RSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNE 505
Score = 159 bits (401), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 156/274 (56%), Gaps = 3/274 (1%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
+ KVFD MP RD+V+W+T+++ +NG +AL M + M DD ++PD+ T+ S++
Sbjct: 152 LSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEG 211
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISW 305
AE + +HG R FD D + +SL+ MY+KC + S R F + ++A+SW
Sbjct: 212 CAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSW 271
Query: 306 NSIIAGCVQNGKF-DQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCII 364
++I+ G+F ++ + F +M+K+ ++P V+ SV+ +C + + GK +HG +
Sbjct: 272 TAMISS-YNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAV 330
Query: 365 RLGFDDN-KFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAV 423
R D N + ++ +LV++YA+CG + + + R++VAW ++I A G + A+
Sbjct: 331 RRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQAL 390
Query: 424 SLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG 457
LF +M+ ++P + ++AC +AGLV G
Sbjct: 391 GLFRQMVTQRIKPDAFTLASSISACENAGLVPLG 424
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 231/402 (57%), Gaps = 4/402 (0%)
Query: 183 KC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
KC +I + R+VF+ D+V W +I G NG EAL + ++M ++KP+ T++S
Sbjct: 289 KCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIAS 348
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
+L ++ G +HG +I+ G D + ++L+ MYAKC + + F + +D
Sbjct: 349 VLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKD 407
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
++WNSII+G QNG + + F +M V P V+ +S+ ACA L +L +G LH
Sbjct: 408 IVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHA 467
Query: 362 CIIRLGF--DDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHA 419
++LGF + + ++L+D YAKCG+ + AR IFD IE ++ + W+A+I G G
Sbjct: 468 YSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDT 527
Query: 420 LDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAA 479
+ ++ LFE+ML+ +P F ++L+AC H G+V+EG KYF+SM KD+ P +HY
Sbjct: 528 IGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTC 587
Query: 480 VADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPEN 539
+ D+L RAG LE+A D I M IQP + L C H +L E V+ K+L + P++
Sbjct: 588 MVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDD 647
Query: 540 MGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIE 581
YVL+SN+Y++ RW A ++R M+ +GL K S +E
Sbjct: 648 ASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 184/358 (51%), Gaps = 14/358 (3%)
Query: 183 KC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
KC EI S KVF+ + R+VV W ++IAG +N + E L + M ++ + + +T +
Sbjct: 188 KCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGT 247
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
++ + + +G HG ++ G + + +SL+DMY KC + ++ R F + D
Sbjct: 248 LIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVD 307
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
+ W ++I G NG ++ + F++M ++KP V+ +SV+ C + L LG+ +HG
Sbjct: 308 LVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHG 367
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALD 421
I++G D +A++LV MYAKC + A+Y+F+ +D+VAW +II G + +G +
Sbjct: 368 LSIKVGIWDTN-VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHE 426
Query: 422 AVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWK-YFNSMEKDFRIAPGLEHYAAV 480
A+ LF +M + V P V ++ +AC+ G + G + S++ F + + A+
Sbjct: 427 ALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTAL 486
Query: 481 ADLLGRAGRLEEA---YDFISNMGIQPTGSVWSTLLAACRAH----KSVELAEKVVDK 531
D + G + A +D I + WS ++ S+EL E+++ K
Sbjct: 487 LDFYAKCGDPQSARLIFDTIE----EKNTITWSAMIGGYGKQGDTIGSLELFEEMLKK 540
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 144/267 (53%), Gaps = 6/267 (2%)
Query: 190 RKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEH 249
R VFD +P D W ++ N E + + + + D S L E
Sbjct: 96 RLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTEL 155
Query: 250 VDVVKGMEIHGYAIR-HGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSI 308
D+ G +IH ++ FD V G L+DMYAKC ++ + + F + R+ + W S+
Sbjct: 156 QDLDNGKKIHCQLVKVPSFDNVVLTG--LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSM 213
Query: 309 IAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGF 368
IAG V+N ++G+ F +M + V + ++ ++I AC L+AL+ GK HGC+++ G
Sbjct: 214 IAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGI 273
Query: 369 DDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEK 428
+ + + +SL+DMY KCG+I AR +F++ D+V WTA+I+G +G +A+SLF+K
Sbjct: 274 ELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQK 333
Query: 429 MLEDGVRPCYVAFMAVLTACSHAGLVD 455
M ++P V +VL+ C GL++
Sbjct: 334 MKGVEIKPNCVTIASVLSGC---GLIE 357
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 148/296 (50%), Gaps = 36/296 (12%)
Query: 144 FDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVS 203
+D ANAL++MY K C D+ + VF++ +D+V+
Sbjct: 375 WDTNVANALVHMYAK-----------------------CYQNRDA-KYVFEMESEKDIVA 410
Query: 204 WNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAI 263
WN++I+G +QNG EAL + M + + P+ T++S+ A + G +H Y++
Sbjct: 411 WNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSV 470
Query: 264 RHGF--DGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQG 321
+ GF V +G++L+D YAKC + + F + ++ I+W+++I G + G
Sbjct: 471 KLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGS 530
Query: 322 IGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASS---- 377
+ F +MLK + KP + +F+S++ AC H +N GK+ + + D F S+
Sbjct: 531 LELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSM----YKDYNFTPSTKHYT 586
Query: 378 -LVDMYAKCGNIKMARYIFDKIETR-DMVAWTAIIMGCAMHGHALDAVSLFEKMLE 431
+VDM A+ G ++ A I +K+ + D+ + A + GC MH + +KML+
Sbjct: 587 CMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLD 642
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 102/204 (50%), Gaps = 2/204 (0%)
Query: 259 HGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKF 318
HG +G GD+ I + L+ +Y + + F +P D W ++ N +
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 319 DQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSL 378
+ + + ++K + + FS + AC L L+ GK++H ++++ DN + + L
Sbjct: 124 VEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDN-VVLTGL 182
Query: 379 VDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCY 438
+DMYAKCG IK A +F+ I R++V WT++I G + + + LF +M E+ V
Sbjct: 183 LDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNE 242
Query: 439 VAFMAVLTACSHAGLVDEGWKYFN 462
+ ++ AC+ + +G K+F+
Sbjct: 243 YTYGTLIMACTKLSALHQG-KWFH 265
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 83/175 (47%), Gaps = 10/175 (5%)
Query: 343 VIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRD 402
++ C ++ +L +Q HG + G + IA+ LV +Y G K AR +FD+I D
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 403 MVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFN 462
W ++ ++ +++ V L++ +++ G R + F L AC+ +D G K
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 463 SMEKDFRIAPGLEH--YAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAA 515
+ K P ++ + D+ + G ++ A+ +++ ++ W++++A
Sbjct: 167 QLVK----VPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNV-VCWTSMIAG 216
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 146/406 (35%), Positives = 234/406 (57%), Gaps = 2/406 (0%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP 244
++++ R++F +P V +WN +++G + + EA+ R+M LKPD TLS IL
Sbjct: 365 DVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILS 424
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFY-LLPYRDAI 303
A + G +IHG IR + I S LI +Y++C ++E S F + D
Sbjct: 425 SCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIA 484
Query: 304 SWNSIIAGCVQNGKFDQGIGFFRQMLKAKVK-PMQVSFSSVIPACAHLTALNLGKQLHGC 362
WNS+I+G N + + FR+M + V P + SF++V+ +C+ L +L G+Q HG
Sbjct: 485 CWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGL 544
Query: 363 IIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDA 422
+++ G+ + F+ ++L DMY KCG I AR FD + ++ V W +I G +G +A
Sbjct: 545 VVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEA 604
Query: 423 VSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVAD 482
V L+ KM+ G +P + F++VLTACSH+GLV+ G + +SM++ I P L+HY + D
Sbjct: 605 VGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVD 664
Query: 483 LLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGA 542
LGRAGRLE+A + + +W LL++CR H V LA +V +K++ +DP++ A
Sbjct: 665 CLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAA 724
Query: 543 YVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHT 588
YVL+SN YS+ ++W D+A L+ M + KTP SW GN + +
Sbjct: 725 YVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGNDLDS 770
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 207/411 (50%), Gaps = 31/411 (7%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGK---------GCKC-EIDSVR 190
G+ D Y N L+++Y + G A KVFDE R CK ++
Sbjct: 36 GMKSDTYLCNRLLDLYIEC---GDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEAC 92
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHV 250
+VFD MP RDVVSWN +I+ + G +AL + + M D P FTL+S+L ++ +
Sbjct: 93 EVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVL 152
Query: 251 DVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNR-VEHSLRAFYLLPYRDAISWNSII 309
D V GM HG A++ G D ++F+G++L+ MYAKC V++ +R F L + +S+ ++I
Sbjct: 153 DGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVI 212
Query: 310 AGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIP------ACAHLTAL---NLGKQLH 360
G + K + + FR M + V+ V S+++ C L+ + LGKQ+H
Sbjct: 213 GGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIH 272
Query: 361 GCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHAL 420
+RLGF + + +SL+++YAK ++ A IF ++ ++V+W +I+G +
Sbjct: 273 CLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSD 332
Query: 421 DAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAV 480
+V +M + G +P V ++VL AC +G V+ G + F+S+ + P + + A+
Sbjct: 333 KSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ-----PSVSAWNAM 387
Query: 481 ADLLGRAGRLEEAYDFISNMGIQ---PTGSVWSTLLAACRAHKSVELAEKV 528
EEA M Q P + S +L++C + +E +++
Sbjct: 388 LSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQI 438
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 187/461 (40%), Gaps = 100/461 (21%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G DL+ N+L+ +Y K +++ G A +F E MP +
Sbjct: 279 GFGGDLHLNNSLLEIYAKNKDMNG---AELIFAE---------------------MPEVN 314
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
VVSWN +I G Q ++++ + M D +P+ T S+L G
Sbjct: 315 VVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVL----------------G 358
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQ 320
R G VE R F +P +WN++++G +++
Sbjct: 359 ACFRSG-------------------DVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEE 399
Query: 321 GIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVD 380
I FRQM +KP + + S ++ +CA L L GKQ+HG +IR N I S L+
Sbjct: 400 AISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIA 459
Query: 381 MYAKCGNIKMARYIFDK-IETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVR-PCY 438
+Y++C ++++ IFD I D+ W ++I G + A+ LF +M + V P
Sbjct: 460 VYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNE 519
Query: 439 VAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFIS 498
+F VL++CS + G ++ + K ++ A+ D+ + G ++ A F
Sbjct: 520 TSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVE-TALTDMYCKCGEIDSARQFFD 578
Query: 499 ----------------------------------NMGIQPTGSVWSTLLAACRAHKSVEL 524
+ G +P G + ++L AC VE
Sbjct: 579 AVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVET 638
Query: 525 AEKVV---DKILLVDPENMGAYVLMSNIYSAAKRWKDAAKL 562
+++ +I ++PE + Y+ + + A R +DA KL
Sbjct: 639 GLEILSSMQRIHGIEPE-LDHYICIVDCLGRAGRLEDAEKL 678
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 174/409 (42%), Gaps = 79/409 (19%)
Query: 239 LSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLP 298
L+S+L + + + G IHG+ +R G D ++ + L+D+Y +C +++ + F +
Sbjct: 9 LASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS 68
Query: 299 YRDAISWNS-------------------------------IIAGCVQNGKFDQGIGFFRQ 327
RD SWN+ +I+ V+ G ++ + +++
Sbjct: 69 VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR 128
Query: 328 MLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGN 387
M+ P + + +SV+ AC+ + G + HG ++ G D N F+ ++L+ MYAKCG
Sbjct: 129 MVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 188
Query: 388 I-KMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLT 446
I +F+ + + V++TA+I G A L+AV +F M E GV+ V +L+
Sbjct: 189 IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Query: 447 -ACSHAGLVDEGWKYFNSMEKD-----FRIAPG---------LEHYAAVADL-------- 483
+ G Y N + K R+ G LE YA D+
Sbjct: 249 ISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFA 308
Query: 484 ----------------LGRAGRLEEAYDFISNM---GIQPTGSVWSTLLAACRAHKSVEL 524
G+ R +++ +F++ M G QP ++L AC VE
Sbjct: 309 EMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVET 368
Query: 525 AEKVVDKILLVDPE-NMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLK 572
++ I P+ ++ A+ M + YS + +++A M+ + LK
Sbjct: 369 GRRIFSSI----PQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLK 413
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 26/174 (14%)
Query: 145 DLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSW 204
D + AL +MYCK EIDS R+ FD + ++ V W
Sbjct: 553 DSFVETALTDMYCKCG------------------------EIDSARQFFDAVLRKNTVIW 588
Query: 205 NTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIR 264
N +I G NG EA+ + R+M KPD T S+L + V G+EI R
Sbjct: 589 NEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQR 648
Query: 265 -HGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR-DAISWNSIIAGCVQNG 316
HG + ++ ++D + R+E + + PY+ ++ W +++ C +G
Sbjct: 649 IHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHG 702
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 281 bits (720), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 149/410 (36%), Positives = 230/410 (56%), Gaps = 3/410 (0%)
Query: 193 FDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDV 252
F + R + + G G +EA+ ++ G L+ + T + +L + +
Sbjct: 68 FQVENQRKTEKLDKTLKGLCVTGRLKEAVGLLWSSG---LQVEPETYAVLLQECKQRKEY 124
Query: 253 VKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGC 312
KG IH GF + ++ L+ +YA ++ + F L RD I WN++I+G
Sbjct: 125 TKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGY 184
Query: 313 VQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNK 372
VQ G +G+ + M + ++ P Q +F+SV AC+ L L GK+ H +I+ N
Sbjct: 185 VQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNI 244
Query: 373 FIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLED 432
+ S+LVDMY KC + +FD++ TR+++ WT++I G HG + + FEKM E+
Sbjct: 245 IVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEE 304
Query: 433 GVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEE 492
G RP V F+ VLTAC+H GLVD+GW++F SM++D+ I P +HYAA+ D LGRAGRL+E
Sbjct: 305 GCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQE 364
Query: 493 AYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSA 552
AY+F+ + VW +LL ACR H +V+L E K L +DP N G YV+ +N Y++
Sbjct: 365 AYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYAS 424
Query: 553 AKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKI 602
+ A+K+R M + G+KK P S IE+ +VH F+ D SH +KI
Sbjct: 425 CGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKI 474
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 129/280 (46%), Gaps = 11/280 (3%)
Query: 192 VFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVD 251
+F + RD++ WN +I+G Q G+ +E L + +M +++ PD +T +S+ +
Sbjct: 165 LFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDR 224
Query: 252 VVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAG 311
+ G H I+ ++ + S+L+DMY KC+ R F L R+ I+W S+I+G
Sbjct: 225 LEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISG 284
Query: 312 CVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIR-LGFDD 370
+GK + + F +M + +P V+F V+ AC H ++ G + + R G +
Sbjct: 285 YGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEP 344
Query: 371 NKFIASSLVDMYAKCGNIKMARYIFDKIETRDM-VAWTAIIMGCAMHGHA----LDAVSL 425
+++VD + G ++ A K ++ W +++ C +HG+ L A
Sbjct: 345 EGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKF 404
Query: 426 FEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSME 465
E +G YV F +C GL + K ME
Sbjct: 405 LELDPTNGGN--YVVFANGYASC---GLREAASKVRRKME 439
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 147/458 (32%), Positives = 260/458 (56%), Gaps = 36/458 (7%)
Query: 193 FDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDV 252
F LM +D++SWN ++ A + + L+++ + ++ + DS T+ S+L +
Sbjct: 389 FSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGI 448
Query: 253 VKGMEIHGYAIRHGF---DGDVFIGSSLIDMYAKCNRVEHSLRAFY-LLPYRDAISWNSI 308
K E+HGY+++ G + + +G++L+D YAKC VE++ + F L R +S+NS+
Sbjct: 449 GKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSL 508
Query: 309 IAGCVQNGKFD-------------------------------QGIGFFRQMLKAKVKPMQ 337
++G V +G D + IG FR++ ++P
Sbjct: 509 LSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNT 568
Query: 338 VSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDK 397
V+ +++P CA L +L+L +Q HG IIR G D + + +L+D+YAKCG++K A +F
Sbjct: 569 VTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIR-LKGTLLDVYAKCGSLKHAYSVFQS 627
Query: 398 IETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG 457
RD+V +TA++ G A+HG +A+ ++ M E ++P +V +LTAC HAGL+ +G
Sbjct: 628 DARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDG 687
Query: 458 WKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACR 517
+ ++S+ + P +E YA DL+ R GRL++AY F++ M ++P ++W TLL AC
Sbjct: 688 LQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACT 747
Query: 518 AHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPAC 577
+ ++L V + +L + ++ G +VL+SN+Y+A +W+ +LR M+ K +KK C
Sbjct: 748 TYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGC 807
Query: 578 SWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEK 615
SW+E+ + + F++GD SHP D I + +N L QM++
Sbjct: 808 SWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMKE 845
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 163/341 (47%), Gaps = 10/341 (2%)
Query: 183 KCE-IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMG-DDKLKPDSFTLS 240
KC +D +K+F M + D V WN V+ G + + RE + + M D+ KP S T +
Sbjct: 68 KCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVS-CGRETMRFFKAMHFADEPKPSSVTFA 126
Query: 241 SILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRV-EHSLRAFYLLPY 299
+LP+ D G +H Y I+ G + D +G++L+ MYAK + + AF +
Sbjct: 127 IVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIAD 186
Query: 300 RDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHL---TALNLG 356
+D +SWN+IIAG +N F MLK +P + ++V+P CA + A G
Sbjct: 187 KDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSG 246
Query: 357 KQLHGCII-RLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAM 415
+Q+H ++ R + F+ +SLV Y + G I+ A +F ++ ++D+V+W +I G A
Sbjct: 247 RQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYAS 306
Query: 416 HGHALDAVSLFEKMLEDG-VRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGL 474
+ A LF ++ G V P V +++L C+ + G + + + + +
Sbjct: 307 NCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDT 366
Query: 475 EHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAA 515
A+ R G AY S M + S W+ +L A
Sbjct: 367 SVGNALISFYARFGDTSAAYWAFSLMSTKDIIS-WNAILDA 406
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 211/443 (47%), Gaps = 40/443 (9%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
GL+ D NAL++MY K GF +F + FD + +D
Sbjct: 152 GLEKDTLVGNALVSMYAKF----GF-----IFPD--------------AYTAFDGIADKD 188
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFA---EHVDVVKGME 257
VVSWN +IAG ++N M +A M + +P+ T++++LP+ A +++ G +
Sbjct: 189 VVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQ 248
Query: 258 IHGYAI-RHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNG 316
IH Y + R VF+ +SL+ Y + R+E + F + +D +SWN +IAG N
Sbjct: 249 IHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNC 308
Query: 317 KFDQGIGFFRQML-KAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFD-DNKFI 374
++ + F ++ K V P V+ S++P CA LT L GK++H I+R + ++ +
Sbjct: 309 EWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSV 368
Query: 375 ASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGV 434
++L+ YA+ G+ A + F + T+D+++W AI+ A ++L +L + +
Sbjct: 369 GNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAI 428
Query: 435 RPCYVAFMAVLTACSHA---GLVDE--GWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGR 489
V +++L C + G V E G+ + D P L + A+ D + G
Sbjct: 429 TLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHD-EEEPKLGN--ALLDAYAKCGN 485
Query: 490 LEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNI 549
+E A+ + + T +++LL+ S + A+ + ++ D + + LM I
Sbjct: 486 VEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTD---LTTWSLMVRI 542
Query: 550 YSAAKRWKDAAKLRIHMRSKGLK 572
Y+ + +A + ++++G++
Sbjct: 543 YAESCCPNEAIGVFREIQARGMR 565
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 168/374 (44%), Gaps = 47/374 (12%)
Query: 251 DVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIA 310
D+ G +HG + G + S+++MYAKC R++ + F + D + WN ++
Sbjct: 36 DLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLT 95
Query: 311 G-CVQNGKFDQGIGFFRQM-LKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGF 368
G V G+ + + FF+ M + KP V+F+ V+P C L GK +H II+ G
Sbjct: 96 GLSVSCGR--ETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGL 153
Query: 369 DDNKFIASSLVDMYAKCGNIKMARYI-FDKIETRDMVAWTAIIMGCAMHGHALDAVSLFE 427
+ + + ++LV MYAK G I Y FD I +D+V+W AII G + + DA F
Sbjct: 154 EKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFC 213
Query: 428 KMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVAD----- 482
ML++ P Y VL C+ SM+K+ G + ++ V
Sbjct: 214 LMLKEPTEPNYATIANVLPVCA-------------SMDKNIACRSGRQIHSYVVQRSWLQ 260
Query: 483 -----------LLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAA----CRAHKSVELAEK 527
R GR+EEA + MG + S W+ ++A C K+ +L
Sbjct: 261 THVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVS-WNVVIAGYASNCEWFKAFQLFHN 319
Query: 528 VVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVH 587
+V K V P+++ ++S + A+ A+ IH S L+ + +GN +
Sbjct: 320 LVHK-GDVSPDSV---TIISILPVCAQLTDLASGKEIH--SYILRHSYLLEDTSVGNALI 373
Query: 588 TFLA--GDKSHPYY 599
+F A GD S Y+
Sbjct: 374 SFYARFGDTSAAYW 387
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 133/281 (47%), Gaps = 17/281 (6%)
Query: 149 ANALMNMYCKVQNLGGFGSANKVFDENPQR-----------GKGCKCEIDSVRKVFDLMP 197
NAL++ Y K N+ A+K+F +R G D + +F M
Sbjct: 473 GNALLDAYAKCGNVE---YAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMS 529
Query: 198 ARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGME 257
D+ +W+ ++ A++ EA+ + RE+ ++P++ T+ ++LP+ A+ + +
Sbjct: 530 TTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQ 589
Query: 258 IHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGK 317
HGY IR G GD+ + +L+D+YAKC ++H+ F RD + + +++AG +G+
Sbjct: 590 CHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGR 648
Query: 318 FDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRL-GFDDNKFIAS 376
+ + + M ++ +KP V ++++ AC H + G Q++ I + G +
Sbjct: 649 GKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYA 708
Query: 377 SLVDMYAKCGNIKMARYIFDKIETR-DMVAWTAIIMGCAMH 416
VD+ A+ G + A ++ + W ++ C +
Sbjct: 709 CAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTY 749
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Query: 340 FSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIE 399
F V+ ACA ++ L G+ LHGC+ +LG ++ S+++MYAKC + + +F +++
Sbjct: 24 FLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMD 83
Query: 400 TRDMVAWTAIIMGCAMHGHALDAVSLFEKM-LEDGVRPCYVAFMAVLTACSHAGLVDEGW 458
+ D V W ++ G ++ + + F+ M D +P V F VL C V G
Sbjct: 84 SLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSSVTFAIVLPLC-----VRLGD 137
Query: 459 KYFNSMEKDFRIAPGLEHYAAVADLL 484
Y + I GLE V + L
Sbjct: 138 SYNGKSMHSYIIKAGLEKDTLVGNAL 163
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 279 bits (714), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 159/470 (33%), Positives = 248/470 (52%), Gaps = 54/470 (11%)
Query: 152 LMNMYCKVQNLGGFGSANKVFDENPQR----------GKGCKCEIDSVRKVFDLMPARDV 201
L M C +G SANKVF E ++ G ++ S R+ FDL P RD+
Sbjct: 34 LFGMLCL---MGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDI 90
Query: 202 VSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGY 261
V WNT+I+G + G EA + +M P
Sbjct: 91 VLWNTMISGYIEMGNMLEARSLFDQM----------------PC---------------- 118
Query: 262 AIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQG 321
DV +++++ YA +E R F +P R+ SWN +I G QNG+ +
Sbjct: 119 -------RDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEV 171
Query: 322 IGFFRQML-KAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDD-NKFIASSLV 379
+G F++M+ + V P + + V+ ACA L A + GK +H LG++ + + ++L+
Sbjct: 172 LGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALI 231
Query: 380 DMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYV 439
DMY KCG I++A +F I+ RD+++W +I G A HGH +A++LF +M G+ P V
Sbjct: 232 DMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKV 291
Query: 440 AFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISN 499
F+ VL AC H GLV++G YFNSM DF I P +EH V DLL RAG L +A +FI+
Sbjct: 292 TFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINK 351
Query: 500 MGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDA 559
M ++ +W+TLL A + +K V++ E +++++ ++P N +V++SNIY A R+ DA
Sbjct: 352 MPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDA 411
Query: 560 AKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNIL 609
A+L++ MR G KK SWIE + + F + + HP +++ L L
Sbjct: 412 ARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILREL 461
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 136/284 (47%), Gaps = 25/284 (8%)
Query: 145 DLYTANALMNMYCKVQNLGGFGSANKVFDENPQR----------GKGCKCEIDSVRKVFD 194
D+ N +++ Y + +G A +FD+ P R G ++++ +VFD
Sbjct: 89 DIVLWNTMISGYIE---MGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFD 145
Query: 195 LMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDD-KLKPDSFTLSSILPIFAEHVDVV 253
MP R+V SWN +I G AQNG E L + M D+ + P+ T++ +L A+
Sbjct: 146 DMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFD 205
Query: 254 KGMEIHGYAIRHGFDG-DVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGC 312
G +H Y G++ DV + ++LIDMY KC +E ++ F + RD ISWN++I G
Sbjct: 206 FGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGL 265
Query: 313 VQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNK 372
+G + + F +M + + P +V+F V+ AC H+ + G + F D
Sbjct: 266 AAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSM----FTDFS 321
Query: 373 FIAS-----SLVDMYAKCGNIKMARYIFDKIETR-DMVAWTAII 410
+ +VD+ ++ G + A +K+ + D V W ++
Sbjct: 322 IMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLL 365
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 279 bits (713), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 156/463 (33%), Positives = 259/463 (55%), Gaps = 41/463 (8%)
Query: 198 ARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGME 257
+ VSW + I +NG EA +M ++P+ T ++L D G E
Sbjct: 33 SETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCG---DFTSGSE 89
Query: 258 -----IHGYAIRHGFDGD-VFIGSSLIDMYAKCNR------------------------- 286
+HGYA + G D + V +G+++I MY+K R
Sbjct: 90 ALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDG 149
Query: 287 ------VEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSF 340
V+++ + F +P RD ISW ++I G V+ G ++ + +FR+M + VKP V+
Sbjct: 150 YMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAI 209
Query: 341 SSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIET 400
+ + AC +L AL+ G +H ++ F +N +++SL+D+Y +CG ++ AR +F +E
Sbjct: 210 IAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEK 269
Query: 401 RDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKY 460
R +V+W ++I+G A +G+A +++ F KM E G +P V F LTACSH GLV+EG +Y
Sbjct: 270 RTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRY 329
Query: 461 FNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAH- 519
F M+ D+RI+P +EHY + DL RAGRLE+A + +M ++P V +LLAAC H
Sbjct: 330 FQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHG 389
Query: 520 KSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSW 579
++ LAE+++ + ++ ++ YV++SN+Y+A +W+ A+K+R M+ GLKK P S
Sbjct: 390 NNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSS 449
Query: 580 IEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDT 622
IEI + +H F+AGD +H I E L ++ + +G V++T
Sbjct: 450 IEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 147/307 (47%), Gaps = 20/307 (6%)
Query: 141 GLDFD-LYTANALMNMYCKVQNLGGFGSANKVFDENPQR----------GKGCKCEIDSV 189
GLD + + A++ MY K G F A VFD + G ++D+
Sbjct: 103 GLDRNHVMVGTAIIGMYSK---RGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNA 159
Query: 190 RKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEH 249
K+FD MP RD++SW +I G + G EAL REM +KPD + + L
Sbjct: 160 AKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNL 219
Query: 250 VDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSII 309
+ G+ +H Y + F +V + +SLID+Y +C VE + + FY + R +SWNS+I
Sbjct: 220 GALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVI 279
Query: 310 AGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGK---QLHGCIIRL 366
G NG + + +FR+M + KP V+F+ + AC+H+ + G Q+ C R+
Sbjct: 280 VGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRI 339
Query: 367 GFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR-DMVAWTAIIMGCAMHGHALDAVSL 425
+ LVD+Y++ G ++ A + + + + V +++ C+ HG+ +
Sbjct: 340 SPRIEHY--GCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAER 397
Query: 426 FEKMLED 432
K L D
Sbjct: 398 LMKHLTD 404
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 278 bits (712), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 227/386 (58%), Gaps = 2/386 (0%)
Query: 230 DKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEH 289
D D++ LSS + + D G H A++ GF DV++GSSL+ +Y VE+
Sbjct: 114 DGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVEN 173
Query: 290 SLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAH 349
+ + F +P R+ +SW ++I+G Q + D + + +M K+ P +F++++ AC
Sbjct: 174 AYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTG 233
Query: 350 LTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAI 409
AL G+ +H + +G I++SL+ MY KCG++K A IFD+ +D+V+W ++
Sbjct: 234 SGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSM 293
Query: 410 IMGCAMHGHALDAVSLFEKML-EDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDF 468
I G A HG A+ A+ LFE M+ + G +P + ++ VL++C HAGLV EG K+FN M +
Sbjct: 294 IAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLM-AEH 352
Query: 469 RIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKV 528
+ P L HY+ + DLLGR G L+EA + I NM ++P +W +LL +CR H V +
Sbjct: 353 GLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRA 412
Query: 529 VDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHT 588
++ L+++P+ +V ++N+Y++ WK+AA +R M+ KGLK P CSWIEI N V
Sbjct: 413 AEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFM 472
Query: 589 FLAGDKSHPYYDKINEALNILLEQME 614
F A D S+ +I L+ L++ ME
Sbjct: 473 FKAEDGSNCRMLEIVHVLHCLIDHME 498
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 121/248 (48%), Gaps = 2/248 (0%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP 244
E+++ KVF+ MP R+VVSW +I+G AQ L + +M P+ +T +++L
Sbjct: 170 EVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLS 229
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS 304
+ +G +H + G + I +SLI MY KC ++ + R F +D +S
Sbjct: 230 ACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVS 289
Query: 305 WNSIIAGCVQNGKFDQGIGFFRQML-KAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCI 363
WNS+IAG Q+G Q I F M+ K+ KP +++ V+ +C H + G++ +
Sbjct: 290 WNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLM 349
Query: 364 IRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR-DMVAWTAIIMGCAMHGHALDA 422
G S LVD+ + G ++ A + + + + + V W +++ C +HG
Sbjct: 350 AEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTG 409
Query: 423 VSLFEKML 430
+ E+ L
Sbjct: 410 IRAAEERL 417
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 28/224 (12%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
MR P + F +LL A T GL L+ +N+L++MYCK +
Sbjct: 212 MRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGD 271
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
L D+ R +FD +DVVSWN++IAG AQ+G+ +A+
Sbjct: 272 LK-----------------------DAFR-IFDQFSNKDVVSWNSMIAGYAQHGLAMQAI 307
Query: 222 DMVR-EMGDDKLKPDSFTLSSILPIFAEHVDVVK-GMEIHGYAIRHGFDGDVFIGSSLID 279
++ M KPD+ T +L H +VK G + HG ++ S L+D
Sbjct: 308 ELFELMMPKSGTKPDAITYLGVLSS-CRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVD 366
Query: 280 MYAKCNRVEHSLRAFYLLPYR-DAISWNSIIAGCVQNGKFDQGI 322
+ + ++ +L +P + +++ W S++ C +G GI
Sbjct: 367 LLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGI 410
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 278 bits (712), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 156/494 (31%), Positives = 264/494 (53%), Gaps = 45/494 (9%)
Query: 166 GSANKVFDENPQRGKGCKCEIDS-----VRKVFDLMPARDVVSWNTVIAGNAQNGMFREA 220
SAN + ++P IDS KVFD +P DV+S VI + EA
Sbjct: 18 SSANALVTKSPNSIPELVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEA 77
Query: 221 LDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDM 280
+ + ++P+ FT +++ DV G ++H YA++ G +VF+GS++++
Sbjct: 78 SQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNC 137
Query: 281 YAKCNRV-------------------------------EHSLRAFYLLPYRDAISWNSII 309
Y K + + E +L F +P R ++WN++I
Sbjct: 138 YVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVI 197
Query: 310 AGCVQNGKFDQGIGFFRQMLKAKVK-PMQVSFSSVIPACAHLTALNLGKQLHGCIIR-LG 367
G Q G+ ++ + F ML+ V P + +F I A +++ + GK +H C I+ LG
Sbjct: 198 GGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLG 257
Query: 368 FDDNKFIASSLVDMYAKCGNIKMARYIFDKIE--TRDMVAWTAIIMGCAMHGHALDAVSL 425
N F+ +SL+ Y+KCGN++ + F+K+E R++V+W ++I G A +G +AV++
Sbjct: 258 KRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAM 317
Query: 426 FEKMLED-GVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGL---EHYAAVA 481
FEKM++D +RP V + VL AC+HAGL+ EG+ YFN D+ P L EHYA +
Sbjct: 318 FEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMV 376
Query: 482 DLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMG 541
D+L R+GR +EA + I +M + P W LL C+ H + LA+ KIL +DP ++
Sbjct: 377 DMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVS 436
Query: 542 AYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDK 601
+YV++SN YSA + W++ + +R M+ GLK+ CSWIE+ +++ F+ DK++ D+
Sbjct: 437 SYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDE 496
Query: 602 INEALNILLEQMEK 615
+ L ++ + +E+
Sbjct: 497 VYRMLALVSQHLEE 510
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 156/350 (44%), Gaps = 30/350 (8%)
Query: 105 LGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGG 164
LGI P F +++ +ST GL +++ +A++N Y K+ L
Sbjct: 87 LGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLT- 145
Query: 165 FGSANKVFDE----------NPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQN 214
A + FD+ N G K E + +F MP R VV+WN VI G +Q
Sbjct: 146 --DARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQT 203
Query: 215 GMFREA----LDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRH-GFDG 269
G EA +DM+RE + P+ T + + G IH AI+ G
Sbjct: 204 GRNEEAVNTFVDMLRE---GVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRF 260
Query: 270 DVFIGSSLIDMYAKCNRVEHSLRAFYLL--PYRDAISWNSIIAGCVQNGKFDQGIGFFRQ 327
+VF+ +SLI Y+KC +E SL AF L R+ +SWNS+I G NG+ ++ + F +
Sbjct: 261 NVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEK 320
Query: 328 MLK-AKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIA----SSLVDMY 382
M+K ++P V+ V+ AC H + G + +DD + + +VDM
Sbjct: 321 MVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVN-DYDDPNLLELEHYACMVDML 379
Query: 383 AKCGNIKMARYIFDKIETRDMVA-WTAIIMGCAMHGHALDAVSLFEKMLE 431
++ G K A + + + W A++ GC +H + A K+LE
Sbjct: 380 SRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILE 429
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 277 bits (709), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 172/518 (33%), Positives = 261/518 (50%), Gaps = 29/518 (5%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
MR G+ P + F + L S G D D++ AL+ MY K
Sbjct: 236 MRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLK--- 292
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
C E S R V + +P +DVV W +I+G + G +AL
Sbjct: 293 --------------------CGKEEASYR-VLETIPNKDVVCWTVMISGLMRLGRAEKAL 331
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMY 281
+ EM S ++S++ A+ G +HGY +RHG+ D +SLI MY
Sbjct: 332 IVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMY 391
Query: 282 AKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFS 341
AKC ++ SL F + RD +SWN+II+G QN + + F +M K K SF+
Sbjct: 392 AKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEM-KFKTVQQVDSFT 450
Query: 342 --SVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIE 399
S++ AC+ AL +GK +H +IR + ++LVDMY+KCG ++ A+ FD I
Sbjct: 451 VVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSIS 510
Query: 400 TRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWK 459
+D+V+W +I G HG A+ ++ + L G+ P +V F+AVL++CSH G+V +G K
Sbjct: 511 WKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLK 570
Query: 460 YFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAH 519
F+SM +DF + P EH A V DLL RA R+E+A+ F +P+ V +L ACRA+
Sbjct: 571 IFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRAN 630
Query: 520 KSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSW 579
E+ + + + ++ + P + G YV + + ++A KRW D ++ MRS GLKK P S
Sbjct: 631 GKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSK 690
Query: 580 IEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEG 617
IE+ K TF SH D L +L +M + G
Sbjct: 691 IEMNGKTTTFFMNHTSHS--DDTVSLLKLLSREMMQFG 726
Score = 189 bits (479), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 210/435 (48%), Gaps = 30/435 (6%)
Query: 100 NAMRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKV 159
N MR GI P +LL+ + G D D+ N+++N+YCK
Sbjct: 136 NEMRFQGIKPGP---VTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKC 192
Query: 160 QNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFRE 219
++G + +FD M RD+VSWNT+I+G A G E
Sbjct: 193 DHVG------------------------DAKDLFDQMEQRDMVSWNTMISGYASVGNMSE 228
Query: 220 ALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLID 279
L ++ M D L+PD T + L + D+ G +H ++ GFD D+ + ++LI
Sbjct: 229 ILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALIT 288
Query: 280 MYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVS 339
MY KC + E S R +P +D + W +I+G ++ G+ ++ + F +ML++ +
Sbjct: 289 MYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEA 348
Query: 340 FSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIE 399
+SV+ +CA L + +LG +HG ++R G+ + +SL+ MYAKCG++ + IF+++
Sbjct: 349 IASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN 408
Query: 400 TRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPC-YVAFMAVLTACSHAGLVDEGW 458
RD+V+W AII G A + A+ LFE+M V+ +++L ACS AG + G
Sbjct: 409 ERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVG- 467
Query: 459 KYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRA 518
K + + I P A+ D+ + G LE A ++ + S W L+A
Sbjct: 468 KLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVS-WGILIAGYGF 526
Query: 519 HKSVELAEKVVDKIL 533
H ++A ++ + L
Sbjct: 527 HGKGDIALEIYSEFL 541
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 171/358 (47%), Gaps = 27/358 (7%)
Query: 100 NAMRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKV 159
++M A + P FPSLLKA G D Y +++L+N+Y K
Sbjct: 35 SSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAK- 93
Query: 160 QNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFRE 219
G A KVF+E M RDVV W +I ++ G+ E
Sbjct: 94 --FGLLAHARKVFEE---------------------MRERDVVHWTAMIGCYSRAGIVGE 130
Query: 220 ALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLID 279
A +V EM +KP TL L + + +++ + +H +A+ +GFD D+ + +S+++
Sbjct: 131 ACSLVNEMRFQGIKPGPVTL---LEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLN 187
Query: 280 MYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVS 339
+Y KC+ V + F + RD +SWN++I+G G + + +M ++P Q +
Sbjct: 188 LYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQT 247
Query: 340 FSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIE 399
F + + + L +G+ LH I++ GFD + + ++L+ MY KCG + + + + I
Sbjct: 248 FGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIP 307
Query: 400 TRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG 457
+D+V WT +I G G A A+ +F +ML+ G A +V+ +C+ G D G
Sbjct: 308 NKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLG 365
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 125/243 (51%), Gaps = 3/243 (1%)
Query: 204 WNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAI 263
+N+ I + +G ++ L M +KL PD+FT S+L A + G+ IH +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 264 RHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIG 323
+GF D +I SSL+++YAK + H+ + F + RD + W ++I + G +
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 324 FFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYA 383
+M +KP V+ ++ +T L LH + GFD + + +S++++Y
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMNSMLNLYC 190
Query: 384 KCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMA 443
KC ++ A+ +FD++E RDMV+W +I G A G+ + + L +M DG+RP F A
Sbjct: 191 KCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGA 250
Query: 444 VLT 446
L+
Sbjct: 251 SLS 253
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 174/587 (29%), Positives = 274/587 (46%), Gaps = 101/587 (17%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
MR G+ PTR + L AS G++ D +L+N YCKV
Sbjct: 265 MRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKV-- 322
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
G I+ VFD M +DVV+WN +I+G Q G+ +A+
Sbjct: 323 --GL--------------------IEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAI 360
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSS----- 276
M + M +KLK D TL++++ A ++ G E+ Y IRH F+ D+ + S+
Sbjct: 361 YMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMY 420
Query: 277 --------------------------LIDMYAKCNRVEHSLRAFY--------------- 295
L+ YA+ +LR FY
Sbjct: 421 AKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWN 480
Query: 296 --------------------------LLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQML 329
++P + ISW +++ G VQNG ++ I F R+M
Sbjct: 481 LIILSLLRNGQVDEAKDMFLQMQSSGIIP--NLISWTTMMNGMVQNGCSEEAILFLRKMQ 538
Query: 330 KAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIR-LGFDDNKFIASSLVDMYAKCGNI 388
++ ++P S + + ACAHL +L++G+ +HG IIR L I +SLVDMYAKCG+I
Sbjct: 539 ESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDI 598
Query: 389 KMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTAC 448
A +F ++ A+I A++G+ +A++L+ + G++P + VL+AC
Sbjct: 599 NKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSAC 658
Query: 449 SHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSV 508
+HAG +++ + F + + P LEHY + DLL AG E+A I M +P +
Sbjct: 659 NHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARM 718
Query: 509 WSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRS 568
+L+A+C + EL + + K+L +PEN G YV +SN Y+ W + K+R M++
Sbjct: 719 IQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKA 778
Query: 569 KGLKKTPACSWIEIGNK--VHTFLAGDKSHPYYDKINEALNILLEQM 613
KGLKK P CSWI+I + VH F+A DK+H ++I L +LL M
Sbjct: 779 KGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLLYDM 825
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 182/350 (52%), Gaps = 5/350 (1%)
Query: 183 KCEI-DSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
KC + D KVFD +P R+ V+WN ++ G QNG EA+ + +M ++P T+S+
Sbjct: 220 KCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVST 279
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
L A V +G + H AI +G + D +G+SL++ Y K +E++ F + +D
Sbjct: 280 CLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKD 339
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
++WN II+G VQ G + I + M K+K V+ ++++ A A L LGK++
Sbjct: 340 VVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQC 399
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALD 421
IR F+ + +AS+++DMYAKCG+I A+ +FD +D++ W ++ A G + +
Sbjct: 400 YCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGE 459
Query: 422 AVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVA 481
A+ LF M +GV P + + ++ + G VDE F M+ I P L + +
Sbjct: 460 ALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GIIPNLISWTTMM 518
Query: 482 DLLGRAGRLEEAYDFISNM---GIQPTGSVWSTLLAACRAHKSVELAEKV 528
+ + + G EEA F+ M G++P + L+AC S+ + +
Sbjct: 519 NGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTI 568
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 177/343 (51%), Gaps = 21/343 (6%)
Query: 183 KCEIDSVRKV-FDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
KC+ + +V F + R+V SW +I + G+ AL EM ++++ PD+F
Sbjct: 119 KCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNF---- 174
Query: 242 ILPIFAEHVDVVK----GMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLL 297
++P + +K G +HGY ++ G + VF+ SSL DMY KC ++ + + F +
Sbjct: 175 VVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEI 234
Query: 298 PYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGK 357
P R+A++WN+++ G VQNGK ++ I F M K V+P +V+ S+ + A A++ + GK
Sbjct: 235 PDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGK 294
Query: 358 QLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHG 417
Q H I G + + + +SL++ Y K G I+ A +FD++ +D+V W II G G
Sbjct: 295 QSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQG 354
Query: 418 HALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG-----WKYFNSMEKDFRIAP 472
DA+ + + M + ++ V +++A + + G + +S E D +A
Sbjct: 355 LVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLA- 413
Query: 473 GLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAA 515
+ V D+ + G + +A + ++ +W+TLLAA
Sbjct: 414 -----STVMDMYAKCGSIVDAKKVFDST-VEKDLILWNTLLAA 450
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 138/272 (50%), Gaps = 7/272 (2%)
Query: 213 QNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHG--FDGD 270
+NG +EAL +V EM L+ IL D+ G +IH +++G + +
Sbjct: 47 KNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARN 106
Query: 271 VFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLK 330
+I + L+ YAKC+ +E + F L R+ SW +II + G + + F +ML+
Sbjct: 107 EYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLE 166
Query: 331 AKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKM 390
++ P +V AC L G+ +HG +++ G +D F+ASSL DMY KCG +
Sbjct: 167 NEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDD 226
Query: 391 ARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSH 450
A +FD+I R+ VAW A+++G +G +A+ LF M + GV P V L+A ++
Sbjct: 227 ASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASAN 286
Query: 451 AGLVDEGWK-----YFNSMEKDFRIAPGLEHY 477
G V+EG + N ME D + L ++
Sbjct: 287 MGGVEEGKQSHAIAIVNGMELDNILGTSLLNF 318
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 275 bits (702), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 146/427 (34%), Positives = 235/427 (55%), Gaps = 32/427 (7%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
++ R +FD R V+ WN++I+G N M EAL + EM ++ + DS TL++++
Sbjct: 269 VNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNET-REDSRTLAAVINA 327
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCN-------------------- 285
+ G ++H +A + G D+ + S+L+DMY+KC
Sbjct: 328 CIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILL 387
Query: 286 -----------RVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVK 334
R++ + R F + + ISWNS+ G QNG + + +F QM K +
Sbjct: 388 NSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLP 447
Query: 335 PMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYI 394
+VS SSVI ACA +++L LG+Q+ +G D ++ ++SSL+D+Y KCG ++ R +
Sbjct: 448 TDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRV 507
Query: 395 FDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLV 454
FD + D V W ++I G A +G +A+ LF+KM G+RP + FM VLTAC++ GLV
Sbjct: 508 FDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLV 567
Query: 455 DEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLA 514
+EG K F SM+ D P EH++ + DLL RAG +EEA + + M GS+WS++L
Sbjct: 568 EEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILR 627
Query: 515 ACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKT 574
C A+ + +K +KI+ ++PEN AYV +S I++ + W+ +A +R MR + K
Sbjct: 628 GCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKN 687
Query: 575 PACSWIE 581
P SW +
Sbjct: 688 PGSSWTD 694
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 152/303 (50%), Gaps = 15/303 (4%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDE---------NPQRGKGCKC-EIDSVR 190
GL D+ A+ L++MY K G A K+F E N C ID +
Sbjct: 348 GLIDDIVVASTLLDMYSKC---GSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAK 404
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHV 250
+VF+ + + ++SWN++ G +QNG E L+ +M L D +LSS++ A
Sbjct: 405 RVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASIS 464
Query: 251 DVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIA 310
+ G ++ A G D D + SSLID+Y KC VEH R F + D + WNS+I+
Sbjct: 465 SLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMIS 524
Query: 311 GCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCI-IRLGFD 369
G NG+ + I F++M A ++P Q++F V+ AC + + G++L + + GF
Sbjct: 525 GYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFV 584
Query: 370 DNKFIASSLVDMYAKCGNIKMARYIFDKIE-TRDMVAWTAIIMGCAMHGHALDAVSLFEK 428
+K S +VD+ A+ G ++ A + +++ D W++I+ GC +G+ EK
Sbjct: 585 PDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEK 644
Query: 429 MLE 431
++E
Sbjct: 645 IIE 647
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 118/495 (23%), Positives = 213/495 (43%), Gaps = 112/495 (22%)
Query: 143 DFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQR----------GKGCKCEIDSVRKV 192
D + ++ N ++ Y N G G++ + FD P+R G E+ R++
Sbjct: 90 DRNYFSWNTMIEGY---MNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRL 146
Query: 193 FDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDV 252
F+ MP +DVV+ N+++ G NG EAL + +E+ D+ TL+++L AE +
Sbjct: 147 FNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEAL 203
Query: 253 VKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRV--------------EHSLRA----- 293
G +IH + G + D + SSL+++YAKC + +HSL A
Sbjct: 204 KCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGY 263
Query: 294 ------------FYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFS 341
F R I WNS+I+G + N + + F +M + + + + +
Sbjct: 264 ANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLA 322
Query: 342 SVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGN-------------- 387
+VI AC L L GKQ+H + G D+ +AS+L+DMY+KCG+
Sbjct: 323 AVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESY 382
Query: 388 -----------------IKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKML 430
I A+ +F++IE + +++W ++ G + +G ++ + F +M
Sbjct: 383 DTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMH 442
Query: 431 EDGVRPCYVAFMAVLTACSHAGLVDEGWKYFN-----SMEKDFRIAPGL----------E 475
+ + V+ +V++AC+ ++ G + F ++ D ++ L E
Sbjct: 443 KLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVE 502
Query: 476 HYAAVADLLGRA---------------GRLEEAYDFISNM---GIQPTGSVWSTLLAACR 517
H V D + ++ G+ EA D M GI+PT + +L AC
Sbjct: 503 HGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACN 562
Query: 518 AHKSVELAEKVVDKI 532
VE K+ + +
Sbjct: 563 YCGLVEEGRKLFESM 577
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 14/195 (7%)
Query: 343 VIPACAHLTALNLGKQLHGCIIRLGFDDNKFI-ASSLVDMYAKCGNIKMARYIFDKIETR 401
++ +C+ L +Q +G +++ GF + I A+ L+ MY++ G + +AR +FD++ R
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 402 DMVAWTAIIMGCAMHGHALDAVSLFEKMLE-DGVRPCYVAFMAVLTACSHAGLVDEGWKY 460
+ +W +I G G ++ F+ M E DG ++ V++ + AG + +
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDG-----YSWNVVVSGFAKAGELSVARRL 146
Query: 461 FNSM-EKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAH 519
FN+M EKD L H + G EEA + +T+L AC
Sbjct: 147 FNAMPEKDVVTLNSLLHGYIL------NGYAEEALRLFKELNFSADAITLTTVLKACAEL 200
Query: 520 KSVELAEKVVDKILL 534
++++ +++ +IL+
Sbjct: 201 EALKCGKQIHAQILI 215
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/526 (32%), Positives = 272/526 (51%), Gaps = 60/526 (11%)
Query: 107 ISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGFG 166
+P F +L K+ + G D+Y + +++MY K G G
Sbjct: 74 FAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAK---FGKMG 130
Query: 167 SANKVFDENPQRGKGC---------KC-EIDSVRKVFDLMP-ARDVVSWNTVIAGNAQNG 215
A FDE P R + +C E+D K+FD MP +DVV +N ++ G ++G
Sbjct: 131 CARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSG 190
Query: 216 MFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGS 275
A R + D+ T +++ IHGY
Sbjct: 191 DMTSA----RRLFDEMTHKTVITWTTM---------------IHGY-------------- 217
Query: 276 SLIDMYAKCN--RVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQM-LKAK 332
CN ++ + + F +P R+ +SWN++I G QN + +GI F++M
Sbjct: 218 --------CNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTS 269
Query: 333 VKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMAR 392
+ P V+ SV+PA + AL+LG+ H + R D + ++++DMY+KCG I+ A+
Sbjct: 270 LDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAK 329
Query: 393 YIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAG 452
IFD++ + + +W A+I G A++G+A A+ LF M+ + +P + +AV+TAC+H G
Sbjct: 330 RIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGG 388
Query: 453 LVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTL 512
LV+EG K+F+ M ++ + +EHY + DLLGRAG L+EA D I+NM +P G + S+
Sbjct: 389 LVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSF 447
Query: 513 LAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLK 572
L+AC +K +E AE+++ K + ++P+N G YVL+ N+Y+A KRW D ++ MR K
Sbjct: 448 LSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAK 507
Query: 573 KTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGY 618
K CS IEI V F++GD +HP+ I+ L LL M +E Y
Sbjct: 508 KEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKY 553
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 161/354 (45%), Gaps = 35/354 (9%)
Query: 164 GFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDM 223
G G A K+FD+ PQR D N++I + + ++ +
Sbjct: 25 GIGYARKLFDQRPQRD--------------------DSFLSNSMIKAYLETRQYPDSFAL 64
Query: 224 VREMGDDK-LKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYA 282
R++ + PD+FT +++ + + V +G+++H R GF D+++ + ++DMYA
Sbjct: 65 YRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYA 124
Query: 283 KCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAK-VKPMQVSFS 341
K ++ + AF +P+R +SW ++I+G ++ G+ D F QM K V
Sbjct: 125 KFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMD 184
Query: 342 SVIPACAHLTALNLGKQL-HGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIET 400
+ + +A L ++ H +I ++++ Y +I AR +FD +
Sbjct: 185 GFVKSGDMTSARRLFDEMTHKTVITW---------TTMIHGYCNIKDIDAARKLFDAMPE 235
Query: 401 RDMVAWTAIIMGCAMHGHALDAVSLFEKM-LEDGVRPCYVAFMAVLTACSHAGLVDEGWK 459
R++V+W +I G + + + LF++M + P V ++VL A S G + G +
Sbjct: 236 RNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLG-E 294
Query: 460 YFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLL 513
+ + + ++ ++ A+ D+ + G +E+A M + S W+ ++
Sbjct: 295 WCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVAS-WNAMI 347
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 271 bits (694), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 161/474 (33%), Positives = 254/474 (53%), Gaps = 65/474 (13%)
Query: 142 LDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDV 201
L+FDL+ N+LM+MY K LG G A + VF +M +D
Sbjct: 306 LEFDLFLGNSLMSMYSK---LGYMGEA---------------------KAVFGVMKNKDS 341
Query: 202 VSWNTVIAGNAQNGMFREALDMVREM-GDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
VSWN++I G Q EA ++ +M G D + S+T D++KG
Sbjct: 342 VSWNSLITGLVQRKQISEAYELFEKMPGKDMV---SWT------------DMIKG----- 381
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQ 320
F G I +KC + F ++P +D I+W ++I+ V NG +++
Sbjct: 382 -----------FSGKGEI---SKC------VELFGMMPEKDNITWTAMISAFVSNGYYEE 421
Query: 321 GIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVD 380
+ +F +ML+ +V P +FSSV+ A A L L G Q+HG ++++ ++ + +SLV
Sbjct: 422 ALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVS 481
Query: 381 MYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVA 440
MY KCGN A IF I ++V++ +I G + +G A+ LF + G P V
Sbjct: 482 MYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVT 541
Query: 441 FMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM 500
F+A+L+AC H G VD GWKYF SM+ + I PG +HYA + DLLGR+G L++A + IS M
Sbjct: 542 FLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTM 601
Query: 501 GIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAA 560
+P VW +LL+A + H V+LAE K++ ++P++ YV++S +YS + +D
Sbjct: 602 PCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCD 661
Query: 561 KLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQME 614
++ +SK +KK P SWI + +VH FLAGD+S ++I L ++ ++ME
Sbjct: 662 RIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFTLKMIRKEME 715
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 132/285 (46%), Gaps = 30/285 (10%)
Query: 163 GGFGSANKVFDENPQRGKGC-----------KCEIDSVRKVFDLMPARDVVSWNTVIAGN 211
G A +VFDE P R KC++ ++F +P ++ VS+ T+I G
Sbjct: 95 GKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGF 154
Query: 212 AQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFA------EHVDVVKGMEIHGYAIRH 265
+ G F EA + E K + DS + +L + E V V +GM +
Sbjct: 155 VRAGRFDEAEFLYAET-PVKFR-DSVASNVLLSGYLRAGKWNEAVRVFQGMAVK------ 206
Query: 266 GFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFF 325
+V SS++ Y K R+ + F + R+ I+W ++I G + G F+ G G F
Sbjct: 207 ----EVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLF 262
Query: 326 RQMLK-AKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAK 384
+M + VK + + + AC G Q+HG + R+ + + F+ +SL+ MY+K
Sbjct: 263 LRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSK 322
Query: 385 CGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM 429
G + A+ +F ++ +D V+W ++I G +A LFEKM
Sbjct: 323 LGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM 367
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 153/335 (45%), Gaps = 28/335 (8%)
Query: 205 NTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG-YAI 263
N+ I+ +A+NG +EA + R+M + + + +++ +AE+ + K ++ +
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSI----VSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 264 RHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIG 323
R + I + + + KC+ + + F +P ++A+S+ ++I G V+ G+FD+
Sbjct: 110 RVTTSYNAMITAMIKN---KCD-LGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEA-- 163
Query: 324 FFRQMLKAKVKPMQVSFSSVIPACAHLTA-LNLGKQLHGCIIRLGFDDNKFIA-SSLVDM 381
+ L A+ V F + + L+ L GK + G + ++ SS+V
Sbjct: 164 ---EFLYAETP---VKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHG 217
Query: 382 YAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDG-VRPCYVA 440
Y K G I AR +FD++ R+++ WTA+I G G D LF +M ++G V+
Sbjct: 218 YCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNT 277
Query: 441 FMAVLTACSHAGLVDEGWK---YFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFI 497
+ AC EG + + M +F + G ++ + + G + EA
Sbjct: 278 LAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLG----NSLMSMYSKLGYMGEAKAVF 333
Query: 498 SNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKI 532
M + + S W++L+ K + A ++ +K+
Sbjct: 334 GVMKNKDSVS-WNSLITGLVQRKQISEAYELFEKM 367
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 100/229 (43%), Gaps = 42/229 (18%)
Query: 271 VFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLK 330
+F +S I +A+ ++ + F + R +SW ++I+ +NGK + F +M
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEM-- 107
Query: 331 AKVKPMQV--SFSSVIPA-----------------CAHLTALNLGKQLHGCIIRLGFDDN 371
P++V S++++I A A++ + G + FD+
Sbjct: 108 ----PVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEA 163
Query: 372 KFI-------------ASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGH 418
+F+ ++ L+ Y + G A +F + +++V+ ++++ G G
Sbjct: 164 EFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGR 223
Query: 419 ALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKD 467
+DA SLF++M E V + + A++ AG ++G+ F M ++
Sbjct: 224 IVDARSLFDRMTERNV----ITWTAMIDGYFKAGFFEDGFGLFLRMRQE 268
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 269 bits (688), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 153/467 (32%), Positives = 248/467 (53%), Gaps = 34/467 (7%)
Query: 190 RKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEH 249
RK+FD +N +I + E++ + + D L+P T + I A
Sbjct: 36 RKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASF 95
Query: 250 VDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAK-----CNR------------------ 286
+H R GF+ D F ++LI YAK C R
Sbjct: 96 SSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMI 155
Query: 287 --------VEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAK-VKPMQ 337
++ ++ F +P ++ SW ++I+G QNG + + + F M K K VKP
Sbjct: 156 TGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNH 215
Query: 338 VSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDK 397
++ SV+PACA+L L +G++L G GF DN ++ ++ ++MY+KCG I +A+ +F++
Sbjct: 216 ITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEE 275
Query: 398 I-ETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDE 456
+ R++ +W ++I A HG +A++LF +ML +G +P V F+ +L AC H G+V +
Sbjct: 276 LGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVK 335
Query: 457 GWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAAC 516
G + F SME+ +I+P LEHY + DLLGR G+L+EAYD I M ++P VW TLL AC
Sbjct: 336 GQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGAC 395
Query: 517 RAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPA 576
H +VE+AE + + ++P N G V+MSNIY+A ++W ++R M+ + + K
Sbjct: 396 SFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAG 455
Query: 577 CSW-IEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDT 622
S+ +E+G VH F DKSHP +I + L + +M+ E D+
Sbjct: 456 YSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMKLEKSRFDS 502
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 161/330 (48%), Gaps = 23/330 (6%)
Query: 106 GISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGF 165
G+ P+ H F + AS G + D + L+ Y K LG
Sbjct: 77 GLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAK---LGAL 133
Query: 166 GSANKVFDENPQR----------GKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNG 215
A +VFDE +R G + ++ + ++FD MP ++V SW TVI+G +QNG
Sbjct: 134 CCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNG 193
Query: 216 MFREALDMVREMGDDK-LKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIG 274
+ EAL M M DK +KP+ T+ S+LP A ++ G + GYA +GF ++++
Sbjct: 194 NYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVC 253
Query: 275 SSLIDMYAKCNRVEHSLRAFYLL-PYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKV 333
++ I+MY+KC ++ + R F L R+ SWNS+I +GK D+ + F QML+
Sbjct: 254 NATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGE 313
Query: 334 KPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFI-ASSLVDMYAKCGNIKMAR 392
KP V+F ++ AC H + G++L + + K ++D+ + G ++ A
Sbjct: 314 KPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEA- 372
Query: 393 YIFDKIETR----DMVAWTAIIMGCAMHGH 418
+D I+T D V W ++ C+ HG+
Sbjct: 373 --YDLIKTMPMKPDAVVWGTLLGACSFHGN 400
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 157/499 (31%), Positives = 257/499 (51%), Gaps = 23/499 (4%)
Query: 106 GISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGF 165
G+S + +LKA + GL DL+ N L+ +Y K G
Sbjct: 116 GVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKC---GCL 172
Query: 166 GSANKVFDENPQRGK---------GCKCE-IDSVRKVFDLMPA--RDVVSWNTVIAGNAQ 213
G + ++FD P+R KC I S R++FDLMP ++++SWN++I+G AQ
Sbjct: 173 GLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQ 232
Query: 214 NGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFI 273
+ +D+ ++ D + D + +S++ + +H + + R DV
Sbjct: 233 TS---DGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRR----DVVT 285
Query: 274 GSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLK-AK 332
+++ID YAK V H+ F +P+RD +++NS++AG VQN + + F M K +
Sbjct: 286 WATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESH 345
Query: 333 VKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMAR 392
+ P + V+PA A L L+ +H I+ F + +L+DMY+KCG+I+ A
Sbjct: 346 LLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAM 405
Query: 393 YIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAG 452
+F+ IE + + W A+I G A+HG A + ++ ++P + F+ VL ACSH+G
Sbjct: 406 LVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSG 465
Query: 453 LVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTL 512
LV EG F M + +I P L+HY + D+L R+G +E A + I M ++P +W T
Sbjct: 466 LVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTF 525
Query: 513 LAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLK 572
L AC HK E E V ++L N +YVL+SN+Y++ WKD ++R M+ + ++
Sbjct: 526 LTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIE 585
Query: 573 KTPACSWIEIGNKVHTFLA 591
K P CSWIE+ +VH F
Sbjct: 586 KIPGCSWIELDGRVHEFFV 604
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 148/309 (47%), Gaps = 21/309 (6%)
Query: 193 FDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDV 252
F D WN VI ++ R+AL ++ M ++ + D F+LS +L + V
Sbjct: 78 FSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFV 137
Query: 253 VKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGC 312
GM+IHG+ + G D+F+ + LI +Y KC + S + F +P RD++S+NS+I G
Sbjct: 138 KGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGY 197
Query: 313 VQNGKFDQGIGFFRQMLKAKVKPMQ----VSFSSVIPACAHLT-ALNLGKQLHGCIIRLG 367
V+ G F M PM+ +S++S+I A + +++ +L
Sbjct: 198 VKCGLIVSARELFDLM------PMEMKNLISWNSMISGYAQTSDGVDIASKLFA-----D 246
Query: 368 FDDNKFIA-SSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLF 426
+ I+ +S++D Y K G I+ A+ +FD + RD+V W +I G A G A +LF
Sbjct: 247 MPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLF 306
Query: 427 EKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGR 486
++M V VA+ +++ E + F+ MEK+ + P V + +
Sbjct: 307 DQMPHRDV----VAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQ 362
Query: 487 AGRLEEAYD 495
GRL +A D
Sbjct: 363 LGRLSKAID 371
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 115/255 (45%), Gaps = 13/255 (5%)
Query: 281 YAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSF 340
+A+C E+ + +F D WN++I Q + ML+ V + S
Sbjct: 65 FARCVFHEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSL 124
Query: 341 SSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIET 400
S V+ AC+ L + G Q+HG + + G + F+ + L+ +Y KCG + ++R +FD++
Sbjct: 125 SLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPK 184
Query: 401 RDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKY 460
RD V++ ++I G G + A LF+ M + M A + G VD K
Sbjct: 185 RDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDG-VDIASKL 243
Query: 461 FNSM-EKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSV--WSTLLAACR 517
F M EKD L + ++ D + GR+E+A M P V W+T++
Sbjct: 244 FADMPEKD------LISWNSMIDGYVKHGRIEDAKGLFDVM---PRRDVVTWATMIDGYA 294
Query: 518 AHKSVELAEKVVDKI 532
V A+ + D++
Sbjct: 295 KLGFVHHAKTLFDQM 309
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 263 bits (673), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 142/392 (36%), Positives = 219/392 (55%), Gaps = 6/392 (1%)
Query: 182 CKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
C C + S +++ +V ++++ A+ G A+ + +K D+ L
Sbjct: 294 CGCLV-SAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVG 352
Query: 242 ILPIF--AEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPY 299
IL + H+D+ GM +HGYAI+ G + + LI MY+K + VE L F L
Sbjct: 353 ILHGCKKSSHIDI--GMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQE 410
Query: 300 RDAISWNSIIAGCVQNGKFDQGIGFFRQM-LKAKVKPMQVSFSSVIPACAHLTALNLGKQ 358
ISWNS+I+GCVQ+G+ F QM L + P ++ +S++ C+ L LNLGK+
Sbjct: 411 TPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKE 470
Query: 359 LHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGH 418
LHG +R F++ F+ ++L+DMYAKCGN A +F I+ W ++I G ++ G
Sbjct: 471 LHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGL 530
Query: 419 ALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYA 478
A+S + +M E G++P + F+ VL+AC+H G VDEG F +M K+F I+P L+HYA
Sbjct: 531 QHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYA 590
Query: 479 AVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPE 538
+ LLGRA EA I M I+P +VW LL+AC H+ +E+ E V K+ ++D +
Sbjct: 591 LMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYK 650
Query: 539 NMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKG 570
N G YVLMSN+Y+ W D ++R M+ G
Sbjct: 651 NGGLYVLMSNLYATEAMWDDVVRVRNMMKDNG 682
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 150/317 (47%), Gaps = 30/317 (9%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
GLD +Y +L+N+Y K KGC + S + +FD MP RD
Sbjct: 80 GLDRFVYVKTSLLNLYLK---------------------KGC---VTSAQMLFDEMPERD 115
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
V WN +I G ++NG +A + M P + TL ++LP + V +G +HG
Sbjct: 116 TVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHG 175
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQ 320
A + G + D + ++LI Y+KC + + F + + +SWN++I Q+G ++
Sbjct: 176 VAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEE 235
Query: 321 GIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVD 380
I F+ M + V+ V+ +++ AH++ + LH +++ G ++ + +SLV
Sbjct: 236 AITVFKNMFEKNVEISPVTIINLLS--AHVSH----EPLHCLVVKCGMVNDISVVTSLVC 289
Query: 381 MYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVA 440
Y++CG + A ++ + +V T+I+ A G AV F K + ++ VA
Sbjct: 290 AYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVA 349
Query: 441 FMAVLTACSHAGLVDEG 457
+ +L C + +D G
Sbjct: 350 LVGILHGCKKSSHIDIG 366
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 169/381 (44%), Gaps = 43/381 (11%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
GL+ D NAL++ Y K LG SA +F E M +
Sbjct: 181 GLELDSQVKNALISFYSKCAELG---SAEVLFRE---------------------MKDKS 216
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
VSWNT+I +Q+G+ EA+ + + M + ++ T+ ++L H +H
Sbjct: 217 TVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSH------EPLHC 270
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQ 320
++ G D+ + +SL+ Y++C + + R + + SI++ + G D
Sbjct: 271 LVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDI 330
Query: 321 GIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVD 380
+ +F + + +K V+ ++ C + +++G LHG I+ G + + L+
Sbjct: 331 AVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLIT 390
Query: 381 MYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEK-MLEDGVRPCYV 439
MY+K +++ ++F++++ +++W ++I GC G A A +F + ML G+ P +
Sbjct: 391 MYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAI 450
Query: 440 AFMAVLTACSHAGLVD-----EGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAY 494
++L CS ++ G+ N+ E + + A+ D+ + G +A
Sbjct: 451 TIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVC------TALIDMYAKCGNEVQAE 504
Query: 495 DFISNMGIQPTGSVWSTLLAA 515
++ P + W+++++
Sbjct: 505 SVFKSIK-APCTATWNSMISG 524
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 120/251 (47%), Gaps = 2/251 (0%)
Query: 199 RDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGM-- 256
RD+ +++++ + + + R++ L P+ FT+S L + K
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 257 EIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNG 316
++ + + G D V++ +SL+++Y K V + F +P RD + WN++I G +NG
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 317 KFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIAS 376
F ML+ P + +++P C ++ G+ +HG + G + + + +
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKN 190
Query: 377 SLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRP 436
+L+ Y+KC + A +F +++ + V+W +I + G +A+++F+ M E V
Sbjct: 191 ALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEI 250
Query: 437 CYVAFMAVLTA 447
V + +L+A
Sbjct: 251 SPVTIINLLSA 261
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 16/225 (7%)
Query: 299 YRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGK- 357
YRD ++S++ C+ I FR +L++ + P + S + A T+ N K
Sbjct: 10 YRDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATT--TSFNSFKL 67
Query: 358 ---QLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCA 414
Q+ + + G D ++ +SL+++Y K G + A+ +FD++ RD V W A+I G +
Sbjct: 68 QVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYS 127
Query: 415 MHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGL 474
+G+ DA LF ML+ G P + +L C G V +G K GL
Sbjct: 128 RNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKS-----GL 182
Query: 475 EHYAAVADLL----GRAGRLEEAYDFISNMGIQPTGSVWSTLLAA 515
E + V + L + L A M + T S W+T++ A
Sbjct: 183 ELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVS-WNTMIGA 226
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 261 bits (668), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 129/378 (34%), Positives = 216/378 (57%), Gaps = 2/378 (0%)
Query: 204 WNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAI 263
WN ++ ++ +A+ + M + PD ++L ++ + D G E+H A+
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 264 RHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIG 323
R GF GD F S I +Y K E++ + F P R SWN+II G G+ ++ +
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 324 FFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNK--FIASSLVDM 381
F M ++ ++P + SV +C L L+L QLH C+++ ++ + +SL+DM
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 382 YAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAF 441
Y KCG + +A +IF+++ R++V+W+++I+G A +G+ L+A+ F +M E GVRP + F
Sbjct: 265 YGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITF 324
Query: 442 MAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMG 501
+ VL+AC H GLV+EG YF M+ +F + PGL HY + DLL R G+L+EA + M
Sbjct: 325 VGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMP 384
Query: 502 IQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAK 561
++P VW L+ C VE+AE V ++ ++P N G YV+++N+Y+ WKD +
Sbjct: 385 MKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVER 444
Query: 562 LRIHMRSKGLKKTPACSW 579
+R M++K + K PA S+
Sbjct: 445 VRKLMKTKKVAKIPAYSY 462
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 149/316 (47%), Gaps = 30/316 (9%)
Query: 107 ISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGFG 166
+ P R+ P ++KA+ G D + + + +YCK G F
Sbjct: 113 VLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKA---GEFE 169
Query: 167 SANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVRE 226
+A KVFDENP+R G SWN +I G G EA++M +
Sbjct: 170 NARKVFDENPERKLG---------------------SWNAIIGGLNHAGRANEAVEMFVD 208
Query: 227 MGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFD--GDVFIGSSLIDMYAKC 284
M L+PD FT+ S+ D+ ++H ++ + D+ + +SLIDMY KC
Sbjct: 209 MKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKC 268
Query: 285 NRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVI 344
R++ + F + R+ +SW+S+I G NG + + FRQM + V+P +++F V+
Sbjct: 269 GRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVL 328
Query: 345 PACAHLTALNLGKQLHGCIIRLGFDDNKFIA--SSLVDMYAKCGNIKMARYIFDKIETR- 401
AC H + GK + +++ F+ ++ +VD+ ++ G +K A+ + +++ +
Sbjct: 329 SACVHGGLVEEGKT-YFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKP 387
Query: 402 DMVAWTAIIMGCAMHG 417
+++ W ++ GC G
Sbjct: 388 NVMVWGCLMGGCEKFG 403
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 2/230 (0%)
Query: 291 LRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHL 350
R+ L Y A WN+I+ +++ I + M+++ V P + S VI A +
Sbjct: 71 FRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQI 130
Query: 351 TALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAII 410
LGK+LH +RLGF ++F S + +Y K G + AR +FD+ R + +W AII
Sbjct: 131 HDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAII 190
Query: 411 MGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNS-MEKDFR 469
G G A +AV +F M G+ P ++V +C G + ++ ++
Sbjct: 191 GGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTE 250
Query: 470 IAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAH 519
+ ++ D+ G+ GR++ A M + S WS+++ A+
Sbjct: 251 EKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVS-WSSMIVGYAAN 299
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/451 (30%), Positives = 242/451 (53%), Gaps = 33/451 (7%)
Query: 192 VFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREM--GDDKLKPDSFTLSSILPIFAEH 249
VF + ++ WNT+I G +++ A+ + +M +KP T S+ +
Sbjct: 80 VFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRL 139
Query: 250 VDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMY---------------------------- 281
G ++HG I+ G + D FI ++++ MY
Sbjct: 140 GQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMI 199
Query: 282 ---AKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQV 338
AKC ++ + F +P R+ +SWNS+I+G V+NG+F + FR+M + VKP
Sbjct: 200 MGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGF 259
Query: 339 SFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKI 398
+ S++ ACA+L A G+ +H I+R F+ N + ++L+DMY KCG I+ +F+
Sbjct: 260 TMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECA 319
Query: 399 ETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGW 458
+ + W ++I+G A +G A+ LF ++ G+ P V+F+ VLTAC+H+G V
Sbjct: 320 PKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRAD 379
Query: 459 KYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRA 518
++F M++ + I P ++HY + ++LG AG LEEA I NM ++ +WS+LL+ACR
Sbjct: 380 EFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRK 439
Query: 519 HKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACS 578
+VE+A++ + +DP+ YVL+SN Y++ +++A + R+ M+ + ++K CS
Sbjct: 440 IGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCS 499
Query: 579 WIEIGNKVHTFLAGDKSHPYYDKINEALNIL 609
IE+ +VH F++ +HP +I L+IL
Sbjct: 500 SIEVDFEVHEFISCGGTHPKSAEIYSLLDIL 530
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 151/328 (46%), Gaps = 44/328 (13%)
Query: 107 ISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMY----CKVQN- 161
+ P R +PS+ KA GL+ D + N +++MY C ++
Sbjct: 122 VKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAW 181
Query: 162 ---LGGFGSANKVFDENPQRGKGCKCE-IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMF 217
LG G V N KC ID + +FD MP R+ VSWN++I+G +NG F
Sbjct: 182 RIFLGMIGF--DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRF 239
Query: 218 REALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSL 277
++ALDM REM + +KPD FT+ S+L A +G IH Y +R+ F+ + + ++L
Sbjct: 240 KDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTAL 299
Query: 278 IDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQ 337
IDMY KC +E L F P + WNS+I G NG ++ + F ++ ++ ++P
Sbjct: 300 IDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDS 359
Query: 338 VSFSSVIPACAH---------------------------------LTALNLGKQLHGCII 364
VSF V+ ACAH L L ++ I
Sbjct: 360 VSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIK 419
Query: 365 RLGFDDNKFIASSLVDMYAKCGNIKMAR 392
+ +++ I SSL+ K GN++MA+
Sbjct: 420 NMPVEEDTVIWSSLLSACRKIGNVEMAK 447
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 261 bits (666), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/394 (34%), Positives = 229/394 (58%), Gaps = 10/394 (2%)
Query: 192 VFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDK-LKPDSFTLSSILPIFAEHV 250
VF MP R++ SWN +I +++G +++D+ M + ++PD FTL IL +
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 148
Query: 251 DVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIA 310
+ G IH ++ GF +F+ S+L+ MY ++ H+ + F +P RD++ + ++
Sbjct: 149 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFG 208
Query: 311 GCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIR----L 366
G VQ G+ G+ FR+M + V S++ AC L AL GK +HG IR L
Sbjct: 209 GYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCL 268
Query: 367 GFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLF 426
G + + +++ DMY KC + A +F + RD+++W+++I+G + G + + LF
Sbjct: 269 GLN----LGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLF 324
Query: 427 EKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGR 486
++ML++G+ P V F+ VL+AC+H GLV++ W YF M+ ++ I P L+HYA+VAD + R
Sbjct: 325 DEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQ-EYNIVPELKHYASVADCMSR 383
Query: 487 AGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLM 546
AG LEEA F+ +M ++P +V +L+ C+ + +VE+ E+V +++ + P YV +
Sbjct: 384 AGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTL 443
Query: 547 SNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWI 580
+ +YSAA R+ +A LR M+ K + K P CS I
Sbjct: 444 AGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 130/306 (42%), Gaps = 40/306 (13%)
Query: 190 RKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEH 249
RK+FD MP RD V + + G Q G L M REMG DS + S+L +
Sbjct: 189 RKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQL 248
Query: 250 VDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSII 309
+ G +HG+ IR + +G+++ DMY KC+ ++++ F + RD ISW+S+I
Sbjct: 249 GALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLI 308
Query: 310 AGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFD 369
G +G F +MLK ++P V+F V+ ACAH G
Sbjct: 309 LGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAH----------------GGLV 352
Query: 370 DNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM 429
+ ++ L+ Y +K + D C L+ EK
Sbjct: 353 EKSWLYFRLMQEYNIVPELKHYASVAD----------------CMSRAGLLEEA---EKF 393
Query: 430 LED-GVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAP-GLEHYAAVADLLGRA 487
LED V+P AVL+ C G V+ G + + ++ P +Y +A L A
Sbjct: 394 LEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVAREL---IQLKPRKASYYVTLAGLYSAA 450
Query: 488 GRLEEA 493
GR +EA
Sbjct: 451 GRFDEA 456
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 128/266 (48%), Gaps = 4/266 (1%)
Query: 270 DVFIGSSLIDMYAKCNRV-EHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQM 328
+V + S L+ Y+K N + SL F+ +PYR+ SWN II ++G + I F +M
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 329 LKAK-VKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGN 387
+ V+P + ++ AC+ G +H ++LGF + F++S+LV MY G
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGK 184
Query: 388 IKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTA 447
+ AR +FD + RD V +TA+ G G A+ +++F +M G V +++L A
Sbjct: 185 LLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMA 244
Query: 448 CSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGS 507
C G + G K + GL A+ D+ + L+ A+ NM + S
Sbjct: 245 CGQLGALKHG-KSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVIS 303
Query: 508 VWSTLLAACRAHKSVELAEKVVDKIL 533
WS+L+ V ++ K+ D++L
Sbjct: 304 -WSSLILGYGLDGDVVMSFKLFDEML 328
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/440 (31%), Positives = 240/440 (54%), Gaps = 22/440 (5%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
GL+ + +AL++MY N G A VF + K ++S
Sbjct: 268 GLESSPFAISALIDMY---SNCGSLIYAADVFHQE-------KLAVNS-----------S 306
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
V WN++++G N AL ++ ++ L DS+TLS L I +V++ G+++H
Sbjct: 307 VAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHS 366
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQ 320
+ G++ D +GS L+D++A ++ + + F+ LP +D I+++ +I GCV++G
Sbjct: 367 LVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSL 426
Query: 321 GIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVD 380
FR+++K + Q S+++ C+ L +L GKQ+HG I+ G++ A++LVD
Sbjct: 427 AFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVD 486
Query: 381 MYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVA 440
MY KCG I +FD + RD+V+WT II+G +G +A F KM+ G+ P V
Sbjct: 487 MYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVT 546
Query: 441 FMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM 500
F+ +L+AC H+GL++E +M+ ++ + P LEHY V DLLG+AG +EA + I+ M
Sbjct: 547 FLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKM 606
Query: 501 GIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAA 560
++P ++W++LL AC HK+ L + +K+L P++ Y +SN Y+ W +
Sbjct: 607 PLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLS 666
Query: 561 KLRIHMRSKGLKKTPACSWI 580
K+R + G K++ SWI
Sbjct: 667 KVREAAKKLGAKES-GMSWI 685
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 126/256 (49%), Gaps = 34/256 (13%)
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGD-DKLKPDSFTLSSILPIFAEH 249
KVFD M R++V+W T+++G +G +A+++ R M D ++ + F S++L
Sbjct: 61 KVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLV 120
Query: 250 VDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSII 309
D+ G+ ++ + GDV + +S++DMY K R+ + +F + + SWN++I
Sbjct: 121 GDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLI 180
Query: 310 AGCVQNGKFDQGIGFFRQMLKAKV--------------KPMQVSF------------SSV 343
+G + G D+ + F +M + V P + F
Sbjct: 181 SGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFA 240
Query: 344 IP----ACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIF--DK 397
+P AC+ L +GKQLH C+++ G + + F S+L+DMY+ CG++ A +F +K
Sbjct: 241 LPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEK 300
Query: 398 IETRDMVA-WTAIIMG 412
+ VA W +++ G
Sbjct: 301 LAVNSSVAVWNSMLSG 316
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 143/336 (42%), Gaps = 59/336 (17%)
Query: 254 KGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCV 313
+G I + I+ G +VFI +++I MY + + + F + R+ ++W ++++G
Sbjct: 23 RGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYT 82
Query: 314 QNGKFDQGIGFFRQMLKAKVKPM-QVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNK 372
+GK ++ I +R+ML ++ + + +S+V+ AC + + LG ++ I + +
Sbjct: 83 SDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDV 142
Query: 373 FIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLED 432
+ +S+VDMY K G + A F +I +W +I G G +AV+LF +M +
Sbjct: 143 VLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQP 202
Query: 433 GV--------------RPCYVAFMAV----------------LTACSHAGLVDEGWKYFN 462
V P + F+ L ACS GL+ G +
Sbjct: 203 NVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHC 262
Query: 463 SMEKDFRIAPGLEH----YAAVADLLGRAGRLEEAYDFI--SNMGIQPTGSVWSTLLAAC 516
+ K GLE +A+ D+ G L A D + + + +VW+++L+
Sbjct: 263 CVVKS-----GLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSG- 316
Query: 517 RAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSA 552
L++ EN A L+ IY +
Sbjct: 317 ----------------FLINEENEAALWLLLQIYQS 336
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 6/175 (3%)
Query: 347 CAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAW 406
C + A G+ + +I+ G N FIA++++ MY + A +FD++ R++V W
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 407 TAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFM--AVLTACSHAGLVDEGWKYFNSM 464
T ++ G G A+ L+ +ML D FM AVL AC G + G + +
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRML-DSEEEAANEFMYSAVLKACGLVGDIQLGILVYERI 133
Query: 465 EKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAA-CRA 518
K+ + + +V D+ + GRL EA + ++P+ + W+TL++ C+A
Sbjct: 134 GKE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLISGYCKA 186
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 258 bits (660), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 229/385 (59%), Gaps = 9/385 (2%)
Query: 191 KVFDLMPARDV--VSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAE 248
+VFD M RD +WN++I+G A+ G + +A+ + +M +D +KPD FT +L
Sbjct: 148 EVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGG 207
Query: 249 HVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSI 308
V G IH ++ GF DV++ ++L+ MYAKC + + F ++P++D +SWNS+
Sbjct: 208 IGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSM 267
Query: 309 IAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGF 368
+ G + +G + + FR M++ ++P +V+ SSV+ A + + G+QLHG +IR G
Sbjct: 268 LTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGM 324
Query: 369 DDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEK 428
+ +A++L+ +Y+K G + A +IFD++ RD V+W AII + H + + FE+
Sbjct: 325 EWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAII---SAHSKNSNGLKYFEQ 381
Query: 429 MLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAG 488
M +P + F++VL+ C++ G+V++G + F+ M K++ I P +EHYA + +L GRAG
Sbjct: 382 MHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAG 441
Query: 489 RLEEAYDFI-SNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMS 547
+EEAY I MG++ +VW LL AC H + ++ E ++ ++P+N + L+
Sbjct: 442 MMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLI 501
Query: 548 NIYSAAKRWKDAAKLRIHMRSKGLK 572
IYS AKR +D ++R M +GL+
Sbjct: 502 RIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 160/330 (48%), Gaps = 39/330 (11%)
Query: 106 GISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGF 165
G+ P R FP +LKA G +D+Y NAL+ MY K
Sbjct: 190 GVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAK------- 242
Query: 166 GSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVR 225
C +I R VFD++P +D VSWN+++ G +G+ EALD+ R
Sbjct: 243 ----------------CG-DIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFR 285
Query: 226 EMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCN 285
M + ++PD +SS+L A + G ++HG+ IR G + ++ + ++LI +Y+K
Sbjct: 286 LMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRG 342
Query: 286 RVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIP 345
++ + F + RD +SWN+II+ +N G+ +F QM +A KP ++F SV+
Sbjct: 343 QLGQACFIFDQMLERDTVSWNAIISAHSKN---SNGLKYFEQMHRANAKPDGITFVSVLS 399
Query: 346 ACAHLTALNLGKQLHGCIIR-LGFDDNKFIASSLVDMYAKCGNIKMARYIFDK---IETR 401
CA+ + G++L + + G D + +V++Y + G ++ A + + +E
Sbjct: 400 LCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAG 459
Query: 402 DMVAWTAIIMGCAMHGHA----LDAVSLFE 427
V W A++ C +HG+ + A LFE
Sbjct: 460 PTV-WGALLYACYLHGNTDIGEVAAQRLFE 488
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 171/355 (48%), Gaps = 37/355 (10%)
Query: 255 GMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDA--ISWNSIIAGC 312
G+ +H + ++ I S L+ +YA C E + F + RD+ +WNS+I+G
Sbjct: 111 GVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGY 170
Query: 313 VQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNK 372
+ G+++ + + QM + VKP + +F V+ AC + ++ +G+ +H +++ GF +
Sbjct: 171 AELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDV 230
Query: 373 FIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLED 432
++ ++LV MYAKCG+I AR +FD I +D V+W +++ G HG +A+ +F M+++
Sbjct: 231 YVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQN 290
Query: 433 GVRPCYVAFMAVLT---ACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRA-- 487
G+ P VA +VL + H G GW ME + +A L + LG+A
Sbjct: 291 GIEPDKVAISSVLARVLSFKH-GRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACF 349
Query: 488 ---GRLE--------------------EAYDFISNMGIQPTGSVWSTLLAACRAHKSVEL 524
LE + ++ + +P G + ++L+ C VE
Sbjct: 350 IFDQMLERDTVSWNAIISAHSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVED 409
Query: 525 AEK---VVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPA 576
E+ ++ K +DP+ M Y M N+Y A ++A + + + GL+ P
Sbjct: 410 GERLFSLMSKEYGIDPK-MEHYACMVNLYGRAGMMEEAYSMIV--QEMGLEAGPT 461
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 258 bits (659), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 156/521 (29%), Positives = 257/521 (49%), Gaps = 49/521 (9%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFD-----------ENPQRGKGCK-CEIDS 188
G D + ++L++MY K G F +F+ N C+ +ID
Sbjct: 155 GNDGTKFAVSSLIHMYSKC---GKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDK 211
Query: 189 VRKVFDLMPA-RDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFA 247
VF P D +SWNT+IAG AQNG EAL M M ++ LK D + ++L + +
Sbjct: 212 ALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLS 271
Query: 248 EHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNS 307
+ G E+H +++G + F+ S ++D+Y KC ++++ A L + + S +S
Sbjct: 272 SLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASS 331
Query: 308 IIAGCVQNGKFDQGIGFFRQMLKAKV--------------------------------KP 335
+I G GK + F + + + P
Sbjct: 332 MIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTP 391
Query: 336 MQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIF 395
+ SV+ AC+ + GK++HG +R G +K + ++ VDMY+KCGN++ A IF
Sbjct: 392 DSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIF 451
Query: 396 DKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVD 455
D RD V + A+I GCA HGH + FE M E G +P + FMA+L+AC H GLV
Sbjct: 452 DSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVL 511
Query: 456 EGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMG-IQPTGSVWSTLLA 514
EG KYF SM + + I+P HY + DL G+A RL++A + + + ++ + L
Sbjct: 512 EGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLN 571
Query: 515 ACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKT 574
AC +K+ EL ++V +K+L+++ N Y+ ++N Y+++ RW + ++R MR K L+
Sbjct: 572 ACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIF 631
Query: 575 PACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEK 615
CSW I + H F + D SH + I L+ + + + +
Sbjct: 632 SGCSWANIDKQFHMFTSSDISHYETEAIYAMLHFVTKDLSE 672
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 121/281 (43%), Gaps = 53/281 (18%)
Query: 270 DVFIGSSLIDMYAKCNRVEHSLRAFYLLP-YRDAISWNSIIAGCVQ-NGKFDQGIGFFRQ 327
+V+ +++I Y K N V+ + F RD I++N++++G + +G + I F +
Sbjct: 53 NVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGE 112
Query: 328 MLKAKVKPMQV---SFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAK 384
M + + + + + ++++ A LT + G+QLHG +++ G D KF SSL+ MY+K
Sbjct: 113 MHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSK 172
Query: 385 CGNIKMARYIFD----------------------------------KIETRDMVAWTAII 410
CG K IF+ E D ++W +I
Sbjct: 173 CGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLI 232
Query: 411 MGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACS-----------HAGLVDEGW- 458
G A +G+ +A+ + M E+G++ +F AVL S HA ++ G
Sbjct: 233 AGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSY 292
Query: 459 --KYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFI 497
K+ +S D G YA A LL G L A I
Sbjct: 293 SNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMI 333
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 258 bits (659), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 130/394 (32%), Positives = 231/394 (58%), Gaps = 7/394 (1%)
Query: 192 VFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAE--- 248
VFD M ++ VSW +I+G N + +D+ R M + L+P+ TL S+LP E
Sbjct: 207 VFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNY 266
Query: 249 HVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSI 308
+VK EIHG++ RHG D + ++ + MY +C V S F RD + W+S+
Sbjct: 267 GSSLVK--EIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSM 324
Query: 309 IAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGF 368
I+G + G + + QM K ++ V+ +++ AC + T L+ +H I++ GF
Sbjct: 325 ISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGF 384
Query: 369 DDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEK 428
+ + ++L+DMYAKCG++ AR +F ++ +D+V+W+++I +HGH +A+ +F+
Sbjct: 385 MSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKG 444
Query: 429 MLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAG 488
M++ G +AF+A+L+AC+HAGLV+E F K + + LEHYA +LLGR G
Sbjct: 445 MIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGK-YHMPVTLEHYACYINLLGRFG 503
Query: 489 RLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVV-DKILLVDPENMGAYVLMS 547
++++A++ NM ++P+ +WS+LL+AC H +++A K++ ++++ +P+N YVL+S
Sbjct: 504 KIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLS 563
Query: 548 NIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIE 581
I++ + + A ++R M+ + L K S IE
Sbjct: 564 KIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 177/338 (52%), Gaps = 11/338 (3%)
Query: 188 SVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFA 247
+VRKVFD M RD VS+ ++I Q+G+ EA+ +++EM P S ++S+L +
Sbjct: 100 AVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCT 159
Query: 248 EHVDVVKGMEI-HGYA-IRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISW 305
K + H + V + ++L+DMY K + + F + ++ +SW
Sbjct: 160 RMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSW 219
Query: 306 NSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLT-ALNLGKQLHGCII 364
++I+GCV N ++ G+ FR M + ++P +V+ SV+PAC L +L K++HG
Sbjct: 220 TAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSF 279
Query: 365 RLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVS 424
R G ++ + ++ + MY +CGN+ ++R +F+ + RD+V W+++I G A G + ++
Sbjct: 280 RHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMN 339
Query: 425 LFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYA---AVA 481
L +M ++G+ V +A+++AC+++ L+ + +++ + H A+
Sbjct: 340 LLNQMRKEGIEANSVTLLAIVSACTNSTLLS----FASTVHSQILKCGFMSHILLGNALI 395
Query: 482 DLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAH 519
D+ + G L A + + + S WS+++ A H
Sbjct: 396 DMYAKCGSLSAAREVFYELTEKDLVS-WSSMINAYGLH 432
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 125/246 (50%), Gaps = 6/246 (2%)
Query: 208 IAGNAQNGMFREALDMVREMGDDKLKPDSFT--LSSILPIFA-EHVDVVKGMEIHGYAIR 264
+ G + + EAL + + + L + FT L S++ A + + G ++H ++
Sbjct: 17 LKGLVSDQFYDEALRLYK-LKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLK 75
Query: 265 HGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGF 324
G D D + +SLI MYAK +R + F + +RD +S+ SII C Q+G + +
Sbjct: 76 AGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKL 135
Query: 325 FRQMLKAKVKPMQVSFSSVIPACAHL-TALNLGKQLHGCI-IRLGFDDNKFIASSLVDMY 382
++M P +S++ C + ++ + + H + + ++ ++++LVDMY
Sbjct: 136 IKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMY 195
Query: 383 AKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFM 442
K + A ++FD++E ++ V+WTA+I GC + + V LF M + +RP V +
Sbjct: 196 LKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLL 255
Query: 443 AVLTAC 448
+VL AC
Sbjct: 256 SVLPAC 261
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 112/247 (45%), Gaps = 7/247 (2%)
Query: 297 LPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKA-KVKPMQVSFSSVIPACA-HLTALN 354
L R + + + G V + +D+ + ++ + + SVI ACA
Sbjct: 5 LSSRLNLELGNKLKGLVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFL 64
Query: 355 LGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCA 414
LG QLH ++ G D + +++SL+ MYAK R +FD++ RD V++ +II C
Sbjct: 65 LGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCC 124
Query: 415 MHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSME-KDFRIAPG 473
G +A+ L ++M G P ++L C+ G + + F+++ D R+
Sbjct: 125 QDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQES 184
Query: 474 LEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKIL 533
+ A+ D+ + A+ M ++ S W+ +++ C A+++ E+ VD
Sbjct: 185 VLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVS-WTAMISGCVANQNYEMG---VDLFR 240
Query: 534 LVDPENM 540
+ EN+
Sbjct: 241 AMQRENL 247
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/375 (34%), Positives = 218/375 (58%), Gaps = 16/375 (4%)
Query: 252 VVKGMEIHGYA--------IRHGFDG----DVFIGSSLIDMYAKCNRVEHSLRAFYLLPY 299
VV+ +H YA R FD +V ++++ YA+ + +++ F +P
Sbjct: 162 VVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPE 221
Query: 300 RDAISWNSIIAGCVQNGKFDQGIGFFRQML-KAKVKPMQVSFSSVIPACAHLTALNLGKQ 358
RD SWN+I+A C QNG F + + FR+M+ + ++P +V+ V+ ACA L L K
Sbjct: 222 RDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKG 281
Query: 359 LHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGH 418
+H R + F+++SLVD+Y KCGN++ A +F + + AW ++I A+HG
Sbjct: 282 IHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGR 341
Query: 419 ALDAVSLFEKMLE---DGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLE 475
+ +A+++FE+M++ + ++P ++ F+ +L AC+H GLV +G YF+ M F I P +E
Sbjct: 342 SEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIE 401
Query: 476 HYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLV 535
HY + DLLGRAGR +EA + +S M ++ ++W +LL AC+ H ++LAE V ++ +
Sbjct: 402 HYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVAL 461
Query: 536 DPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKS 595
+P N G +M+N+Y W++A + R ++ + K P S IEI N+VH F + DKS
Sbjct: 462 NPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKS 521
Query: 596 HPYYDKINEALNILL 610
HP ++I L+ L+
Sbjct: 522 HPETEEIYMILDSLI 536
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 160/356 (44%), Gaps = 23/356 (6%)
Query: 109 PTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGFGSA 168
P +P +LK++ G + AL++ Y ++ A
Sbjct: 124 PNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYA--SSVSHITLA 181
Query: 169 NKVFDENPQR----------GKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFR 218
++FDE +R G +I + +F+ MP RDV SWN ++A QNG+F
Sbjct: 182 RQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFL 241
Query: 219 EALDMVREM-GDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSL 277
EA+ + R M + ++P+ T+ +L A+ + IH +A R DVF+ +SL
Sbjct: 242 EAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSL 301
Query: 278 IDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAK---VK 334
+D+Y KC +E + F + + +WNS+I +G+ ++ I F +M+K +K
Sbjct: 302 VDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIK 361
Query: 335 PMQVSFSSVIPACAHLTALNLGKQLHGCII-RLGFDDNKFIASSLVDMYAKCGNIKMARY 393
P ++F ++ AC H ++ G+ + R G + L+D+ + G A
Sbjct: 362 PDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALE 421
Query: 394 IFDKIETR-DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRP---CYVAFMAVL 445
+ ++ + D W +++ C +HGH LD + K L + P YVA MA L
Sbjct: 422 VMSTMKMKADEAIWGSLLNACKIHGH-LDLAEVAVKNLV-ALNPNNGGYVAMMANL 475
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 146/459 (31%), Positives = 240/459 (52%), Gaps = 34/459 (7%)
Query: 145 DLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSW 204
DL NAL++MYC G + F VF + ++VSW
Sbjct: 334 DLPLDNALLDMYCSC------GDMREAF------------------YVFGRIHNPNLVSW 369
Query: 205 NTVIAGNAQNGMFREALDMVREMGD-DKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAI 263
N++I+G ++NG +A+ M R + +PD +T S+ + AE V G +HG
Sbjct: 370 NSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVT 429
Query: 264 RHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIG 323
+ G++ VF+G++L+ MY K E + + F ++ RD + W +I G + G + +
Sbjct: 430 KLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQ 489
Query: 324 FFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYA 383
FF +M + K + S SSVI AC+ + L G+ H IR GFD + +LVDMY
Sbjct: 490 FFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYG 549
Query: 384 KCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMA 443
K G + A IF D+ W +++ + HG A+S FE++LE+G P V +++
Sbjct: 550 KNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLS 609
Query: 444 VLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQ 503
+L ACSH G +G +N M K+ I G +HY+ + +L+ +AG ++EA + I
Sbjct: 610 LLAACSHRGSTLQGKFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQ---S 665
Query: 504 PTGS----VWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDA 559
P G+ +W TLL+AC +++++ ++IL +DPE+ ++L+SN+Y+ RW+D
Sbjct: 666 PPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDV 725
Query: 560 AKLRIHMRSKGLKKTPACSWIEI-GNKVHTFLAGDKSHP 597
A++R +R K P SWIE+ N F +GD+S+P
Sbjct: 726 AEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNP 764
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 157/267 (58%), Gaps = 2/267 (0%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFRE-ALDMVREMGDDKLKPDSFTLSSILP 244
++ RKVFD MP R+VVS+N + + ++N F A + M + +KP+S T +S++
Sbjct: 148 LEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQ 207
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS 304
+ A DV+ G ++ I+ G+ +V + +S++ MY+ C +E + R F + RDA++
Sbjct: 208 VCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVA 267
Query: 305 WNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCII 364
WN++I G ++N K + G+ FFR ML + V P Q ++S V+ C+ L + +LGK +H II
Sbjct: 268 WNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARII 327
Query: 365 RLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVS 424
+ + ++L+DMY CG+++ A Y+F +I ++V+W +II GC+ +G A+
Sbjct: 328 VSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAML 387
Query: 425 LFEKMLEDGV-RPCYVAFMAVLTACSH 450
++ ++L RP F A ++A +
Sbjct: 388 MYRRLLRMSTPRPDEYTFSAAISATAE 414
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 190/371 (51%), Gaps = 4/371 (1%)
Query: 165 FGSANKVFDENPQRGKGCKC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDM 223
G ++ V + G C +++S R++FD + RD V+WNT+I G+ +N + L
Sbjct: 228 LGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMF 287
Query: 224 VREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAK 283
R M + P FT S +L ++ G IH I D+ + ++L+DMY
Sbjct: 288 FRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCS 347
Query: 284 CNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKV-KPMQVSFSS 342
C + + F + + +SWNSII+GC +NG +Q + +R++L+ +P + +FS+
Sbjct: 348 CGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSA 407
Query: 343 VIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRD 402
I A A GK LHG + +LG++ + F+ ++L+ MY K + A+ +FD ++ RD
Sbjct: 408 AISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERD 467
Query: 403 MVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFN 462
+V WT +I+G + G++ AV F +M + R + +V+ ACS ++ +G + F+
Sbjct: 468 VVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQG-EVFH 526
Query: 463 SMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSV 522
+ + A+ D+ G+ G+ E A + I ++ P W+++L A H V
Sbjct: 527 CLAIRTGFDCVMSVCGALVDMYGKNGKYETA-ETIFSLASNPDLKCWNSMLGAYSQHGMV 585
Query: 523 ELAEKVVDKIL 533
E A ++IL
Sbjct: 586 EKALSFFEQIL 596
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 175/379 (46%), Gaps = 12/379 (3%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKL---KPDSFTLSSI 242
++ RKVFD MP R++V+ + A M + ++G ++ P + SS+
Sbjct: 38 LEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIFFMPLNEIASSV 97
Query: 243 LPIFAEHVDVV---KGMEIHGYAIRHGFDGDV---FIGSSLIDMYAKCNRVEHSLRAFYL 296
+ + + V + + +IH + G + ++LI MY +C +E + + F
Sbjct: 98 VELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDK 157
Query: 297 LPYRDAISWNSIIAGCVQNGKF-DQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNL 355
+P+R+ +S+N++ + +N F M VKP +F+S++ CA L + +
Sbjct: 158 MPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLM 217
Query: 356 GKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAM 415
G L+ II+LG+ DN + +S++ MY+ CG+++ AR IFD + RD VAW +I+G
Sbjct: 218 GSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLK 277
Query: 416 HGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLE 475
+ D + F ML GV P + VL CS G G + +A L
Sbjct: 278 NDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLA-DLP 336
Query: 476 HYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLV 535
A+ D+ G + EA+ ++ P W+++++ C + E A + ++L +
Sbjct: 337 LDNALLDMYCSCGDMREAF-YVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRM 395
Query: 536 DPENMGAYVLMSNIYSAAK 554
Y + I + A+
Sbjct: 396 STPRPDEYTFSAAISATAE 414
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 140/309 (45%), Gaps = 45/309 (14%)
Query: 272 FIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIA-------GCVQNGKFDQGIGF 324
+ ++LI MY +C+ +E + + F +P R+ ++ + A G + + + +G
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIK-LGS 81
Query: 325 FRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLG---FDDNKFIASSLVDM 381
F+ + + + S + C +T L +Q+H ++ G ++ + ++L+ M
Sbjct: 82 FQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISM 141
Query: 382 YAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMH-GHALDAVSLFEKMLEDGVRPCYVA 440
Y +CG+++ AR +FDK+ R++V++ A+ + + A A L M + V+P
Sbjct: 142 YVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSST 201
Query: 441 FMAVLTACS-----------HAGLVDEGWK-----------YFNS---MEKDFRIAPGLE 475
F +++ C+ ++ ++ G+ ++S +E RI +
Sbjct: 202 FTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVN 261
Query: 476 HYAAVA---DLLG--RAGRLEEAYDFISNM---GIQPTGSVWSTLLAACRAHKSVELAEK 527
+ AVA ++G + ++E+ F NM G+ PT +S +L C S L +
Sbjct: 262 NRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKL 321
Query: 528 VVDKILLVD 536
+ +I++ D
Sbjct: 322 IHARIIVSD 330
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 156/500 (31%), Positives = 259/500 (51%), Gaps = 35/500 (7%)
Query: 116 SLLKASTXXXXXXXXXXXXXXXXXXGLDF-DLYTANALMNMYCKVQNLGGFGSANKVFDE 174
S+LKA T G D D++ N+L++MY K GF
Sbjct: 231 SVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSK-----GF--------- 276
Query: 175 NPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKP 234
++DS +VFD R++VSWN+++AG N + EAL+M M + ++
Sbjct: 277 ----------DVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEV 326
Query: 235 DSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAF 294
D T+ S+L + + IHG IR G++ + SSLID Y C+ V+ +
Sbjct: 327 DEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVL 386
Query: 295 YLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALN 354
+ Y+D +S +++I+G G+ D+ I F M + P ++ S++ AC+ L
Sbjct: 387 DSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM---RDTPNAITVISLLNACSVSADLR 443
Query: 355 LGKQLHGCIIRLGFDDNKF-IASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGC 413
K HG IR N + +S+VD YAKCG I+MAR FD+I +++++WT II
Sbjct: 444 TSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAY 503
Query: 414 AMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSM-EKDFRIAP 472
A++G A++LF++M + G P V ++A L+AC+H GLV +G F SM E+D + P
Sbjct: 504 AINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHK--P 561
Query: 473 GLEHYAAVADLLGRAGRLEEAYDFISNM--GIQPTGSVWSTLLAACRAH-KSVELAEKVV 529
L+HY+ + D+L RAG ++ A + I N+ ++ S W +L+ CR K + + +VV
Sbjct: 562 SLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVV 621
Query: 530 DKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTF 589
++L ++P Y+L S+ ++A K W+D A +R ++ + ++ S + GN F
Sbjct: 622 AEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRF 681
Query: 590 LAGDKSHPYYDKINEALNIL 609
LAGDK ++N+ + L
Sbjct: 682 LAGDKLSQSDSELNDVVQSL 701
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 175/366 (47%), Gaps = 55/366 (15%)
Query: 193 FDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDV 252
FD M +RD VSWN ++ G G E L ++ +P++ TL +L I A
Sbjct: 84 FDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTL--VLVIHACRSLW 141
Query: 253 VKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGC 312
G +IHGY IR GF G + +S++ MYA + + + + F + RD ISW+ +I
Sbjct: 142 FDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSY 200
Query: 313 VQNGKFDQGIGFFRQML-KAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFD-D 370
VQ+ + G+ F++M+ +AK +P V+ +SV+ AC + +++G+ +HG IR GFD
Sbjct: 201 VQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLA 260
Query: 371 NKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKML 430
+ F+ +SL+DMY+K ++ A +FD+ R++V+W +I+ G + +A+ +F M+
Sbjct: 261 DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMV 320
Query: 431 EDGVR--------------------PC---------------YVAFMAVLTACSHAGLVD 455
++ V PC VA +++ A + LVD
Sbjct: 321 QEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVD 380
Query: 456 EGWKYFNSME-KDF----RIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWS 510
+ +SM KD + GL H AGR +EA +M P
Sbjct: 381 DAGTVLDSMTYKDVVSCSTMISGLAH----------AGRSDEAISIFCHMRDTPNAITVI 430
Query: 511 TLLAAC 516
+LL AC
Sbjct: 431 SLLNAC 436
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
Query: 271 VFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLK 330
+F G+S+ D Y KC + LR F + RD++SWN I+ G + G ++G+ +F ++
Sbjct: 61 LFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRV 120
Query: 331 AKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKM 390
+P + VI AC L G+++HG +IR GF + +S++ MYA ++
Sbjct: 121 WGFEPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS- 177
Query: 391 ARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKML-EDGVRPCYVAFMAVLTACS 449
AR +FD++ RD+++W+ +I + + LF++M+ E P V +VL AC+
Sbjct: 178 ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
Query: 450 HAGLVDEG 457
+D G
Sbjct: 238 VMEDIDVG 245
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/398 (33%), Positives = 222/398 (55%), Gaps = 8/398 (2%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDK--LKPDSFTLSSIL 243
I R+VF+ + RD+V WN +++ NGM EA +++ MG DK + D FT SS+L
Sbjct: 193 IVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLL 252
Query: 244 PIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAI 303
+ +G +IH + + D+ + ++L++MYAK N + + F + R+ +
Sbjct: 253 SA----CRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVV 308
Query: 304 SWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCI 363
SWN++I G QNG+ + + F QML ++P +++F+SV+ +CA +A+ KQ+ +
Sbjct: 309 SWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMV 368
Query: 364 IRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAV 423
+ G D +A+SL+ Y++ GN+ A F I D+V+WT++I A HG A +++
Sbjct: 369 TKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESL 428
Query: 424 SLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADL 483
+FE ML+ ++P + F+ VL+ACSH GLV EG + F M + ++I EHY + DL
Sbjct: 429 QMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDL 487
Query: 484 LGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAY 543
LGRAG ++EA D +++M +P+ + C H+ E + K+L ++P Y
Sbjct: 488 LGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNY 547
Query: 544 VLMSNIYSAAKRWKDAAKLRIHMRSKGLK-KTPACSWI 580
++SN Y + W AA LR R KTP CSW+
Sbjct: 548 SILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 192/380 (50%), Gaps = 20/380 (5%)
Query: 166 GSANKVFDENPQRGKGCKC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQ---NGMFREAL 221
G N +F +N K E D K+FD MP R++V+WN +I G Q + R L
Sbjct: 66 GIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHL 125
Query: 222 D---MVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLI 278
+ R + D + D + ++ + + ++ G+++H ++ G + F +SL+
Sbjct: 126 GFCYLSRILFTD-VSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLV 184
Query: 279 DMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQML--KAKVKPM 336
Y KC + + R F + RD + WN++++ V NG D+ G + M K + +
Sbjct: 185 HFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGD 244
Query: 337 QVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFD 396
+FSS++ AC + GKQ+H + ++ + + +A++L++MYAK ++ AR F+
Sbjct: 245 YFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFE 300
Query: 397 KIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDE 456
+ R++V+W A+I+G A +G +A+ LF +ML + ++P + F +VL++C+ + E
Sbjct: 301 SMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWE 360
Query: 457 GWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAAC 516
K +M A L ++ R G L EA ++ +P W++++ A
Sbjct: 361 -IKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR-EPDLVSWTSVIGAL 418
Query: 517 RAH----KSVELAEKVVDKI 532
+H +S+++ E ++ K+
Sbjct: 419 ASHGFAEESLQMFESMLQKL 438
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 130/281 (46%), Gaps = 37/281 (13%)
Query: 143 DFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVV 202
FD+ A AL+NMY K +L R+ F+ M R+VV
Sbjct: 273 QFDIPVATALLNMYAKSNHLS------------------------DARECFESMVVRNVV 308
Query: 203 SWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYA 262
SWN +I G AQNG REA+ + +M + L+PD T +S+L A+ + + ++
Sbjct: 309 SWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMV 368
Query: 263 IRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGI 322
+ G + + +SLI Y++ + +L F+ + D +SW S+I +G ++ +
Sbjct: 369 TKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESL 428
Query: 323 GFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLG------FDDNKFIAS 376
F ML+ K++P +++F V+ AC+H + G + C R+ +D + +
Sbjct: 429 QMFESMLQ-KLQPDKITFLEVLSACSHGGLVQEGLR---CFKRMTEFYKIEAEDEHY--T 482
Query: 377 SLVDMYAKCGNIKMARYIFDKIETRDMV-AWTAIIMGCAMH 416
L+D+ + G I A + + + T A A GC +H
Sbjct: 483 CLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIH 523
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 153/326 (46%), Gaps = 31/326 (9%)
Query: 248 EHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNS 307
+H+ VK + HG+ ++ G +F+ + L+ Y K + + + F +P R+ ++WN
Sbjct: 50 DHLSDVK--QEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNI 107
Query: 308 IIAGCVQ-----NGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGC 362
+I G +Q N + G + ++L V VSF +I C T + G QLH
Sbjct: 108 LIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCL 167
Query: 363 IIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDA 422
+++ G + + F ++SLV Y KCG I AR +F+ + RD+V W A++ ++G +A
Sbjct: 168 MVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEA 227
Query: 423 VSLFEKMLEDG--VRPCYVAFMAVLTACS-------HAGLVDEGWKYFNSMEKDFRIAPG 473
L + M D R Y F ++L+AC HA L +++ D +A
Sbjct: 228 FGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAILFKVSYQF------DIPVA-- 279
Query: 474 LEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKIL 533
A+ ++ ++ L +A + +M ++ S W+ ++ + A ++ ++L
Sbjct: 280 ----TALLNMYAKSNHLSDARECFESMVVRNVVS-WNAMIVGFAQNGEGREAMRLFGQML 334
Query: 534 L--VDPENMGAYVLMSNIYSAAKRWK 557
L + P+ + ++S+ + W+
Sbjct: 335 LENLQPDELTFASVLSSCAKFSAIWE 360
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/413 (32%), Positives = 217/413 (52%), Gaps = 34/413 (8%)
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKP-DSFTLSSILPIFAEHVDVVKGMEIH 259
++S ++ A G +AL++ +M P D+ S L A V G +H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFD 319
++++ F + F+G +L+DMY KC V H+ + F +P R+A+ WN++I+ GK
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 320 QG---------------------------------IGFFRQMLKAKVKPMQVSFSSVIPA 346
+ I F+R+M++ + KP ++ +++ A
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 347 CAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAW 406
C+ + A L K++H R + + + S LV+ Y +CG+I + +FD +E RD+VAW
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAW 251
Query: 407 TAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEK 466
+++I A+HG A A+ F++M V P +AF+ VL ACSHAGL DE YF M+
Sbjct: 252 SSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQG 311
Query: 467 DFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAE 526
D+ + +HY+ + D+L R GR EEAY I M +PT W LL ACR + +ELAE
Sbjct: 312 DYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAE 371
Query: 527 KVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSW 579
++L+V+PEN YVL+ IY + R ++A +LR+ M+ G+K +P SW
Sbjct: 372 IAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 139/290 (47%), Gaps = 25/290 (8%)
Query: 147 YTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDS-------VRKVFDLMPAR 199
+ AL++MY K ++ A K+FDE PQR + S V++ +L A
Sbjct: 84 FVGCALLDMYGKCLSVS---HARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAM 140
Query: 200 DVV----SWNTVIAG--NAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVV 253
DV+ S+N +I G ++G +R A++ R+M + + KP+ TL +++ +
Sbjct: 141 DVMPNESSFNAIIKGLVGTEDGSYR-AIEFYRKMIEFRFKPNLITLLALVSACSAIGAFR 199
Query: 254 KGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCV 313
EIH YA R+ + + S L++ Y +C + + F + RD ++W+S+I+
Sbjct: 200 LIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYA 259
Query: 314 QNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHL----TALNLGKQLHGCIIRLGFD 369
+G + + F++M AKV P ++F +V+ AC+H AL K++ G G
Sbjct: 260 LHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQG---DYGLR 316
Query: 370 DNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMV-AWTAIIMGCAMHGH 418
+K S LVD+ ++ G + A + + + W A++ C +G
Sbjct: 317 ASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGE 366
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 253 bits (647), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 165/522 (31%), Positives = 261/522 (50%), Gaps = 48/522 (9%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
MR LGI +++ A + L+ ++ + L++MYC
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLC 223
Query: 162 LGGFGSANKVFDENPQR----------GKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGN 211
L A K+FDE P+R G I+ ++FD + +D+VSW T+I G
Sbjct: 224 LK---DARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGC 280
Query: 212 AQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDV 271
+ EAL EM +KP + +L A V KG+++HG ++ GFD
Sbjct: 281 LRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYD 340
Query: 272 FIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGK-------FDQ---- 320
F+ +++I YA N ++ +L+ F S N++IAG V+NG FDQ
Sbjct: 341 FLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDK 400
Query: 321 --------------------GIGFFRQMLKA-KVKPMQVSFSSVIPACAHLTALNLGKQL 359
+ FR+M+ + +VKP ++ SV A + L +L GK+
Sbjct: 401 DIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRA 460
Query: 360 HGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDK---IETRDMVAWTAIIMGCAMH 416
H + N + ++++DMYAKCG+I+ A IF + I + + W AII G A H
Sbjct: 461 HDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATH 520
Query: 417 GHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEH 476
GHA A+ L+ + ++P + F+ VL+AC HAGLV+ G YF SM+ D I P ++H
Sbjct: 521 GHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKH 580
Query: 477 YAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVD 536
Y + DLLG+AGRLEEA + I M ++ +W LL+A R H +VE+AE ++ +D
Sbjct: 581 YGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAID 640
Query: 537 PENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACS 578
P + G V++SN+Y+ A RW+D A +R MR++ ++ + A S
Sbjct: 641 PSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWSRAFS 682
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 208/464 (44%), Gaps = 87/464 (18%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGC-KCEIDS-VR-------- 190
GLD + Y N+++NMY K + L A VF ++ + +D VR
Sbjct: 71 GLDSNGYICNSVLNMYAKCRLLA---DAESVFRDHAKLDSASFNIMVDGYVRSRRLWDAL 127
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHV 250
K+FD+MP R VS+ T+I G AQN + EA+++ REM + + + TL++++ +
Sbjct: 128 KLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLG 187
Query: 251 DVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR---------- 300
+ + AI+ +G VF+ ++L+ MY C ++ + + F +P R
Sbjct: 188 GIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLN 247
Query: 301 ---------------------DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVS 339
D +SW ++I GC++ + D+ + ++ +ML+ +KP +V
Sbjct: 248 GYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVM 307
Query: 340 FSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYA---------------- 383
++ A A + G QLHG I++ GFD F+ ++++ YA
Sbjct: 308 MVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASV 367
Query: 384 ---------------KCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEK 428
K G ++ AR +FD+ +D+ +W A+I G A A+ LF +
Sbjct: 368 KDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFRE 427
Query: 429 MLEDG-VRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRA 487
M+ V+P + ++V +A S G ++EG + + + I P AA+ D+ +
Sbjct: 428 MISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFS-TIPPNDNLTAAIIDMYAKC 486
Query: 488 GRLEEAYDF------ISNMGIQPTGSVWSTLLAACRAHKSVELA 525
G +E A + IS+ I P W+ ++ H +LA
Sbjct: 487 GSIETALNIFHQTKNISSSTISP----WNAIICGSATHGHAKLA 526
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 123/257 (47%), Gaps = 35/257 (13%)
Query: 239 LSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCN------------- 285
L S L A DV G +IH ++ G D + +I +S+++MYAKC
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 103
Query: 286 ------------------RVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQ 327
R+ +L+ F ++P R +S+ ++I G QN ++ + + FR+
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 328 MLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGN 387
M + +V+ ++VI AC+HL + + L I+L + F++++L+ MY C
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLC 223
Query: 388 IKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTA 447
+K AR +FD++ R++V W ++ G + G A LF+++ E + V++ ++
Sbjct: 224 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDI----VSWGTMIDG 279
Query: 448 CSHAGLVDEGWKYFNSM 464
C +DE Y+ M
Sbjct: 280 CLRKNQLDEALVYYTEM 296
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/458 (32%), Positives = 240/458 (52%), Gaps = 35/458 (7%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP 244
++D K + WN VI G + + +++ + +M L PD T ++
Sbjct: 57 DVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMK 116
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPY----- 299
+ + G +H ++ G + D+FI ++LI MY + + F +P+
Sbjct: 117 SSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVT 176
Query: 300 --------------------------RDAISWNSIIAGCVQNGKFDQGIGFFRQMLK-AK 332
RD ++W+S+I G V+ G++++ + F QM++
Sbjct: 177 WNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGS 236
Query: 333 VKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMAR 392
K +V+ SVI ACAHL ALN GK +H I+ + + +SL+DMYAKCG+I A
Sbjct: 237 SKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAW 296
Query: 393 YIFDK--IETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSH 450
+F + ++ D + W AII G A HG +++ LF KM E + P + F+ +L ACSH
Sbjct: 297 SVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSH 356
Query: 451 AGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWS 510
GLV E W +F S+ K+ P EHYA + D+L RAG +++A+DFIS M I+PTGS+
Sbjct: 357 GGLVKEAWHFFKSL-KESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLG 415
Query: 511 TLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKG 570
LL C H ++ELAE V K++ + P N G YV ++N+Y+ K+++ A +R M KG
Sbjct: 416 ALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKG 475
Query: 571 LKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNI 608
+KK S +++ H F+A DK+H + DKI L +
Sbjct: 476 VKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVLQL 513
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 163/346 (47%), Gaps = 21/346 (6%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M G+ P +P L+K+S+ GL++DL+ N L++MY ++
Sbjct: 99 MLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRD 158
Query: 162 LGGFGSANKVFDENPQR----------GKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGN 211
SA K+FDE P + ++ S R VFD M RDVV+W+++I G
Sbjct: 159 Q---ASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGY 215
Query: 212 AQNGMFREAL---DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFD 268
+ G + +AL D + MG K + T+ S++ A + +G +H Y +
Sbjct: 216 VKRGEYNKALEIFDQMMRMGSS--KANEVTMVSVICACAHLGALNRGKTVHRYILDVHLP 273
Query: 269 GDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR--DAISWNSIIAGCVQNGKFDQGIGFFR 326
V + +SLIDMYAKC + + FY + DA+ WN+II G +G + + F
Sbjct: 274 LTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFH 333
Query: 327 QMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCG 386
+M ++K+ P +++F ++ AC+H + + G + + +VD+ ++ G
Sbjct: 334 KMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAG 393
Query: 387 NIKMARYIFDKIETRDMVAWT-AIIMGCAMHGHALDAVSLFEKMLE 431
+K A ++ + + A++ GC HG+ A ++ +K++E
Sbjct: 394 LVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIE 439
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 149/458 (32%), Positives = 231/458 (50%), Gaps = 68/458 (14%)
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHV 250
K+FD +P DV N V+ G+AQ+ + + + EM + PD +T + +L ++
Sbjct: 67 KLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLE 126
Query: 251 DVVKGMEIHGYAIRHGFD----------------GDVFIGSSLID--------------- 279
G HG +RHGF GD+ I S L D
Sbjct: 127 WRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTS 186
Query: 280 MYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFD-------------------- 319
YAK +++ ++R F +PY+D ++WN +I GC++ + D
Sbjct: 187 GYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAM 246
Query: 320 -----------QGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGF 368
+ +G F++M A P V+ S++ ACA L L GK+LH I+
Sbjct: 247 ISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETAS 306
Query: 369 DDNKF-----IASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAV 423
+ I ++L+DMYAKCG+I A +F ++ RD+ W +I+G A+H HA ++
Sbjct: 307 VSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSI 365
Query: 424 SLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADL 483
+FE+M V P V F+ V+ ACSH+G VDEG KYF+ M + I P ++HY + D+
Sbjct: 366 EMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDM 425
Query: 484 LGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAY 543
LGRAG+LEEA+ F+ +M I+P VW TLL AC+ + +VEL + +K+L + + G Y
Sbjct: 426 LGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDY 485
Query: 544 VLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIE 581
VL+SNIY++ +W K+R +KK S IE
Sbjct: 486 VLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 168/375 (44%), Gaps = 48/375 (12%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M G+SP R+ F +LKA + G + Y NAL+ + +
Sbjct: 103 MEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGD 162
Query: 162 LG----------------------GFGSANKV------FDENPQRGK--------GC-KC 184
LG G+ K+ FDE P + + GC KC
Sbjct: 163 LGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKC 222
Query: 185 -EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSIL 243
E+DS R++FD +DVV+WN +I+G G +EAL + +EM D PD T+ S+L
Sbjct: 223 KEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLL 282
Query: 244 PIFAEHVDVVKGMEIHGYAIRHG-FDGDVFIGS----SLIDMYAKCNRVEHSLRAFYLLP 298
A D+ G +H Y + +++G+ +LIDMYAKC ++ ++ F +
Sbjct: 283 SACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVK 342
Query: 299 YRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQ 358
RD +WN++I G + + I F +M + KV P +V+F VI AC+H ++ G++
Sbjct: 343 DRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRK 401
Query: 359 LHGCIIRL-GFDDNKFIASSLVDMYAKCGNIKMARYIFD--KIETRDMVAWTAIIMGCAM 415
+ + + N +VDM + G ++ A + KIE + + W ++ C +
Sbjct: 402 YFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEP-NAIVWRTLLGACKI 460
Query: 416 HGHALDAVSLFEKML 430
+G+ EK+L
Sbjct: 461 YGNVELGKYANEKLL 475
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 129/280 (46%), Gaps = 20/280 (7%)
Query: 257 EIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLR----AFYLLPYRDAISWNSIIAGC 312
+IH + +G ++ + LI Y+ V +L+ F +P D N ++ G
Sbjct: 30 QIHASMVVNGLMSNLSVVGELI--YSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGS 87
Query: 313 VQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNK 372
Q+ K ++ + + +M K V P + +F+ V+ AC+ L + G HG ++R GF N+
Sbjct: 88 AQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNE 147
Query: 373 FIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLED 432
++ ++L+ +A CG++ +A +FD VAW+++ G A G +A+ LF++M
Sbjct: 148 YVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK 207
Query: 433 GVRPCYVAFMAVLTACSHAGLVDEGWKYFNSM-EKDFRIAPGLEHYAAVADLLGRAGRLE 491
VA+ ++T C +D + F+ EKD + + A+ G +
Sbjct: 208 D----QVAWNVMITGCLKCKEMDSARELFDRFTEKD------VVTWNAMISGYVNCGYPK 257
Query: 492 EAYDFISNM---GIQPTGSVWSTLLAACRAHKSVELAEKV 528
EA M G P +LL+AC +E +++
Sbjct: 258 EALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRL 297
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/432 (30%), Positives = 237/432 (54%), Gaps = 25/432 (5%)
Query: 142 LDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDV 201
D N+L++MYCK + L A K+F + G +
Sbjct: 362 FSLDSTVCNSLLSMYCKFELLS---VAEKLFCRISEEG--------------------NK 398
Query: 202 VSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGY 261
+WNT++ G + + +++ R++ + ++ DS + +S++ + V+ G +H Y
Sbjct: 399 EAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCY 458
Query: 262 AIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQG 321
++ D + + +SLID+Y K + + R F + I+WN++IA V + ++
Sbjct: 459 VVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKA 517
Query: 322 IGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDM 381
I F +M+ KP ++ +++ AC + +L G+ +H I + N ++++L+DM
Sbjct: 518 IALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDM 577
Query: 382 YAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAF 441
YAKCG+++ +R +FD +D V W +I G MHG A++LF++M E V+P F
Sbjct: 578 YAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTF 637
Query: 442 MAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMG 501
+A+L+AC+HAGLV++G K F M + + + P L+HY+ + DLL R+G LEEA + +M
Sbjct: 638 LALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMP 696
Query: 502 IQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAK 561
P G +W TLL++C H E+ ++ ++ + DP+N G Y++++N+YSAA +W++A +
Sbjct: 697 FSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAER 756
Query: 562 LRIHMRSKGLKK 573
R MR G+ K
Sbjct: 757 AREMMRESGVGK 768
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 138/271 (50%), Gaps = 4/271 (1%)
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHV 250
+VF L+ RD+ WN++I + NG + +L M PD FT ++ AE +
Sbjct: 80 RVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELL 139
Query: 251 DVVKGMEIHGYAIRH-GFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSII 309
G +HG ++H GFD + +G+S + Y+KC ++ + F +P RD ++W +II
Sbjct: 140 WFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAII 199
Query: 310 AGCVQNGKFDQGIGFFRQMLKAKV---KPMQVSFSSVIPACAHLTALNLGKQLHGCIIRL 366
+G VQNG+ + G+G+ +M A KP + AC++L AL G+ LHG ++
Sbjct: 200 SGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKN 259
Query: 367 GFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLF 426
G +KF+ SS+ Y+K GN A F ++ DM +WT+II A G ++ +F
Sbjct: 260 GLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMF 319
Query: 427 EKMLEDGVRPCYVAFMAVLTACSHAGLVDEG 457
+M G+ P V ++ LV +G
Sbjct: 320 WEMQNKGMHPDGVVISCLINELGKMMLVPQG 350
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 161/351 (45%), Gaps = 17/351 (4%)
Query: 192 VFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREM---GDDKLKPDSFTLSSILPIFAE 248
VFD MP RDVV+W +I+G+ QNG L + +M G D KP+ TL +
Sbjct: 183 VFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSN 242
Query: 249 HVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSI 308
+ +G +HG+A+++G F+ SS+ Y+K + +F L D SW SI
Sbjct: 243 LGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSI 302
Query: 309 IAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGF 368
IA ++G ++ F +M + P V S +I + + GK HG +IR F
Sbjct: 303 IASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCF 362
Query: 369 DDNKFIASSLVDMYAKCGNIKMARYIFDKI-ETRDMVAWTAIIMGCAMHGHALDAVSLFE 427
+ + +SL+ MY K + +A +F +I E + AW ++ G + + LF
Sbjct: 363 SLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFR 422
Query: 428 KMLEDGVRPCYVAFMAVLTACSHAGLVDEGWK---YFNSMEKDFRIAPGLEHYAAVADLL 484
K+ G+ + +V+++CSH G V G Y D I+ ++ DL
Sbjct: 423 KIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISV----VNSLIDLY 478
Query: 485 GRAGRLEEAYDFISNMGIQPTGSVWSTLLAA---C-RAHKSVELAEKVVDK 531
G+ G L A+ W+ ++A+ C ++ K++ L +++V +
Sbjct: 479 GKMGDLTVAWRMFCEADTNVI--TWNAMIASYVHCEQSEKAIALFDRMVSE 527
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 131/288 (45%), Gaps = 37/288 (12%)
Query: 263 IRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGI 322
I G ++F+ S LI YA + S R F+L+ RD WNSII NG + + +
Sbjct: 51 ITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSL 110
Query: 323 GFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRL-GFDDNKFIASSLVDM 381
FF ML + P + V+ ACA L ++G +HG +++ GFD N + +S V
Sbjct: 111 CFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYF 170
Query: 382 YAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGV---RPCY 438
Y+KCG ++ A +FD++ RD+VAWTAII G +G + + KM G +P
Sbjct: 171 YSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNP 230
Query: 439 VAFMAVLTACSHAGLVDEG--------------WKYFNSMEKDFRIAPG--LEHYAAVAD 482
ACS+ G + EG K+ S F G E Y + +
Sbjct: 231 RTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRE 290
Query: 483 L--------------LGRAGRLEEAYDF---ISNMGIQPTGSVWSTLL 513
L L R+G +EE++D + N G+ P G V S L+
Sbjct: 291 LGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLI 338
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 214/387 (55%), Gaps = 5/387 (1%)
Query: 198 ARDVVSWNTVIAGNAQNGMFREALDMVREMG-DDKLKPDSFTLSSILPIFAEHVDVVKGM 256
RD+ SWN+VI+G A +G E+L + M + K++ D TL + V++G
Sbjct: 542 TRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGR 601
Query: 257 EIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNG 316
HG AI+ + D + ++LI MY +C +E +++ F L+ + SWN +I+ QN
Sbjct: 602 CFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNK 661
Query: 317 KFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIAS 376
+ FR + K++P +++F ++ A L + + G Q H +IR GF N F+++
Sbjct: 662 AGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSA 718
Query: 377 SLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDG-VR 435
+LVDMY+ CG ++ +F + AW ++I HG A+ LF+++ + +
Sbjct: 719 ALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEME 778
Query: 436 PCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYD 495
P +F+++L+ACSH+G +DEG Y+ ME+ F + P EH + D+LGRAG+L EAY+
Sbjct: 779 PNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYE 838
Query: 496 FISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKR 555
FI+ +G VW LL+AC H +L ++V + + ++P+N Y+ ++N Y
Sbjct: 839 FITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGG 898
Query: 556 WKDAAKLRIHMRSKGLKKTPACSWIEI 582
W++A +LR + LKK P S I++
Sbjct: 899 WEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 149/314 (47%), Gaps = 30/314 (9%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
GL D NALMN+Y K +NL S VF M RD
Sbjct: 218 GLVGDSSLCNALMNLYAKGENL------------------------SSAECVFTHMEHRD 253
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
+VSWNT++ NG R++L + M + D+ T S ++ + ++ G +HG
Sbjct: 254 IVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHG 313
Query: 261 YAIRHGF--DGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKF 318
I+ G+ + V +G+S+I MY+KC E + F L RD IS N+I+ G NG F
Sbjct: 314 LVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMF 373
Query: 319 DQGIGFFRQMLKA-KVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKF-IAS 376
++ G QM K++P + S+ C L+ G+ +HG +R+ + +
Sbjct: 374 EEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVIN 433
Query: 377 SLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLED--GV 434
S++DMY KCG A +F RD+V+W ++I + +G A +LF++++ +
Sbjct: 434 SVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCS 493
Query: 435 RPCYVAFMAVLTAC 448
+ +A+LT+C
Sbjct: 494 KFSLSTVLAILTSC 507
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 178/357 (49%), Gaps = 14/357 (3%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP 244
E+ S +FD + +DV+ WN++I QNG + A+ + EM + DS TL
Sbjct: 137 ELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAAS 196
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS 304
+ K +H AI G GD + ++L+++YAK + + F + +RD +S
Sbjct: 197 ALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVS 256
Query: 305 WNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCII 364
WN+I+ C+ NG + + +F+ M + + V+FS VI AC+ + L LG+ LHG +I
Sbjct: 257 WNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVI 316
Query: 365 RLGFDDNKFIA--SSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDA 422
+ G+ ++ +S++ MY+KCG+ + A +F+++ RD+++ AI+ G A +G +A
Sbjct: 317 KSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEA 376
Query: 423 VSLFEKMLE-DGVRPCYVAFMAVLTACSHAGLVDEGWK---YFNSMEKDFRIAPGLEHYA 478
+ +M D ++P +++ + C EG Y ME R LE
Sbjct: 377 FGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSR---ALEVIN 433
Query: 479 AVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACR----AHKSVELAEKVVDK 531
+V D+ G+ G +A + + W+++++A HK+ L ++VV +
Sbjct: 434 SVIDMYGKCGLTTQA-ELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSE 489
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 170/350 (48%), Gaps = 36/350 (10%)
Query: 183 KC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGD-DKLKPDSFTLS 240
KC + ++ VF+ + RDV+S N ++ G A NGMF EA ++ +M DK++PD T+
Sbjct: 338 KCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVV 397
Query: 241 SILPIFAEHVDVVKGMEIHGYAIRHGFDGDVF-IGSSLIDMYAKCNRVEHSLRAFYLLPY 299
SI I + +G +HGY +R + +S+IDMY KC + F +
Sbjct: 398 SITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTH 457
Query: 300 RDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVI---PACAHLTALNLG 356
RD +SWNS+I+ QNG + F++++ ++ + S S+V+ +C +L G
Sbjct: 458 RDLVSWNSMISAFSQNGFTHKAKNLFKEVV-SEYSCSKFSLSTVLAILTSCDSSDSLIFG 516
Query: 357 KQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMH 416
K +H + +LG + F+ + ETRD+ +W ++I GCA
Sbjct: 517 KSVHCWLQKLGDLTSAFLRLETMS------------------ETRDLTSWNSVISGCASS 558
Query: 417 GHALDAVSLFEKMLEDG-VRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFR-IAPGL 474
GH L+++ F+ M +G +R + + ++A + GLV +G + K R + L
Sbjct: 559 GHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQL 618
Query: 475 EHYAAVADLLGRAGRLEEA---YDFISNMGIQPTGSVWSTLLAACRAHKS 521
++ + + GR +E A + IS+ P W+ +++A +K+
Sbjct: 619 QN--TLITMYGRCKDIESAVKVFGLISD----PNLCSWNCVISALSQNKA 662
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 120/242 (49%), Gaps = 13/242 (5%)
Query: 182 CKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
CK +I+S KVF L+ ++ SWN VI+ +QN RE + R + KL+P+ T
Sbjct: 629 CK-DIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVG 684
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
+L + GM+ H + IR GF + F+ ++L+DMY+ C +E ++ F
Sbjct: 685 LLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNS 744
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQM-LKAKVKPMQVSFSSVIPACAHLTALNLG---- 356
+WNS+I+ +G ++ + F+++ ++++P + SF S++ AC+H ++ G
Sbjct: 745 ISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYY 804
Query: 357 KQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKI-ETRDMVAWTAIIMGCAM 415
KQ+ + G +VDM + G ++ A I E + W A++ C
Sbjct: 805 KQMEE---KFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNY 861
Query: 416 HG 417
HG
Sbjct: 862 HG 863
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 101/229 (44%)
Query: 221 LDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDM 280
D + E + ++ L +L F + +H +A++ G D+ S L+
Sbjct: 72 FDELPERENRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTF 131
Query: 281 YAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSF 340
Y + + S F L +D I WNS+I QNG++ +G F +M+ + +
Sbjct: 132 YGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTL 191
Query: 341 SSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIET 400
A + L LH I G + + ++L+++YAK N+ A +F +E
Sbjct: 192 LLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEH 251
Query: 401 RDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACS 449
RD+V+W I+ C +GH ++ F+ M G V F V++ACS
Sbjct: 252 RDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACS 300
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 247 bits (630), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 161/499 (32%), Positives = 253/499 (50%), Gaps = 38/499 (7%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M GI P+ H S+L+A GL +Y L+ +Y +
Sbjct: 95 MHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSR--- 151
Query: 162 LGGFGSANKVFDENPQR----------GKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGN 211
LG A K FD+ ++ G E+D R+VFD +P +D VSWN +I+
Sbjct: 152 LGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSY 211
Query: 212 AQNGMFREALDMVREMGDDKLK-PDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFD-- 268
A+ G A + M LK P S+ + + +V+ + M++ R FD
Sbjct: 212 AKKGDMGNACSLFSAM---PLKSPASWNI-----LIGGYVNC-REMKL----ARTYFDAM 258
Query: 269 ----GDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGF 324
G +I ++I Y K V+ + F L+ +D + ++++IA QNGK +
Sbjct: 259 PQKNGVSWI--TMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKL 316
Query: 325 FRQMLK--AKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMY 382
F QML+ + ++P +++ SSV+ A + L + G + I G + +++SL+D+Y
Sbjct: 317 FAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLY 376
Query: 383 AKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFM 442
K G+ A +F + +D V+++A+IMGC ++G A +A SLF M+E + P V F
Sbjct: 377 MKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFT 436
Query: 443 AVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGI 502
+L+A SH+GLV EG+K FNSM KD + P +HY + D+LGRAGRLEEAY+ I +M +
Sbjct: 437 GLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPM 495
Query: 503 QPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKL 562
QP VW LL A H +VE E + ++ + G ++ IYS+ RW DA +
Sbjct: 496 QPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTV 555
Query: 563 RIHMRSKGLKKTPACSWIE 581
R ++ K L KT CSW+E
Sbjct: 556 RDSIKEKKLCKTLGCSWVE 574
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/419 (21%), Positives = 191/419 (45%), Gaps = 36/419 (8%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
+ V+++ D SW ++ +Q+ F+E +D+ +M + + P S ++S+L
Sbjct: 54 VTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRA 113
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISW 305
+ ++V G IH A+++G G V++ + L+ +Y++ +E + +AF + ++ +SW
Sbjct: 114 CGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSW 173
Query: 306 NSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIP------ACAHLTALNLGKQL 359
NS++ G +++G+ D+ F ++ + + SS AC+ +A+ L
Sbjct: 174 NSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPA 233
Query: 360 HGCII-------------RLGFD----DNKFIASSLVDMYAKCGNIKMARYIFDKIETRD 402
I+ R FD N +++ Y K G+++ A +F + +D
Sbjct: 234 SWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKD 293
Query: 403 MVAWTAIIMGCAMHGHALDAVSLFEKMLEDG--VRPCYVAFMAVLTACSHAGLVDEG-WK 459
+ + A+I +G DA+ LF +MLE ++P + +V++A S G G W
Sbjct: 294 KLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWV 353
Query: 460 YFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAAC--- 516
E +I L ++ DL + G +A+ SN+ + T S +S ++ C
Sbjct: 354 ESYITEHGIKIDDLLS--TSLIDLYMKGGDFAKAFKMFSNLNKKDTVS-YSAMIMGCGIN 410
Query: 517 -RAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKT 574
A ++ L +++K + P N+ + + + YS + ++ K M+ L+ +
Sbjct: 411 GMATEANSLFTAMIEKKI---PPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPS 466
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 246 bits (628), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 133/400 (33%), Positives = 231/400 (57%), Gaps = 8/400 (2%)
Query: 217 FREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHG-FDGDVFIGS 275
R L MV+E +D + P T ++ + G +IH + +++G F D + +
Sbjct: 98 LRYFLLMVKEEEED-IAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQT 156
Query: 276 SLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKP 335
++ +Y + + + + F +P D + W+ ++ G V+ G +G+ FR+ML ++P
Sbjct: 157 GVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEP 216
Query: 336 MQVSFSSVIPACAHLTALNLGKQLHGCIIRLGF-DDNKFIASSLVDMYAKCGNIKMARYI 394
+ S ++ + ACA + AL GK +H + + + + + F+ ++LVDMYAKCG I+ A +
Sbjct: 217 DEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEV 276
Query: 395 FDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM-LEDGVRPCYVAFMAVLTACSHAGL 453
F K+ R++ +W A+I G A +G+A A++ E++ EDG++P V + VL AC+H G
Sbjct: 277 FKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGF 336
Query: 454 VDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLL 513
++EG +ME + I P EHY+ + DL+ RAGRL++A + I M ++P SVW LL
Sbjct: 337 LEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALL 396
Query: 514 AACRAHKSVELAEKVVDKILLVDPENM----GAYVLMSNIYSAAKRWKDAAKLRIHMRSK 569
CR HK+VEL E V +L ++ N+ A V +SNIY + +R +A+K+R + +
Sbjct: 397 NGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQR 456
Query: 570 GLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNIL 609
G++KTP S +E+ V F++GD SHP +I+ +++L
Sbjct: 457 GVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVIHLL 496
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 119/231 (51%), Gaps = 4/231 (1%)
Query: 190 RKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEH 249
RKVFD +P DVV W+ ++ G + G+ E L++ REM L+PD F++++ L A+
Sbjct: 172 RKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQV 231
Query: 250 VDVVKGMEIHGYAIRHGF-DGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSI 308
+ +G IH + + + + DVF+G++L+DMYAKC +E ++ F L R+ SW ++
Sbjct: 232 GALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAAL 291
Query: 309 IAGCVQNGKFDQGIGFFRQMLKAK-VKPMQVSFSSVIPACAHLTALNLGKQ-LHGCIIRL 366
I G G + + ++ + +KP V V+ ACAH L G+ L R
Sbjct: 292 IGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARY 351
Query: 367 GFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVA-WTAIIMGCAMH 416
S +VD+ + G + A + +K+ + + + W A++ GC H
Sbjct: 352 EITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTH 402
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/436 (30%), Positives = 240/436 (55%), Gaps = 39/436 (8%)
Query: 182 CKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
C C + R+VFD +P + ++N +I+G ++G+ +E L +V+ M K D +TLS
Sbjct: 82 CGC-LSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSM 140
Query: 242 ILPIFAEHVDVVKGME-----IHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYL 296
+L + +H I+ + D + ++L+D Y K ++E + F
Sbjct: 141 VLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFET 200
Query: 297 LP-------------------------------YRDAISWNSIIAGCVQNGKF-DQGIGF 324
+ +D + +N+++ G ++G+ + +
Sbjct: 201 MKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDM 260
Query: 325 FRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAK 384
+ M +A P +F+SVI AC+ LT+ +G+Q+H I++ G + + SSL+DMYAK
Sbjct: 261 YISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAK 320
Query: 385 CGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAV 444
CG I AR +FD+++ +++ +WT++I G +G+ +A+ LF +M E + P YV F+
Sbjct: 321 CGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGA 380
Query: 445 LTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQP 504
L+ACSH+GLVD+G++ F SM++D+ + P +EHYA + DL+GRAG L +A++F M +P
Sbjct: 381 LSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERP 440
Query: 505 TGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENM-GAYVLMSNIYSAAKRWKDAAKLR 563
+W+ LL++C H +VELA ++ ++ + GAY+ +SN+Y++ +W + +K+R
Sbjct: 441 DSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIR 500
Query: 564 IHMRSKGLKKTPACSW 579
M+ + + KT SW
Sbjct: 501 EVMKRRRISKTIGRSW 516
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 147/321 (45%), Gaps = 23/321 (7%)
Query: 142 LDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGC----------KCEIDSVRK 191
++ D AL++ Y K G SA VF+ C + ++ +
Sbjct: 171 VELDDVLITALVDTYVKS---GKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEE 227
Query: 192 VFDLMPARDVVSWNTVIAGNAQNG-MFREALDMVREMGDDKLKPDSFTLSSILPIFAEHV 250
+F+ +D+V +N ++ G +++G + ++DM M P+ T +S++ +
Sbjct: 228 IFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLT 287
Query: 251 DVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIA 310
G ++H ++ G + +GSSL+DMYAKC + + R F + ++ SW S+I
Sbjct: 288 SHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMID 347
Query: 311 GCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIR-LGFD 369
G +NG ++ + F +M + +++P V+F + AC+H ++ G ++ + R
Sbjct: 348 GYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMK 407
Query: 370 DNKFIASSLVDMYAKCGNIKMA-RYIFDKIETRDMVAWTAIIMGCAMHGH----ALDAVS 424
+ +VD+ + G++ A + E D W A++ C +HG+ ++ A
Sbjct: 408 PKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASE 467
Query: 425 LFEKMLEDGVRP-CYVAFMAV 444
LF+ L RP Y+A V
Sbjct: 468 LFK--LNADKRPGAYLALSNV 486
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 140/325 (43%), Gaps = 46/325 (14%)
Query: 255 GMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQ 314
G +IH I+ GF D+ I L+ ++ KC + ++ + F LP ++N +I+G ++
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 315 NGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPAC-----AHLTALNLGKQLHGCIIRLGFD 369
+G + + ++M + K + S V+ A + +L + +H II+ +
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 370 DNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM 429
+ + ++LVD Y K G ++ AR +F+ ++ ++V T++I G G DA +F
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 430 LEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGR 489
+ V + A++ S +G A R
Sbjct: 233 KVKDI----VVYNAMVEGFSRSGET--------------------------------AKR 256
Query: 490 LEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKIL---LVDPENMGAYVLM 546
+ Y + G P S +++++ AC S E+ ++V +I+ + MG+ +L
Sbjct: 257 SVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLL- 315
Query: 547 SNIYSAAKRWKDAAKLRIHMRSKGL 571
++Y+ DA ++ M+ K +
Sbjct: 316 -DMYAKCGGINDARRVFDQMQEKNV 339
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query: 335 PMQVSFSSVIPACAHLTALN---------LGKQLHGCIIRLGFDDNKFIASSLVDMYAKC 385
P++ + SS+ PA AL GK++H II+ GF + I+ L+ ++ KC
Sbjct: 23 PLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKC 82
Query: 386 GNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVL 445
G + AR +FD++ + A+ +I G HG + + L ++M G + VL
Sbjct: 83 GCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVL 142
Query: 446 TACSHAG 452
A + G
Sbjct: 143 KASNSRG 149
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 155/489 (31%), Positives = 251/489 (51%), Gaps = 77/489 (15%)
Query: 184 CEIDSVRKVFDL---MPARDVVSWNTVIAGNAQNGMFREALDMVREMGD--DKLKPDSFT 238
C VR+ + L MP R++VSW +I+G A N ++REAL + EM D + P+ T
Sbjct: 242 CRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGET 301
Query: 239 LSSI-LPIFAEHVDVVK-GMEIHGYAIRHGF---DGDVFIGSSLIDMYA----------- 282
L S+ V+ + G ++H I +G+ D D + SL+ MYA
Sbjct: 302 LISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSL 361
Query: 283 --------KCNRVEHSL-------RAFYLL----PYRDAISWNSIIAGCVQNGKFDQGIG 323
CN + + RA L D +SW S+I G ++ G + G
Sbjct: 362 LNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFG 421
Query: 324 FFRQ-------------------------------MLKAKVKPMQVSFSSVIPACAHLTA 352
F++ M++ +KP+ ++S ++ + +
Sbjct: 422 LFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSN 481
Query: 353 LNLGKQLHGCIIRLG--FDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAII 410
L+ GK +H I + +D + + +SLV MYAKCG I+ A IF K+ +D V+W ++I
Sbjct: 482 LDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMI 541
Query: 411 MGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRI 470
MG + HG A A++LF++ML+ G +P V F+ VL+ACSH+GL+ G + F +M++ + I
Sbjct: 542 MGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSI 601
Query: 471 APGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAAC----RAHKSVELAE 526
PG++HY ++ DLLGRAG+L+EA +FIS + P +V+ LL C R + +AE
Sbjct: 602 QPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAE 661
Query: 527 KVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKV 586
+ ++L +DP N +V + N+Y+ R ++R M KG+KKTP CSW+ + +
Sbjct: 662 RAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRA 721
Query: 587 HTFLAGDKS 595
+ FL+GDKS
Sbjct: 722 NVFLSGDKS 730
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 168/359 (46%), Gaps = 47/359 (13%)
Query: 144 FDLYTANALMNMYCK-------------VQNLGGFGSANKVFDENPQRGKGCKCEIDSVR 190
FDL + N ++N Y K V++L S + D + G ++
Sbjct: 366 FDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAG-----DVSRAF 420
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHV 250
+F + +D V+W +I+G QN +F EA ++ +M LKP + T S +L
Sbjct: 421 GLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATS 480
Query: 251 DVVKGMEIHGYAIRHG--FDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSI 308
++ +G IH + +D D+ + +SL+ MYAKC +E + F + +D +SWNS+
Sbjct: 481 NLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSM 540
Query: 309 IAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCI----- 363
I G +G D+ + F++ML + KP V+F V+ AC+H + G +L +
Sbjct: 541 IMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYS 600
Query: 364 IRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIE-TRDMVAWTAIIMGCAMHGHALDA 422
I+ G D +I S++D+ + G +K A + T D + A++ C ++ DA
Sbjct: 601 IQPGID--HYI--SMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDA 656
Query: 423 VSLFE----KMLE-DGVR-PCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLE 475
+ E ++LE D V P +VA V +AGL + MEK+ R G++
Sbjct: 657 EGIAERAAMRLLELDPVNAPGHVALCNV-----YAGLGR------HDMEKEMRKEMGIK 704
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 187/406 (46%), Gaps = 46/406 (11%)
Query: 145 DLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSV---------RKVFDL 195
++ T NA++ Y K + + A +F E P+ + ++ ++FD
Sbjct: 107 NIVTCNAMLTGYVKCRRMN---EAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDE 163
Query: 196 MPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKG 255
MP R+VVSWNT++ G +NG +A +++ D D + ++++ + E+ G
Sbjct: 164 MPERNVVSWNTLVTGLIRNGDMEKA----KQVFDAMPSRDVVSWNAMIKGYIEN----DG 215
Query: 256 MEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQN 315
ME + +V +S++ Y + V + R F +P R+ +SW ++I+G N
Sbjct: 216 MEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWN 275
Query: 316 GKFDQGIGFFRQMLK--AKVKPMQVSFSSVIPACAHLTA--LNLGKQLHGCIIRLGF--- 368
+ + + F +M K V P + S+ AC L LG+QLH +I G+
Sbjct: 276 ELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETV 335
Query: 369 DDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFE- 427
D + +A SLV MYA G I A+ + + E+ D+ + II +G A +LFE
Sbjct: 336 DHDGRLAKSLVHMYASSGLIASAQSLLN--ESFDLQSCNIIINRYLKNGDLERAETLFER 393
Query: 428 -KMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSM-EKDFRIAPGLEHYAAVADLLG 485
K L D V++ +++ AG V + F + +KD G+ ++ L+
Sbjct: 394 VKSLHDK-----VSWTSMIDGYLEAGDVSRAFGLFQKLHDKD-----GVTWTVMISGLV- 442
Query: 486 RAGRLEEAYDFISNM---GIQPTGSVWSTLLAACRAHKSVELAEKV 528
+ EA +S+M G++P S +S LL++ A +++ + +
Sbjct: 443 QNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHI 488
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 142/442 (32%), Positives = 239/442 (54%), Gaps = 38/442 (8%)
Query: 142 LDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDV 201
++ +L TA A+++MY K G F A K F+ +P +D
Sbjct: 432 IESELETATAVISMYAKC---GRFSPALKAFER---------------------LPIKDA 467
Query: 202 VSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGY 261
V++N + G Q G +A D+ + M + PDS T+ +L A D +G ++G
Sbjct: 468 VAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQ 527
Query: 262 AIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPY-RDAISWNSIIAGCVQNGKFDQ 320
I+HGFD + + +LI+M+ KC+ + ++ F + + +SWN ++ G + +G+ ++
Sbjct: 528 IIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEE 587
Query: 321 GIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVD 380
+ FRQM K +P V+F +++ A A L+AL +G +H +I+ GF + +SLVD
Sbjct: 588 AVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVD 647
Query: 381 MYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVA 440
MYAKCG I+ + F +I + +V+W ++ A HG A AVSLF M E+ ++P V+
Sbjct: 648 MYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVS 707
Query: 441 FMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM 500
F++VL+AC HAGLV+EG + F M + +I +EHYA + DLLG+AG EA + + M
Sbjct: 708 FLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRM 767
Query: 501 GIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAA 560
++ + VW LL + R H ++ L+ + +++ ++P N + YS +R +
Sbjct: 768 RVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLN-------PSHYSQDRRLGEVN 820
Query: 561 KLRIHMRSKGLKKTPACSWIEI 582
+ +KK PACSWIE+
Sbjct: 821 NV------SRIKKVPACSWIEV 836
Score = 159 bits (401), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 196/408 (48%), Gaps = 10/408 (2%)
Query: 182 CKC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLS 240
C C ++ + VF+ + +D SW T++A A NG F E L++ M + ++ + +
Sbjct: 245 CNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAA 304
Query: 241 SILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR 300
S L A D+VKG+ IH YA++ G GDV + +SL+ MY+KC +E + + F + R
Sbjct: 305 SALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDR 364
Query: 301 DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLH 360
D +SW+++IA Q G+ D+ I FR M++ +KP V+ +SV+ CA + A LGK +H
Sbjct: 365 DVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIH 424
Query: 361 GCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHAL 420
I+ + A++++ MYAKCG A F+++ +D VA+ A+ G G A
Sbjct: 425 CYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDAN 484
Query: 421 DAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEK-DFRIAPGLEHYAA 479
A +++ M GV P + +L C+ G + + K F + H A
Sbjct: 485 KAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAH--A 542
Query: 480 VADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPEN 539
+ ++ + L A G + + W+ ++ H E A + + V+
Sbjct: 543 LINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQ-MKVEKFQ 601
Query: 540 MGAYVLMSNIYSAAKRWKDAAKLRIHMR-SKGLKKTPACSWIEIGNKV 586
A ++ + +AA + + LR+ M L + CS +GN +
Sbjct: 602 PNAVTFVNIVRAAA----ELSALRVGMSVHSSLIQCGFCSQTPVGNSL 645
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 187/401 (46%), Gaps = 33/401 (8%)
Query: 106 GISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGF 165
GI P ++ F LKA GL+ D+Y AL+ MYCK ++L
Sbjct: 95 GIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDL--- 151
Query: 166 GSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVR 225
S R+VFD M +DVV+WNT+++G AQNG AL +
Sbjct: 152 ---------------------VSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFH 190
Query: 226 EMGDDKLKPDSFTLSSILPIFA--EHVDVVKGMEIHGYAIRHGFDGDVFIGSS-LIDMYA 282
+M + D +L +++P + E DV + + HG I+ GF +F SS LIDMY
Sbjct: 191 DMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCL--HGLVIKKGF---IFAFSSGLIDMYC 245
Query: 283 KCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSS 342
C + + F + +D SW +++A NG F++ + F M V+ +V+ +S
Sbjct: 246 NCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAAS 305
Query: 343 VIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRD 402
+ A A++ L G +H ++ G + +A+SL+ MY+KCG +++A +F IE RD
Sbjct: 306 ALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRD 365
Query: 403 MVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFN 462
+V+W+A+I G +A+SLF M+ ++P V +VL C+ G K +
Sbjct: 366 VVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLG-KSIH 424
Query: 463 SMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQ 503
I LE AV + + GR A + I+
Sbjct: 425 CYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIK 465
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 166/334 (49%), Gaps = 13/334 (3%)
Query: 187 DSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDK-LKPDSFTLSSILPI 245
D R +FD + VV WN++I G + G+ REAL M ++K + PD ++ + L
Sbjct: 50 DLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKA 109
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISW 305
A +D KG+ IH G + DV+IG++L++MY K + + + F + +D ++W
Sbjct: 110 CAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTW 169
Query: 306 NSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIR 365
N++++G QNG + F M V VS ++IPA + L ++ + LHG +I+
Sbjct: 170 NTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIK 229
Query: 366 LGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSL 425
GF +S L+DMY C ++ A +F+++ +D +W ++ A +G + + L
Sbjct: 230 KGFIFA--FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLEL 287
Query: 426 FEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLL- 484
F+ M VR VA + L A ++ G + +G D+ + GL +VA L
Sbjct: 288 FDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAI-----HDYAVQQGLIGDVSVATSLM 342
Query: 485 ---GRAGRLEEAYDFISNMGIQPTGSVWSTLLAA 515
+ G LE A N+ + S WS ++A+
Sbjct: 343 SMYSKCGELEIAEQLFINIEDRDVVS-WSAMIAS 375
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 135/282 (47%), Gaps = 33/282 (11%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G D + + A+AL+NM+ K L +A +FD KC + +
Sbjct: 532 GFDSECHVAHALINMFTKCDAL---AAAIVLFD---------KCGFE-----------KS 568
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
VSWN ++ G +G EA+ R+M +K +P++ T +I+ AE + GM +H
Sbjct: 569 TVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHS 628
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQ 320
I+ GF +G+SL+DMYAKC +E S + F + + +SWN++++ +G
Sbjct: 629 SLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASC 688
Query: 321 GIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIA----- 375
+ F M + ++KP VSF SV+ AC H + GK++ +G + +K A
Sbjct: 689 AVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFE---EMG-ERHKIEAEVEHY 744
Query: 376 SSLVDMYAKCGNIKMARYIFDKIETRDMVA-WTAIIMGCAMH 416
+ +VD+ K G A + ++ + V W A++ MH
Sbjct: 745 ACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMH 786
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 124/273 (45%), Gaps = 33/273 (12%)
Query: 256 MEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQN 315
+++HG I G + LI+ Y+ R + S F + + WNS+I G +
Sbjct: 22 LQVHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRA 77
Query: 316 GKFDQGIGFFRQMLKAK-VKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFI 374
G + +GFF M + K + P + SF+ + ACA G ++H I +G + + +I
Sbjct: 78 GLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYI 137
Query: 375 ASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGV 434
++LV+MY K ++ AR +FDK+ +D+V W ++ G A +G + A+ LF M V
Sbjct: 138 GTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCV 197
Query: 435 RPCYVAFMAVLTA-----------CSHAGLVDEGWKYFNSMEKDFRIAPGL-EHYAAVAD 482
+V+ ++ A C H ++ +G+ F + GL + Y AD
Sbjct: 198 DIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI--------FAFSSGLIDMYCNCAD 249
Query: 483 LLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAA 515
L EE + + S W T++AA
Sbjct: 250 LYAAESVFEEVW--------RKDESSWGTMMAA 274
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 242 bits (617), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 152/476 (31%), Positives = 237/476 (49%), Gaps = 55/476 (11%)
Query: 106 GISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGF 165
G+ PSLLKAS + D + ++L++MY K F
Sbjct: 112 GLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSK------F 165
Query: 166 GSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVR 225
G E+ + RKVF + +D+V +N +I+G A N EAL++V+
Sbjct: 166 G------------------EVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVK 207
Query: 226 EMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCN 285
+M +KPD T ++++ F+ + K EI G+ DV
Sbjct: 208 DMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDV-------------- 253
Query: 286 RVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIP 345
+SW SII+G V N + ++ F+QML + P + +++P
Sbjct: 254 -----------------VSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLP 296
Query: 346 ACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVA 405
AC L + GK++HG + G +D+ F+ S+L+DMY KCG I A +F K + V
Sbjct: 297 ACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVT 356
Query: 406 WTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSME 465
+ ++I A HG A AV LF++M G + ++ F A+LTACSHAGL D G F M+
Sbjct: 357 FNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQ 416
Query: 466 KDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELA 525
+RI P LEHYA + DLLGRAG+L EAY+ I M ++P VW LLAACR H ++ELA
Sbjct: 417 NKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELA 476
Query: 526 EKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIE 581
+ ++PEN G +L++++Y+ A W+ +++ ++ K ++ SW+E
Sbjct: 477 RIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVE 532
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 160/346 (46%), Gaps = 43/346 (12%)
Query: 190 RKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEH 249
RKVFD MP RD+ +I A+NG ++E+LD REM D LK D+F + S+L
Sbjct: 71 RKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNL 130
Query: 250 VDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSII 309
+D G IH ++ ++ D FI SSLIDMY+K V ++ + F L +D + +N++I
Sbjct: 131 LDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMI 190
Query: 310 AGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFD 369
+G N + D+ + + M +KP ++++++I +H+
Sbjct: 191 SGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMR------------------ 232
Query: 370 DNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM 429
N+ S ++++ G D+V+WT+II G + A F++M
Sbjct: 233 -NEEKVSEILELMCLDGY------------KPDVVSWTSIISGLVHNFQNEKAFDAFKQM 279
Query: 430 LEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHY----AAVADLLG 485
L G+ P + +L AC+ + G + + + GLE + +A+ D+ G
Sbjct: 280 LTHGLYPNSATIITLLPACTTLAYMKHGKEI-----HGYSVVTGLEDHGFVRSALLDMYG 334
Query: 486 RAGRLEEAYDFISNMGIQPTGSVWSTLLAACR---AHKSVELAEKV 528
+ G + EA + T + S + A K+VEL +++
Sbjct: 335 KCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQM 380
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 182/402 (45%), Gaps = 35/402 (8%)
Query: 234 PDSFTLSSILPIFAEHVDVV----------KGMEIHGYAIRHGFDGDVFIGSSLIDMYAK 283
P SF L SI +V+++ +G +H + + G I + L+ Y +
Sbjct: 8 PSSFRLLSI----GSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVE 63
Query: 284 CNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSV 343
C +V + + F +P RD +I C +NG + + + FFR+M K +K S+
Sbjct: 64 CGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSL 123
Query: 344 IPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDM 403
+ A +L GK +H +++ ++ + FI SSL+DMY+K G + AR +F + +D+
Sbjct: 124 LKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDL 183
Query: 404 VAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNS 463
V + A+I G A + A +A++L + M G++P + + A+++ SH ++ +
Sbjct: 184 VVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILEL 243
Query: 464 MEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM---GIQPTGSVWSTLLAACRAHK 520
M D P + + ++ L + E+A+D M G+ P + TLL AC
Sbjct: 244 MCLD-GYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLA 302
Query: 521 SVELAEKVVDKILLVDPENMG-AYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSW 579
++ +++ ++ E+ G + ++Y +A L +KTP +
Sbjct: 303 YMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMIL--------FRKTPKKTT 354
Query: 580 IEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLD 621
+ + + + +H DK E L +QME G LD
Sbjct: 355 VTFNSMIFCY----ANHGLADKAVE----LFDQMEATGEKLD 388
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 241 bits (616), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 132/400 (33%), Positives = 230/400 (57%), Gaps = 8/400 (2%)
Query: 217 FREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHG-FDGDVFIGS 275
R L MV+E +D + P T ++ + G +IH + +++G F D + +
Sbjct: 98 LRYFLLMVKEEEED-ITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQT 156
Query: 276 SLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKP 335
++ +Y + + + + F +P D + W+ ++ G V+ G +G+ F++ML ++P
Sbjct: 157 GVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEP 216
Query: 336 MQVSFSSVIPACAHLTALNLGKQLHGCIIRLGF-DDNKFIASSLVDMYAKCGNIKMARYI 394
+ S ++ + ACA + AL GK +H + + + + + F+ ++LVDMYAKCG I+ A +
Sbjct: 217 DEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEV 276
Query: 395 FDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM-LEDGVRPCYVAFMAVLTACSHAGL 453
F+K+ R++ +W A+I G A +G+A A + +++ EDG++P V + VL AC+H G
Sbjct: 277 FEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGF 336
Query: 454 VDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLL 513
++EG +ME + I P EHY+ + DL+ RAGRL++A D I M ++P SVW LL
Sbjct: 337 LEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALL 396
Query: 514 AACRAHKSVELAEKVVDKILLVDPENM----GAYVLMSNIYSAAKRWKDAAKLRIHMRSK 569
CR HK+VEL E V +L ++ N+ A V +SNIY + +R +A K+R + +
Sbjct: 397 NGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQR 456
Query: 570 GLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNIL 609
G++KTP S +E+ V F++GD SHP +I+ +++L
Sbjct: 457 GIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIHLL 496
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 119/231 (51%), Gaps = 4/231 (1%)
Query: 190 RKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEH 249
RKVFD +P DVV W+ ++ G + G+ E L++ +EM ++PD F++++ L A+
Sbjct: 172 RKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQV 231
Query: 250 VDVVKGMEIHGYAIRHGF-DGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSI 308
+ +G IH + + + + DVF+G++L+DMYAKC +E ++ F L R+ SW ++
Sbjct: 232 GALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAAL 291
Query: 309 IAGCVQNGKFDQGIGFFRQMLKAK-VKPMQVSFSSVIPACAHLTALNLGKQ-LHGCIIRL 366
I G G + ++ + +KP V V+ ACAH L G+ L R
Sbjct: 292 IGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARY 351
Query: 367 GFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVA-WTAIIMGCAMH 416
G S +VD+ + G + A + +K+ + + + W A++ GC H
Sbjct: 352 GITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTH 402
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 141/490 (28%), Positives = 244/490 (49%), Gaps = 53/490 (10%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
MR P + FP ++K + G D D+ + ++ Y K ++
Sbjct: 101 MRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKD 160
Query: 162 LGGFGSANKVFDENPQRGKGC----------KCEIDSVRKVFDLMPARDVVSWNTVIAGN 211
L SA KVF E P+R E++ + +FDLMP R++ SWN ++ G
Sbjct: 161 LF---SARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGL 217
Query: 212 AQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDV 271
++G A +++ D+ K D + +S++ +A+ D+V
Sbjct: 218 VKSGDLVNA----KKLFDEMPKRDIISYTSMIDGYAKGGDMV------------------ 255
Query: 272 FIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKA 331
S D++ + V D +W+++I G QNG+ ++ F +M
Sbjct: 256 ----SARDLFEEARGV-------------DVRAWSALILGYAQNGQPNEAFKVFSEMCAK 298
Query: 332 KVKPMQVSFSSVIPACAHLTALNLGKQLHGCI-IRLGFDDNKFIASSLVDMYAKCGNIKM 390
VKP + ++ AC+ + L +++ + R+ + ++ +L+DM AKCG++
Sbjct: 299 NVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDR 358
Query: 391 ARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSH 450
A +F+++ RD+V++ +++ G A+HG +A+ LFEKM+++G+ P VAF +L C
Sbjct: 359 AAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQ 418
Query: 451 AGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWS 510
+ LV+EG +YF M K + I +HY+ + +LL R G+L+EAY+ I +M + S W
Sbjct: 419 SRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWG 478
Query: 511 TLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKG 570
+LL C H + E+AE V + ++P++ G+YVL+SNIY+A RW D A LR M G
Sbjct: 479 SLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENG 538
Query: 571 LKKTPACSWI 580
+ K SWI
Sbjct: 539 ITKICGRSWI 548
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 176/356 (49%), Gaps = 26/356 (7%)
Query: 192 VFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKL-KPDSFTLSSILPIFAEHV 250
VF+ +P+ WN +I G + +F E + ++ M L +PD +T ++ + + +
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 251 DVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIA 310
V G +HG +R GFD DV +G+S +D Y KC + + + F +P R+A+SW +++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 311 GCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDD 370
V++G+ ++ F M + + S+++++ L K+L FD+
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLG----SWNALVDGLVKSGDLVNAKKL--------FDE 232
Query: 371 ----NKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLF 426
+ +S++D YAK G++ AR +F++ D+ AW+A+I+G A +G +A +F
Sbjct: 233 MPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVF 292
Query: 427 EKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYA--AVADLL 484
+M V+P + +++ACS G + K + + + R+ HY A+ D+
Sbjct: 293 SEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQ--RMNKFSSHYVVPALIDMN 350
Query: 485 GRAGRLEEAYDFISNMGIQPTGSVWSTL----LAACRAHKSVELAEKVVDKILLVD 536
+ G ++ A M + S S + + C +++ L EK+VD+ ++ D
Sbjct: 351 AKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGC-GSEAIRLFEKMVDEGIVPD 405
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 139/449 (30%), Positives = 239/449 (53%), Gaps = 26/449 (5%)
Query: 144 FDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVS 203
++L N++M+MY + LG F D VF M RDVVS
Sbjct: 167 YNLVVWNSVMDMY---RRLGVF---------------------DYALSVFLTMEDRDVVS 202
Query: 204 WNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAI 263
WN +I + +G ALD M + +++PD +T+S ++ I ++ ++ KG + I
Sbjct: 203 WNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCI 262
Query: 264 RHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIG 323
+ GF + + + IDM++KCNR++ S++ F L D++ NS+I + + +
Sbjct: 263 KMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALR 322
Query: 324 FFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYA 383
F + V+P + +FSSV+ + + L+ G +H +I+LGFD + +A+SL++MY
Sbjct: 323 LFILAMTQSVRPDKFTFSSVLSS-MNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYF 381
Query: 384 KCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKML-EDGVRPCYVAFM 442
K G++ +A +F K + +D++ W +IMG A + A++++++F ++L ++P V M
Sbjct: 382 KTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLM 441
Query: 443 AVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGI 502
+L AC +AG V+EG + F+SMEK + PG EHYA + +LL R G + EA D +
Sbjct: 442 GILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPF 501
Query: 503 QPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKL 562
+P+ +W +L A LAE V +L +P++ Y+++ IY RW+++ KL
Sbjct: 502 EPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKL 561
Query: 563 RIHMRSKGLKKTPACSWIEIGNKVHTFLA 591
R M LK S I I + V +F A
Sbjct: 562 RYAMNEHKLKSAQGSSKISIESSVFSFEA 590
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 171/361 (47%), Gaps = 20/361 (5%)
Query: 109 PTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGFGSA 168
P+ +F L+ S G Y N + +Y K G +A
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKS---GSVINA 58
Query: 169 NKVFDENPQRG--------KGC--KCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFR 218
++FD+ P + KG +++ +FD MP RDVVSWNT+I+G G
Sbjct: 59 LQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHE 118
Query: 219 EALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVK-GMEIHGYAIRHGFDG-DVFIGSS 276
+ + +M +++P FT S I A V V+ G +IHG AI G ++ + +S
Sbjct: 119 YGIRVFFDMQRWEIRPTEFTFS----ILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNS 174
Query: 277 LIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPM 336
++DMY + +++L F + RD +SWN +I C +G + + F M + +++P
Sbjct: 175 VMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPD 234
Query: 337 QVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFD 396
+ + S V+ C+ L L+ GKQ I++GF N + + +DM++KC + + +F
Sbjct: 235 EYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFR 294
Query: 397 KIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDE 456
++E D V ++I + H DA+ LF + VRP F +VL++ +A ++D
Sbjct: 295 ELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSM-NAVMLDH 353
Query: 457 G 457
G
Sbjct: 354 G 354
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 71/150 (47%), Gaps = 5/150 (3%)
Query: 335 PMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYI 394
P + FS ++ + L K +H ++ GF + + + +Y K G++ A +
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 395 FDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLV 454
FD I ++ + W + G +G+ +A+ LF++M E V V++ +++ G
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDV----VSWNTMISGLVSCGFH 117
Query: 455 DEGWKYFNSMEKDFRIAPGLEHYAAVADLL 484
+ G + F M++ + I P ++ +A L+
Sbjct: 118 EYGIRVFFDMQR-WEIRPTEFTFSILASLV 146
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 229/443 (51%), Gaps = 15/443 (3%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M L + P H S++ A + + D + ++ +MY K
Sbjct: 254 MLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDR 313
Query: 162 LGGFGSANKVFDENPQR----------GKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGN 211
L SA +VFD+ + G R++FDLMP R++VSWN ++ G
Sbjct: 314 LE---SARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGY 370
Query: 212 AQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDV 271
+ EALD + M + D+ TL IL + + DV G + HG+ RHG+D +V
Sbjct: 371 VHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNV 430
Query: 272 FIGSSLIDMYAKCNRVEHSLRAFYLLP-YRDAISWNSIIAGCVQNGKFDQGIGFFRQMLK 330
+ ++L+DMY KC ++ + F + RD +SWN+++ G + G+ +Q + FF M +
Sbjct: 431 IVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM-Q 489
Query: 331 AKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKM 390
+ KP + + ++++ CA++ ALNLGK +HG +IR G+ + I ++VDMY+KC
Sbjct: 490 VEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDY 549
Query: 391 ARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSH 450
A +F + TRD++ W +II GC +G + + LF + +GV+P +V F+ +L AC
Sbjct: 550 AIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIR 609
Query: 451 AGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWS 510
G V+ G++YF+SM + I+P +EHY + +L + G L + +F+ M P + +
Sbjct: 610 EGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLT 669
Query: 511 TLLAACRAHKSVELAEKVVDKIL 533
+ AC+ ++ +L +++
Sbjct: 670 RINDACQRYRWSKLGAWAAKRLM 692
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 156/286 (54%), Gaps = 5/286 (1%)
Query: 182 CKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
C C +D R++F+ MP RD SWN VI AQNG+ E M R M D ++ + +
Sbjct: 109 CGC-VDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAG 167
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
+L +D+ ++H +++G+ G+V + +S++D+Y KC + + R F +
Sbjct: 168 VLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPS 227
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
+SWN I+ ++ G D+ + F +ML+ V+P+ + SSV+ AC+ AL +GK +H
Sbjct: 228 DVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHA 287
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALD 421
++L + +++S+ DMY KC ++ AR +FD+ ++D+ +WT+ + G AM G +
Sbjct: 288 IAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTRE 347
Query: 422 AVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKD 467
A LF+ M E + V++ A+L HA DE + M ++
Sbjct: 348 ARELFDLMPERNI----VSWNAMLGGYVHAHEWDEALDFLTLMRQE 389
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 150/318 (47%), Gaps = 5/318 (1%)
Query: 252 VVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAG 311
VV+ ++ + + +F+ + I+ Y KC V+ + F +P RD SWN++I
Sbjct: 77 VVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITA 136
Query: 312 CVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDN 371
C QNG D+ FR+M + V+ + SF+ V+ +C + L L +QLH +++ G+ N
Sbjct: 137 CAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGN 196
Query: 372 KFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLE 431
+ +S+VD+Y KC + AR +FD+I V+W I+ G +AV +F KMLE
Sbjct: 197 VDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLE 256
Query: 432 DGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLE 491
VRP +V+ ACS + ++ G K +++ + +V D+ + RLE
Sbjct: 257 LNVRPLNHTVSSVMLACSRSLALEVG-KVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLE 315
Query: 492 EAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYS 551
A + S W++ ++ A ++ D L+ N+ ++ M Y
Sbjct: 316 SARRVFDQTRSKDLKS-WTSAMSGYAMSGLTREARELFD---LMPERNIVSWNAMLGGYV 371
Query: 552 AAKRWKDAAKLRIHMRSK 569
A W +A MR +
Sbjct: 372 HAHEWDEALDFLTLMRQE 389
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 140/446 (31%), Positives = 244/446 (54%), Gaps = 34/446 (7%)
Query: 144 FDLYT--ANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDV 201
++ YT +NA M MY ++ FG+A+KVF+ + +D+
Sbjct: 319 YEKYTLVSNATMTMYSSFED---FGAAHKVFES---------------------LEEKDL 354
Query: 202 VSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGY 261
V+WNT+I+ Q + + A+ + + M +KPD FT S+L + +DV++ +
Sbjct: 355 VTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLD-LDVLE--MVQAC 411
Query: 262 AIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQG 321
I+ G + I ++LI Y+K ++E + F ++ ISWN+II+G NG +G
Sbjct: 412 IIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEG 471
Query: 322 IGFFRQMLKAKVK--PMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLV 379
+ F +L+++V+ P + S+++ C ++L LG Q H ++R G I ++L+
Sbjct: 472 LERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALI 531
Query: 380 DMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDG-VRPCY 438
+MY++CG I+ + +F+++ +D+V+W ++I + HG +AV+ ++ M ++G V P
Sbjct: 532 NMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDA 591
Query: 439 VAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDF-- 496
F AVL+ACSHAGLV+EG + FNSM + + ++H++ + DLLGRAG L+EA
Sbjct: 592 ATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVK 651
Query: 497 ISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRW 556
IS I VW L +AC AH ++L + V ++ + ++ YV +SNIY+ A W
Sbjct: 652 ISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMW 711
Query: 557 KDAAKLRIHMRSKGLKKTPACSWIEI 582
K+A + R + G K CSW+ +
Sbjct: 712 KEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 160/316 (50%), Gaps = 29/316 (9%)
Query: 147 YTANALMNMYCKVQNLGGFGSANKVFDE--NPQRGKGCKC--------EIDSVRKVFDLM 196
+ +N L+++Y + LG S K FDE P +I+ +VFD M
Sbjct: 93 HVSNTLLSLY---ERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKM 149
Query: 197 PARDVVS-WNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKG 255
P RD V+ WN +I G ++G ++++ REM ++ D F ++IL + ++ + G
Sbjct: 150 PERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSM-CDYGSLDFG 208
Query: 256 MEIHGYAIRHGFDGDVFIGSS----LIDMYAKCNRVEHSLRAFYL--LPYRDAISWNSII 309
++H I+ GF FI SS LI MY C V + F + RD +++N +I
Sbjct: 209 KQVHSLVIKAGF----FIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVI 264
Query: 310 AGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFD 369
G + K D+ + FR+ML+A ++P ++F SV+ +C + +G Q+HG I+ G++
Sbjct: 265 DG-LAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSC---SCAAMGHQVHGLAIKTGYE 320
Query: 370 DNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM 429
++++ + MY+ + A +F+ +E +D+V W +I A+S++++M
Sbjct: 321 KYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRM 380
Query: 430 LEDGVRPCYVAFMAVL 445
GV+P F ++L
Sbjct: 381 HIIGVKPDEFTFGSLL 396
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 156/324 (48%), Gaps = 36/324 (11%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M +G+ P F SLL S LD D+ M C ++
Sbjct: 380 MHIIGVKPDEFTFGSLLATS--------------------LDLDVLE----MVQACIIK- 414
Query: 162 LGGFGSANKVFDENPQRGKGCK-CEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREA 220
FG ++K+ N K +I+ +F+ ++++SWN +I+G NG E
Sbjct: 415 ---FGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEG 471
Query: 221 LDMVREMGDDKLK--PDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLI 278
L+ + + +++ PD++TLS++L I ++ G + H Y +RHG + IG++LI
Sbjct: 472 LERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALI 531
Query: 279 DMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQML-KAKVKPMQ 337
+MY++C +++SL F + +D +SWNS+I+ ++G+ + + ++ M + KV P
Sbjct: 532 NMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDA 591
Query: 338 VSFSSVIPACAHLTALNLGKQLHGCIIRL-GFDDNKFIASSLVDMYAKCGNIKMARY--- 393
+FS+V+ AC+H + G ++ ++ G N S LVD+ + G++ A
Sbjct: 592 ATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVK 651
Query: 394 IFDKIETRDMVAWTAIIMGCAMHG 417
I +K + W A+ CA HG
Sbjct: 652 ISEKTIGSRVDVWWALFSACAAHG 675
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 145/293 (49%), Gaps = 47/293 (16%)
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGD-DKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
+++ N + G ++G R AL + ++ L+PD +++S + D + G ++H
Sbjct: 21 LLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVH 80
Query: 260 GYAIRHGF-------------------------------DGDVFIGSSLIDMYAKCNRVE 288
YAIR G + DV+ ++L+ K +E
Sbjct: 81 CYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIE 140
Query: 289 HSLRAFYLLPYRDAIS-WNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPAC 347
++ F +P RD ++ WN++I GC ++G + + FR+M K V+ + F++++ C
Sbjct: 141 YAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC 200
Query: 348 AHLTALNLGKQLHGCIIRLGFDDNKFIASSLVD----MYAKCGNIKMARYIFDK--IETR 401
+ +L+ GKQ+H +I+ GF FIASS+V+ MY C + A +F++ + R
Sbjct: 201 DY-GSLDFGKQVHSLVIKAGF----FIASSVVNALITMYFNCQVVVDACLVFEETDVAVR 255
Query: 402 DMVAWTAIIMGCAMHGHALD-AVSLFEKMLEDGVRPCYVAFMAVLTACSHAGL 453
D V + +I G A G D ++ +F KMLE +RP + F++V+ +CS A +
Sbjct: 256 DQVTFNVVIDGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM 306
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 188/313 (60%), Gaps = 1/313 (0%)
Query: 182 CKC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLS 240
CKC ++ S R+VF R+ +SW +++G A NG F +AL + M + +PD T++
Sbjct: 363 CKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIA 422
Query: 241 SILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR 300
++LP+ AE + +G EIH YA+++ F +V + +SL+ MY+KC E+ +R F L R
Sbjct: 423 TVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQR 482
Query: 301 DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLH 360
+ +W ++I V+N GI FR ML +K +P V+ V+ C+ L AL LGK+LH
Sbjct: 483 NVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELH 542
Query: 361 GCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHAL 420
G I++ F+ F+++ ++ MY KCG+++ A + FD + + + WTAII +
Sbjct: 543 GHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFR 602
Query: 421 DAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAV 480
DA++ FE+M+ G P F AVL+ CS AG VDE +++FN M + + + P EHY+ V
Sbjct: 603 DAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLV 662
Query: 481 ADLLGRAGRLEEA 493
+LL R GR+EEA
Sbjct: 663 IELLNRCGRVEEA 675
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 187/358 (52%), Gaps = 15/358 (4%)
Query: 166 GSANKVFDENPQRGKGCKC-EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMV 224
G N VF + KC ++ R+VFD + RD+V W +IAG A N EAL +
Sbjct: 244 GLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLF 303
Query: 225 REM-GDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIR-HGFDGDVFIGSSLIDMYA 282
R M ++K+ P+S L++ILP+ + + G E+H + ++ + F+ S LID+Y
Sbjct: 304 RTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYC 363
Query: 283 KCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSS 342
KC + R FY R+AISW ++++G NG+FDQ + M + +P V+ ++
Sbjct: 364 KCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIAT 423
Query: 343 VIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRD 402
V+P CA L A+ GK++H ++ F N + +SL+ MY+KCG + +FD++E R+
Sbjct: 424 VLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRN 483
Query: 403 MVAWTAIIMGCAMHGHALDA-VSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWK-Y 460
+ AWTA+I C + L A + +F ML RP V VLT CS + G + +
Sbjct: 484 VKAWTAMI-DCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELH 542
Query: 461 FNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEA---YDFISNMGIQPTGSVWSTLLAA 515
+ ++K+F P + A + + G+ G L A +D ++ G W+ ++ A
Sbjct: 543 GHILKKEFESIPFVS--ARIIKMYGKCGDLRSANFSFDAVAVKG----SLTWTAIIEA 594
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 151/276 (54%), Gaps = 4/276 (1%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNG--MFREALDMVREMGDDKLKPDSFTLSSIL 243
+ +KVFD + +V SWN ++ G +G +++ L EM + + + ++LS++
Sbjct: 162 VKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVF 221
Query: 244 PIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAI 303
FA + +G++ H AI++G VF+ +SL+DMY KC +V + R F + RD +
Sbjct: 222 KSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIV 281
Query: 304 SWNSIIAGCVQNGKFDQGIGFFRQML-KAKVKPMQVSFSSVIPACAHLTALNLGKQLHGC 362
W ++IAG N + + +G FR M+ + K+ P V ++++P + AL LGK++H
Sbjct: 282 VWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAH 341
Query: 363 IIR-LGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALD 421
+++ + + F+ S L+D+Y KCG++ R +F + R+ ++WTA++ G A +G
Sbjct: 342 VLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQ 401
Query: 422 AVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG 457
A+ M ++G RP V VL C+ + +G
Sbjct: 402 ALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQG 437
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 121/237 (51%), Gaps = 3/237 (1%)
Query: 212 AQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDV 271
A+ AL ++ + + ++ T S++L ++ G ++H + +G + +
Sbjct: 87 ARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNE 146
Query: 272 FIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGK--FDQGIGFFRQML 329
F+ + L+ MY C V+ + + F + SWN+++ G V +GK + + F +M
Sbjct: 147 FLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMR 206
Query: 330 KAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIK 389
+ V S S+V + A +AL G + H I+ G ++ F+ +SLVDMY KCG +
Sbjct: 207 ELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVG 266
Query: 390 MARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKML-EDGVRPCYVAFMAVL 445
+AR +FD+I RD+V W A+I G A + +A+ LF M+ E+ + P V +L
Sbjct: 267 LARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTIL 323
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 236 bits (602), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 131/397 (32%), Positives = 226/397 (56%), Gaps = 15/397 (3%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
+DSVR VF+ + +D+VSWN +++G +NG +EAL + M ++++ FTLSS++
Sbjct: 136 VDSVR-VFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKT 194
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLP-YRDAIS 304
A + +G ++H + G D V +G+++I Y+ + +++ + L + D +
Sbjct: 195 CASLKILQQGKQVHAMVVVTGRD-LVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVM 253
Query: 305 WNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCII 364
NS+I+GC++N + + +L ++ +P SS + C+ + L +GKQ+H +
Sbjct: 254 LNSLISGCIRNRNYKEAF-----LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVAL 308
Query: 365 RLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVS 424
R GF + + + L+DMY KCG I AR IF I ++ +V+WT++I A++G + A+
Sbjct: 309 RNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALE 368
Query: 425 LFEKMLEDG--VRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVAD 482
+F +M E+G V P V F+ V++AC+HAGLV EG + F M++ +R+ PG EHY D
Sbjct: 369 IFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFID 428
Query: 483 LLGRAGRLEEAYDFISNMGIQPTGS----VWSTLLAACRAHKSVELAEKVVDKIL-LVDP 537
+L +AG EE + + M S +W +L+AC + + E V +++ P
Sbjct: 429 ILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGP 488
Query: 538 ENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKT 574
EN YVL+SN Y+A +W +LR +++KGL KT
Sbjct: 489 ENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKT 525
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 175/368 (47%), Gaps = 27/368 (7%)
Query: 192 VFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVD 251
+FD +P RD+ S N+ ++ + ++G + L + ++ S T + +L +
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSY 99
Query: 252 VVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAG 311
G ++H I+ G + ++LIDMY+K + S+R F + +D +SWN++++G
Sbjct: 100 PETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSG 159
Query: 312 CVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDN 371
++NGK + +G F M + +V+ + + SSV+ CA L L GKQ+H ++ G D
Sbjct: 160 FLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG-RDL 218
Query: 372 KFIASSLVDMYAKCGNIKMARYIFDKIETR-DMVAWTAIIMGCAMHGHALDAVSLFEKML 430
+ ++++ Y+ G I A +++ + D V ++I GC + + +A L +
Sbjct: 219 VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ- 277
Query: 431 EDGVRPCYVAFMAVLTACSHAGLVDEGWKYF-----NSMEKDFRIAPGLEHYAAVADLLG 485
RP + L CS + G + N D ++ GL D+ G
Sbjct: 278 ----RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGL------MDMYG 327
Query: 486 RAGRLEEAYDFISNMGIQPTGSV--WSTLLAACRAH----KSVELAEKVVDKILLVDPEN 539
+ G++ +A + P+ SV W++++ A + K++E+ ++ ++ V P +
Sbjct: 328 KCGQIVQARTIFRAI---PSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNS 384
Query: 540 MGAYVLMS 547
+ V++S
Sbjct: 385 VTFLVVIS 392
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 101/193 (52%), Gaps = 6/193 (3%)
Query: 269 GDVFIGSSLIDMYAKC----NRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGF 324
G+V + S+ ++ +C N H+ F LP RD S NS ++ +++G + +
Sbjct: 14 GNVTVKST--NLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLAL 71
Query: 325 FRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAK 384
F Q+ +A +F+ V+ AC+ L+ G+Q+H +I+ G + ++L+DMY+K
Sbjct: 72 FLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSK 131
Query: 385 CGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAV 444
G++ + +F+ +E +D+V+W A++ G +G +A+ +F M + V +V
Sbjct: 132 YGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSV 191
Query: 445 LTACSHAGLVDEG 457
+ C+ ++ +G
Sbjct: 192 VKTCASLKILQQG 204
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 234 bits (597), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 211/394 (53%), Gaps = 13/394 (3%)
Query: 196 MPARDVVSWNTVIAG------NAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEH 249
+P V +NT+I+ + Q + D + + ++P+ FT S+ A
Sbjct: 66 IPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFK--ASG 123
Query: 250 VDVV---KGMEIHGYAIR--HGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS 304
D G +H + ++ + D F+ ++L+ YA C ++ + F + D +
Sbjct: 124 FDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLAT 183
Query: 305 WNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCII 364
WN+++A + + D ++ +V+P ++S ++I +CA+L G H ++
Sbjct: 184 WNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVL 243
Query: 365 RLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVS 424
+ N+F+ +SL+D+Y+KCG + AR +FD++ RD+ + A+I G A+HG + +
Sbjct: 244 KNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIE 303
Query: 425 LFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLL 484
L++ ++ G+ P F+ ++ACSH+GLVDEG + FNSM+ + I P +EHY + DLL
Sbjct: 304 LYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLL 363
Query: 485 GRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYV 544
GR+GRLEEA + I M ++P ++W + L + + H E E + +L ++ EN G YV
Sbjct: 364 GRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYV 423
Query: 545 LMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACS 578
L+SNIY+ RW D K R M+ + K+P S
Sbjct: 424 LLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 114/235 (48%), Gaps = 2/235 (0%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP 244
++ R +F+ + D+ +WNT++A A + +++ +++P+ +L +++
Sbjct: 165 KLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIK 224
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS 304
A + V+G+ H Y +++ + F+G+SLID+Y+KC + + + F + RD
Sbjct: 225 SCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSC 284
Query: 305 WNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCII 364
+N++I G +G +GI ++ ++ + P +F I AC+H ++ G Q+ +
Sbjct: 285 YNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMK 344
Query: 365 RL-GFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR-DMVAWTAIIMGCAMHG 417
+ G + LVD+ + G ++ A K+ + + W + + HG
Sbjct: 345 AVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHG 399
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
Query: 182 CKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
C C + RKVFD M RDV +N +I G A +G +E +++ + + L PDS T
Sbjct: 264 CGC-LSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVV 322
Query: 242 ILPIFAEHVDVVKGMEI-HGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR 300
+ + V +G++I + +G + V L+D+ + R+E + +P +
Sbjct: 323 TISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVK 382
Query: 301 -DAISWNSIIAGCVQNGKFDQG 321
+A W S + +G F++G
Sbjct: 383 PNATLWRSFLGSSQTHGDFERG 404
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 232 bits (592), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 138/428 (32%), Positives = 228/428 (53%), Gaps = 34/428 (7%)
Query: 182 CKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNG-------MFREA---------LDMVR 225
C C + S RKVFD MP R+V +WN +I G NG +F E ++M++
Sbjct: 94 CGCVV-SARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIK 152
Query: 226 EMGDDKLKPDSFTLSSILPIFAEHV---DVVKGMEIHGYAI---RHGFDG----DVFIGS 275
G + L +P ++V V+ G+ ++ + R F+ + F+ S
Sbjct: 153 GYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWS 212
Query: 276 SLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKP 335
++ Y + V + FY + RD + WN++IAG QNG D I F M +P
Sbjct: 213 LMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEP 272
Query: 336 MQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIF 395
V+ SS++ ACA L++G+++H I G + N+F++++L+DMYAKCG+++ A +F
Sbjct: 273 DAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVF 332
Query: 396 DKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVD 455
+ I R + ++I A+HG +A+ +F M ++P + F+AVLTAC H G +
Sbjct: 333 ESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLM 392
Query: 456 EGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAA 515
EG K F+ M K + P ++H+ + LLGR+G+L+EAY + M ++P +V LL A
Sbjct: 393 EGLKIFSEM-KTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGA 451
Query: 516 CRAHKSVELAEKVVDKILLVDPENMGAY-----VLMSNIYSAAKRWKDAAKLRIHMRSKG 570
C+ H E+AE+V+ KI+ +Y +SN+Y+ +RW+ A LR+ M +G
Sbjct: 452 CKVHMDTEMAEQVM-KIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRG 510
Query: 571 LKKTPACS 578
L+K+P S
Sbjct: 511 LEKSPGLS 518
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 144/302 (47%), Gaps = 30/302 (9%)
Query: 252 VVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAG 311
VV G +H +I+ G DV +GSSLI MY KC V + + F +P R+ +WN++I G
Sbjct: 62 VVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGG 121
Query: 312 CVQNGKFDQGIGFFR------------QMLKAKVKPMQVS-----FSSVIPACAHLTALN 354
+ NG G F +M+K K +++ F + ++ A +
Sbjct: 122 YMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWS 181
Query: 355 --LGKQLHGCII---RLGFDD----NKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVA 405
LG ++ + R F+D N F+ S ++ Y + G++ AR IF ++ RD+V
Sbjct: 182 VMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVI 241
Query: 406 WTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSME 465
W +I G A +G++ DA+ F M +G P V ++L+AC+ +G +D G + +S+
Sbjct: 242 WNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVG-REVHSLI 300
Query: 466 KDFRIAPGLEHYAAVADLLGRAGRLEEA---YDFISNMGIQPTGSVWSTLLAACRAHKSV 522
I A+ D+ + G LE A ++ IS + S+ S L + +++
Sbjct: 301 NHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEAL 360
Query: 523 EL 524
E+
Sbjct: 361 EM 362
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 328 MLKAKVKPMQVSFSSVIP----ACAHLTA-LNLGKQLHGCIIRLGFDDNKFIASSLVDMY 382
+L ++ V F +P ACA + + LGK LH I+ G + + SSL+ MY
Sbjct: 32 VLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMY 91
Query: 383 AKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM 429
KCG + AR +FD++ R++ W A+I G +G A+ A LFE++
Sbjct: 92 GKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEI 138
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 133/429 (31%), Positives = 223/429 (51%), Gaps = 44/429 (10%)
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFR---EALDMVREMGDDKLKPDSFTLSSILPIFA 247
++F+ +P + VV++N I+G +NG+ +++R+ ++ P+ T + + A
Sbjct: 185 RMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEE--PNDVTFVNAITACA 242
Query: 248 EHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLP-YRDAISWN 306
+++ G ++HG ++ F + +G++LIDMY+KC + + F L R+ ISWN
Sbjct: 243 SLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWN 302
Query: 307 SIIAGCVQNGKFDQGI-----------------------------------GFFRQMLKA 331
S+I+G + NG+ + + FF +ML
Sbjct: 303 SVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSV 362
Query: 332 KVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMA 391
+ P +S++ AC+ + L GK++HG +I+ + + F+ +SL+DMY KCG A
Sbjct: 363 VMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWA 422
Query: 392 RYIFDKIETR--DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACS 449
R IFD+ E + D V W +I G HG A+ +FE + E+ V P F AVL+ACS
Sbjct: 423 RRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACS 482
Query: 450 HAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVW 509
H G V++G + F M++++ P EH + DLLGR+GRL EA + I M +
Sbjct: 483 HCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY- 541
Query: 510 STLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSK 569
S+LL +CR H L E+ K+ ++PEN +V++S+IY+A +RW+D +R + K
Sbjct: 542 SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQK 601
Query: 570 GLKKTPACS 578
L K P S
Sbjct: 602 QLVKLPGLS 610
Score = 185 bits (470), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 183/359 (50%), Gaps = 29/359 (8%)
Query: 108 SPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGFGS 167
SP + FP LLK+ G D++TA AL++MY KV+
Sbjct: 28 SPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVK------- 80
Query: 168 ANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREM 227
++ KV D MP R + S N ++G +NG R+A M
Sbjct: 81 -----------------QVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRM---F 120
Query: 228 GDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRV 287
GD ++ ++ + D+ GM++H A++ GF+ +V++G+SL+ MY++C
Sbjct: 121 GDARVSGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEW 180
Query: 288 EHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLK-AKVKPMQVSFSSVIPA 346
+ R F +P++ +++N+ I+G ++NG + F M K + +P V+F + I A
Sbjct: 181 VLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITA 240
Query: 347 CAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKI-ETRDMVA 405
CA L L G+QLHG +++ F + ++L+DMY+KC K A +F ++ +TR++++
Sbjct: 241 CASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLIS 300
Query: 406 WTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSM 464
W ++I G ++G AV LFEK+ +G++P + ++++ S G V E +K+F M
Sbjct: 301 WNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM 359
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 142/456 (31%), Positives = 228/456 (50%), Gaps = 25/456 (5%)
Query: 100 NAMRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKV 159
N +RA G++ R F + LK+ + G NAL++ YC
Sbjct: 114 NQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVC 173
Query: 160 QNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFRE 219
G A KVFDE PQ + D V+++T++ G Q
Sbjct: 174 ---GKISDARKVFDEMPQ--------------------SVDAVTFSTLMNGYLQVSKKAL 210
Query: 220 ALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLID 279
ALD+ R M ++ + TL S L ++ D+ H I+ G D D+ + ++LI
Sbjct: 211 ALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIG 270
Query: 280 MYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVS 339
MY K + + R F +D ++WN +I + G ++ + RQM K+KP +
Sbjct: 271 MYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSST 330
Query: 340 FSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIE 399
F ++ +CA+ A +G+ + + + + ++LVDMYAK G ++ A IF++++
Sbjct: 331 FVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMK 390
Query: 400 TRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDG--VRPCYVAFMAVLTACSHAGLVDEG 457
+D+ +WTA+I G HG A +AV+LF KM E+ VRP + F+ VL ACSH GLV EG
Sbjct: 391 DKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEG 450
Query: 458 WKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACR 517
+ F M + + P +EHY V DLLGRAG+LEEAY+ I N+ I + W LLAACR
Sbjct: 451 IRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACR 510
Query: 518 AHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAA 553
+ + +L E V+ ++ + + +L++ ++ A
Sbjct: 511 VYGNADLGESVMMRLAEMGETHPADAILLAGTHAVA 546
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 178/368 (48%), Gaps = 7/368 (1%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP 244
+I +F+ + ++ +NT+I G + + A + ++ L D F+ + L
Sbjct: 74 DIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLK 133
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR-DAI 303
+ + V G +HG A+R GF + ++LI Y C ++ + + F +P DA+
Sbjct: 134 SCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAV 193
Query: 304 SWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCI 363
++++++ G +Q K + FR M K++V + S + A + L L+ + H
Sbjct: 194 TFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLC 253
Query: 364 IRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAV 423
I++G D + + ++L+ MY K G I AR IFD +D+V W +I A G + V
Sbjct: 254 IKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECV 313
Query: 424 SLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADL 483
L +M + ++P F+ +L++C+++ G + +E++ RIA A+ D+
Sbjct: 314 WLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEE-RIALDAILGTALVDM 372
Query: 484 LGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAH----KSVELAEKVVDKILLVDPEN 539
+ G LE+A + + M + S W+ +++ AH ++V L K+ ++ V P
Sbjct: 373 YAKVGLLEKAVEIFNRMKDKDVKS-WTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNE 431
Query: 540 MGAYVLMS 547
+ V+++
Sbjct: 432 ITFLVVLN 439
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 97/203 (47%), Gaps = 2/203 (0%)
Query: 251 DVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIA 310
D V+ IHGY ++ G D D F S L+ ++ + ++ F + + +N++I
Sbjct: 40 DTVEVSRIHGYMVKTGLDKDDFAVSKLL-AFSSVLDIRYASSIFEHVSNTNLFMFNTMIR 98
Query: 311 GCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDD 370
G + + ++ F Q+ + + SF + + +C+ +++G+ LHG +R GF
Sbjct: 99 GYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMV 158
Query: 371 NKFIASSLVDMYAKCGNIKMARYIFDKI-ETRDMVAWTAIIMGCAMHGHALDAVSLFEKM 429
+ ++L+ Y CG I AR +FD++ ++ D V ++ ++ G A+ LF M
Sbjct: 159 FTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIM 218
Query: 430 LEDGVRPCYVAFMAVLTACSHAG 452
+ V ++ L+A S G
Sbjct: 219 RKSEVVVNVSTLLSFLSAISDLG 241
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 127/398 (31%), Positives = 211/398 (53%), Gaps = 41/398 (10%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP 244
++ S R +FD M RD +SWNT+I G V M D+F L S +P
Sbjct: 296 DVVSARLLFDQMKDRDTISWNTMIDGYVH----------VSRM------EDAFALFSEMP 339
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS 304
+ D + ++ YA VE + F P + +S
Sbjct: 340 -----------------------NRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVS 376
Query: 305 WNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCII 364
WNSIIA +N + + + F +M KP + +S++ A L L LG Q+H ++
Sbjct: 377 WNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVV 436
Query: 365 RLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIE-TRDMVAWTAIIMGCAMHGHALDAV 423
+ D + ++L+ MY++CG I +R IFD+++ R+++ W A+I G A HG+A +A+
Sbjct: 437 KTVIPDVP-VHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEAL 495
Query: 424 SLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADL 483
+LF M +G+ P ++ F++VL AC+HAGLVDE F SM ++I P +EHY+++ ++
Sbjct: 496 NLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNV 555
Query: 484 LGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAY 543
G+ EEA I++M +P +VW LL ACR + +V LA + + ++PE+ Y
Sbjct: 556 TSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPY 615
Query: 544 VLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIE 581
VL+ N+Y+ W +A+++R++M SK +KK SW++
Sbjct: 616 VLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 119/289 (41%), Gaps = 80/289 (27%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP 244
E++ RK+FD+MP RDVV+WNT+I+G G R L+ R++ D+ DSF+ ++
Sbjct: 86 EMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIR-FLEEARKLFDEMPSRDSFSWNT--- 141
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS 304
+I YAK R+ +L F +P R+A+S
Sbjct: 142 --------------------------------MISGYAKNRRIGEALLLFEKMPERNAVS 169
Query: 305 WNSIIAGCVQNGKFDQGIGFFRQMLKAKVKP----------------------------- 335
W+++I G QNG+ D + FR+M P
Sbjct: 170 WSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVS 229
Query: 336 ----MQVSFSSVIPACAHLTALNLGKQL-----------HGCIIRLGFDDNKFIASSLVD 380
+ +++++I + + L HG R F N +S++
Sbjct: 230 GREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIK 289
Query: 381 MYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM 429
Y K G++ AR +FD+++ RD ++W +I G DA +LF +M
Sbjct: 290 AYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM 338
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 226/469 (48%), Gaps = 64/469 (13%)
Query: 107 ISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGFG 166
+ P ++ F +LKA GL D++ N L+N+Y
Sbjct: 136 VFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVY---------- 185
Query: 167 SANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVRE 226
G+ EI RKV D MP RD VSWN++++ + G+ EA + E
Sbjct: 186 ------------GRSGYFEI--ARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDE 231
Query: 227 MGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNR 286
M + ++ +F +S YA
Sbjct: 232 MEERNVESWNFMISG---------------------------------------YAAAGL 252
Query: 287 VEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLK-AKVKPMQVSFSSVIP 345
V+ + F +P RD +SWN+++ G +++ + F +ML + KP + SV+
Sbjct: 253 VKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLS 312
Query: 346 ACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVA 405
ACA L +L+ G+ +H I + G + F+A++LVDMY+KCG I A +F RD+
Sbjct: 313 ACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVST 372
Query: 406 WTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSME 465
W +II ++HG DA+ +F +M+ +G +P + F+ VL+AC+H G++D+ K F M
Sbjct: 373 WNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMS 432
Query: 466 KDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELA 525
+R+ P +EHY + DLLGR G++EEA + ++ + + +LL AC+ +E A
Sbjct: 433 SVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQA 492
Query: 526 EKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKT 574
E++ +++L ++ + Y MSN+Y++ RW+ R +MR++ + ++
Sbjct: 493 ERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNRS 541
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 145/315 (46%), Gaps = 19/315 (6%)
Query: 224 VREMGDDKLKPDSFTLSSILPI--FAEHV-DVVKGMEIHGYAIRHGFDGDVFIGSSLIDM 280
+R + + LK S S+ +PI F E + + + H + ++ G D F S L+
Sbjct: 21 LRLLQKENLKKMSVCSSTPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAF 80
Query: 281 YA---KCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQ 337
A + V ++ + + + NS+I + + + FR+ML V P +
Sbjct: 81 AATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDK 140
Query: 338 VSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDK 397
SF+ V+ ACA G+Q+HG I+ G + F+ ++LV++Y + G ++AR + D+
Sbjct: 141 YSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDR 200
Query: 398 IETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG 457
+ RD V+W +++ G +A +LF++M E V ++ +++ + AGLV E
Sbjct: 201 MPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVE----SWNFMISGYAAAGLVKEA 256
Query: 458 WKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM----GIQPTGSVWSTLL 513
+ F+SM + + A+ G E + + M +P G ++L
Sbjct: 257 KEVFDSMP-----VRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVL 311
Query: 514 AACRAHKSVELAEKV 528
+AC + S+ E V
Sbjct: 312 SACASLGSLSQGEWV 326
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 122/395 (30%), Positives = 198/395 (50%), Gaps = 34/395 (8%)
Query: 234 PDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRA 293
PDS+T S++ + V G HG AI+HG D + + +SL+ MY C ++ + +
Sbjct: 116 PDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKL 175
Query: 294 FYLLPYRDAISWNSIIAGCVQNGK-------FDQ------------------------GI 322
F +P RD +SWNSIIAG V+NG FD+ I
Sbjct: 176 FVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSI 235
Query: 323 GFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMY 382
FR+M++A + + + ++ AC L G+ +H +IR + + I ++L+DMY
Sbjct: 236 SLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMY 295
Query: 383 AKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFM 442
KC + +AR IFD + R+ V W +I+ +HG + LFE M+ +RP V F+
Sbjct: 296 GKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFV 355
Query: 443 AVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM-- 500
VL C+ AGLV +G Y++ M +F+I P H +A+L AG EEA + + N+
Sbjct: 356 GVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPD 415
Query: 501 -GIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDA 559
+ P + W+ LL++ R + L E + ++ DP N Y L+ NIYS RW+D
Sbjct: 416 EDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDV 475
Query: 560 AKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDK 594
++R ++ + + + P C +++ VH G K
Sbjct: 476 NRVREMVKERKIGRIPGCGLVDLKEIVHGLRLGCK 510
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 133/306 (43%), Gaps = 18/306 (5%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQR----------GKGCKCEIDSVR 190
G D L N+LM+MY G A K+F E P+R G ++ +
Sbjct: 148 GCDQVLPVQNSLMHMY---TCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAH 204
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHV 250
K+FD MP ++++SWN +I+ ++ + REM + + TL +L
Sbjct: 205 KLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSA 264
Query: 251 DVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIA 310
+ +G +H IR + V I ++LIDMY KC V + R F L R+ ++WN +I
Sbjct: 265 RLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMIL 324
Query: 311 GCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCII-RLGFD 369
+G+ + G+ F M+ ++P +V+F V+ CA ++ G+ + ++
Sbjct: 325 AHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIK 384
Query: 370 DNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVA----WTAIIMGCAMHGHALDAVSL 425
N + ++Y+ G + A + D+ W ++ G+ S+
Sbjct: 385 PNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESI 444
Query: 426 FEKMLE 431
+ ++E
Sbjct: 445 AKSLIE 450
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 107/251 (42%), Gaps = 35/251 (13%)
Query: 320 QGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLV 379
Q +GF+ +L+ P +F S+I ++ GK HG I+ G D + +SL+
Sbjct: 101 QALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLM 160
Query: 380 DMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDA----------------- 422
MY CG + +A+ +F +I RD+V+W +II G +G L A
Sbjct: 161 HMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNI 220
Query: 423 --------------VSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDF 468
+SLF +M+ G + + +L AC + + EG S+ + F
Sbjct: 221 MISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTF 280
Query: 469 RIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAAC---RAHKSVELA 525
+ + A+ D+ G+ + A ++ I+ + +LA C R +EL
Sbjct: 281 -LNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELF 339
Query: 526 EKVVDKILLVD 536
E +++ +L D
Sbjct: 340 EAMINGMLRPD 350
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 222 bits (566), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 122/370 (32%), Positives = 214/370 (57%), Gaps = 17/370 (4%)
Query: 235 DSFT-LSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRA 293
DSF+ L +I A+ + G +IH + GF+ + I +SL+ Y+ V+++ +
Sbjct: 63 DSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQV 122
Query: 294 FYLLPYRDAIS-WNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTA 352
F P + I W ++I+ +N + I F++M K++ V + + ACA L A
Sbjct: 123 FDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGA 182
Query: 353 LNLGKQLHGCII----RLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTA 408
+ +G++++ I RL D + +SL++MY K G + AR +FD+ +D+ +T+
Sbjct: 183 VQMGEEIYSRSIKRKRRLAMDLT--LRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTS 240
Query: 409 IIMGCAMHGHALDAVSLFEKM------LEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFN 462
+I G A++G A +++ LF+KM + + P V F+ VL ACSH+GLV+EG ++F
Sbjct: 241 MIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFK 300
Query: 463 SMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSV 522
SM D+ + P H+ + DL R+G L++A++FI+ M I+P +W TLL AC H +V
Sbjct: 301 SMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNV 360
Query: 523 ELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEI 582
EL E+V +I +D +++G YV +SNIY++ W + +K+R +R ++ P SWIE+
Sbjct: 361 ELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRK---RRMPGKSWIEL 417
Query: 583 GNKVHTFLAG 592
G+ ++ F++G
Sbjct: 418 GSIINEFVSG 427
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 141/300 (47%), Gaps = 14/300 (4%)
Query: 185 EIDSVRKVFDLMPAR-DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSIL 243
++D R+VFD P + ++V W +I+ +N EA+++ + M +K++ D ++ L
Sbjct: 115 DVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVAL 174
Query: 244 PIFAEHVDVVKGMEIHGYAIRHG--FDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
A+ V G EI+ +I+ D+ + +SL++MY K E + + F +D
Sbjct: 175 SACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKD 234
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQM------LKAKVKPMQVSFSSVIPACAHLTALNL 355
++ S+I G NG+ + + F++M + P V+F V+ AC+H +
Sbjct: 235 VTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEE 294
Query: 356 GKQ-LHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR-DMVAWTAIIMGC 413
GK+ I+ + +VD++ + G++K A +++ + + V W ++ C
Sbjct: 295 GKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGAC 354
Query: 414 AMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPG 473
++HG+ + ++ E R ++A+ + G+ DE K + + K R PG
Sbjct: 355 SLHGNVELGEEVQRRIFELD-RDHVGDYVALSNIYASKGMWDEKSKMRDRVRK--RRMPG 411
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 221 bits (563), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 212/411 (51%), Gaps = 36/411 (8%)
Query: 204 WNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAI 263
+NT+I G ++ +L + M ++P++ T S++ V G+ +HG A+
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 264 RHGFDGDVFIGSSLIDMYAK---------------------CN----------RVEHSLR 292
+ GF D F+ +S + Y + CN ++++
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 293 AFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQML---KAKVKPMQVSFSSVIPACAH 349
F +P D +SW ++I G + G + + F +M+ +A + P + +F SV+ +CA+
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 350 LT--ALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWT 407
+ LGKQ+HG ++ + ++L+DMY K G+++MA IFD+I + + AW
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 408 AIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKD 467
AII A +G A+ +FE M V P + +A+LTAC+ + LVD G + F+S+ +
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSE 353
Query: 468 FRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEK 527
++I P EHY V DL+GRAG L +A +FI ++ +P SV LL AC+ H++ EL
Sbjct: 354 YKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNT 413
Query: 528 VVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACS 578
V +++ + P++ G YV +S + W +A K+R M G++K PA S
Sbjct: 414 VGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 167/386 (43%), Gaps = 33/386 (8%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M A + P FPSL+KA+ G +D + + + Y +V
Sbjct: 77 MLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEV-- 134
Query: 162 LGGFGSANKVFDE--NP--------QRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGN 211
G S+ K+FD+ NP G E+D + F MP DVVSW TVI G
Sbjct: 135 -GDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGF 193
Query: 212 AQNGMFREALDMVREMGDDK---LKPDSFTLSSILPIFA--EHVDVVKGMEIHGYAIRHG 266
++ G+ +AL + EM ++ + P+ T S+L A + + G +IHGY +
Sbjct: 194 SKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKE 253
Query: 267 FDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFR 326
+G++L+DMY K +E +L F + + +WN+II+ NG+ Q + F
Sbjct: 254 IILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFE 313
Query: 327 QMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASS-----LVDM 381
M + V P ++ +++ ACA ++LG QL I + K I +S +VD+
Sbjct: 314 MMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSIC----SEYKIIPTSEHYGCVVDL 369
Query: 382 YAKCG-NIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVA 440
+ G + A +I D A++ C +H + ++ ++++ G++P +
Sbjct: 370 IGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLI--GLQPQHCG 427
Query: 441 FMAVLTACSHAGLVDEGWKYFNSMEK 466
L S +D W M K
Sbjct: 428 QYVAL---STFNALDSNWSEAEKMRK 450
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 150/518 (28%), Positives = 253/518 (48%), Gaps = 27/518 (5%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M + GI +PS++KA +LY NAL++MY +
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMY---KR 231
Query: 162 LGGFGSANKVFDENPQRGK-------GCKCEIDSVRKVFDLMP-------ARDVVSWNTV 207
G A ++FD +R C + + + F L+ +V+WNT+
Sbjct: 232 FGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTI 291
Query: 208 IAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVK-GMEIHGYAIRH- 265
G + G + AL+ V M + ++ S + + L H+ +K G H IR
Sbjct: 292 AGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKA-CSHIGALKWGKVFHCLVIRSC 350
Query: 266 GFDGDV-FIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGF 324
F D+ + +SLI MY++C+ + H+ F + +WNSII+G N + ++
Sbjct: 351 SFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFL 410
Query: 325 FRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIR-LGFDDNKFIASSLVDMYA 383
++ML + P ++ +S++P A + L GK+ H I+R + D + +SLVDMYA
Sbjct: 411 LKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYA 470
Query: 384 KCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMA 443
K G I A+ +FD + RD V +T++I G G A++ F+ M G++P +V +A
Sbjct: 471 KSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVA 530
Query: 444 VLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQ 503
VL+ACSH+ LV EG F ME F I LEHY+ + DL RAG L++A D + +
Sbjct: 531 VLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYE 590
Query: 504 PTGSVWSTLLAACRAHKSVELAEKVVDKILL-VDPENMGAYVLMSNIYSAAKRWKDAAKL 562
P+ ++ +TLL AC H + + E DK+LL PE++G Y+L++++Y+ W +
Sbjct: 591 PSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTV 650
Query: 563 RIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYD 600
+ + G++K + +E ++ L G+ + P D
Sbjct: 651 KTLLSDLGVQKAHEFALMETDSE----LDGENNKPMND 684
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 163/391 (41%), Gaps = 81/391 (20%)
Query: 202 VSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGY 261
+ WN +I +N F+E++ + + M ++ D FT S++ A +D G +HG
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 262 AIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSII------------ 309
++++ ++LI MY + +V+ + R F + RDA+SWN+II
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEA 269
Query: 310 -----------------------AGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPA 346
GC++ G + + M V+ V+ + + A
Sbjct: 270 FKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKA 329
Query: 347 CAHLTALNLGKQLHGCIIR-LGFD-DNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMV 404
C+H+ AL GK H +IR F D + +SL+ MY++C +++ A +F ++E +
Sbjct: 330 CSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLS 389
Query: 405 AWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG------- 457
W +II G A + + + L ++ML G P ++ ++L + G + G
Sbjct: 390 TWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYI 449
Query: 458 ------------W-----------------KYFNSMEKDFRIAPGLEHYAAVADLLGRAG 488
W + F+SM K ++ Y ++ D GR G
Sbjct: 450 LRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVT-----YTSLIDGYGRLG 504
Query: 489 RLEEAYDFISNM---GIQPTGSVWSTLLAAC 516
+ E A + +M GI+P +L+AC
Sbjct: 505 KGEVALAWFKDMDRSGIKPDHVTMVAVLSAC 535
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 103/216 (47%)
Query: 237 FTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYL 296
++ +S+L + V G ++H + I G + D + L+ Y+ N ++ +
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 297 LPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLG 356
+ WN +I ++N +F + + +++M+ ++ + ++ SVI ACA L G
Sbjct: 144 SEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYG 203
Query: 357 KQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMH 416
+ +HG I N ++ ++L+ MY + G + +AR +FD++ RD V+W AII
Sbjct: 204 RVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSE 263
Query: 417 GHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAG 452
+A L ++M GV V + + C AG
Sbjct: 264 EKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 150/518 (28%), Positives = 253/518 (48%), Gaps = 27/518 (5%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M + GI +PS++KA +LY NAL++MY +
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMY---KR 231
Query: 162 LGGFGSANKVFDENPQRGK-------GCKCEIDSVRKVFDLMP-------ARDVVSWNTV 207
G A ++FD +R C + + + F L+ +V+WNT+
Sbjct: 232 FGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTI 291
Query: 208 IAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVK-GMEIHGYAIRH- 265
G + G + AL+ V M + ++ S + + L H+ +K G H IR
Sbjct: 292 AGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKA-CSHIGALKWGKVFHCLVIRSC 350
Query: 266 GFDGDV-FIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGF 324
F D+ + +SLI MY++C+ + H+ F + +WNSII+G N + ++
Sbjct: 351 SFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFL 410
Query: 325 FRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIR-LGFDDNKFIASSLVDMYA 383
++ML + P ++ +S++P A + L GK+ H I+R + D + +SLVDMYA
Sbjct: 411 LKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYA 470
Query: 384 KCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMA 443
K G I A+ +FD + RD V +T++I G G A++ F+ M G++P +V +A
Sbjct: 471 KSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVA 530
Query: 444 VLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQ 503
VL+ACSH+ LV EG F ME F I LEHY+ + DL RAG L++A D + +
Sbjct: 531 VLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYE 590
Query: 504 PTGSVWSTLLAACRAHKSVELAEKVVDKILL-VDPENMGAYVLMSNIYSAAKRWKDAAKL 562
P+ ++ +TLL AC H + + E DK+LL PE++G Y+L++++Y+ W +
Sbjct: 591 PSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTV 650
Query: 563 RIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYD 600
+ + G++K + +E ++ L G+ + P D
Sbjct: 651 KTLLSDLGVQKAHEFALMETDSE----LDGENNKPMND 684
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 163/391 (41%), Gaps = 81/391 (20%)
Query: 202 VSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGY 261
+ WN +I +N F+E++ + + M ++ D FT S++ A +D G +HG
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 262 AIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSII------------ 309
++++ ++LI MY + +V+ + R F + RDA+SWN+II
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEA 269
Query: 310 -----------------------AGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPA 346
GC++ G + + M V+ V+ + + A
Sbjct: 270 FKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKA 329
Query: 347 CAHLTALNLGKQLHGCIIR-LGFD-DNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMV 404
C+H+ AL GK H +IR F D + +SL+ MY++C +++ A +F ++E +
Sbjct: 330 CSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLS 389
Query: 405 AWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG------- 457
W +II G A + + + L ++ML G P ++ ++L + G + G
Sbjct: 390 TWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYI 449
Query: 458 ------------W-----------------KYFNSMEKDFRIAPGLEHYAAVADLLGRAG 488
W + F+SM K ++ Y ++ D GR G
Sbjct: 450 LRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVT-----YTSLIDGYGRLG 504
Query: 489 RLEEAYDFISNM---GIQPTGSVWSTLLAAC 516
+ E A + +M GI+P +L+AC
Sbjct: 505 KGEVALAWFKDMDRSGIKPDHVTMVAVLSAC 535
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 103/216 (47%)
Query: 237 FTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYL 296
++ +S+L + V G ++H + I G + D + L+ Y+ N ++ +
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 297 LPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLG 356
+ WN +I ++N +F + + +++M+ ++ + ++ SVI ACA L G
Sbjct: 144 SEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYG 203
Query: 357 KQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMH 416
+ +HG I N ++ ++L+ MY + G + +AR +FD++ RD V+W AII
Sbjct: 204 RVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSE 263
Query: 417 GHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAG 452
+A L ++M GV V + + C AG
Sbjct: 264 EKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 130/429 (30%), Positives = 217/429 (50%), Gaps = 37/429 (8%)
Query: 187 DSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIF 246
D +VF + +V+ +N +I + G E+L M + D +T + +L
Sbjct: 53 DYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSC 112
Query: 247 AEHVDVVKGMEIHGYAIRHGFD--GDVFIGSSLIDMYAKCNR------------------ 286
+ D+ G +HG IR GF G + IG ++++Y R
Sbjct: 113 SSLSDLRFGKCVHGELIRTGFHRLGKIRIG--VVELYTSGGRMGDAQKVFDEMSERNVVV 170
Query: 287 -------------VEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKV 333
VE L F + R +SWNS+I+ + G+ + + F +M+
Sbjct: 171 WNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGF 230
Query: 334 KPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLG-FDDNKFIASSLVDMYAKCGNIKMAR 392
P + + +V+P A L L+ GK +H G F D + ++LVD Y K G+++ A
Sbjct: 231 DPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAAT 290
Query: 393 YIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDG-VRPCYVAFMAVLTACSHA 451
IF K++ R++V+W +I G A++G + LF+ M+E+G V P F+ VL CS+
Sbjct: 291 AIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYT 350
Query: 452 GLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWST 511
G V+ G + F M + F++ EHY A+ DL+ R+GR+ EA+ F+ NM + ++W +
Sbjct: 351 GQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGS 410
Query: 512 LLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGL 571
LL+ACR+H V+LAE +++ ++P N G YVL+SN+Y+ RW+D K+R M+ L
Sbjct: 411 LLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRL 470
Query: 572 KKTPACSWI 580
+K+ S I
Sbjct: 471 RKSTGQSTI 479
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 130/308 (42%), Gaps = 32/308 (10%)
Query: 257 EIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNG 316
EIH + +RH G + + I + + +++ R F + + + +N++I G
Sbjct: 22 EIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVG 81
Query: 317 KFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIAS 376
+ + FF M + + +++ ++ +C+ L+ L GK +HG +IR GF I
Sbjct: 82 PPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRI 141
Query: 377 SLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMG-C-------AMH------------ 416
+V++Y G + A+ +FD++ R++V W +I G C +H
Sbjct: 142 GVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVS 201
Query: 417 -----------GHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSME 465
G +A+ LF +M++ G P + VL + G++D G ++ E
Sbjct: 202 WNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAE 261
Query: 466 KDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELA 525
+ A+ D ++G LE A M + S W+TL++ + E
Sbjct: 262 SSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVS-WNTLISGSAVNGKGEFG 320
Query: 526 EKVVDKIL 533
+ D ++
Sbjct: 321 IDLFDAMI 328
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 30/199 (15%)
Query: 141 GLDFDLYT-ANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPAR 199
GL D T NAL++ YCK +L ++ +F M R
Sbjct: 264 GLFKDFITVGNALVDFYCKSGDL------------------------EAATAIFRKMQRR 299
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDD-KLKPDSFTLSSILPIFAEHVDVVKGMEI 258
+VVSWNT+I+G+A NG +D+ M ++ K+ P+ T +L + V +G E+
Sbjct: 300 NVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEEL 359
Query: 259 HGYAI-RHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR-DAISWNSIIAGCVQNG 316
G + R + +++D+ ++ R+ + + +P +A W S+++ C +G
Sbjct: 360 FGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHG 419
Query: 317 KFDQGIGFFRQMLKAKVKP 335
D + M K++P
Sbjct: 420 --DVKLAEVAAMELVKIEP 436
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 128/405 (31%), Positives = 219/405 (54%), Gaps = 13/405 (3%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSIL- 243
+++ R FD M RD+VSWN +I G N + + + M + KPD FT S+L
Sbjct: 163 KMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLR 222
Query: 244 -PIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDA 302
I + +++V E+HG AI+ GF + SL++ Y KC + ++ + RD
Sbjct: 223 ASIVVKCLEIVS--ELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDL 280
Query: 303 ISWNSIIAG-CVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
+S ++I G QN F+ M++ K K +V SS++ C + ++ +G+Q+HG
Sbjct: 281 LSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHG 340
Query: 362 CIIR---LGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGH 418
++ + FD + +SL+DMYAK G I+ A F++++ +D+ +WT++I G HG+
Sbjct: 341 FALKSSQIRFD--VALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGN 398
Query: 419 ALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYA 478
A+ L+ +M + ++P V F+++L+ACSH G + GWK +++M I EH +
Sbjct: 399 FEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLS 458
Query: 479 AVADLLGRAGRLEEAYDFI-SNMGI-QPTGSVWSTLLAACRAHKSVELAEKVVDKILLVD 536
+ D+L R+G LEEAY I S GI + S W L ACR H +V+L++ ++L ++
Sbjct: 459 CIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSME 518
Query: 537 PENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKG-LKKTPACSWI 580
P Y+ ++++Y+A W +A R M+ G K P S +
Sbjct: 519 PRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 184/384 (47%), Gaps = 35/384 (9%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP 244
++ RK+FD + RDVVSW +I+ ++ G +AL + +EM + +K + FT S+L
Sbjct: 62 DVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLK 121
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS 304
+ + +GM+IHG + G++ + S+L+ +YA+C ++E + F + RD +S
Sbjct: 122 SCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVS 181
Query: 305 WNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCII 364
WN++I G N D F+ ML KP +F S++ A + L + +LHG I
Sbjct: 182 WNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAI 241
Query: 365 RLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHAL-DAV 423
+LGF + + SLV+ Y KCG++ A + + + RD+++ TA+I G + + DA
Sbjct: 242 KLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAF 301
Query: 424 SLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKY----FNSMEKDFRIAPG---LEH 476
+F+ M+ + V ++L C+ V G + S + F +A G ++
Sbjct: 302 DIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDM 361
Query: 477 YAAVADL------------------------LGRAGRLEEAYDFISNMG---IQPTGSVW 509
YA ++ GR G E+A D + M I+P +
Sbjct: 362 YAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTF 421
Query: 510 STLLAACRAHKSVELAEKVVDKIL 533
+LL+AC EL K+ D ++
Sbjct: 422 LSLLSACSHTGQTELGWKIYDTMI 445
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 108/190 (56%)
Query: 258 IHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGK 317
IHG +I +GF ++ + LID+Y K V+H+ + F + RD +SW ++I+ + G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 318 FDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASS 377
+ F++M + VK Q ++ SV+ +C L L G Q+HG + + N + S+
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSA 153
Query: 378 LVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPC 437
L+ +YA+CG ++ AR FD ++ RD+V+W A+I G + A + SLF+ ML +G +P
Sbjct: 154 LLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPD 213
Query: 438 YVAFMAVLTA 447
F ++L A
Sbjct: 214 CFTFGSLLRA 223
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 81/143 (56%), Gaps = 4/143 (2%)
Query: 354 NLGKQL---HGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAII 410
N+ KQL HG I GF N + L+D+Y K G++K AR +FD+I RD+V+WTA+I
Sbjct: 26 NVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMI 85
Query: 411 MGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRI 470
+ G+ DA+ LF++M + V+ + +VL +C G + EG + S+EK
Sbjct: 86 SRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKG-NC 144
Query: 471 APGLEHYAAVADLLGRAGRLEEA 493
A L +A+ L R G++EEA
Sbjct: 145 AGNLIVRSALLSLYARCGKMEEA 167
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 36/212 (16%)
Query: 144 FDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVS 203
FD+ N+L++MY K EI+ F+ M +DV S
Sbjct: 350 FDVALGNSLIDMYAK------------------------SGEIEDAVLAFEEMKEKDVRS 385
Query: 204 WNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAI 263
W ++IAG ++G F +A+D+ M +++KP+ T S+L + G +I+ I
Sbjct: 386 WTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMI 445
Query: 264 -RHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAI------SWNSIIAGCVQNG 316
+HG + S +IDM A+ +E A+ L+ ++ I +W + + C ++G
Sbjct: 446 NKHGIEAREEHLSCIIDMLARSGYLEE---AYALIRSKEGIVSLSSSTWGAFLDACRRHG 502
Query: 317 KFDQGIGFFRQMLKAKV-KPMQ-VSFSSVIPA 346
Q+L + KP+ ++ +SV A
Sbjct: 503 NVQLSKVAATQLLSMEPRKPVNYINLASVYAA 534
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 218 bits (556), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 125/367 (34%), Positives = 182/367 (49%), Gaps = 19/367 (5%)
Query: 347 CAHLTALNLGKQLHG----CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRD 402
C L K +HG + L N L++MY+ CG A +F+K+ ++
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHV----LLEMYSNCGLANEAASVFEKMSEKN 319
Query: 403 MVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFN 462
+ W II A +G DA+ +F + E+G P F + AC G VDEG +F
Sbjct: 320 LETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFE 379
Query: 463 SMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSV 522
SM +D+ IAP +E Y ++ ++ G L+EA +F+ M ++P VW TL+ R H ++
Sbjct: 380 SMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNL 439
Query: 523 ELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEI 582
EL + + + +DP + I A D K + RS L +
Sbjct: 440 ELGDYCAEVVEFLDPTRLNKQSREGFIPVKA---SDVEKESLKKRSGILHG--------V 488
Query: 583 GNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHS 642
+ + F AGD + P D++ + L L M + GYV +T LHD+D E K LL HS
Sbjct: 489 KSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHS 548
Query: 643 ERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGS 702
ER+A A VIKN+RVCVDCH A+K +S IVGRE++ RD RFH NG+
Sbjct: 549 ERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGA 608
Query: 703 CSCGDYW 709
C+C DYW
Sbjct: 609 CTCKDYW 615
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 216 bits (550), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 211/395 (53%), Gaps = 1/395 (0%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
I K+F +P D+ WN +I G G + + +++ M +P+ +T+ ++
Sbjct: 157 IVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSG 216
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISW 305
+ ++ +H + ++ D ++G +L++MY++C + + F + D ++
Sbjct: 217 LIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVAC 276
Query: 306 NSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIR 365
+S+I G + G + + F ++ + KP V + V+ +CA L+ GK++H +IR
Sbjct: 277 SSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIR 336
Query: 366 LGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSL 425
LG + + + S+L+DMY+KCG +K A +F I +++V++ ++I+G +HG A A
Sbjct: 337 LGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEK 396
Query: 426 FEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLG 485
F ++LE G+ P + F A+L C H+GL+++G + F M+ +F I P EHY + L+G
Sbjct: 397 FTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMG 456
Query: 486 RAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAY-V 544
AG+LEEA++F+ ++ + LL+ C H++ LAE V + I E Y V
Sbjct: 457 MAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKV 516
Query: 545 LMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSW 579
++SN+Y+ RW + +LR + K P SW
Sbjct: 517 MLSNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 186/420 (44%), Gaps = 39/420 (9%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP 244
++ S RK+FD+ P R V WN++I A+ F L + ++ +PD+FT + +
Sbjct: 55 DLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLAR 114
Query: 245 IFAEHVDVVKGME-IHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAI 303
F+E D KG+ IHG AI G D GS+++ Y+K + + + F +P D
Sbjct: 115 GFSESFD-TKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLA 173
Query: 304 SWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCI 363
WN +I G G +D+GI F M +P + ++ + L + +H
Sbjct: 174 LWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFC 233
Query: 364 IRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAV 423
+++ D + ++ +LV+MY++C I A +F+ I D+VA +++I G + G+ +A+
Sbjct: 234 LKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEAL 293
Query: 424 SLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFN-----SMEKDFRIAPGL---- 474
LF ++ G +P V VL +C+ G + + +E D ++ L
Sbjct: 294 HLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMY 353
Query: 475 ----------EHYAAVAD--------------LLGRAGRLEEAYDFISNMGIQPTGSVWS 510
+A + + L G A E + I MG+ P +S
Sbjct: 354 SKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFS 413
Query: 511 TLLAACRAHKSVELAEKVVDKI---LLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMR 567
LL C + +++ +++ ++P+ YV M + A + ++A + + ++
Sbjct: 414 ALLCTCCHSGLLNKGQEIFERMKSEFGIEPQT-EHYVYMVKLMGMAGKLEEAFEFVMSLQ 472
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 24/218 (11%)
Query: 142 LDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDV 201
LD Y AL+NMY + C C I S VF+ + D+
Sbjct: 238 LDSHSYVGCALVNMYSR-----------------------CMC-IASACSVFNSISEPDL 273
Query: 202 VSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGY 261
V+ +++I G ++ G +EAL + E+ KPD ++ +L AE D V G E+H Y
Sbjct: 274 VACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSY 333
Query: 262 AIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQG 321
IR G + D+ + S+LIDMY+KC ++ ++ F +P ++ +S+NS+I G +G
Sbjct: 334 VIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTA 393
Query: 322 IGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQL 359
F ++L+ + P +++FS+++ C H LN G+++
Sbjct: 394 FEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEI 431
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 7/200 (3%)
Query: 257 EIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNG 316
++H + + D + + L YA + + + + F + P R WNSII +
Sbjct: 26 KLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAH 85
Query: 317 KFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIAS 376
+F + F Q+L++ +P +++ + + + +HG I G ++ S
Sbjct: 86 QFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGS 145
Query: 377 SLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRP 436
++V Y+K G I A +F I D+ W +I+G G ++LF M G +P
Sbjct: 146 AIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQP 205
Query: 437 -CYVAFMAVLTACSHAGLVD 455
CY M LT +GL+D
Sbjct: 206 NCYT--MVALT----SGLID 219
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 216 bits (549), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 121/347 (34%), Positives = 186/347 (53%), Gaps = 9/347 (2%)
Query: 232 LKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSL 291
L D FTL++++ +++ + +++ + DV + LID K + +
Sbjct: 148 LLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQR----DVVTYNVLIDGLVKAREIVRAR 203
Query: 292 RAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLT 351
F +P RD +SWNS+I+G Q + I F +M+ +KP V+ S + ACA
Sbjct: 204 ELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSG 263
Query: 352 ALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIM 411
GK +H R + F+A+ LVD YAKCG I A IF+ + + W A+I
Sbjct: 264 DWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMIT 323
Query: 412 GCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIA 471
G AMHG+ V F KM+ G++P V F++VL CSH+GLVDE F+ M + +
Sbjct: 324 GLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVN 383
Query: 472 PGLEHYAAVADLLGRAGRLEEAYDFISNM----GIQPTGSVWSTLLAACRAHKSVELAEK 527
++HY +ADLLGRAG +EEA + I M G + WS LL CR H ++E+AEK
Sbjct: 384 REMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEK 443
Query: 528 VVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLR-IHMRSKGLKK 573
+++ + PE+ G Y +M +Y+ A+RW++ K+R I R K +KK
Sbjct: 444 AANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKK 490
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 166/336 (49%), Gaps = 23/336 (6%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXX--XXXXXGLDFDLYTANALMNMYCKV 159
MR + P H FP + KA GL DL+T N L+ +Y +
Sbjct: 106 MRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLI 165
Query: 160 QNLGGFGSANKVFDENPQR----------GKGCKCEIDSVRKVFDLMPARDVVSWNTVIA 209
+ SA ++FDENPQR G EI R++FD MP RD+VSWN++I+
Sbjct: 166 APID---SALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLIS 222
Query: 210 GNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDG 269
G AQ REA+ + EM LKPD+ + S L A+ D KG IH Y R
Sbjct: 223 GYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFI 282
Query: 270 DVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQML 329
D F+ + L+D YAKC ++ ++ F L + +WN++I G +G + + +FR+M+
Sbjct: 283 DSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMV 342
Query: 330 KAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIA--SSLVDMYAKCGN 387
+ +KP V+F SV+ C+H ++ + L + L +D N+ + + D+ + G
Sbjct: 343 SSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSL-YDVNREMKHYGCMADLLGRAGL 401
Query: 388 IKMARYIFDKI-----ETRDMVAWTAIIMGCAMHGH 418
I+ A + +++ ++AW+ ++ GC +HG+
Sbjct: 402 IEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGN 437
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 125/385 (32%), Positives = 198/385 (51%), Gaps = 33/385 (8%)
Query: 327 QMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCG 386
++L P + F + +CA+L +L K++H ++ F + + + ++ M+ +C
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 387 NIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLT 446
+I A+ +FD + +DM +W ++ + +G DA+ LFE+M + G++P F+ V
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 447 ACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTG 506
AC+ G ++E + +F+SM+ + I+P EHY V +LG+ G L EA +I ++ +PT
Sbjct: 346 ACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTA 405
Query: 507 SVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHM 566
W + R H ++L + + + ++ VDP V+ K +K+ +
Sbjct: 406 DFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKA---VINKIPTPPPKSFKETNMV---- 458
Query: 567 RSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEG--YVLDTSE 624
T +E N TF Y D+ E K+G YV DT
Sbjct: 459 -------TSKSRILEFRNL--TF--------YKDEAKEM-------AAKKGVVYVPDTRF 494
Query: 625 VLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVG 684
VLHD+D E K L HSERLAIA+ +IKN+RVC DCH IK +SKI+G
Sbjct: 495 VLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIG 554
Query: 685 REIVVRDNSRFHHFMNGSCSCGDYW 709
R ++VRDN RFHHF +G CSCGDYW
Sbjct: 555 RVLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 98/230 (42%), Gaps = 23/230 (10%)
Query: 213 QNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVF 272
Q ++++A++++ D PD + A + ++H + ++ F GD
Sbjct: 217 QRRLYKDAIELL----DKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPK 272
Query: 273 IGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAK 332
+ + +I M+ +C+ + + R F + +D SW+ ++ NG D + F +M K
Sbjct: 273 LNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHG 332
Query: 333 VKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDD--NKFIASSLVDMY-------A 383
+KP + +F +V ACA + + L FD N+ S + Y
Sbjct: 333 LKPNEETFLTVFLACATVGGIEEA--------FLHFDSMKNEHGISPKTEHYLGVLGVLG 384
Query: 384 KCGN-IKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLED 432
KCG+ ++ +YI D W A+ +HG +D E+++ D
Sbjct: 385 KCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHG-DIDLEDYMEELMVD 433
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 213/401 (53%), Gaps = 11/401 (2%)
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHV 250
+ F+ +P +DV+SWN++++ A G ++LD+ +M +P S L + +
Sbjct: 270 RSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNS 329
Query: 251 DVVKGMEIHGYAIRHGFD-GDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSII 309
D+ G +IH Y ++ GFD + + S+LIDMY KCN +E+S + LP + NS++
Sbjct: 330 DIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLM 389
Query: 310 AGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCI------ 363
+ G I F M+ +V+ S+V+ A +L+L + LH C
Sbjct: 390 TSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKA----LSLSLPESLHSCTLVHCCA 445
Query: 364 IRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAV 423
I+ G+ + ++ SL+D Y K G +++R +FD+++T ++ T+II G A +G D V
Sbjct: 446 IKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCV 505
Query: 424 SLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADL 483
+ +M + P V ++VL+ CSH+GLV+EG F+S+E + I+PG + YA + DL
Sbjct: 506 KMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDL 565
Query: 484 LGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAY 543
LGRAG +E+A + WS+LL +CR H++ + + + ++ ++PEN Y
Sbjct: 566 LGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVY 625
Query: 544 VLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGN 584
+ +S Y ++ + ++R S+ L + S + + N
Sbjct: 626 IQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSVVVKN 666
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 186/367 (50%), Gaps = 9/367 (2%)
Query: 169 NKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMG 228
N+ DE + G + S + FD M RDVV++N +I+GN++ G A+++ EM
Sbjct: 50 NRRIDELIKSGN-----LLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMV 104
Query: 229 DDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVE 288
L+ + T S+L + ++ + +G+++H I GF ++F+ S+L+ +YA V+
Sbjct: 105 SCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVD 164
Query: 289 HSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACA 348
+L+ F + R+ N ++ Q G+ + + +M V +++ +I C+
Sbjct: 165 VALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCS 224
Query: 349 HLTALNLGKQLHGCIIRLGFD-DNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWT 407
H + GKQLH +++ G++ N F+A+ LVD Y+ CG++ + F+ + +D+++W
Sbjct: 225 HDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWN 284
Query: 408 AIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKD 467
+I+ CA +G LD++ LF KM G RP FM+ L CS + G + + K
Sbjct: 285 SIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKM 344
Query: 468 FRIAPGLEHYAAVADLLGRAGRLEEA---YDFISNMGIQPTGSVWSTLLAACRAHKSVEL 524
L +A+ D+ G+ +E + Y + + ++ S+ ++L+ +E+
Sbjct: 345 GFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEM 404
Query: 525 AEKVVDK 531
++D+
Sbjct: 405 FGLMIDE 411
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 19/261 (7%)
Query: 271 VFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLK 330
V+ + ID K + + AF + RD +++N +I+G + G + I + +M+
Sbjct: 46 VYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS 105
Query: 331 AKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKM 390
++ +F SV+ C+ G Q+H +I LGF N F+ S+LV +YA + +
Sbjct: 106 CGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDV 165
Query: 391 ARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSH 450
A +FD++ R++ ++ G + ++ +M +GV + + ++ CSH
Sbjct: 166 ALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSH 225
Query: 451 AGLVDEGWKYFNSMEKD-------FRIAPGLEHYAAVADLLG--RAGRLEEAYDFISNMG 501
LV EG + + + K F +++Y+A DL G R+ D IS
Sbjct: 226 DRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVIS--- 282
Query: 502 IQPTGSVWSTLLAACRAHKSV 522
W+++++ C + SV
Sbjct: 283 -------WNSIVSVCADYGSV 296
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 225/471 (47%), Gaps = 67/471 (14%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
++ KVFD MP DV+SWN++++G Q+G F+E + + E+ + P+ F+ ++ L
Sbjct: 106 LEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAA 165
Query: 246 FAEHVDVVKGMEIHGYAIRHGFD-GDVFIGSSLIDMYAKCN------------------- 285
A G IH ++ G + G+V +G+ LIDMY KC
Sbjct: 166 CARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVS 225
Query: 286 ------------RVEHSLRAFYLLPYRDAI------------------------------ 303
++E L F+ +P D +
Sbjct: 226 WNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNS 285
Query: 304 -SWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGC 362
SWN+I+ G V + K + FF +M + V+ + S S V+ A A L + G +H C
Sbjct: 286 SSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHAC 345
Query: 363 IIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDA 422
+LG D +AS+L+DMY+KCG +K A +F + ++++ W +I G A +G +++A
Sbjct: 346 AHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEA 405
Query: 423 VSLFEKMLEDG-VRPCYVAFMAVLTACSHAGLVDE-GWKYFNSMEKDFRIAPGLEHYAAV 480
+ LF ++ ++ ++P F+ +L CSH + E YF M ++RI P +EH ++
Sbjct: 406 IKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSL 465
Query: 481 ADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENM 540
+G+ G + +A I G G W LL AC A K ++ A+ V K++ + +
Sbjct: 466 IRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADK 525
Query: 541 GA--YVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTF 589
Y++MSN+Y+ +RW++ ++R MR G+ K SWI+ K ++
Sbjct: 526 DEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWIDSRTKCSSY 576
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 159/329 (48%), Gaps = 50/329 (15%)
Query: 203 SWNTVIAGNAQNG---MFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
SW+T++ A+ G + R A++++ +D KPD+ L +L + + V ++H
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELI----NDGEKPDASPLVHLLRVSGNYGYVSLCRQLH 78
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFD 319
GY +HGF + + +SL+ Y + +E + + F +P D ISWNS+++G VQ+G+F
Sbjct: 79 GYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQ 138
Query: 320 QGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDD-NKFIASSL 378
+GI F ++ ++ V P + SF++ + ACA L LG +H +++LG + N + + L
Sbjct: 139 EGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCL 198
Query: 379 VDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCY 438
+DMY KCG + A +F +E +D V+W AI+
Sbjct: 199 IDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIV---------------------------- 230
Query: 439 VAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFIS 498
+CS G ++ G +F+ M P Y + D ++G A+ +S
Sbjct: 231 -------ASCSRNGKLELGLWFFHQMPN-----PDTVTYNELIDAFVKSGDFNNAFQVLS 278
Query: 499 NMGIQPTGSVWSTLLAA-CRAHKSVELAE 526
+M P S W+T+L + KS E E
Sbjct: 279 DMP-NPNSSSWNTILTGYVNSEKSGEATE 306
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 125/256 (48%), Gaps = 10/256 (3%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP 244
+ ++ +V MP + SWNT++ G + EA + +M ++ D ++LS +L
Sbjct: 269 DFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLA 328
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS 304
A V G IH A + G D V + S+LIDMY+KC ++H+ F+ +P ++ I
Sbjct: 329 AVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIV 388
Query: 305 WNSIIAGCVQNGKFDQGIGFFRQMLKAK-VKPMQVSFSSVIPACAHLTALNLGKQLHGCI 363
WN +I+G +NG + I F Q+ + + +KP + +F +++ C+H + ++
Sbjct: 389 WNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSH---CEVPMEVMLGY 445
Query: 364 IRLGFDDNKFIAS-----SLVDMYAKCGNIKMARYIFDKIE-TRDMVAWTAIIMGCAMHG 417
+ ++ + S SL+ + G + A+ + + D VAW A++ C+
Sbjct: 446 FEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARK 505
Query: 418 HALDAVSLFEKMLEDG 433
A ++ KM+E G
Sbjct: 506 DLKAAKTVAAKMIELG 521
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 190/343 (55%), Gaps = 17/343 (4%)
Query: 255 GMEIHGYAIRHGFDGDV-FIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAG-C 312
G +HG + GF + IG++L+ YAK + ++ + F +P R +++WN++I G C
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYC 189
Query: 313 VQNGKFD----QGIGFFRQM--LKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRL 366
K + + + FR+ + V+P + V+ A + L +G +HG I +L
Sbjct: 190 SHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKL 249
Query: 367 GF--DDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVS 424
GF + + FI ++LVDMY+KCG + A +F+ ++ +++ WT++ G A++G + +
Sbjct: 250 GFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPN 309
Query: 425 LFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLL 484
L +M E G++P + F ++L+A H GLV+EG + F SM+ F + P +EHY + DLL
Sbjct: 310 LLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLL 369
Query: 485 GRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGA-- 542
G+AGR++EAY FI M I+P + +L AC + + E++ +L ++ E+
Sbjct: 370 GKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSG 429
Query: 543 -----YVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWI 580
YV +SN+ + +W + KLR M+ + +K P S++
Sbjct: 430 SECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 127/253 (50%), Gaps = 11/253 (4%)
Query: 190 RKVFDLMPARDVVSWNTVIAG-----NAQNGMFREALDMVREMG--DDKLKPDSFTLSSI 242
RKVFD MP R V+WN +I G + N R+A+ + R ++P T+ +
Sbjct: 167 RKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCV 226
Query: 243 LPIFAEHVDVVKGMEIHGYAIRHGF--DGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR 300
L ++ + G +HGY + GF + DVFIG++L+DMY+KC + ++ F L+ +
Sbjct: 227 LSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVK 286
Query: 301 DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLH 360
+ +W S+ G NG+ ++ +M ++ +KP +++F+S++ A H+ + G +L
Sbjct: 287 NVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELF 346
Query: 361 GCI-IRLGFDDNKFIASSLVDMYAKCGNIKMA-RYIFDKIETRDMVAWTAIIMGCAMHGH 418
+ R G +VD+ K G I+ A ++I D + ++ C+++G
Sbjct: 347 KSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGE 406
Query: 419 ALDAVSLFEKMLE 431
+ + + +LE
Sbjct: 407 TVMGEEIGKALLE 419
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 88/170 (51%), Gaps = 12/170 (7%)
Query: 353 LNLGKQLHGCIIRLGF-DDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIM 411
L +G+ +HG + +LGF +++ I ++L+ YAK G+++ AR +FD++ R V W A+I
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 412 GCAMHG-----HALDAVSLFEKM--LEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSM 464
G H +A A+ LF + GVRP + VL+A S GL++ G +
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 465 EKDFRIAPGLEHY--AAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTL 512
EK P ++ + A+ D+ + G L A+ M ++ + W+++
Sbjct: 247 EK-LGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFT-WTSM 294
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 92/202 (45%), Gaps = 28/202 (13%)
Query: 143 DFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVV 202
+ D++ AL++MY K C C +++ VF+LM ++V
Sbjct: 254 EVDVFIGTALVDMYSK-----------------------CGC-LNNAFSVFELMKVKNVF 289
Query: 203 SWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVV-KGMEI-HG 260
+W ++ G A NG E +++ M + +KP+ T +S+L + H+ +V +G+E+
Sbjct: 290 TWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAY-RHIGLVEEGIELFKS 348
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR-DAISWNSIIAGCVQNGKFD 319
R G + ++D+ K R++ + + +P + DAI S+ C G+
Sbjct: 349 MKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETV 408
Query: 320 QGIGFFRQMLKAKVKPMQVSFS 341
G + +L+ + + ++S S
Sbjct: 409 MGEEIGKALLEIEREDEKLSGS 430
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 117/364 (32%), Positives = 180/364 (49%), Gaps = 18/364 (4%)
Query: 347 CAHLTALNLGKQLHGCIIR-LGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVA 405
C AL K +H I +G D +S+++MY+ CG+++ A +F+ + R++
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDIS-AYNSIIEMYSGCGSVEDALTVFNSMPERNLET 249
Query: 406 WTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSME 465
W +I A +G DA+ F + ++G +P F + AC G ++EG +F SM
Sbjct: 250 WCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMY 309
Query: 466 KDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELA 525
K++ I P +EHY ++ +L G L+EA F+ +M +P +W TL+ R H + L
Sbjct: 310 KEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILG 367
Query: 526 EKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNK 585
++ D + +D + S + D K ++ +KG
Sbjct: 368 DRCQDMVEQLDASRLNK---ESKAGLVPVKSSDLVKEKLQRMAKGPNYG----------- 413
Query: 586 VHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERL 645
+ AGD S P ++ AL L E M + GYV + LHDVD E K + L H+ER
Sbjct: 414 IRYMAAGDISRPENRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERF 473
Query: 646 AIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSC 705
A RV+KN+RVC DCH A+K +SKIVGRE++ RD RFHH +G CSC
Sbjct: 474 AFISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSC 533
Query: 706 GDYW 709
+YW
Sbjct: 534 REYW 537
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%)
Query: 270 DVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQML 329
D+ +S+I+MY+ C VE +L F +P R+ +W +I +NG+ + I F +
Sbjct: 215 DISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFK 274
Query: 330 KAKVKPMQVSFSSVIPACAHLTALNLG 356
+ KP F + AC L +N G
Sbjct: 275 QEGNKPDGEMFKEIFFACGVLGDMNEG 301
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 195 bits (496), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 183/351 (52%), Gaps = 36/351 (10%)
Query: 266 GFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFF 325
GF+ V++ ++L+ MY + + + F +P R+ ++WN +I G G F++ + F
Sbjct: 153 GFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFL 212
Query: 326 RQMLKAKV--------------------------------KPMQVSFSSVIPACAHLTAL 353
+M V KP +++ +++PA +L L
Sbjct: 213 EKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDL 272
Query: 354 NLGKQLHGCIIRLGFDDNKF-IASSLVDMYAKCGNIKMARYIFDKIET--RDMVAWTAII 410
+ +H + + GF + +SL+D YAKCG I+ A F +I +++V+WT +I
Sbjct: 273 KMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMI 332
Query: 411 MGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGW-KYFNSMEKDFR 469
A+HG +AVS+F+ M G++P V ++VL ACSH GL +E + ++FN+M +++
Sbjct: 333 SAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYK 392
Query: 470 IAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVV 529
I P ++HY + D+L R GRLEEA + I+ VW LL AC + ELAE+V
Sbjct: 393 ITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVT 452
Query: 530 DKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWI 580
K++ ++ + G YVLMSNI+ R+ DA + R M +G+ K P S +
Sbjct: 453 RKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 145/308 (47%), Gaps = 20/308 (6%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQR----------GKGCKCEIDSVR 190
G + +Y AL+ MY N+ A+KVFDE P+R G + +
Sbjct: 153 GFESHVYVQTALVGMYLVGGNMI---DAHKVFDEMPERNPVTWNVMITGLTNLGDFEKAL 209
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREM-GDDKLKPDSFTLSSILPIFAEH 249
+ MP R VVSW T+I G A+ +EA+ + M D +KP+ T+ +ILP
Sbjct: 210 CFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNL 269
Query: 250 VDVVKGMEIHGYAIRHGF-DGDVFIGSSLIDMYAKCNRVEHSLRAFYLLP--YRDAISWN 306
D+ +H Y + GF D+ + +SLID YAKC ++ + + F +P ++ +SW
Sbjct: 270 GDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWT 329
Query: 307 SIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAH--LTALNLGKQLHGCII 364
++I+ +G + + F+ M + +KP +V+ SV+ AC+H L + + +
Sbjct: 330 TMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVN 389
Query: 365 RLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRD-MVAWTAIIMGCAMHGHALDAV 423
+ LVDM + G ++ A I +I + V W ++ C+++ A A
Sbjct: 390 EYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAE 449
Query: 424 SLFEKMLE 431
+ K++E
Sbjct: 450 RVTRKLME 457
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 205/450 (45%), Gaps = 65/450 (14%)
Query: 101 AMRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQ 160
+M G SP + + S+L S+ G + + NAL++ Y K
Sbjct: 306 SMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCG 365
Query: 161 NLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNA-QNGMFRE 219
NL + R FD + +++V WN +++G A ++G
Sbjct: 366 NL------------------------EDSRLCFDYIRDKNIVCWNALLSGYANKDGPI-- 399
Query: 220 ALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLID 279
L + +M +P +T S+ L + V + ++H +R G++ + ++ SSL+
Sbjct: 400 CLSLFLQMLQMGFRPTEYTFSTAL----KSCCVTELQQLHSVIVRMGYEDNDYVLSSLMR 455
Query: 280 MYAKCN--------------------------------RVEHSLRAFYLLPYRDAISWNS 307
YAK + S++ L D +SWN
Sbjct: 456 SYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNI 515
Query: 308 IIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLG 367
IA C ++ ++ I F+ ML++ ++P + +F S++ C+ L L LG +HG I +
Sbjct: 516 AIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTD 575
Query: 368 FD-DNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLF 426
F + F+ + L+DMY KCG+I+ +F++ ++++ WTA+I +HG+ +A+ F
Sbjct: 576 FSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKF 635
Query: 427 EKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGR 486
++ L G +P V+F+++LTAC H G+V EG F M KD+ + P ++HY DLL R
Sbjct: 636 KETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLAR 694
Query: 487 AGRLEEAYDFISNMGIQPTGSVWSTLLAAC 516
G L+EA I M VW T L C
Sbjct: 695 NGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 169/335 (50%), Gaps = 11/335 (3%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP 244
E+ KVFD MP R+ VS+NT+I G ++ G +A + EM P+ T+S +L
Sbjct: 64 EVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLS 123
Query: 245 IFAEHVDVVKGMEIHGYAIRHG-FDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAI 303
+DV G ++HG ++++G F D F+G+ L+ +Y + + +E + + F +P++
Sbjct: 124 --CASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLE 181
Query: 304 SWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCI 363
+WN +++ G + + FFR++++ + SF V+ + + L++ KQLH
Sbjct: 182 TWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSA 241
Query: 364 IRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAV 423
+ G D + +SL+ Y KCGN MA +F + D+V+W AII A + L A+
Sbjct: 242 TKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKAL 301
Query: 424 SLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADL 483
LF M E G P +++VL S L+ G + + K+ G+ A+ D
Sbjct: 302 KLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKN-GCETGIVLGNALIDF 360
Query: 484 LGRAGRLEEA---YDFISNMGIQPTGSVWSTLLAA 515
+ G LE++ +D+I + I W+ LL+
Sbjct: 361 YAKCGNLEDSRLCFDYIRDKNI----VCWNALLSG 391
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 171/370 (46%), Gaps = 53/370 (14%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVRE---MGDDKLKPDSFTLSSI 242
++ +VF+ MP + + +WN +++ G +E + RE MG S T SS
Sbjct: 165 LEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGA------SLTESSF 218
Query: 243 LPIFAEHVDVVKGMEI----HGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLP 298
L + + V VK ++I H A + G D ++ + +SLI Y KC + R F
Sbjct: 219 LGVL-KGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAG 277
Query: 299 YRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQ 358
D +SWN+II ++ + + F M + P Q ++ SV+ + + L+ G+Q
Sbjct: 278 SWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQ 337
Query: 359 LHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGH 418
+HG +I+ G + + ++L+D YAKCGN++ +R FD I +++V W A++ G A
Sbjct: 338 IHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDG 397
Query: 419 ALDAVSLFEKMLEDGVRPCYVAFMAVLTACS-------HAGLVDEGWKYFNSMEKDFRIA 471
+ +SLF +ML+ G RP F L +C H+ +V G++ + D+ ++
Sbjct: 398 PI-CLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYE-----DNDYVLS 451
Query: 472 PGLEHYAA-------------------------VADLLGRAGRLEEAYDFISNMGIQPTG 506
+ YA VA + R G+ E+ IS + QP
Sbjct: 452 SLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE-QPDT 510
Query: 507 SVWSTLLAAC 516
W+ +AAC
Sbjct: 511 VSWNIAIAAC 520
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 164/377 (43%), Gaps = 61/377 (16%)
Query: 105 LGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGG 164
+G S T F +LK + GLD ++ N+L++ Y K N
Sbjct: 209 MGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGN--- 265
Query: 165 FGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMV 224
++F + D+VSWN +I A++ +AL +
Sbjct: 266 ---------------------THMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLF 304
Query: 225 REMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKC 284
M + P+ T S+L + + + G +IHG I++G + + +G++LID YAKC
Sbjct: 305 VSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKC 364
Query: 285 NRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVI 344
+E S F + ++ + WN++++G N + F QML+ +P + +FS+ +
Sbjct: 365 GNLEDSRLCFDYIRDKNIVCWNALLSG-YANKDGPICLSLFLQMLQMGFRPTEYTFSTAL 423
Query: 345 PACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFD-------- 396
+C +T L +QLH I+R+G++DN ++ SSL+ YAK + A + D
Sbjct: 424 KSCC-VTEL---QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSV 479
Query: 397 ------------------------KIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLED 432
+E D V+W I C+ + + + LF+ ML+
Sbjct: 480 VPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQS 539
Query: 433 GVRPCYVAFMAVLTACS 449
+RP F+++L+ CS
Sbjct: 540 NIRPDKYTFVSILSLCS 556
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 3/180 (1%)
Query: 271 VFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLK 330
V++ +++I +Y K V + + F +P R+ +S+N+II G + G D+ G F +M
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108
Query: 331 AKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLG-FDDNKFIASSLVDMYAKCGNIK 389
P Q + S ++ +CA L + G QLHG ++ G F + F+ + L+ +Y + ++
Sbjct: 109 FGYLPNQSTVSGLL-SCASLD-VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLE 166
Query: 390 MARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACS 449
MA +F+ + + + W ++ G + + F +++ G +F+ VL S
Sbjct: 167 MAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVS 226
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 189/382 (49%), Gaps = 46/382 (12%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP 244
E+ S + FD+M +DV+SW VI+ ++ G +A+ M M + P+ FT+ SIL
Sbjct: 233 ELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILK 292
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS 304
+E + G ++H ++ DVF+G+SL+DMYAKC + + F + R+ ++
Sbjct: 293 ACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVT 352
Query: 305 WNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCII 364
W SIIA + G ++ I FR M + + ++ S++ AC + AL LGK+LH II
Sbjct: 353 WTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQII 412
Query: 365 RLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVS 424
+ + N +I S+LV +Y KCG + A + ++ +RD+V+WTA+I GC+ GH +A+
Sbjct: 413 KNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALD 472
Query: 425 LFEKMLEDGVRPCYVAFMAVLTACSHA--------------------------------- 451
++M+++GV P + + L AC+++
Sbjct: 473 FLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYA 532
Query: 452 --GLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM---GIQPTG 506
G V E ++ F+SM + L + A+ R G EA + M G +
Sbjct: 533 KCGFVSEAFRVFDSMPE-----KNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDD 587
Query: 507 SVWSTLLAACRAHKSVELAEKV 528
+++T+L+ C +EL E V
Sbjct: 588 YIFATILSTC---GDIELDEAV 606
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 157/304 (51%), Gaps = 24/304 (7%)
Query: 145 DLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSW 204
D++ +LM+MY K EI RKVFD M R+ V+W
Sbjct: 318 DVFVGTSLMDMYAKCG------------------------EISDCRKVFDGMSNRNTVTW 353
Query: 205 NTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIR 264
++IA +A+ G EA+ + R M L ++ T+ SIL ++ G E+H I+
Sbjct: 354 TSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIK 413
Query: 265 HGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGF 324
+ + +V+IGS+L+ +Y KC + LP RD +SW ++I+GC G + + F
Sbjct: 414 NSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDF 473
Query: 325 FRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAK 384
++M++ V+P ++SS + ACA+ +L +G+ +H + N F+ S+L+ MYAK
Sbjct: 474 LKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAK 533
Query: 385 CGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAV 444
CG + A +FD + +++V+W A+IMG A +G +A+ L +M +G F +
Sbjct: 534 CGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATI 593
Query: 445 LTAC 448
L+ C
Sbjct: 594 LSTC 597
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 179/373 (47%), Gaps = 35/373 (9%)
Query: 190 RKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLK-PDSFTLSSILPIFAE 248
RKVFD MP ++ V+W +I G + G+ EA + + ++ + +L + +
Sbjct: 137 RKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSR 196
Query: 249 HVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSI 308
+ G ++HG ++ G G++ + SSL+ YA+C + +LRAF ++ +D ISW ++
Sbjct: 197 RAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAV 255
Query: 309 IAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGF 368
I+ C + G + IG F ML P + + S++ AC+ AL G+Q+H +++
Sbjct: 256 ISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMI 315
Query: 369 DDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEK 428
+ F+ +SL+DMYAKCG I R +FD + R+ V WT+II A G +A+SLF
Sbjct: 316 KTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRI 375
Query: 429 MLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYF-----NSMEKDFRIAPGL--------- 474
M + + +++L AC G + G + NS+EK+ I L
Sbjct: 376 MKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGE 435
Query: 475 --EHYAAVADLLGR--------------AGRLEEAYDFISNM---GIQPTGSVWSTLLAA 515
+ + + L R G EA DF+ M G++P +S+ L A
Sbjct: 436 SRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKA 495
Query: 516 CRAHKSVELAEKV 528
C +S+ + +
Sbjct: 496 CANSESLLIGRSI 508
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 92/213 (43%), Gaps = 17/213 (7%)
Query: 314 QNGKFDQGIGFFR-----QMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGF 368
+ FD G F+ Q + +V ++ + + L K++H ++
Sbjct: 54 KRASFDSGFSGFKGENVNQDDSSSFDSERVDYALLAEWLQSSNGMRLIKRIHAMALKCFD 113
Query: 369 DDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEK 428
D + ++L+ + G++ AR +FD + ++ V WTA+I G +G +A +LFE
Sbjct: 114 DQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFED 173
Query: 429 MLEDGVR-PCYVAFMAVLTACSHAGLVDEGWKYFNSMEK----DFRIAPGLEHYAAVADL 483
++ G+R F+ +L CS + G + +M K + + L ++ A
Sbjct: 174 YVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGE 233
Query: 484 LGRAGRLEEAYDFISNMGIQPTGSVWSTLLAAC 516
L A R A+D + + W+ +++AC
Sbjct: 234 LTSALR---AFDMMEEKDVIS----WTAVISAC 259
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 176/365 (48%), Gaps = 19/365 (5%)
Query: 347 CAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAW 406
C + AL + +H CI L D + ++++MY+ C + A +F+++ R+ W
Sbjct: 122 CGEVEALEEARVVHDCITPL--DARSY--HTVIEMYSGCRSTDDALNVFNEMPKRNSETW 177
Query: 407 TAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEK 466
+I A +G A+ +F + +E+G +P F AV AC G ++EG +F SM +
Sbjct: 178 GTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYR 237
Query: 467 DFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAE 526
D+ + +E Y V ++L G L+EA DF+ M ++P+ +W TL+ C +EL +
Sbjct: 238 DYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGD 297
Query: 527 KVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWI--EIGN 584
+ + I +D M SN A + D+A + LK+ C I +
Sbjct: 298 RFAELIKKLDASRMSKE---SNAGLVAAKASDSAM-------EKLKELRYCQMIRDDPKK 347
Query: 585 KVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSER 644
++H F AGD SH +L + QM G+V T V++E K + L S +
Sbjct: 348 RMHEFRAGDTSHLGTVSAFRSLKV---QMLDIGFVPATRVCFVTVEEEEKEEQLLFRSNK 404
Query: 645 LAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCS 704
LA A V++N+R C+D H K IS I GR ++ RD ++H + NG CS
Sbjct: 405 LAFAHAIINSEARRPLTVLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCS 464
Query: 705 CGDYW 709
C DYW
Sbjct: 465 CKDYW 469
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 276 SLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKP 335
++I+MY+ C + +L F +P R++ +W ++I +NG+ ++ I F + ++ KP
Sbjct: 148 TVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKP 207
Query: 336 MQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIAS-----SLVDMYAKCGNIKM 390
+ F +V AC + +N G LH + D + S ++++M A CG++
Sbjct: 208 DKEIFKAVFFACVSIGDINEG-LLH---FESMYRDYGMVLSMEDYVNVIEMLAACGHLDE 263
Query: 391 ARYIFDKIETRDMVA-WTAIIMGCAMHGH 418
A +++ V W ++ C + G+
Sbjct: 264 ALDFVERMTVEPSVEMWETLMNLCWVQGY 292
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 179/346 (51%), Gaps = 33/346 (9%)
Query: 192 VFDLMPARDVVSWNTVIAGNAQNGMFREALDM-VREMGDDKLKPDSFTLSSILPIFAEHV 250
VF+ + + +WN +I + N REAL + + M + + D FT ++
Sbjct: 74 VFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASS 133
Query: 251 DVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIA 310
+ G ++HG AI+ GF DVF ++L+D+Y KC + + + F +P R +SW +++
Sbjct: 134 SIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLY 193
Query: 311 GCVQNGKFD-------------------------------QGIGFFRQMLKAKVKPMQVS 339
G V N + D + FR+M VKP + +
Sbjct: 194 GLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFT 253
Query: 340 FSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIE 399
+++ A L +L++G+ +H + GF + F+ ++L+DMY+KCG+++ AR +FD ++
Sbjct: 254 IVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQ 313
Query: 400 TRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDG-VRPCYVAFMAVLTACSHAGLVDEGW 458
+ + W ++I +HG +A+SLFE+M E+ V P + F+ VL+AC++ G V +G
Sbjct: 314 GKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGL 373
Query: 459 KYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQP 504
+YF M + + I+P EH A + LL +A +E+A + + +M P
Sbjct: 374 RYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDP 419
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 121/247 (48%), Gaps = 14/247 (5%)
Query: 114 FPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGFGSANKVFD 173
FP ++KA G D++ N LM++Y K G S KVFD
Sbjct: 122 FPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKC---GKPDSGRKVFD 178
Query: 174 ENPQR----------GKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDM 223
+ P R G ++DS VF+ MP R+VVSW +I +N EA +
Sbjct: 179 KMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQL 238
Query: 224 VREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAK 283
R M D +KP+ FT+ ++L + + G +H YA ++GF D F+G++LIDMY+K
Sbjct: 239 FRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSK 298
Query: 284 CNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFF-RQMLKAKVKPMQVSFSS 342
C ++ + + F ++ + +WNS+I +G ++ + F +A V+P ++F
Sbjct: 299 CGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVG 358
Query: 343 VIPACAH 349
V+ ACA+
Sbjct: 359 VLSACAN 365
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 5/212 (2%)
Query: 257 EIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNG 316
+IH I+H D + LI + + +++ F L +WN +I N
Sbjct: 38 QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNH 97
Query: 317 KFDQGIGFF-RQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIA 375
K + + F M+ + + + +F VI AC +++ LG Q+HG I+ GF ++ F
Sbjct: 98 KPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQ 157
Query: 376 SSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVR 435
++L+D+Y KCG R +FDK+ R +V+WT ++ G + A +F +M V
Sbjct: 158 NTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNV- 216
Query: 436 PCYVAFMAVLTACSHAGLVDEGWKYFNSMEKD 467
V++ A++TA DE ++ F M+ D
Sbjct: 217 ---VSWTAMITAYVKNRRPDEAFQLFRRMQVD 245
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 201/453 (44%), Gaps = 88/453 (19%)
Query: 106 GISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLGGF 165
GI P FP ++K++ G D Y N +M+MY K +++
Sbjct: 101 GIMPDAFSFPVVIKSA-----GRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVE-- 153
Query: 166 GSANKVFDENPQRG------------------KGCKC----------------------- 184
SA KVFD+ QR + CK
Sbjct: 154 -SARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVK 212
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP 244
++++ RK FD MP + VVSWN +++G AQNG +AL + +M ++P+ T ++
Sbjct: 213 DLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVIS 272
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLL------- 297
+ D + + F+ ++L+DM+AKC ++ + R F L
Sbjct: 273 ACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLV 332
Query: 298 -------------------------PYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLK-A 331
P R+ +SWNS+IAG NG+ I FF M+
Sbjct: 333 TWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYG 392
Query: 332 KVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMA 391
KP +V+ SV+ AC H+ L LG + I + N SL+ MYA+ GN+ A
Sbjct: 393 DSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEA 452
Query: 392 RYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHA 451
+ +FD+++ RD+V++ + A +G ++ ++L KM ++G+ P V + +VLTAC+ A
Sbjct: 453 KRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRA 512
Query: 452 GLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLL 484
GL+ EG + F S+ P +HYA + DLL
Sbjct: 513 GLLKEGQRIFKSIRN-----PLADHYACM-DLL 539
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 17/212 (8%)
Query: 324 FFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYA 383
+ Q + + P SF VI + G + +LGF + ++ + ++DMY
Sbjct: 93 LYEQRSRCGIMPDAFSFPVVIKSAGRF-----GILFQALVEKLGFFKDPYVRNVIMDMYV 147
Query: 384 KCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMA 443
K +++ AR +FD+I R W +I G G+ +A LF+ M E+ V V++
Sbjct: 148 KHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDV----VSWTV 203
Query: 444 VLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM--- 500
++T + ++ KYF+ M + + + A+ + G E+A ++M
Sbjct: 204 MITGFAKVKDLENARKYFDRMPE-----KSVVSWNAMLSGYAQNGFTEDALRLFNDMLRL 258
Query: 501 GIQPTGSVWSTLLAACRAHKSVELAEKVVDKI 532
G++P + W +++AC L +V I
Sbjct: 259 GVRPNETTWVIVISACSFRADPSLTRSLVKLI 290
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 175/368 (47%), Gaps = 26/368 (7%)
Query: 347 CAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAW 406
C AL + +H CII L + +++++MY+ C ++ A +F+ +M W
Sbjct: 129 CGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFE-----EMPEW 183
Query: 407 TA----IIMGCAMH-GHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYF 461
+ ++M C ++ G+ +A+ LF + E+G +P F V + C+ G V EG F
Sbjct: 184 NSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQF 243
Query: 462 NSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKS 521
+M +++ I P +EHY +V +L +G L+EA +F+ M ++P+ VW TL+ R H
Sbjct: 244 QAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGD 303
Query: 522 VELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIE 581
VEL ++ + + +D + +S+ A + D K RS+ +
Sbjct: 304 VELGDRCAELVEKLDATRLDK---VSSAGLVATKASDFVKKEPSTRSEPYFYS------- 353
Query: 582 IGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTH 641
TF D SHP + I E L L Q+++ GYV DT + ++ + +
Sbjct: 354 ------TFRPVDSSHPQMNIIYETLMSLRSQLKEMGYVPDTRYYRSLIMAMENKEQIFGY 407
Query: 642 SERLAIAFXXXXXXXXXXXRVIKNIRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNG 701
E +A+ ++ NIR+ DCH +K +S I GR+++ RD +H F NG
Sbjct: 408 REEIAVVESLLKSKPRSAITLLTNIRIVGDCHDMMKLMSVITGRDMIKRDAKIYHLFKNG 467
Query: 702 SCSCGDYW 709
C C + W
Sbjct: 468 VCRCNNLW 475
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 69/104 (66%)
Query: 606 LNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERLAIAFXXXXXXXXXXXRVIKN 665
L L +++ GYV +T VLHD+D+E K L HSERLAIAF RV+KN
Sbjct: 136 LKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRVMKN 195
Query: 666 IRVCVDCHTAIKFISKIVGREIVVRDNSRFHHFMNGSCSCGDYW 709
+R+C DCH IK +S I REI+VRDN RFHHF +G+CSCGDYW
Sbjct: 196 LRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 166/386 (43%), Gaps = 59/386 (15%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G ++Y N LMN +CK G A KVFDE +R L P
Sbjct: 235 GFPLNVYVFNILMNKFCKE---GNISDAQKVFDEITKRS---------------LQPT-- 274
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
VVS+NT+I G + G E + +M + +PD FT S++ I+
Sbjct: 275 VVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSAL---------------INA 319
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQ 320
+ DG L D C R L+P + + + ++I G +NG+ D
Sbjct: 320 LCKENKMDG----AHGLFD--EMCKR--------GLIP--NDVIFTTLIHGHSRNGEIDL 363
Query: 321 GIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVD 380
+++ML ++P V +++++ L + + +IR G +K ++L+D
Sbjct: 364 MKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLID 423
Query: 381 MYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRP 436
+ + G+++ A I +++ D V ++A++ G G +DA +ML G++P
Sbjct: 424 GFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKP 483
Query: 437 CYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEA--- 493
V + ++ A G G+K M+ D + P + Y + + L + G+++ A
Sbjct: 484 DDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV-PSVVTYNVLLNGLCKLGQMKNADML 542
Query: 494 YDFISNMGIQPTGSVWSTLLAACRAH 519
D + N+G+ P ++TLL H
Sbjct: 543 LDAMLNIGVVPDDITYNTLLEGHHRH 568
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 146/363 (40%), Gaps = 62/363 (17%)
Query: 150 NALMNMYCKVQNLG-GFGSANK---------VFDENPQRGKGCK-CEIDSVRKVFDLMPA 198
N L+N YCKV NL GF ++ VF + CK ++D +FD M
Sbjct: 279 NTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCK 338
Query: 199 RDVVS----WNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVK 254
R ++ + T+I G+++NG + ++M L+PD ++++ F ++ D+V
Sbjct: 339 RGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVA 398
Query: 255 GMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNSIIA 310
I IR G D ++LID + + VE +L + D + +++++
Sbjct: 399 ARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVC 458
Query: 311 GCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDD 370
G + G+ R+ML+A +KP V++
Sbjct: 459 GMCKEGRVIDAERALREMLRAGIKPDDVTY------------------------------ 488
Query: 371 NKFIASSLVDMYAKCGNIKMARYIFDKIET----RDMVAWTAIIMGCAMHGHALDAVSLF 426
+ ++D + K G+ + + ++++ +V + ++ G G +A L
Sbjct: 489 -----TMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLL 543
Query: 427 EKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGR 486
+ ML GV P + + +L H + +Y E I L Y ++ + L R
Sbjct: 544 DAMLNIGVVPDDITYNTLLEG--HHRHANSSKRYIQKPE--IGIVADLASYKSIVNELDR 599
Query: 487 AGR 489
A +
Sbjct: 600 ASK 602
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 119/272 (43%), Gaps = 26/272 (9%)
Query: 145 DLYTANALMNMYCKVQNLGGFGSANKVFDENPQRG--------------KGCKCEIDSVR 190
D++T +AL+N CK + G A+ +FDE +RG EID ++
Sbjct: 309 DVFTYSALINALCKENKMDG---AHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMK 365
Query: 191 KVFDLMPAR----DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIF 246
+ + M ++ D+V +NT++ G +NG A ++V M L+PD T ++++ F
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGF 425
Query: 247 AEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRV---EHSLRAFYLLPYR-DA 302
DV +EI ++G + D S+L+ K RV E +LR + D
Sbjct: 426 CRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDD 485
Query: 303 ISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGC 362
+++ ++ + G G ++M P V+++ ++ L + L
Sbjct: 486 VTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDA 545
Query: 363 IIRLGFDDNKFIASSLVDMYAKCGNIKMARYI 394
++ +G + ++L++ + + N RYI
Sbjct: 546 MLNIGVVPDDITYNTLLEGHHRHAN-SSKRYI 576
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 177/395 (44%), Gaps = 46/395 (11%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G + +++T N L+ CK + G A K+ E KGC D
Sbjct: 176 GFEPNVFTYNVLLKALCKNNKVDG---AKKLLVE--MSNKGC---------------CPD 215
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
VS+ TVI+ + G+ +E RE+ + + +P ++++ + D E+
Sbjct: 216 AVSYTTVISSMCEVGLVKEG----RELAE-RFEPVVSVYNALINGLCKEHDYKGAFELMR 270
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCVQNG 316
+ G +V S+LI++ ++E + + R + + +S++ GC G
Sbjct: 271 EMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRG 330
Query: 317 KFDQGIGFFRQMLKA-KVKPMQVSFSSVIPA-CAH---LTALNLGKQLHGCIIRLGFDDN 371
+ + QM++ ++P V++++++ C+H + A+++ + +G N
Sbjct: 331 TTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHME----EIGCSPN 386
Query: 372 KFIASSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFE 427
SL++ +AK G++ A YI++K+ T ++V +T ++ H +A SL E
Sbjct: 387 IRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIE 446
Query: 428 KMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRA 487
M ++ P F A + AG +D K F ME+ R P + Y + D L +A
Sbjct: 447 IMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKA 506
Query: 488 GRLEEAYDFISNM---GIQPTGSVWSTLL-AACRA 518
R+EEAY + G++ + S ++TLL +C A
Sbjct: 507 NRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNA 541
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 162/370 (43%), Gaps = 25/370 (6%)
Query: 206 TVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRH 265
+VI+ Q G+ A++M + + P + +L + ++ R
Sbjct: 116 SVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRD 175
Query: 266 GFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCVQNGKFDQG 321
GF+ +VF + L+ K N+V+ + + + + DA+S+ ++I+ + G +G
Sbjct: 176 GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG 235
Query: 322 IGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDM 381
+ L + +P+ ++++I +L ++ G N S+L+++
Sbjct: 236 -----RELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINV 290
Query: 382 YAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFEKMLED-GVRP 436
G I++A ++ R ++ ++++ GC + G DA+ L+ +M+ G++P
Sbjct: 291 LCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQP 350
Query: 437 CYVAFMAVLTA-CSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYD 495
VA+ ++ CSH +V + F+ ME + +P + Y ++ + + G L+ A
Sbjct: 351 NVVAYNTLVQGFCSHGNIV-KAVSVFSHME-EIGCSPNIRTYGSLINGFAKRGSLDGAVY 408
Query: 496 FISNM---GIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSA 552
+ M G P V++ ++ A H + AE +++ ++ EN V N +
Sbjct: 409 IWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIE---IMSKENCAPSVPTFNAF-- 463
Query: 553 AKRWKDAAKL 562
K DA +L
Sbjct: 464 IKGLCDAGRL 473
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 124/258 (48%), Gaps = 8/258 (3%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREA----LDMVREMGDDKLKPDSFTLSS 241
+D R++FD MP RD SW V G + G + +A + M++ K S+ L
Sbjct: 139 LDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGC 198
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGF--DGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPY 299
+L A D G ++H + GF + D ++ SLI Y + +E + + L
Sbjct: 199 VLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSN 258
Query: 300 RDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLT-ALNLGKQ 358
+ ++W + + + G+F + I F +M +K FS+V+ AC+ ++ G+Q
Sbjct: 259 ANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQ 318
Query: 359 LHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVA-WTAIIMGCAMHG 417
+H I+LGF+ + I L++MY K G +K A +F + V+ W A++ +G
Sbjct: 319 VHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNG 378
Query: 418 HALDAVSLFEKMLEDGVR 435
++A+ L +M G++
Sbjct: 379 IYIEAIKLLYQMKATGIK 396
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 135/305 (44%), Gaps = 16/305 (5%)
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMY 281
D++R M L + S + A D E+ + ++ + + L+ M+
Sbjct: 74 DILRLMDSLSLPGNEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMH 133
Query: 282 AKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVK-----PM 336
C R++ + + F +P+RD SW + GC++ G ++ F MLK K P
Sbjct: 134 VSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPS 193
Query: 337 QVSFSSVIPACAHLTALNLGKQLHGCIIRLGF--DDNKFIASSLVDMYAKCGNIKMARYI 394
+ V+ ACA + LGKQ+H +LGF +++ +++ SL+ Y + ++ A +
Sbjct: 194 WI-LGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLV 252
Query: 395 FDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLV 454
++ + VAW A + G + + F +M G++ F VL ACS V
Sbjct: 253 LHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACS---WV 309
Query: 455 DEGWKYFNSMEKDFRIAPGLEHYAAV----ADLLGRAGRLEEAYDFISNMGIQPTGSVWS 510
+G + + + I G E + ++ G+ G++++A + + + S W+
Sbjct: 310 SDGGRSGQQVHAN-AIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWN 368
Query: 511 TLLAA 515
++A+
Sbjct: 369 AMVAS 373
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/486 (19%), Positives = 214/486 (44%), Gaps = 41/486 (8%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M++ GI+P + + +L+ G +D T NAL+++Y K
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
A KV +E G P+ +V++N++I+ A++GM EA+
Sbjct: 330 PK---EAMKVLNEMVLNG---------------FSPS--IVTYNSLISAYARDGMLDEAM 369
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMY 281
++ +M + KPD FT +++L F V M I G ++ ++ I MY
Sbjct: 370 ELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMY 429
Query: 282 AKCNRVEHSLRAF------YLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKP 335
+ ++ F L P D ++WN+++A QNG + G F++M +A P
Sbjct: 430 GNRGKFTEMMKIFDEINVCGLSP--DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 487
Query: 336 MQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIF 395
+ +F+++I A + + ++ ++ G + ++++ A+ G + + +
Sbjct: 488 ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL 547
Query: 396 DKIE----TRDMVAWTAIIMGCAMHGHALDAV-SLFEKMLEDGVRPCYVAFMAVLTACSH 450
++E + + + +++ A +G + + SL E++ + P V ++ CS
Sbjct: 548 AEMEDGRCKPNELTYCSLLHAYA-NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSK 606
Query: 451 AGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEA---YDFISNMGIQPTGS 507
L+ E + F+ + K+ +P + ++ + GR + +A D++ G P+ +
Sbjct: 607 CDLLPEAERAFSEL-KERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMA 665
Query: 508 VWSTLLAACRAHKSVELAEKVVDKILL--VDPENMGAYVLMSNIYSAAKRWKDAAKLRIH 565
+++L+ +E+++ +IL + P+ + +Y + Y R +DA+++
Sbjct: 666 TYNSLMYMHSRSADFGKSEEILREILAKGIKPDII-SYNTVIYAYCRNTRMRDASRIFSE 724
Query: 566 MRSKGL 571
MR+ G+
Sbjct: 725 MRNSGI 730
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/380 (20%), Positives = 155/380 (40%), Gaps = 48/380 (12%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEH-------VDV 252
DV S+ ++I+ A +G +REA+++ ++M +D KP T + IL +F + +
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 253 VKGMEIHGYAI-----------------------------RHGFDGDVFIGSSLIDMYAK 283
V+ M+ G A GF D ++L+D+Y K
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 284 CNRVEHSLRAFYLLPYR----DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVS 339
+R + +++ + +++NS+I+ ++G D+ + QM + KP +
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 340 FSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIE 399
+++++ + + + G N ++ + MY G IFD+I
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 400 ----TRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVD 455
+ D+V W ++ +G + +F++M G P F +++A S G +
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506
Query: 456 EGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNMG---IQPTGSVWSTL 512
+ + M D + P L Y V L R G E++ ++ M +P + +L
Sbjct: 507 QAMTVYRRM-LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 565
Query: 513 LAACRAHKSVELAEKVVDKI 532
L A K + L + +++
Sbjct: 566 LHAYANGKEIGLMHSLAEEV 585
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 113/261 (43%), Gaps = 13/261 (4%)
Query: 266 GFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPY----RDAISWNSIIAGCVQNG-KFDQ 320
GF DV+ +SLI +A R ++ F + I++N I+ + G +++
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 321 GIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVD 380
+M + P +++++I C + Q+ + GF +K ++L+D
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 381 MYAKCGNIKMARYIFDKIE----TRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRP 436
+Y K K A + +++ + +V + ++I A G +A+ L +M E G +P
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 437 CYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEA--- 493
+ +L+ AG V+ F M ++ P + + A + G G+ E
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEM-RNAGCKPNICTFNAFIKMYGNRGKFTEMMKI 441
Query: 494 YDFISNMGIQPTGSVWSTLLA 514
+D I+ G+ P W+TLLA
Sbjct: 442 FDEINVCGLSPDIVTWNTLLA 462
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 187/425 (44%), Gaps = 42/425 (9%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCK-------------CEID 187
GLD D +T +L+ YC+ ++L SA KVF+E P KGC+ C
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDL---DSAFKVFNEMPL--KGCRRNEVAYTHLIHGLCVAR 302
Query: 188 SVRKVFDL-MPARD------VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLS 240
+ + DL + +D V ++ +I + EAL++V+EM + +KP+ T +
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 241 SILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR 300
++ K E+ G + G +V ++LI+ Y K +E ++ L+ R
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 301 ----DAISWNSIIAG-CVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNL 355
+ ++N +I G C N + +G +ML+ KV P V+++S+I +
Sbjct: 423 KLSPNTRTYNELIKGYCKSN--VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480
Query: 356 GKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIM 411
+L + G +++ +S++D K ++ A +FD +E + ++V +TA+I
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Query: 412 GCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIA 471
G G +A + EKML P + F A++ G + E M K +
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK-IGLQ 599
Query: 472 PGLEHYAAVADLLGRAGRLEEAYDFISNM---GIQPTGSVWSTLLAA-CRAHKSVELAEK 527
P + + L + G + AY M G +P ++T + CR + ++ AE
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD-AED 658
Query: 528 VVDKI 532
++ K+
Sbjct: 659 MMAKM 663
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 108/509 (21%), Positives = 205/509 (40%), Gaps = 55/509 (10%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M GI P H + L+ + GL ++ T NAL+N YCK
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCK--- 405
Query: 162 LGGFGSANKVFDENPQRG------------KG-CKCEIDSVRKVFDLMPAR----DVVSW 204
G A V + R KG CK + V + M R DVV++
Sbjct: 406 RGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTY 465
Query: 205 NTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIR 264
N++I G ++G F A ++ M D L PD +T +S++ + V + ++ +
Sbjct: 466 NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525
Query: 265 HGFDGDVFIGSSLIDMYAKCNRVEHS------LRAFYLLPYRDAISWNSIIAGCVQNGKF 318
G + +V + ++LID Y K +V+ + + + LP +++++N++I G +GK
Sbjct: 526 KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLP--NSLTFNALIHGLCADGKL 583
Query: 319 DQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSL 378
+ +M+K ++P + + +I + ++ G + ++
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643
Query: 379 VDMYAKCGNIKMARYIFDKIE----TRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGV 434
+ Y + G + A + K+ + D+ ++++I G G A + ++M + G
Sbjct: 644 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGC 703
Query: 435 RPCYVAFMAVLTAC------SHAGLVDEGWKYFNSMEKD-----------FRIAPGLEHY 477
P F++++ G E N ME D + P + Y
Sbjct: 704 EPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSY 763
Query: 478 AAVADLLGRAGRL---EEAYDFIS-NMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKIL 533
+ + G L E+ +D + N GI P+ V++ LL+ C K A KVVD ++
Sbjct: 764 EKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMI 823
Query: 534 LVD--PENMGAYVLMSNIYSAAKRWKDAA 560
V P+ VL+ +Y ++ + +
Sbjct: 824 CVGHLPQLESCKVLICGLYKKGEKERGTS 852
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/458 (21%), Positives = 196/458 (42%), Gaps = 62/458 (13%)
Query: 193 FDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDV 252
F+L + +NT++ A+ G+ E + EM +DK+ P+ +T + ++ + + +V
Sbjct: 175 FELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNV 234
Query: 253 VKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPY----RDAISWNSI 308
+ + + G D D F +SLI Y + ++ + + F +P R+ +++ +
Sbjct: 235 EEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHL 294
Query: 309 IAGCVQNGKFDQGIGFF-----------------------------------RQMLKAKV 333
I G + D+ + F ++M + +
Sbjct: 295 IHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGI 354
Query: 334 KPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARY 393
KP +++ +I + ++L G ++ G N ++L++ Y K G I+ A
Sbjct: 355 KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVD 414
Query: 394 IFDKIETRDMV----AWTAIIMG-CAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTAC 448
+ + +E+R + + +I G C + H A+ + KMLE V P V + +++
Sbjct: 415 VVELMESRKLSPNTRTYNELIKGYCKSNVHK--AMGVLNKMLERKVLPDVVTYNSLIDGQ 472
Query: 449 SHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEA---YDFISNMGIQPT 505
+G D ++ S+ D + P Y ++ D L ++ R+EEA +D + G+ P
Sbjct: 473 CRSGNFDSAYRLL-SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPN 531
Query: 506 GSVWSTLL-AACRAHKSVE---LAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAK 561
+++ L+ C+A K E + EK++ K L P ++ L+ + A + K+A
Sbjct: 532 VVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL--PNSLTFNALIHGL-CADGKLKEATL 588
Query: 562 LRIHMRSKGLKKTPACSWIEIGNKVHTFLA-GDKSHPY 598
L M GL+ T + I I H L GD H Y
Sbjct: 589 LEEKMVKIGLQPTVSTDTILI----HRLLKDGDFDHAY 622
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 181/407 (44%), Gaps = 30/407 (7%)
Query: 142 LDFDLYTANALMNMYCKVQNL----GGFGSANKVFDENPQ------------RGKGCKCE 185
+ +DLY+ N L+N +C+ L G K+ E P GK
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYE-PDIVTLSSLLNGYCHGKRISEA 169
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
+ V ++F + + V++NT+I G + EA+ ++ M +PD FT +++
Sbjct: 170 VALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG 229
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----D 301
+ D+ + + + + DV I +++ID V +L F + + +
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
+++NS+I G++ M++ K+ P V+FS++I A L ++L+
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRD----MVAWTAIIMGCAMHG 417
+I+ D + F SSL++ + + A+++F+ + ++D +V + +I G
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 418 HALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHY 477
+ + LF +M + G+ V + ++ AG D K F M D + P + Y
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPPDIITY 468
Query: 478 AAVADLLGRAGRLEEA---YDFISNMGIQPTGSVWSTLLAA-CRAHK 520
+ + D L + G+LE+A ++++ ++P ++ ++ C+A K
Sbjct: 469 SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 136/276 (49%), Gaps = 8/276 (2%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
+VV++N++I G + +A ++ +M + K+ P+ T S+++ F + +V+ +++
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD----AISWNSIIAGCVQN 315
I+ D D+F SSLI+ + +R++ + F L+ +D +++N++I G +
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 316 GKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIA 375
+ ++G+ FR+M + + V+++++I ++ +++ ++ G +
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468
Query: 376 SSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFEKMLE 431
S L+D K G ++ A +F+ ++ D+ + +I G G D LF +
Sbjct: 469 SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 528
Query: 432 DGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKD 467
GV+P + + +++ GL +E F M++D
Sbjct: 529 KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/423 (18%), Positives = 181/423 (42%), Gaps = 52/423 (12%)
Query: 165 FGSANKVFDENPQRGKGCKCEIDSVRKVFDLM----PARDVVSWNTVIAGNAQNGMFREA 220
F +A+ + E R ++D +F M P +V +N +++ A+ F
Sbjct: 40 FSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLV 99
Query: 221 LDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDM 280
+ + M + ++ D ++ + ++ F + + + G ++ G++ D+ SSL++
Sbjct: 100 ISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNG 159
Query: 281 YAKCNRVEHSLR---AFYLLPYR-DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPM 336
Y R+ ++ +++ Y+ + +++N++I G + K + + +M+ +P
Sbjct: 160 YCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQP- 218
Query: 337 QVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFD 396
+ F ++V+ K G+I +A +
Sbjct: 219 ----------------------------------DLFTYGTVVNGLCKRGDIDLALSLLK 244
Query: 397 KIE----TRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAG 452
K+E D+V +T II + + DA++LF +M G+RP V + +++ + G
Sbjct: 245 KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 304
Query: 453 LVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEA---YDFISNMGIQPTGSVW 509
+ + + M + +I P + ++A+ D + G+L EA YD + I P +
Sbjct: 305 RWSDASRLLSDM-IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 510 STLLAACRAHKSVELAEKVVDKILLVDP-ENMGAYVLMSNIYSAAKRWKDAAKLRIHMRS 568
S+L+ H ++ A+ + + ++ D N+ Y + + AKR ++ +L M
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423
Query: 569 KGL 571
+GL
Sbjct: 424 RGL 426
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 90/206 (43%), Gaps = 24/206 (11%)
Query: 145 DLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSW 204
++ T N L+ +CK + + ++F E QRG + V++
Sbjct: 394 NVVTYNTLIKGFCKAKRVE---EGMELFREMSQRG-----------------LVGNTVTY 433
Query: 205 NTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIR 264
NT+I G Q G A + ++M D + PD T S +L ++ + K + + Y +
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Query: 265 HGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCVQNGKFDQ 320
+ D++ + +I+ K +VE F L + + I + ++I+G + G ++
Sbjct: 494 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Query: 321 GIGFFRQMLKAKVKPMQVSFSSVIPA 346
FR+M + P +++++I A
Sbjct: 554 ADALFREMKEDGTLPNSGTYNTLIRA 579
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 159/379 (41%), Gaps = 24/379 (6%)
Query: 141 GLDFDLYTANALMNMYCKVQNLG-GFGSANKVFDENPQ----------RGKGCKCEIDSV 189
G+ +YT + ++N +C+ + L F + K+ + G +C +
Sbjct: 118 GIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEA 177
Query: 190 RKVFDLMPAR----DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
++ D M +++ NT++ G NG +A+ ++ M + +P+ T +L +
Sbjct: 178 LELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNV 237
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----D 301
+ ME+ D S +ID K ++++ F + + D
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 297
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
I++N++I G G++D G R M+K K+ P V+FS +I + L QL
Sbjct: 298 IITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLK 357
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHG 417
+++ G N +SL+D + K ++ A + D + ++ D++ + +I G
Sbjct: 358 EMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKAN 417
Query: 418 HALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHY 477
D + LF +M GV V + ++ +G ++ K F M R+ P + Y
Sbjct: 418 RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR-RVRPDIVSY 476
Query: 478 AAVADLLGRAGRLEEAYDF 496
+ D L G LE+A +
Sbjct: 477 KILLDGLCDNGELEKALEI 495
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/433 (20%), Positives = 175/433 (40%), Gaps = 53/433 (12%)
Query: 155 MYCKVQNLGGFGSANKVFDENPQRG-KGCKCE--IDSVRKVFDLMPARDVVSWNTVIAGN 211
++C + F N + + G G K + +D R + P V+ +N + +
Sbjct: 39 LFCCERGFSTFSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAI 98
Query: 212 AQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDV 271
A+ + L + ++M + +TLS ++ F + G ++ G++ D
Sbjct: 99 AKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDT 158
Query: 272 FIGSSLIDMYAKCNRVEHSL----RAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQ 327
I ++L++ RV +L R + I+ N+++ G NGK + +
Sbjct: 159 VIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDR 218
Query: 328 MLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGN 387
M++ +P +V++ V+ ++ K G
Sbjct: 219 MVETGFQPNEVTYGPVL-----------------------------------NVMCKSGQ 243
Query: 388 IKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMA 443
+A + K+E R D V ++ II G G +A +LF +M G + + +
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 444 VLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM--- 500
++ +AG D+G K M K +I+P + ++ + D + G+L EA + M
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKR-KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362
Query: 501 GIQPTGSVWSTLLAACRAHKSVELAEKVVDKILL--VDPENMGAYVLMSNIYSAAKRWKD 558
GI P +++L+ +E A ++VD ++ DP+ M +L+ N Y A R D
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI-NGYCKANRIDD 421
Query: 559 AAKLRIHMRSKGL 571
+L M +G+
Sbjct: 422 GLELFREMSLRGV 434
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/497 (20%), Positives = 218/497 (43%), Gaps = 61/497 (12%)
Query: 192 VFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVD 251
V D PA +VV++ T+I G + G A D+ + M ++PD S+++ + +
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 252 VVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNS 307
+ G ++ A+ G DV + SS ID+Y K + + + + + + +++
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 308 IIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLG 367
+I G Q+G+ + G + Q+LK ++P V++SS+I L G L+ +I++G
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 368 FDDNKFIASSLVDMYAKCG---------------NIKMARYIFDKI-------------- 398
+ + I LVD +K G +I++ +F+ +
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 399 ----------ETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTA- 447
D+ +T ++ M G +A+ LF +M + G+ P +A+ ++ A
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF 576
Query: 448 CSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM---GIQP 504
C H G + F+ M+++ +I+ + V LL + R+E+A F +N+ ++P
Sbjct: 577 CKHMKPT-IGLQLFDLMQRN-KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP 634
Query: 505 TGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRI 564
++T++ + + ++ AE++ + +L V P L I+ K +R+
Sbjct: 635 DIVTYNTMICGYCSLRRLDEAERIFE-LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 693
Query: 565 H--MRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINE--------ALNILLEQME 614
M KG K A ++ + + + + S ++++ E + +I+++ +
Sbjct: 694 FSIMAEKG-SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 752
Query: 615 KEGYVLDTSEVLHDVDD 631
K G V + + + H D
Sbjct: 753 KRGRVDEATNIFHQAID 769
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 106/502 (21%), Positives = 198/502 (39%), Gaps = 79/502 (15%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGC-----KCEIDSVRKVFDL 195
G++ DL + L++ Y K G G +K+F + +G ID K DL
Sbjct: 316 GIEPDLIAYSTLIDGYFKA---GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDL 372
Query: 196 MPAR-------------DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSI 242
A +VV++ +I G Q+G EA M ++ ++P T SS+
Sbjct: 373 ATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSL 432
Query: 243 LPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLR-AFYLLPYR- 300
+ F + ++ G ++ I+ G+ DV I L+D +K + H++R + +L
Sbjct: 433 IDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI 492
Query: 301 --DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQ 358
+ + +NS+I G + +FD+ + FR M +KP +F++V+ L
Sbjct: 493 RLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALF 552
Query: 359 LHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGH 418
L + ++G + + +L+D + K + +FD ++ + A A+ C + H
Sbjct: 553 LFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAV---CNVVIH 609
Query: 419 AL-------DAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYF---------- 461
L DA F ++E + P V + ++ +DE + F
Sbjct: 610 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 669
Query: 462 ---------------NSMEKDFRI---------APGLEHYAAVADLLGRAGRLEEAYDFI 497
N M+ R+ P Y + D ++ +E ++
Sbjct: 670 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 729
Query: 498 SNM---GIQPTGSVWSTLLAAC----RAHKSVELAEKVVDKILLVDPENMGAYVLMSNIY 550
M GI P+ +S ++ R ++ + + +D LL D + AY ++ Y
Sbjct: 730 EEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD---VVAYAILIRGY 786
Query: 551 SAAKRWKDAAKLRIHMRSKGLK 572
R +AA L HM G+K
Sbjct: 787 CKVGRLVEAALLYEHMLRNGVK 808
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 144/318 (45%), Gaps = 16/318 (5%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
+VV +N++I G + F EAL + R MG +KPD T ++++ + + + + +
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS-----WNSIIAGCVQ 314
+ G + D +LID + K + L+ F L+ R+ IS N +I +
Sbjct: 555 FRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQ-RNKISADIAVCNVVIHLLFK 613
Query: 315 NGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFI 374
+ + FF +++ K++P V+++++I L L+ +++ + F N
Sbjct: 614 CHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVT 673
Query: 375 ASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAM--HGHALD---AVSLFEKM 429
+ L+ + K ++ A +F I A+ GC M ++D + LFE+M
Sbjct: 674 LTILIHVLCKNNDMDGAIRMF-SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 732
Query: 430 LEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGR 489
E G+ P V++ ++ G VDE F+ D ++ P + YA + + GR
Sbjct: 733 QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ-AIDAKLLPDVVAYAILIRGYCKVGR 791
Query: 490 LEEA---YDFISNMGIQP 504
L EA Y+ + G++P
Sbjct: 792 LVEAALLYEHMLRNGVKP 809
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/468 (21%), Positives = 211/468 (45%), Gaps = 32/468 (6%)
Query: 192 VFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVD 251
V D PA +VV++ T+I G + G A D+ + M ++PD S+++ + +
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 252 VVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNS 307
+ G ++ A+ G DV + SS ID+Y K + + + + + + +++
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 308 IIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLG 367
+I G Q+G+ + G + Q+LK ++P V++SS+I L G L+ +I++G
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 368 FDDNKFIASSLVDMYAKCG----NIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAV 423
+ + I LVD +K G ++ + + + ++V + ++I G +A+
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 424 SLFEKMLEDGVRPCYVAFMAVLTA-------CSHAGLVDEGWKYFNSMEKDFRIAPGLEH 476
+F M G++P F V+ C H G + F+ M+++ +I+ +
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPT-IGLQLFDLMQRN-KISADIAV 574
Query: 477 YAAVADLLGRAGRLEEAYDFISNM---GIQPTGSVWSTLLAACRAHKSVELAEKVVDKIL 533
V LL + R+E+A F +N+ ++P ++T++ + + ++ AE++ + +L
Sbjct: 575 CNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE-LL 633
Query: 534 LVDPENMGAYVLMSNIYSAAKRWKDAAKLRIH--MRSKGLKKTPACSWIEIGNKVHTFLA 591
V P L I+ K +R+ M KG K A ++ + + +
Sbjct: 634 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG-SKPNAVTYGCLMDWFSKSVD 692
Query: 592 GDKSHPYYDKINE--------ALNILLEQMEKEGYVLDTSEVLHDVDD 631
+ S ++++ E + +I+++ + K G V + + + H D
Sbjct: 693 IEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAID 740
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 199/473 (42%), Gaps = 50/473 (10%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGC-----KCEIDSVRKVFDL 195
G++ DL + L++ Y K G G +K+F + +G ID K DL
Sbjct: 316 GIEPDLIAYSTLIDGYFKA---GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDL 372
Query: 196 MPAR-------------DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSI 242
A +VV++ +I G Q+G EA M ++ ++P T SS+
Sbjct: 373 ATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSL 432
Query: 243 LPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLR-AFYLLPYR- 300
+ F + ++ G ++ I+ G+ DV I L+D +K + H++R + +L
Sbjct: 433 IDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI 492
Query: 301 --DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPA-------CAHLT 351
+ + +NS+I G + +FD+ + FR M +KP +F++V+ C H+
Sbjct: 493 RLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMK 552
Query: 352 ALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDK-IETR---DMVAWT 407
+G QL + R + + + ++ + KC I+ A F+ IE + D+V +
Sbjct: 553 P-TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYN 611
Query: 408 AIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSM-EK 466
+I G +A +FE + P V ++ +D + F+ M EK
Sbjct: 612 TMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK 671
Query: 467 DFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM---GIQPTGSVWSTLLAAC----RAH 519
+ P Y + D ++ +E ++ M GI P+ +S ++ R
Sbjct: 672 GSK--PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 729
Query: 520 KSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLK 572
++ + + +D LL D + AY ++ Y R +AA L HM G+K
Sbjct: 730 EATNIFHQAIDAKLLPD---VVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 779
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 128/276 (46%), Gaps = 8/276 (2%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
DVV+++++I G +G + + M+REM + PD T S+++ +F + +++ E++
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 338
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCVQN 315
I G D +SLID + K N + + + F L+ + D ++++ +I +
Sbjct: 339 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398
Query: 316 GKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIA 375
+ D G+ FR++ + P +++++++ LN K+L ++ G +
Sbjct: 399 KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458
Query: 376 SSLVDMYAKCGNIKMARYIFDKIETRDMV----AWTAIIMGCAMHGHALDAVSLFEKMLE 431
L+D G + A IF+K++ M + II G DA SLF + +
Sbjct: 459 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 518
Query: 432 DGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKD 467
GV+P V + ++ G + E F M++D
Sbjct: 519 KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED 554
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 172/371 (46%), Gaps = 25/371 (6%)
Query: 219 EALDMVREMGDDKLKPDSFTLSSILPIFA--EHVDVV----KGMEIHGYAIRHGFDGDVF 272
+A+D+ M + P + + A + D+V KGME++G I H D++
Sbjct: 53 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG--IEH----DMY 106
Query: 273 IGSSLIDMYAKCNRVEHSL----RAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQM 328
+ +I+ Y + ++ + RA+ L D I++++++ G G+ + + +M
Sbjct: 107 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 166
Query: 329 LKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNI 388
++ K +P V+ S++I ++ L ++ GF ++ +++ K GN
Sbjct: 167 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 226
Query: 389 KMARYIFDKIETRDM----VAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAV 444
+A +F K+E R++ V ++ +I G DA+SLF +M G++ V + ++
Sbjct: 227 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 445 LTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM---G 501
+ + G D+G K M I P + ++A+ D+ + G+L EA + + M G
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGR-NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 502 IQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPE-NMGAYVLMSNIYSAAKRWKDAA 560
I P +++L+ + A ++ D ++ E ++ Y ++ N Y AKR D
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405
Query: 561 KLRIHMRSKGL 571
+L + SKGL
Sbjct: 406 RLFREISSKGL 416
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/453 (19%), Positives = 185/453 (40%), Gaps = 62/453 (13%)
Query: 141 GLDFDLYTANALMNMYCKVQNL----GGFGSANKVFDE----------NPQRGKGCKCE- 185
G++ D+YT ++N YC+ + L G A K+ E N +G E
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
+ V ++ ++ D+V+ +T+I G G EAL ++ M + +PD T +L
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----D 301
+ + +++ V S +ID K + +L F + + D
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
++++S+I G +GK+D G R+M+ + P V+FS++I L K+L+
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR-------------------- 401
+I G + +SL+D + K + A +FD + ++
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 399
Query: 402 -------------------DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFM 442
+ + + +++G G A LF++M+ GV P V +
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 459
Query: 443 AVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDF---ISN 499
+L G +++ + F M+K R+ G+ Y + + A ++++A+ +S+
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKS-RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 518
Query: 500 MGIQPTGSVWSTLLAACRAHKSVELAEKVVDKI 532
G++P ++ ++ S+ A+ + K+
Sbjct: 519 KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 155/361 (42%), Gaps = 22/361 (6%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
+D RK+ + VV ++ VI ++G F +AL + EM +K D T SS++
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----D 301
G ++ I DV S+LID++ K ++ + + + R D
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
I++NS+I G + + F M+ +P V++S +I + ++ G +L
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHG 417
I G N ++LV + + G + A+ +F ++ +R +V + ++ G +G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 418 HALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHY 477
A+ +FEKM + + + ++ +A VD+ W F S+ D + P + Y
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLS-DKGVKPDVVTY 528
Query: 478 AAVADLLGRAGRLEEAYDFISNM---GIQPTGSVWSTLLAACRAH-------KSVELAEK 527
+ L + G L EA M G P ++ L+ RAH SVEL E+
Sbjct: 529 NVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI---RAHLGGSGLISSVELIEE 585
Query: 528 V 528
+
Sbjct: 586 M 586
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/292 (19%), Positives = 118/292 (40%), Gaps = 32/292 (10%)
Query: 100 NAMRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKV 159
N M GI+P + SL+ G + D+ T + L+N YCK
Sbjct: 339 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398
Query: 160 QNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFRE 219
+ + ++F E +G L+P + +++NT++ G Q+G
Sbjct: 399 KRV---DDGMRLFREISSKG---------------LIP--NTITYNTLVLGFCQSGKLNA 438
Query: 220 ALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLID 279
A ++ +EM + P T +L ++ ++ K +EI + + I + +I
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 498
Query: 280 MYAKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKP 335
++V+ + F L + D +++N +I G + G + FR+M + P
Sbjct: 499 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 558
Query: 336 MQVSFSSVIPA----CAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYA 383
+++ +I A ++++ L +++ C GF + ++DM +
Sbjct: 559 DDFTYNILIRAHLGGSGLISSVELIEEMKVC----GFSADSSTIKMVIDMLS 606
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 160/346 (46%), Gaps = 23/346 (6%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREA----LDMVREMGDDKLKPDSFTLSS 241
+D+ + +F +P ++V +NT+I G +G +A DMV G + PD T +S
Sbjct: 338 VDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG---IVPDVCTYNS 394
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHS------LRAFY 295
++ + + V +E+ G +V+ + L+D + K +++ + + A
Sbjct: 395 LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG 454
Query: 296 LLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNL 355
L P + + +N +I+ + + + + FR+M + KP +F+S+I + +
Sbjct: 455 LKP--NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKH 512
Query: 356 GKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKI----ETRDMVAWTAIIM 411
L +I G N ++L++ + + G IK AR + +++ D + + ++I
Sbjct: 513 ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIK 572
Query: 412 GCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIA 471
G G A SLFEKML DG P ++ ++ +G+V+E ++ M
Sbjct: 573 GLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS-T 631
Query: 472 PGLEHYAAVADLLGRAGRLEEAYDFISNM---GIQPTGSVWSTLLA 514
P + + ++ + L RAGR+E+ + GI P ++TL++
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 151/337 (44%), Gaps = 45/337 (13%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G+ D+ T N+L+ Y K G G A +V + R KGCK +
Sbjct: 384 GIVPDVCTYNSLIYGYWKE---GLVGLALEVLHD--MRNKGCK---------------PN 423
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
V S+ ++ G + G EA +++ EM D LKP++ + ++ F + + + +EI
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR 483
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAIS---------WNSIIAG 311
R G DV+ +SLI + + ++H+L +LL RD IS +N++I
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHAL---WLL--RDMISEGVVANTVTYNTLINA 538
Query: 312 CVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDN 371
++ G+ + +M+ +++++S+I ++ + L ++R G +
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Query: 372 KFIASSLVDMYAKCGNIKMA----RYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFE 427
+ L++ + G ++ A + + + T D+V + ++I G G D +++F
Sbjct: 599 NISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFR 658
Query: 428 KMLEDGVRPCYVAFMAVLTACSHAG-------LVDEG 457
K+ +G+ P V F +++ G L+DEG
Sbjct: 659 KLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEG 695
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 141/343 (41%), Gaps = 39/343 (11%)
Query: 189 VRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAE 248
+R V+ P S+N V+ + A ++ +M K+ P FT ++ F
Sbjct: 172 MRNVYSCEPT--FKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCA 229
Query: 249 HVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSI 308
++ + + +HG + I +LI +KCNRV +L+ +
Sbjct: 230 VNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM----------F 279
Query: 309 IAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGF 368
+ GCV + + +F+ VI +N ++ ++ GF
Sbjct: 280 LMGCVPDAE---------------------TFNDVILGLCKFDRINEAAKMVNRMLIRGF 318
Query: 369 DDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEK 428
+ L++ K G + A+ +F +I ++V + +I G HG DA ++
Sbjct: 319 APDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSD 378
Query: 429 MLED-GVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRA 487
M+ G+ P + +++ GLV + + M ++ P + Y + D +
Sbjct: 379 MVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM-RNKGCKPNVYSYTILVDGFCKL 437
Query: 488 GRLEEAYDFISNM---GIQPTGSVWSTLLAA-CRAHKSVELAE 526
G+++EAY+ ++ M G++P ++ L++A C+ H+ E E
Sbjct: 438 GKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVE 480
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 175/422 (41%), Gaps = 54/422 (12%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
DV+S++TV+ G + G + ++ M LKP+S+ SI+ + + + E
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCVQN 315
IR G D + ++LID + K + + + FY + R D +++ +II+G Q
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 316 GKFDQGIGFFRQMLKAKVKPMQVSFSSVI-------------------------PACAHL 350
G + F +M ++P V+F+ +I P
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 351 TALNLG----------KQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIE- 399
T L G +L + ++G N F +S+V+ K GNI+ A + + E
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 400 ---TRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDE 456
D V +T ++ G A + ++ML G++P V F ++ G++++
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 457 GWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEA---YDFISNMGIQPTGSVWSTLL 513
G K N M IAP + ++ L+ A Y + + G+ P G + L+
Sbjct: 580 GEKLLNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 514 AA-CRAHKSVE---LAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSK 569
C+A E L +++ K V ++ Y ++ + K++ +A ++ MR +
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSV---SVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Query: 570 GL 571
GL
Sbjct: 696 GL 697
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 188/444 (42%), Gaps = 41/444 (9%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
+V S+N VI Q G +EA ++ M PD + S+++ + ++ K ++
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFY------LLPYRDAISWNSIIAGCV 313
R G + +I S+I + + ++ + AF +LP D + + ++I G
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP--DTVVYTTLIDGFC 362
Query: 314 QNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPA-CAHLTALNLGKQLHGCIIRLGFDDNK 372
+ G FF +M + P ++++++I C + GK H + G + +
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDS 421
Query: 373 FIASSLVDMYAKCGNIKMARYIFDKIE----TRDMVAWTAIIMGCAMHGHALDAVSLFEK 428
+ L++ Y K G++K A + + + + ++V +T +I G G A L +
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 429 MLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLE----HYAAVADLL 484
M + G++P + +++ +G ++E K E A GL Y + D
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE-----AAGLNADTVTYTTLMDAY 536
Query: 485 GRAGRLEEAYDFISNM---GIQPTGSVWSTLLAACRAHKSVELAEKVVDKILL--VDPEN 539
++G +++A + + M G+QPT ++ L+ H +E EK+++ +L + P N
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP-N 595
Query: 540 MGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYY 599
+ + Y K A + M S+G +G T+ K H
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRG-----------VGPDGKTYENLVKGHCKA 644
Query: 600 DKINEALNILLEQMEKEGYVLDTS 623
+ EA L ++M+ +G+ + S
Sbjct: 645 RNMKEAW-FLFQEMKGKGFSVSVS 667
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 130/304 (42%), Gaps = 32/304 (10%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
GL+ D T L+N YCK G A +V + Q GC + +
Sbjct: 416 GLEPDSVTFTELINGYCKA---GHMKDAFRVHNHMIQ--AGC---------------SPN 455
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
VV++ T+I G + G A +++ EM L+P+ FT +SI+ + ++ + +++ G
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFY------LLPYRDAISWNSIIAGCVQ 314
G + D ++L+D Y K ++ + L P +++N ++ G
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP--TIVTFNVLMNGFCL 573
Query: 315 NGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFI 374
+G + G ML + P +F+S++ L ++ + G +
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 375 ASSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFEKML 430
+LV + K N+K A ++F +++ + + ++ +I G L+A +F++M
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Query: 431 EDGV 434
+G+
Sbjct: 694 REGL 697
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 175/422 (41%), Gaps = 54/422 (12%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
DV+S++TV+ G + G + ++ M LKP+S+ SI+ + + + E
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCVQN 315
IR G D + ++LID + K + + + FY + R D +++ +II+G Q
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 316 GKFDQGIGFFRQMLKAKVKPMQVSFSSVI-------------------------PACAHL 350
G + F +M ++P V+F+ +I P
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 351 TALNLG----------KQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIE- 399
T L G +L + ++G N F +S+V+ K GNI+ A + + E
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 400 ---TRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDE 456
D V +T ++ G A + ++ML G++P V F ++ G++++
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 457 GWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEA---YDFISNMGIQPTGSVWSTLL 513
G K N M IAP + ++ L+ A Y + + G+ P G + L+
Sbjct: 580 GEKLLNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 514 AA-CRAHKSVE---LAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSK 569
C+A E L +++ K V ++ Y ++ + K++ +A ++ MR +
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSV---SVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Query: 570 GL 571
GL
Sbjct: 696 GL 697
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 188/444 (42%), Gaps = 41/444 (9%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
+V S+N VI Q G +EA ++ M PD + S+++ + ++ K ++
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFY------LLPYRDAISWNSIIAGCV 313
R G + +I S+I + + ++ + AF +LP D + + ++I G
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP--DTVVYTTLIDGFC 362
Query: 314 QNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPA-CAHLTALNLGKQLHGCIIRLGFDDNK 372
+ G FF +M + P ++++++I C + GK H + G + +
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDS 421
Query: 373 FIASSLVDMYAKCGNIKMARYIFDKIE----TRDMVAWTAIIMGCAMHGHALDAVSLFEK 428
+ L++ Y K G++K A + + + + ++V +T +I G G A L +
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 429 MLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLE----HYAAVADLL 484
M + G++P + +++ +G ++E K E A GL Y + D
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE-----AAGLNADTVTYTTLMDAY 536
Query: 485 GRAGRLEEAYDFISNM---GIQPTGSVWSTLLAACRAHKSVELAEKVVDKILL--VDPEN 539
++G +++A + + M G+QPT ++ L+ H +E EK+++ +L + P N
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP-N 595
Query: 540 MGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYY 599
+ + Y K A + M S+G +G T+ K H
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRG-----------VGPDGKTYENLVKGHCKA 644
Query: 600 DKINEALNILLEQMEKEGYVLDTS 623
+ EA L ++M+ +G+ + S
Sbjct: 645 RNMKEAW-FLFQEMKGKGFSVSVS 667
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 130/304 (42%), Gaps = 32/304 (10%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
GL+ D T L+N YCK G A +V + Q GC + +
Sbjct: 416 GLEPDSVTFTELINGYCKA---GHMKDAFRVHNHMIQ--AGC---------------SPN 455
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
VV++ T+I G + G A +++ EM L+P+ FT +SI+ + ++ + +++ G
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFY------LLPYRDAISWNSIIAGCVQ 314
G + D ++L+D Y K ++ + L P +++N ++ G
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP--TIVTFNVLMNGFCL 573
Query: 315 NGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFI 374
+G + G ML + P +F+S++ L ++ + G +
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 375 ASSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFEKML 430
+LV + K N+K A ++F +++ + + ++ +I G L+A +F++M
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Query: 431 EDGV 434
+G+
Sbjct: 694 REGL 697
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 162/364 (44%), Gaps = 18/364 (4%)
Query: 198 ARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGME 257
A +V + N ++ G +N +A+ ++REM + L PD F+ ++++ F E ++ K +E
Sbjct: 139 AFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALE 198
Query: 258 IHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCV 313
+ G + LID + K +++ ++ + + D + + S+I G
Sbjct: 199 LANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFC 258
Query: 314 QNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKF 373
G+ D+G F ++L+ P ++++++I L L ++ +I G N +
Sbjct: 259 DCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVY 318
Query: 374 IASSLVDMYAKCGNIKMA----RYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKM 429
+ L+D G K A + +K E + V + II G DAV + E M
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELM 378
Query: 430 LEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIA-PGLEHYAAVADLLGRAG 488
+ RP + + +L G +DE K M KD P + Y A+ L +
Sbjct: 379 KKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKEN 438
Query: 489 RLEEAYDFISNMGIQPTGS--------VWSTLLAACRAHKSVELAEKVVDKILLVDPENM 540
RL +A D I ++ ++ G+ + ++ L A +K++EL +++ D ++ + +
Sbjct: 439 RLHQALD-IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTY 497
Query: 541 GAYV 544
A +
Sbjct: 498 TAMI 501
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/438 (21%), Positives = 182/438 (41%), Gaps = 49/438 (11%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKG-------------CKC-EI 186
GL+ DL +L+ +C + G +FDE +RG CK ++
Sbjct: 242 GLEADLVVYTSLIRGFC---DCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQL 298
Query: 187 DSVRKVFDLMPAR----DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSI 242
++F+ M R +V ++ +I G G +EAL ++ M + +P++ T + I
Sbjct: 299 KEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNII 358
Query: 243 LPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLL----P 298
+ + V +EI + D + L+ ++ + + YL+
Sbjct: 359 INKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSS 418
Query: 299 YRD--AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVS----FSSVIPACAHLTA 352
Y D IS+N++I G + + Q + + +++ +V+ +S + A A
Sbjct: 419 YTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKA 478
Query: 353 LNLGKQLHGC-IIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMVA----WT 407
+ L KQ+ I+R N ++++D + K G + +A+ + K+ ++ +
Sbjct: 479 MELWKQISDSKIVR-----NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533
Query: 408 AIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKD 467
++ G A LFE+M D P V+F ++ AG + M +
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA 593
Query: 468 FRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM---GIQPTGSVWSTLLAAC----RAHK 520
++P L Y+ + + + G L+EA F M G +P + ++L C K
Sbjct: 594 -GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDK 652
Query: 521 SVELAEKVVDKILLVDPE 538
EL +K+VDK +++D E
Sbjct: 653 LTELVKKLVDKDIVLDKE 670
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 167/387 (43%), Gaps = 43/387 (11%)
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
V + N +I + GM E L + R+M ++ ++P +T + ++ + V +
Sbjct: 187 VSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFE 246
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCVQNG 316
D+ +++I Y K + + ++ + R D I++ ++I C +
Sbjct: 247 VMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADS 306
Query: 317 KFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIAS 376
F + +++M + ++ +FS VI LN G + +IR G N I +
Sbjct: 307 DFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYT 366
Query: 377 SLVDMYAKCGNIKMARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRP 436
L+D YAK G+++ DA+ L +M+++G +P
Sbjct: 367 VLIDGYAKSGSVE-------------------------------DAIRLLHRMIDEGFKP 395
Query: 437 CYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEA--- 493
V + V+ G V+E YF++ D +A Y+++ D LG+AGR++EA
Sbjct: 396 DVVTYSVVVNGLCKNGRVEEALDYFHTCRFD-GLAINSMFYSSLIDGLGKAGRVDEAERL 454
Query: 494 YDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGAY---VLMSNIY 550
++ +S G ++ L+ A H+ V+ A + ++ + + Y +L+S ++
Sbjct: 455 FEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMF 514
Query: 551 SAAKRWKDAAKLRIHMRSKGLKKTPAC 577
R ++A KL M KG+ T AC
Sbjct: 515 K-EHRNEEALKLWDMMIDKGITPTAAC 540
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 198/459 (43%), Gaps = 89/459 (19%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPA-- 198
G++ LYT N LMN G + +F +DS +VF++M +
Sbjct: 217 GIEPTLYTYNFLMN-----------GLVSAMF-------------VDSAERVFEVMESGR 252
Query: 199 --RDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFT-------------LSSIL 243
D+V++NT+I G + G ++A++ +R+M + D T S +
Sbjct: 253 IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCV 312
Query: 244 PIFAEHVDVVKGMEI-------------------HGYA-----IRHGFDGDVFIGSSLID 279
++ E + KG+++ GY IR G +V I + LID
Sbjct: 313 ALYQEMDE--KGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID 370
Query: 280 MYAKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKP 335
YAK VE ++R + + D ++++ ++ G +NG+ ++ + +F +
Sbjct: 371 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAI 430
Query: 336 MQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIF 395
+ +SS+I ++ ++L + G + + ++L+D + K + A +F
Sbjct: 431 NSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALF 490
Query: 396 DKIETRD-----MVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSH 450
++E + + +T ++ G +A+ L++ M++ G+ P F A+ T
Sbjct: 491 KRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCL 550
Query: 451 AGLVDEGWKYFNSMEKDFRIAP-GLEHYAAVADL---LGRAGRLEEA---YDFISNMGIQ 503
+G V K + + AP G+ AA D+ L +AGR++EA D I+ G +
Sbjct: 551 SGKVARACKILDEL------APMGVILDAACEDMINTLCKAGRIKEACKLADGITERGRE 604
Query: 504 PTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMGA 542
G + + ++ A R +LA K++ + + E MG+
Sbjct: 605 VPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGS 643
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 170/389 (43%), Gaps = 23/389 (5%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCK--- 158
M LGIS + F L+ G + T +L+N +C+
Sbjct: 105 MENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR 164
Query: 159 -------VQNLGGFGSANKVFDENPQRGKGCKC-EIDSVRKVFDLMPAR----DVVSWNT 206
V ++ GFG V N CK ++++ +VF M + D V++NT
Sbjct: 165 FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 224
Query: 207 VIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHG 266
+I+G + +G + +A ++R+M K+ P+ ++++ F + ++++ ++ IR
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 284
Query: 267 FDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLP----YRDAISWNSIIAGCVQNGKFDQGI 322
+VF +SLI+ + + + F L+ + D +++N++I G ++ + + G+
Sbjct: 285 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 344
Query: 323 GFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMY 382
F +M + +++++I LN+ +++ ++ G + + L+D
Sbjct: 345 KLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCL 404
Query: 383 AKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCY 438
G I+ A + + ++ D++ + II G +A LF + GV+P
Sbjct: 405 CNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDA 464
Query: 439 VAFMAVLTACSHAGLVDEGWKYFNSMEKD 467
+A++ +++ GL E K M++D
Sbjct: 465 IAYITMISGLCRKGLQREADKLCRRMKED 493
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 133/283 (46%), Gaps = 21/283 (7%)
Query: 232 LKPDSFTLSSILP------IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCN 285
+P TL S+L F E V +V M+ G+ GF +V I +++I+ K
Sbjct: 145 FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD--GF----GFVPNVVIYNTVINGLCKNR 198
Query: 286 RVEHSLRAFYLLPYR----DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFS 341
+ ++L FY + + DA+++N++I+G +G++ R M+K K+ P + F+
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 342 SVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR 401
++I L + L+ +IR N F +SL++ + G + A+Y+FD + ++
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 402 ----DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG 457
D+V + +I G D + LF +M G+ + ++ AG ++
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 378
Query: 458 WKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM 500
K FN M D ++P + Y + D L G++E+A + ++
Sbjct: 379 QKVFNRM-VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 124/285 (43%), Gaps = 15/285 (5%)
Query: 298 PYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGK 357
P + + ++ + KFD I + +M + SF+ +I + L+L
Sbjct: 75 PIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLAL 134
Query: 358 QLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIE----TRDMVAWTAIIMGC 413
L G +++LGF + SL++ + + + A + D ++ ++V + +I G
Sbjct: 135 ALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGL 194
Query: 414 AMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPG 473
+ +A+ +F M + G+R V + +++ S++G + + M K +I P
Sbjct: 195 CKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR-KIDPN 253
Query: 474 LEHYAAVADLLGRAGRLEEAYDFISNM---GIQPTGSVWSTLLAACRAHKSVELAEKVVD 530
+ + A+ D + G L EA + M + P +++L+ H + A+ + D
Sbjct: 254 VIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFD 313
Query: 531 KILLVD----PENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGL 571
L+V P+ + L++ + +KR +D KL M +GL
Sbjct: 314 --LMVSKGCFPDVVTYNTLITG-FCKSKRVEDGMKLFCEMTYQGL 355
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 162/374 (43%), Gaps = 28/374 (7%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
M LG P R SL+ G D+ NA+++ CK +
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
+ A F E ++G + P +VV++ ++ G + + +A
Sbjct: 206 VN---DAFDFFKEIERKG---------------IRP--NVVTYTALVNGLCNSSRWSDAA 245
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMY 281
++ +M K+ P+ T S++L F ++ V++ E+ +R D D+ SSLI+
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 282 AKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQ 337
+R++ + + F L+ + D +S+N++I G + + + G+ FR+M + +
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 338 VSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDK 397
V+++++I ++ ++ + G + + + L+ G ++ A IF+
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 398 IETR----DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGL 453
++ R D+V +T +I G G +A SLF + G++P V + +++ GL
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Query: 454 VDEGWKYFNSMEKD 467
+ E + M+++
Sbjct: 486 LHEVEALYTKMKQE 499
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/340 (19%), Positives = 160/340 (47%), Gaps = 12/340 (3%)
Query: 197 PARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGM 256
P +V +N +++ + + + + ++M ++ D +T + ++ F V +
Sbjct: 81 PFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLAL 140
Query: 257 EIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLR---AFYLLPYR-DAISWNSIIAGC 312
I G ++ G++ D SL++ + + NRV ++ + Y+ D +++N+II
Sbjct: 141 SILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSL 200
Query: 313 VQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNK 372
+ + + FF+++ + ++P V++++++ + + + +L +I+ N
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 260
Query: 373 FIASSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFEK 428
S+L+D + K G + A+ +F+++ D+V ++++I G +H +A +F+
Sbjct: 261 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Query: 429 MLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAG 488
M+ G V++ ++ A V++G K F M + ++ + + + +AG
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF-QAG 379
Query: 489 RLEEAYDFISNM---GIQPTGSVWSTLLAACRAHKSVELA 525
+++A +F S M GI P ++ LL + +E A
Sbjct: 380 DVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 134/284 (47%), Gaps = 13/284 (4%)
Query: 298 PYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGK 357
P+ + +N +++ V+ K+D I ++M ++ +F+ VI ++L
Sbjct: 81 PFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLAL 140
Query: 358 QLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKI----ETRDMVAWTAIIMGC 413
+ G +++LG++ ++ SLV+ + + + A + DK+ D+VA+ AII
Sbjct: 141 SILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSL 200
Query: 414 AMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPG 473
DA F+++ G+RP V + A++ ++ + + + M K +I P
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KITPN 259
Query: 474 LEHYAAVADLLGRAGRLEEA---YDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVD 530
+ Y+A+ D + G++ EA ++ + M I P +S+L+ H ++ A ++ D
Sbjct: 260 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 319
Query: 531 KILLVDP---ENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGL 571
L+V ++ +Y + N + AKR +D KL M +GL
Sbjct: 320 --LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 126/267 (47%), Gaps = 19/267 (7%)
Query: 317 KFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHL----TALNLGKQLHGCIIRLGFDDNK 372
K + I F M+K++ P V F+ ++ A L ++LGK++ LG ++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKME----VLGIRNDL 120
Query: 373 FIASSLVDMYAKCGNIKMARYIFDKI----ETRDMVAWTAIIMGCAMHGHALDAVSLFEK 428
+ + +++ + C + +A I K+ D V +++ G DAVSL +K
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 429 MLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAG 488
M+E G +P VA+ A++ + V++ + +F +E+ I P + Y A+ + L +
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK-GIRPNVVTYTALVNGLCNSS 239
Query: 489 RLEEAYDFISNM---GIQPTGSVWSTLLAACRAHKSVELAEKVVDKI--LLVDPENMGAY 543
R +A +S+M I P +S LL A + V A+++ +++ + +DP+ + Y
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD-IVTY 298
Query: 544 VLMSNIYSAAKRWKDAAKLRIHMRSKG 570
+ N R +A ++ M SKG
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKG 325
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 158/370 (42%), Gaps = 30/370 (8%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G+ DLYT N LMN +C+ +++ + + GK K + D
Sbjct: 102 GVSHDLYTCNLLMNCFCQ---------SSQPYLASSFLGKMMKLGFEP-----------D 141
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
+V++ ++I G EA+ MV +M + +KPD ++I+ ++ V + +
Sbjct: 142 IVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFD 201
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNR---VEHSLRAFYLLPYR-DAISWNSIIAGCVQNG 316
+G DV + +SL++ R + LR + D I++N++I V+ G
Sbjct: 202 QMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEG 261
Query: 317 KFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIAS 376
KF + +M++ + P +++S+I ++ +Q+ + G + +
Sbjct: 262 KFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYT 321
Query: 377 SLVDMYAKCGNIKMARYIFDKIE----TRDMVAWTAIIMGCAMHGHALDAVSLFEKMLED 432
SL++ + KC + A IF ++ T + + +T +I G G A +F M+
Sbjct: 322 SLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR 381
Query: 433 GVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFR--IAPGLEHYAAVADLLGRAGRL 490
GV P + +L + G V + F M+K +AP + Y + L G+L
Sbjct: 382 GVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKL 441
Query: 491 EEAYDFISNM 500
E+A +M
Sbjct: 442 EKALMVFEDM 451
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/427 (18%), Positives = 173/427 (40%), Gaps = 53/427 (12%)
Query: 197 PARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGM 256
P ++ + ++ A+ F +++ + + D +T + ++ F +
Sbjct: 68 PLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLAS 127
Query: 257 EIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAF---------------------- 294
G ++ GF+ D+ +SLI+ + NR+E ++
Sbjct: 128 SFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSL 187
Query: 295 -------YLLPY----------RDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQ 337
Y L D + + S++ G +G++ R M K K+KP
Sbjct: 188 CKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDV 247
Query: 338 VSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDK 397
++F+++I A ++L+ +IR+ N F +SL++ + G + AR +F
Sbjct: 248 ITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYL 307
Query: 398 IETR----DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGL 453
+ET+ D+VA+T++I G DA+ +F +M + G+ + + ++ G
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367
Query: 454 VDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM------GIQPTGS 507
+ + F+ M + P + Y + L G++++A +M G+ P
Sbjct: 368 PNVAQEVFSHMVSR-GVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIW 426
Query: 508 VWSTLLAACRAHKSVELAEKVVDKILL--VDPENMGAYVLMSNIYSAAKRWKDAAKLRIH 565
++ LL + +E A V + + +D + +++ + A K K+A L
Sbjct: 427 TYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGK-VKNAVNLFCS 485
Query: 566 MRSKGLK 572
+ SKG+K
Sbjct: 486 LPSKGVK 492
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 130/287 (45%), Gaps = 27/287 (9%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
DV+++N +I + G F +A ++ EM + P+ FT +S++ F V + ++
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF 305
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCVQN 315
G DV +SLI+ + KC +V+ +++ FY + + + I++ ++I G Q
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQV 365
Query: 316 GKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDD----- 370
GK + F M+ V P +++ ++ H N GK +I F+D
Sbjct: 366 GKPNVAQEVFSHMVSRGVPPNIRTYNVLL----HCLCYN-GKVKKALMI---FEDMQKRE 417
Query: 371 ------NKFIASSLVDMYAKCGNIKMARYIFDKIETRDM----VAWTAIIMGCAMHGHAL 420
N + + L+ G ++ A +F+ + R+M + +T II G G
Sbjct: 418 MDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVK 477
Query: 421 DAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKD 467
+AV+LF + GV+P V + +++ GL E F M++D
Sbjct: 478 NAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKED 524
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 136/318 (42%), Gaps = 50/318 (15%)
Query: 300 RDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSS-------------VIPA 346
R ++ I+ + + +F++ + F M++++ P + F+ VI
Sbjct: 35 RAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINL 94
Query: 347 CAHLTALNLGKQLHGC----------------------IIRLGFDDNKFIASSLVDMYAK 384
C HL + + L+ C +++LGF+ + +SL++ +
Sbjct: 95 CDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCL 154
Query: 385 CGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVA 440
++ A + +++ D+V +T II +GH A+SLF++M G+RP V
Sbjct: 155 GNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVM 214
Query: 441 FMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRL---EEAYDFI 497
+ +++ ++G + M K +I P + + A+ D + G+ EE Y+ +
Sbjct: 215 YTSLVNGLCNSGRWRDADSLLRGMTKR-KIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Query: 498 SNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPE----NMGAYVLMSNIYSAA 553
M I P +++L+ V+ A ++ L++ + ++ AY + N +
Sbjct: 274 IRMSIAPNIFTYTSLINGFCMEGCVDEARQM---FYLMETKGCFPDVVAYTSLINGFCKC 330
Query: 554 KRWKDAAKLRIHMRSKGL 571
K+ DA K+ M KGL
Sbjct: 331 KKVDDAMKIFYEMSQKGL 348
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 146/309 (47%), Gaps = 9/309 (2%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
+VV+++++I+ G + +A ++ +M + K+ PD FT S+++ F + +V+ +++
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLP----YRDAISWNSIIAGCVQN 315
++ D + SSLI+ + +R++ + + F + + D +++N++I G +
Sbjct: 350 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 409
Query: 316 GKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIA 375
+ ++G+ FR+M + + V+++ +I ++ +++ ++ G N
Sbjct: 410 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 469
Query: 376 SSLVDMYAKCGNIKMARYIFDKIETRDM----VAWTAIIMGCAMHGHALDAVSLFEKMLE 431
++L+D K G ++ A +F+ ++ M + +I G G D LF +
Sbjct: 470 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL 529
Query: 432 DGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLE 491
GV+P VA+ +++ G +E F M++D + P Y + R G E
Sbjct: 530 KGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL-PNSGCYNTLIRARLRDGDRE 588
Query: 492 EAYDFISNM 500
+ + I M
Sbjct: 589 ASAELIKEM 597
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 168/388 (43%), Gaps = 19/388 (4%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
++V+ ++++ G + EA+ +V +M +P++ T ++++ H + M +
Sbjct: 150 NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALI 209
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD-------AISWNSIIAGC 312
+ G D+ +++ C R + L AF LL + + +N+II G
Sbjct: 210 DRMVAKGCQPDLVTYGVVVN--GLCKRGDTDL-AFNLLNKMEQGKLEPGVLIYNTIIDGL 266
Query: 313 VQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNK 372
+ D + F++M ++P V++SS+I + + +L +I + +
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 373 FIASSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFEK 428
F S+L+D + K G + A ++D++ R +V ++++I G MH +A +FE
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 429 MLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAG 488
M+ P V + ++ V+EG + F M + + + + + L +AG
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF-QAG 445
Query: 489 RLEEAYDFISNM---GIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPE-NMGAYV 544
+ A + M G+ P ++TLL + +E A V + + E + Y
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Query: 545 LMSNIYSAAKRWKDAAKLRIHMRSKGLK 572
+M A + +D L ++ KG+K
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVK 533
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 104/224 (46%), Gaps = 8/224 (3%)
Query: 298 PYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGK 357
P+ I ++ +++ + KFD I QM + ++S +I + L L
Sbjct: 77 PFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLAL 136
Query: 358 QLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGC 413
+ G +++LG++ N SSL++ Y I A + D++ + V + +I G
Sbjct: 137 AVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGL 196
Query: 414 AMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPG 473
+H A +A++L ++M+ G +P V + V+ G D + N ME+ ++ PG
Sbjct: 197 FLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG-KLEPG 255
Query: 474 LEHYAAVADLLGRAGRLEEAYDFISNM---GIQPTGSVWSTLLA 514
+ Y + D L + +++A + M GI+P +S+L++
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/378 (18%), Positives = 168/378 (44%), Gaps = 16/378 (4%)
Query: 166 GSANKVFDENPQRGKGCKCEIDSVRKVFDLM----PARDVVSWNTVIAGNAQNGMFREAL 221
G + + E R + ++D +F M P ++ ++ +++ A+ F +
Sbjct: 42 GKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVI 101
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMY 281
+ +M + + + +T S ++ F + + + G ++ G++ ++ SSL++ Y
Sbjct: 102 SLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGY 161
Query: 282 AKCNRVEHSLR---AFYLLPYR-DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQ 337
R+ ++ ++ Y+ + +++N++I G + K + + +M+ +P
Sbjct: 162 CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 221
Query: 338 VSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDK 397
V++ V+ +L L + + + I ++++D K ++ A +F +
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 398 IETR----DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGL 453
+ET+ ++V ++++I +G DA L M+E + P F A++ A G
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 454 VDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEA---YDFISNMGIQPTGSVWS 510
+ E K ++ M K I P + Y+++ + RL+EA ++F+ + P ++
Sbjct: 342 LVEAEKLYDEMVKR-SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN 400
Query: 511 TLLAACRAHKSVELAEKV 528
TL+ +K VE +V
Sbjct: 401 TLIKGFCKYKRVEEGMEV 418
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 175/393 (44%), Gaps = 36/393 (9%)
Query: 179 GKGCKCEIDSVRKVFDLMPAR----DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKP 234
GKG E V K FD M D +++N+++A ++ G++ A ++ EM + +++
Sbjct: 314 GKG-GMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQ 372
Query: 235 DSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAF 294
D F+ +++L + + EI +V S++ID +AK R + +L F
Sbjct: 373 DVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLF 432
Query: 295 ----YLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHL 350
YL D +S+N++++ + G+ ++ + R+M +K V++++++
Sbjct: 433 GEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQ 492
Query: 351 TALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR----DMVAW 406
+ K++ + R N S+L+D Y+K G K A IF + ++ D+V +
Sbjct: 493 GKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLY 552
Query: 407 TAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEK 466
+A+I +G AVSL ++M ++G+ P V + +++ A + +D Y N
Sbjct: 553 SALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSL 612
Query: 467 DFRIA--PGLEHYAA--VADLLGR--------------AGRLE-----EAYDFISNMGIQ 503
F + L V L G+ G E E + + + I+
Sbjct: 613 PFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIK 672
Query: 504 PTGSVWSTLLAACRAHKSVELAEKVVDKILLVD 536
P +S +L AC S E A +++++ L D
Sbjct: 673 PNVVTFSAILNACSRCNSFEDASMLLEELRLFD 705
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 157/343 (45%), Gaps = 13/343 (3%)
Query: 191 KVFDLMPARDVVSWNTVIAGNAQNGM-FREALDMVREMGDDKLKPDSFTLSSILPIFAEH 249
K + L P ++V++N VI + GM F++ EM + ++PD T +S+L + +
Sbjct: 295 KEYGLRP--NLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRG 352
Query: 250 VDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISW 305
+ + DVF ++L+D K +++ + +P + + +S+
Sbjct: 353 GLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 306 NSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIR 365
+++I G + G+FD+ + F +M + +VS+++++ + + +
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 366 LGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALD 421
+G + ++L+ Y K G + +F +++ +++ ++ +I G + G +
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 422 AVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVA 481
A+ +F + G+R V + A++ A GLV + M K+ I+P + Y ++
Sbjct: 533 AMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE-GISPNVVTYNSII 591
Query: 482 DLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAACRAHKSVEL 524
D GR+ ++ + D+ SN G P S + L ++ ++L
Sbjct: 592 DAFGRSATMDRSADY-SNGGSLPFSSSALSALTETEGNRVIQL 633
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 149/336 (44%), Gaps = 31/336 (9%)
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
V +++ +I+ ++G+ EA+ + M + L+P+ T ++++ + GME
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGK-----GGMEFKQ 322
Query: 261 YA------IRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNSIIA 310
A R+G D +SL+ + ++ E + F + R D S+N+++
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 311 GCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDD 370
+ G+ D QM ++ P VS+S+VI A + L G + LG
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442
Query: 371 NKFIASSLVDMYAKCGNIKMARYIFDKIET----RDMVAWTAIIMGCAMHGHALDAVSLF 426
++ ++L+ +Y K G + A I ++ + +D+V + A++ G G + +F
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 427 EKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEH----YAAVAD 482
+M + V P + + ++ S GL E + F ++F+ A GL Y+A+ D
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF----REFKSA-GLRADVVLYSALID 557
Query: 483 LLGRAGRLEEAYDFISNM---GIQPTGSVWSTLLAA 515
L + G + A I M GI P +++++ A
Sbjct: 558 ALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 128/269 (47%), Gaps = 18/269 (6%)
Query: 319 DQGIGFFRQMLKAKVKPMQVS--FSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIAS 376
D+ +GF+ +K + + + S++I + + K++ G+ + + S
Sbjct: 213 DKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFS 272
Query: 377 SLVDMYAKCGNIKMARYIFDKIET----RDMVAWTAIIMGCAMHGHALDAVS-LFEKMLE 431
+L+ Y + G + A +F+ ++ ++V + A+I C G V+ F++M
Sbjct: 273 ALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQR 332
Query: 432 DGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLE 491
+GV+P + F ++L CS GL + F+ M + RI + Y + D + + G+++
Sbjct: 333 NGVQPDRITFNSLLAVCSRGGLWEAARNLFDEM-TNRRIEQDVFSYNTLLDAICKGGQMD 391
Query: 492 EAYDFISNMGIQ---PTGSVWSTLL----AACRAHKSVELAEKVVDKILLVDPENMGAYV 544
A++ ++ M ++ P +ST++ A R +++ L ++ + L + + +
Sbjct: 392 LAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM--RYLGIALDRVSYNT 449
Query: 545 LMSNIYSAAKRWKDAAKLRIHMRSKGLKK 573
L+S IY+ R ++A + M S G+KK
Sbjct: 450 LLS-IYTKVGRSEEALDILREMASVGIKK 477
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 129/331 (38%), Gaps = 57/331 (17%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
MR LGI+ R + +LL T G+ D+ T NAL
Sbjct: 435 MRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNAL--------- 485
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPAR----DVVSWNTVIAGNAQNGMF 217
LGG+G K D V+KVF M ++++++T+I G ++ G++
Sbjct: 486 LGGYGKQGKY---------------DEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLY 530
Query: 218 REALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSL 277
+EA+++ RE L+ D S+++ ++ V + + + G +V +S+
Sbjct: 531 KEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSI 590
Query: 278 IDMYAKCNRVEHSL------------------------RAFYLLPYRDAISWNSIIAGCV 313
ID + + ++ S R L S N C
Sbjct: 591 IDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCE 650
Query: 314 QN-GKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNK 372
+ + + FR+M + ++KP V+FS+++ AC+ + L + L DNK
Sbjct: 651 EGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASML---LEELRLFDNK 707
Query: 373 FIASSLVDMYAKCGNIKM-ARYIFDKIETRD 402
+ + N+ + A+ +FDK+ D
Sbjct: 708 VYGVVHGLLMGQRENVWLQAQSLFDKVNEMD 738
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 133/276 (48%), Gaps = 8/276 (2%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
+VV++N++I G + +A ++ +M + K+ P+ T S+++ F + +V+ +++
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD----AISWNSIIAGCVQN 315
I+ D D+F SSLI+ + +R++ + F L+ +D +++N++I G +
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 316 GKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIA 375
+ D+G+ FR+M + + V+++++I + + + ++ G +
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Query: 376 SSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFEKMLE 431
S L+D G ++ A +F+ ++ D+ + +I G G D LF +
Sbjct: 470 SILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 529
Query: 432 DGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKD 467
GV+P V + +++ GL +E F M+++
Sbjct: 530 KGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/447 (20%), Positives = 180/447 (40%), Gaps = 39/447 (8%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G+ +LYT + L+N +C+ L + + K+ L D
Sbjct: 111 GISHNLYTYSILINCFCRRSQLS--------------------LALAVLAKMMKLGYEPD 150
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
+V+ N+++ G +A+ +V +M + +PDSFT ++++ H + + +
Sbjct: 151 IVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVD 210
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD-------AISWNSIIAGCV 313
+ G D+ +++ C R + L A LL + + +N+II
Sbjct: 211 RMVVKGCQPDLVTYGIVVN--GLCKRGDIDL-ALSLLKKMEQGKIEPGVVIYNTIIDALC 267
Query: 314 QNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKF 373
+ + F +M ++P V+++S+I + + +L +I + N
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 374 IASSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFEKM 429
S+L+D + K G + A ++D++ R D+ ++++I G MH +A +FE M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387
Query: 430 LEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGR 489
+ P V + ++ A VDEG + F M + + + + + +A
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFF-QARE 446
Query: 490 LEEAYDFISNM---GIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPE-NMGAYVL 545
+ A M G+ P +S LL + VE A V + + E ++ Y +
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506
Query: 546 MSNIYSAAKRWKDAAKLRIHMRSKGLK 572
M A + +D L + KG+K
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/342 (18%), Positives = 154/342 (45%), Gaps = 13/342 (3%)
Query: 197 PARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGM 256
P +V ++ +++ A+ F + + +M + + + +T S ++ F + +
Sbjct: 77 PFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLAL 136
Query: 257 EIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLR---AFYLLPYR-DAISWNSIIAGC 312
+ ++ G++ D+ +SL++ + NR+ ++ + Y+ D+ ++N++I G
Sbjct: 137 AVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGL 196
Query: 313 VQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNK 372
++ + + + +M+ +P V++ V+ ++L L + + +
Sbjct: 197 FRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGV 256
Query: 373 FIASSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFEK 428
I ++++D N+ A +F +++ + ++V + ++I +G DA L
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 429 MLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAG 488
M+E + P V F A++ A G + E K ++ M K I P + Y+++ +
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHD 375
Query: 489 RLEEA---YDFISNMGIQPTGSVWSTLLAA-CRAHKSVELAE 526
RL+EA ++ + + P ++TL+ C+A + E E
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 105/259 (40%), Gaps = 19/259 (7%)
Query: 317 KFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIAS 376
K D + F M+K++ P V FS ++ A A + +L L + LG N + S
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 377 SLVDMYAKCGNIKMARYIFDKI----ETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLED 432
L++ + + + +A + K+ D+V +++ G DAVSL +M+E
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 433 GVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEE 492
G +P F ++ E + M P L Y V + L + G ++
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK-GCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 493 AYDFISNM---GIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPENMG------AY 543
A + M I+P +++T++ A +K+V A L + +N G Y
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALN-----LFTEMDNKGIRPNVVTY 294
Query: 544 VLMSNIYSAAKRWKDAAKL 562
+ RW DA++L
Sbjct: 295 NSLIRCLCNYGRWSDASRL 313
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 170/417 (40%), Gaps = 52/417 (12%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
D+ S+N VI + F AL +V +M +PD T+SS++ F + V +++
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLP----YRDAISWNSIIAGCVQN 315
GF DV I +++ID K V ++ F + DA+++NS++AG +
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 316 GKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIA 375
G++ R M+ + P ++F++VI
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVI------------------------------- 251
Query: 376 SSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFEKMLE 431
D++ K G A +++++ R D+ + ++I G MHG +A + + M+
Sbjct: 252 ----DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVT 307
Query: 432 DGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLE 491
G P V + ++ + VDEG K F M + + + + + +AGR +
Sbjct: 308 KGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF-QAGRPD 366
Query: 492 EAYDFISNMGIQPTGSVWSTLLAAC----RAHKSVELAEKVVDKILLVDPENMGAYVLMS 547
A + S M +P +S LL R K++ L E + + +D + Y ++
Sbjct: 367 AAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD---ITTYNIVI 423
Query: 548 NIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKSHPYYDKINE 604
+ +DA L + KGLK S+ + + DKS Y K+ E
Sbjct: 424 HGMCKIGNVEDAWDLFRSLSCKGLKPD-VVSYTTMISGFCRKRQWDKSDLLYRKMQE 479
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 159/352 (45%), Gaps = 30/352 (8%)
Query: 141 GLDFDLYTANALMNMYCK----------VQNLGGFGSANKVFDENPQRGKGCKCE-IDSV 189
G + D+ T ++L+N +C+ V + G V N CK ++
Sbjct: 134 GYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDA 193
Query: 190 RKVFDLMPA----RDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
++FD M D V++N+++AG +G + +A ++R+M + P+ T ++++ +
Sbjct: 194 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----D 301
F + + M+++ R D DVF +SLI+ RV+ + + L+ + D
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD 313
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
+++N++I G ++ + D+G FR+M + + ++++++I + +++
Sbjct: 314 VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS 373
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGN--IKMARYIFDKIETR----DMVAWTAIIMGCAM 415
D I + + +Y C N ++ A +F+ ++ D+ + +I G
Sbjct: 374 -----RMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428
Query: 416 HGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKD 467
G+ DA LF + G++P V++ +++ D+ + M++D
Sbjct: 429 IGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED 480
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 124/311 (39%), Gaps = 46/311 (14%)
Query: 305 WNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCII 364
W + + ++ I F +M++++ P V FS V+ A +L L +
Sbjct: 37 WGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHME 96
Query: 365 RLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKI----ETRDMVAWTAIIMGCAMHGHAL 420
G + + + +++ +C +A + K+ D+V +++I G
Sbjct: 97 VCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF 156
Query: 421 DAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKD------------- 467
DA+ L KM E G RP V + ++ GLV++ + F+ ME+D
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
Query: 468 ---------------------FRIAPGLEHYAAVADLLGRAGRLEEA---YDFISNMGIQ 503
I P + + AV D+ + G+ EA Y+ ++ +
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 276
Query: 504 PTGSVWSTLLAACRAHKSVELAEKVVDKILLVDP---ENMGAYVLMSNIYSAAKRWKDAA 560
P +++L+ H V+ A++++D L+V ++ Y + N + +KR +
Sbjct: 277 PDVFTYNSLINGLCMHGRVDEAKQMLD--LMVTKGCLPDVVTYNTLINGFCKSKRVDEGT 334
Query: 561 KLRIHMRSKGL 571
KL M +GL
Sbjct: 335 KLFREMAQRGL 345
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/431 (20%), Positives = 177/431 (41%), Gaps = 59/431 (13%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
++ G +PT + L+ T G+ +L T + ++N + K+++
Sbjct: 475 LKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKD 534
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
+ +A VF++ + G + P DV+ +N +I+ G A+
Sbjct: 535 ---WANAFAVFEDMVKEG---------------MKP--DVILYNNIISAFCGMGNMDRAI 574
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMY 281
V+EM + +P T + +PI IHGYA GD+ + DM
Sbjct: 575 QTVKEMQKLRHRP---TTRTFMPI------------IHGYAK----SGDMRRSLEVFDMM 615
Query: 282 AKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFS 341
+C V ++N +I G V+ + ++ + +M A V + +++
Sbjct: 616 RRCGCVP------------TVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYT 663
Query: 342 SVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR 401
++ A + + + G D + F +L+ K G ++ A + ++ R
Sbjct: 664 KIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSAR 723
Query: 402 DM----VAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG 457
++ + +I G A G +A L ++M ++GV+P + + ++ACS AG ++
Sbjct: 724 NIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRA 783
Query: 458 WKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEA---YDFISNMGIQPTGSVWSTLLA 514
+ ME + P ++ Y + RA E+A Y+ + MGI+P +V+ LL
Sbjct: 784 TQTIEEMEA-LGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLT 842
Query: 515 ACRAHKSVELA 525
+ + S+ A
Sbjct: 843 SLLSRASIAEA 853
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 100/523 (19%), Positives = 192/523 (36%), Gaps = 70/523 (13%)
Query: 102 MRALGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQN 161
MRA GI+PT + SL+ A G++ L T + ++ + K
Sbjct: 335 MRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKA-- 392
Query: 162 LGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREAL 221
G +A+ FDE + K I + +I + Q A
Sbjct: 393 -GHAEAADYWFDEAKRIHKTLNASI-----------------YGKIIYAHCQTCNMERAE 434
Query: 222 DMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMY 281
+VREM ++ + +++ + D KG+ + GF V LI++Y
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLY 494
Query: 282 AKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQ 337
K ++ +L ++ + +++ +I G V+ + F M+K +KP
Sbjct: 495 TKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 554
Query: 338 VSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDK 397
+ ++++I A + ++ Q + +L ++ YAK G+++ + +FD
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 614
Query: 398 --------------------IETRDMV-------------------AWTAIIMGCAMHGH 418
+E R M +T I+ G A G
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 674
Query: 419 ALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYA 478
A F ++ +G+ + A+L AC +G + M I Y
Sbjct: 675 TGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSAR-NIPRNSFVYN 733
Query: 479 AVADLLGRAGRLEEAYDFISNM---GIQPTGSVWSTLLAACRAHKSVELAEKVVDKI--L 533
+ D R G + EA D I M G++P +++ ++AC + A + ++++ L
Sbjct: 734 ILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL 793
Query: 534 LVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPA 576
V P N+ Y + ++ A + A M++ G+K A
Sbjct: 794 GVKP-NIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKA 835
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 160/353 (45%), Gaps = 29/353 (8%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKG-----------CKCE---I 186
G + DL T +L+N YC + A +FD+ G C C+ +
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIE---DAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHL 204
Query: 187 DSVRKVFDLMPAR----DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSI 242
+ ++F+ M +VV++N ++ G + G + +A ++R+M +++P+ T +++
Sbjct: 205 NHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTAL 264
Query: 243 LPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLP---- 298
+ F + +++ E++ I+ DVF SLI+ ++ + + FYL+
Sbjct: 265 IDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC 324
Query: 299 YRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQ 358
Y + + + ++I G ++ + + G+ F +M + V ++++ +I + ++ ++
Sbjct: 325 YPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQE 384
Query: 359 LHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDM----VAWTAIIMGCA 414
+ + + + L+D G ++ A IF+ + R+M V +T II G
Sbjct: 385 VFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMC 444
Query: 415 MHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKD 467
G DA LF + G++P + + +++ GL+ E F M++D
Sbjct: 445 KLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED 497
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 120/270 (44%), Gaps = 9/270 (3%)
Query: 232 LKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSL 291
+PD T +S+L + + + + + GF +V ++LI K + H++
Sbjct: 149 FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208
Query: 292 RAFYLLPYR----DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPAC 347
F + + +++N+++ G + G++ R M+K +++P ++F+++I A
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAF 268
Query: 348 AHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR----DM 403
+ L K+L+ +I++ + F SL++ G + AR +F +E +
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
Query: 404 VAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNS 463
V +T +I G D + +F +M + GV + + ++ G D + FN
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 464 MEKDFRIAPGLEHYAAVADLLGRAGRLEEA 493
M R P + Y + D L G++E+A
Sbjct: 389 MSSR-RAPPDIRTYNVLLDGLCCNGKVEKA 417
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/422 (18%), Positives = 173/422 (40%), Gaps = 50/422 (11%)
Query: 199 RDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAE--HVDVV--- 253
R S+ ++ N F +ALD+ M + P + +L + A+ DVV
Sbjct: 46 RAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISL 105
Query: 254 -KGMEIHGYA-----------------------------IRHGFDGDVFIGSSLIDMYAK 283
+ M+I G ++ GF+ D+ +SL++ Y
Sbjct: 106 FEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCH 165
Query: 284 CNRVEHSLRAFYLL------PYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQ 337
NR+E ++ F + P + +++ ++I +N + + F QM +P
Sbjct: 166 WNRIEDAIALFDQILGMGFKP--NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV 223
Query: 338 VSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDK 397
V++++++ + L +++ + N ++L+D + K G + A+ +++
Sbjct: 224 VTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNV 283
Query: 398 IETR----DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGL 453
+ D+ + ++I G M+G +A +F M +G P V + ++ +
Sbjct: 284 MIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKR 343
Query: 454 VDEGWKYFNSMEKDFRIAPGLEHYAAVAD--LLGRAGRLEEAYDFISNMGIQPTGSVWST 511
V++G K F M + +A + + + L+GR +E ++ +S+ P ++
Sbjct: 344 VEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNV 403
Query: 512 LLAACRAHKSVELAEKVVDKILLVDPE-NMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKG 570
LL + VE A + + + + + N+ Y ++ + +DA L + SKG
Sbjct: 404 LLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKG 463
Query: 571 LK 572
+K
Sbjct: 464 MK 465
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 130/294 (44%), Gaps = 12/294 (4%)
Query: 186 IDSVRKVFDLMPAR----DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
+D+ +F+ M + +++++N +I G G + + ++R+M K+ P+ T S
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR- 300
++ F + + + E+H I G D +SLID + K N ++ + + L+ +
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 301 ---DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGK 357
+ ++N +I G + + D G+ FR+M V V+++++I L LN+ K
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 358 QLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGC 413
+L ++ N L+D G + A IF+KIE D+ + II G
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518
Query: 414 AMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKD 467
DA LF + GV+P + ++ G + E F ME+D
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 572
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 162/383 (42%), Gaps = 24/383 (6%)
Query: 141 GLDFDLYTANALMNMYCKVQNLG-GFGSANKVFDENPQRG--------KGCKCE------ 185
G+ +LYT + ++N +C+ + L F + K+ + G E
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 177
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
++ V ++ ++ D+++ NT++ G +G EA+ ++ +M + +P++ T +L +
Sbjct: 178 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 237
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----D 301
+ ME+ D S +ID K ++++ F + + +
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
I++N +I G G++D G R M+K K+ P V+FS +I + L ++LH
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK 357
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHG 417
+I G + +SL+D + K ++ A + D + ++ ++ + +I G
Sbjct: 358 EMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 417
Query: 418 HALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHY 477
D + LF KM GV V + ++ G ++ + F M ++ P + Y
Sbjct: 418 RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR-KVPPNIVTY 476
Query: 478 AAVADLLGRAGRLEEAYDFISNM 500
+ D L G E+A + +
Sbjct: 477 KILLDGLCDNGESEKALEIFEKI 499
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 164/399 (41%), Gaps = 50/399 (12%)
Query: 186 IDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
ID R + P V+ ++ + + A+ + L + ++M + + +TLS ++
Sbjct: 73 IDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINC 132
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSL----RAFYLLPYRD 301
F + G I+ G++ + S+LI+ RV +L R + D
Sbjct: 133 FCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPD 192
Query: 302 AISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHG 361
I+ N+++ G +GK + + +M++ +P V++ V+
Sbjct: 193 LITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVL----------------- 235
Query: 362 CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHG 417
++ K G +A + K+E R D V ++ II G HG
Sbjct: 236 ------------------NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG 277
Query: 418 HALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHY 477
+A +LF +M G+ + + ++ +AG D+G K M K +I P + +
Sbjct: 278 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-KINPNVVTF 336
Query: 478 AAVADLLGRAGRLEEAYDFISNM---GIQPTGSVWSTLLAACRAHKSVELAEKVVDKILL 534
+ + D + G+L EA + M GI P +++L+ ++ A ++VD ++
Sbjct: 337 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 396
Query: 535 --VDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGL 571
DP N+ + ++ N Y A R D +L M +G+
Sbjct: 397 KGCDP-NIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 148/326 (45%), Gaps = 14/326 (4%)
Query: 184 CEIDSVRKVFDLMPAR----DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTL 239
C++ + L+ R D V++NTVI+G ++G+ EA + EM + PD+ +
Sbjct: 140 CKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSY 199
Query: 240 SSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPY 299
++++ F + + V+ + + + ++ + L+ Y + +E + R + +
Sbjct: 200 NTLIDGFCKVGNFVRAKAL----VDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGF 255
Query: 300 -RDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQ 358
D ++++SII + GK +G R+M + V P V++++++ +
Sbjct: 256 DPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALA 315
Query: 359 LHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKI----ETRDMVAWTAIIMGCA 414
L+ ++ G + + + L+D K G+++ A F + + ++V +TA++ G
Sbjct: 316 LYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLC 375
Query: 415 MHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGL 474
G A + +MLE V P V + +++ G+++E ME D + P
Sbjct: 376 KAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKME-DQNVVPNG 434
Query: 475 EHYAAVADLLGRAGRLEEAYDFISNM 500
Y V D L +AG+ E A + M
Sbjct: 435 FTYGTVIDGLFKAGKEEMAIELSKEM 460
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 150/359 (41%), Gaps = 50/359 (13%)
Query: 258 IHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCV 313
I+ I G DVF + LI + K R+ A LL R D +++N++I+G
Sbjct: 116 IYSKMIACGVSPDVFALNVLIHSFCKVGRLSF---AISLLRNRVISIDTVTYNTVISGLC 172
Query: 314 QNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPA----------------------CAHLT 351
++G D+ F +M+K + P VS++++I H
Sbjct: 173 EHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTI 232
Query: 352 ALNLGKQLHGC------IIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDM-- 403
L+ LH ++ GFD + SS+++ K G + + ++E +
Sbjct: 233 LLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYP 292
Query: 404 --VAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYF 461
V +T ++ A++L+ +M+ G+ V + ++ AG + E K F
Sbjct: 293 NHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTF 352
Query: 462 NSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM---GIQPTGSVWSTLLAAC-- 516
+ +D ++ P + Y A+ D L +AG L A I+ M + P +S+++
Sbjct: 353 KMLLEDNQV-PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVK 411
Query: 517 --RAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKK 573
++V L K+ D+ ++ P ++ ++ A K + A +L MR G+++
Sbjct: 412 KGMLEEAVSLLRKMEDQNVV--PNGFTYGTVIDGLFKAGKE-EMAIELSKEMRLIGVEE 467
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/350 (19%), Positives = 141/350 (40%), Gaps = 42/350 (12%)
Query: 303 ISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGC 362
+S N ++ +NGK ++ I QM+ ++ P ++ + + + + H
Sbjct: 609 MSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHET 668
Query: 363 IIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGH 418
++ G ++ + ++L+ K G K A + +E R D V + +++ G + H
Sbjct: 669 LLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSH 728
Query: 419 ALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYA 478
A+S + M+E G+ P + ++ S AGL+ E K+ + M K + P Y
Sbjct: 729 VRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEM-KSRGMRPDDFTYN 787
Query: 479 AVADLLGRAGRLEEAYDFISNM---GIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLV 535
A+ + G ++ + M G+ P S ++ L++ + A +++
Sbjct: 788 ALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELL------ 841
Query: 536 DPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKVHTFLAGDKS 595
+ MG + N + KL H P W NK +LA
Sbjct: 842 --KEMGKRGVSPNTSTYCTMISGLCKLCTH---------PDVEW----NKKAMYLA---- 882
Query: 596 HPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVDDEYKRDLLRTHSERL 645
EA +L E +E++GY+ ++ ++ + + + ++ +ER
Sbjct: 883 --------EAKGLLKEMVEEKGYI-PCNQTIYWISAAFSKPGMKVDAERF 923
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 92/494 (18%), Positives = 197/494 (39%), Gaps = 71/494 (14%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEI-------------- 186
G+ D + N L++ +CKV G F A + DE + +
Sbjct: 191 GILPDTVSYNTLIDGFCKV---GNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAY 247
Query: 187 -DSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
D V FD DVV+++++I + G E ++REM + + P+ T ++++
Sbjct: 248 RDMVMSGFD----PDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDS 303
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLL-------- 297
+ + ++ + G D+ + + L+D K + + + F +L
Sbjct: 304 LFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPN 363
Query: 298 -------------------------------PYRDAISWNSIIAGCVQNGKFDQGIGFFR 326
+ ++++S+I G V+ G ++ + R
Sbjct: 364 VVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLR 423
Query: 327 QMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCG 386
+M V P ++ +VI + +L + +G ++N +I +LV+ + G
Sbjct: 424 KMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIG 483
Query: 387 NIK----MARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFM 442
IK + + + K T D + +T++I G A++ E+M E G+ V++
Sbjct: 484 RIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYN 543
Query: 443 AVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLE---EAYDFISN 499
+++ G V W Y EK I P + + + + + G E + +D + +
Sbjct: 544 VLISGMLKFGKVGADWAYKGMREKG--IEPDIATFNIMMNSQRKQGDSEGILKLWDKMKS 601
Query: 500 MGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDP-ENMGAYVLMSNIYSAAKRWKD 558
GI+P+ + ++ + +E A ++++++L++ N+ Y + + S KR
Sbjct: 602 CGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADA 661
Query: 559 AAKLRIHMRSKGLK 572
K + S G+K
Sbjct: 662 IFKTHETLLSYGIK 675
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 131/297 (44%), Gaps = 29/297 (9%)
Query: 175 NPQRGKGCKCEIDSVRKVFDLMPA----RDVVSWNTVIAGNAQNGMFREALDMVREMGDD 230
N QR +G + + + K++D M + ++S N V+ +NG EA+ ++ +M
Sbjct: 581 NSQRKQG---DSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLM 637
Query: 231 KLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLI------DMYAKC 284
++ P+ T L ++H + H + +G + ++LI M K
Sbjct: 638 EIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKA 697
Query: 285 NRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVI 344
V + A +P D +++NS++ G + + + M++A + P +++++I
Sbjct: 698 AMVMGDMEARGFIP--DTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTII 755
Query: 345 PACAHLTALNLGKQLHGCIIRL---GFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR 401
L+ L K++ + + G + F ++L+ AK GN+K + I+ ++
Sbjct: 756 RG---LSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIAD 812
Query: 402 DMVAWTA----IIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTA----CSH 450
+V T+ +I A G L A L ++M + GV P + +++ C+H
Sbjct: 813 GLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTH 869
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 139/322 (43%), Gaps = 54/322 (16%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G + D+ T N L+ +CK L A+++F ++ + G C + D
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELN---KASEMF-KDVKSGSVC---------------SPD 276
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
VV++ ++I+G + G REA ++ +M + P + T + ++ +A+ +++ EI G
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQ 320
I G DV +SLID Y + G+ Q
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRV-------------------------------GQVSQ 365
Query: 321 GIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVD 380
G + +M + P ++S +I A + L ++L G + F+ + ++D
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVID 425
Query: 381 MYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRP 436
+ K G + A I +++E + D + +T +I+G M G +AVS+F KM+ G P
Sbjct: 426 GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSP 485
Query: 437 CYVAFMAVLTACSHAGLVDEGW 458
+ ++L+ AG+ E +
Sbjct: 486 DKITVSSLLSCLLKAGMAKEAY 507
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 109/273 (39%), Gaps = 13/273 (4%)
Query: 254 KGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPY-----RDAISWNSI 308
K +E+ G G + D+ ++LI + K N + + F + D +++ S+
Sbjct: 224 KALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSM 283
Query: 309 IAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGF 368
I+G + GK + ML+ + P V+F+ ++ A + +++ G +I G
Sbjct: 284 ISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC 343
Query: 369 DDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDM----VAWTAIIMGCAMHGHALDAVS 424
+ +SL+D Y + G + +++++ R M ++ +I L A
Sbjct: 344 FPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARE 403
Query: 425 LFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLL 484
L ++ + P + V+ AG V+E MEK + P + +
Sbjct: 404 LLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKK-KCKPDKITFTILIIGH 462
Query: 485 GRAGRLEEAYDFISNM---GIQPTGSVWSTLLA 514
GR+ EA M G P S+LL+
Sbjct: 463 CMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 139/322 (43%), Gaps = 54/322 (16%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G + D+ T N L+ +CK L A+++F ++ + G C + D
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELN---KASEMF-KDVKSGSVC---------------SPD 276
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
VV++ ++I+G + G REA ++ +M + P + T + ++ +A+ +++ EI G
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFDQ 320
I G DV +SLID Y + G+ Q
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRV-------------------------------GQVSQ 365
Query: 321 GIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVD 380
G + +M + P ++S +I A + L ++L G + F+ + ++D
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVID 425
Query: 381 MYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRP 436
+ K G + A I +++E + D + +T +I+G M G +AVS+F KM+ G P
Sbjct: 426 GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSP 485
Query: 437 CYVAFMAVLTACSHAGLVDEGW 458
+ ++L+ AG+ E +
Sbjct: 486 DKITVSSLLSCLLKAGMAKEAY 507
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 109/273 (39%), Gaps = 13/273 (4%)
Query: 254 KGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPY-----RDAISWNSI 308
K +E+ G G + D+ ++LI + K N + + F + D +++ S+
Sbjct: 224 KALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSM 283
Query: 309 IAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGF 368
I+G + GK + ML+ + P V+F+ ++ A + +++ G +I G
Sbjct: 284 ISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC 343
Query: 369 DDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDM----VAWTAIIMGCAMHGHALDAVS 424
+ +SL+D Y + G + +++++ R M ++ +I L A
Sbjct: 344 FPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARE 403
Query: 425 LFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLL 484
L ++ + P + V+ AG V+E MEK + P + +
Sbjct: 404 LLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKK-KCKPDKITFTILIIGH 462
Query: 485 GRAGRLEEAYDFISNM---GIQPTGSVWSTLLA 514
GR+ EA M G P S+LL+
Sbjct: 463 CMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/411 (19%), Positives = 173/411 (42%), Gaps = 54/411 (13%)
Query: 156 YCKVQNLGGFGSANKVFDENPQRGKGCKC-----EIDSVRKVFDLMPARDVVSWNTVIAG 210
+CK L G A+ ++ N C+C + KV L D ++NT+I G
Sbjct: 110 FCKQLELNGI--AHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKG 167
Query: 211 NAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGD 270
G EA+ +V M ++ +PD T +SI+ D +++ D
Sbjct: 168 LFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227
Query: 271 VFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCVQNGKFDQGIGFFR 326
VF S++ID + ++ ++ F + + +++NS++ G + GK++ G +
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 287
Query: 327 QMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCG 386
M+ ++ P ++F+ ++ L +L+ +I G N ++L+D Y
Sbjct: 288 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 347
Query: 387 NIKMARYIFDKIE----TRDMVAWTAIIMGCAM----------------HGHALDAVS-- 424
+ A + D + + D+V +T++I G M G +AV+
Sbjct: 348 RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYS 407
Query: 425 -----------------LFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKD 467
LF++M+ GV P + + +L G +++ + F ++K
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467
Query: 468 FRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM---GIQPTGSVWSTLLAA 515
++ G+ Y + + + + G++E+A++ ++ G++P ++ +++
Sbjct: 468 -KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 517
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 162/367 (44%), Gaps = 52/367 (14%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEH------VDVV 253
DVV++N+++ G ++G ALD++R+M + +K D FT S+I+ + +
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 254 KGMEIHGY--------AIRHGF-------DG--------------DVFIGSSLIDMYAKC 284
K ME G ++ G DG +V + L+D++ K
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 285 NRVEHSLRAFYLLPYR----DAISWNSIIAG-CVQNGKFDQGIGFFRQMLKAKVKPMQVS 339
+++ + + + R + I++N+++ G C+QN + + M++ K P V+
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN-RLSEANNMLDLMVRNKCSPDIVT 370
Query: 340 FSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIE 399
F+S+I + ++ G ++ I + G N S LV + + G IK+A +F ++
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 400 TR----DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVD 455
+ D++ + ++ G +G A+ +FE + + + V + ++ G V+
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 490
Query: 456 EGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM---GIQPTGSVWSTL 512
+ W F S+ + P + Y + L + G L EA + M G P ++TL
Sbjct: 491 DAWNLFCSLPCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549
Query: 513 LAACRAH 519
+ RAH
Sbjct: 550 I---RAH 553
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 143/332 (43%), Gaps = 16/332 (4%)
Query: 181 GCKCEIDSVRKVFDLMPAR----DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDS 236
GC ID+ +F M + VV++N+++ G + G + + ++++M ++ P+
Sbjct: 242 GC---IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298
Query: 237 FTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYL 296
T + +L +F + + + E++ I G ++ ++L+D Y NR+ + L
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 358
Query: 297 LPYR----DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTA 352
+ D +++ S+I G + D G+ FR + K + V++S ++
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 418
Query: 353 LNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDM----VAWTA 408
+ L ++L ++ G + L+D G ++ A IF+ ++ M V +T
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 409 IIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDF 468
II G G DA +LF + GV+P + + +++ G + E ME+D
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 469 RIAPGLEHYAAVADLLGRAGRLEEAYDFISNM 500
AP Y + R G L + I M
Sbjct: 539 N-APNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 114/263 (43%), Gaps = 9/263 (3%)
Query: 317 KFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIAS 376
K D I F++M++++ P V FS A A NL + G N + +
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 377 SLVDMYAKCGNIKMARYIFDKIET----RDMVAWTAIIMGCAMHGHALDAVSLFEKMLED 432
+++ + +C A + K+ D + +I G + G +AV L ++M+E+
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 433 GVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEE 492
G +P V + +++ +G ME+ + + Y+ + D L R G ++
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER-NVKADVFTYSTIIDSLCRDGCIDA 246
Query: 493 AYDFISNM---GIQPTGSVWSTLL-AACRAHKSVELAEKVVDKILLVDPENMGAYVLMSN 548
A M GI+ + +++L+ C+A K + A + D + N+ + ++ +
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 549 IYSAAKRWKDAAKLRIHMRSKGL 571
++ + ++A +L M ++G+
Sbjct: 307 VFVKEGKLQEANELYKEMITRGI 329
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/436 (21%), Positives = 180/436 (41%), Gaps = 21/436 (4%)
Query: 162 LGGFGSANKVFDENPQRGKGCKC-EIDSVRKVFDLMP-ARDVVSWNTVIAGNAQNGMFRE 219
L G G+ V N CK EI++ V D M + DVV++NT++ +G ++
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 220 ALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLID 279
A++++ M PD T + ++ V M++ G DV + L++
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 280 MYAKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKP 335
K R++ +++ +P + I+ N I+ G++ ML+ P
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 336 MQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYI- 394
V+F+ +I L + + + G N + L ++ C KM R I
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL--LHGFCKEKKMDRAIE 400
Query: 395 -FDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACS 449
+++ +R D+V + ++ G DAV + ++ G P + + V+ +
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 450 HAGLVDEGWKYFNSME-KDFRIAPGLEHYAAVADLLGRAGRLEEAYDF---ISNMGIQPT 505
AG + K + M KD + P Y+++ L R G+++EA F MGI+P
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLK--PDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 518
Query: 506 GSVW-STLLAACRAHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRI 564
+ S +L C++ ++ + +V I N +Y ++ + K+A +L
Sbjct: 519 AVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLN 578
Query: 565 HMRSKGLKKTPACSWI 580
+ +KGL K + +
Sbjct: 579 ELCNKGLMKKSSAEQV 594
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 92/210 (43%), Gaps = 28/210 (13%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G + T N L+N C+ G G A + ++ PQ G C+ +S+
Sbjct: 339 GFSPSVVTFNILINFLCRK---GLLGRAIDILEKMPQHG----CQPNSL----------- 380
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
S+N ++ G + A++ + M PD T +++L + V +EI
Sbjct: 381 --SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILN 438
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHS------LRAFYLLPYRDAISWNSIIAGCVQ 314
G + +++ID AK + + +RA L P D I+++S++ G +
Sbjct: 439 QLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP--DTITYSSLVGGLSR 496
Query: 315 NGKFDQGIGFFRQMLKAKVKPMQVSFSSVI 344
GK D+ I FF + + ++P V+F+S++
Sbjct: 497 EGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 138/294 (46%), Gaps = 12/294 (4%)
Query: 186 IDSVRKVFDLMPAR----DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
+D +F M + +VV+++++I+ G + +A ++ +M + K+ P+ T ++
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD 301
++ F + V+ ++H I+ D D+F +SLI+ + +R++ + + F + +D
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 320
Query: 302 AI----SWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGK 357
++N++I G ++ + + G FR+M + V+++++I H + +
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 380
Query: 358 QLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGC 413
++ ++ G + S L+D G ++ A +FD ++ D+ +T +I G
Sbjct: 381 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 440
Query: 414 AMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKD 467
G D LF + GV+P V + +++ L+ E + M++D
Sbjct: 441 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 494
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/388 (19%), Positives = 165/388 (42%), Gaps = 50/388 (12%)
Query: 197 PARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGM 256
P + +N +++ A+ F + + +M + + +T + ++ F + +
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 257 EIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHS---LRAFYLLPYR-DAISWNSIIAGC 312
+ G ++ G++ + SSL++ Y R+ + + + YR D I++ ++I G
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 313 VQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNK 372
+ K + + +M++ +P V++ V
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVV----------------------------- 156
Query: 373 FIASSLVDMYAKCGNIKMARYIFDKIET----RDMVAWTAIIMGCAMHGHALDAVSLFEK 428
V+ K G+I +A + +K+E D+V + II + H DA++LF++
Sbjct: 157 ------VNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 210
Query: 429 MLEDGVRPCYVAFMAVLTA-CSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRA 487
M G+RP V + ++++ CS+ D + +EK +I P L + A+ D +
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK--KINPNLVTFNALIDAFVKE 268
Query: 488 GRLEEA---YDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDP-ENMGAY 543
G+ EA +D + I P +++L+ H ++ A+++ + ++ D ++ Y
Sbjct: 269 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 328
Query: 544 VLMSNIYSAAKRWKDAAKLRIHMRSKGL 571
+ + +KR +D +L M +GL
Sbjct: 329 NTLIKGFCKSKRVEDGTELFREMSHRGL 356
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/430 (19%), Positives = 166/430 (38%), Gaps = 74/430 (17%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G+ +LYT N L+N +C+ + + + K+ L
Sbjct: 40 GISHNLYTYNILINCFCRRSQIS--------------------LALALLGKMMKLGYEPS 79
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
+V+ ++++ G +A+ +V +M + +PD+ T ++++ H + + +
Sbjct: 80 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 139
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR-------DAISWNSIIAGCV 313
++ G ++ +++ C R + L AF LL D + +N+II
Sbjct: 140 RMVQRGCQPNLVTYGVVVN--GLCKRGDIDL-AFNLLNKMEAAKIEADVVIFNTIIDSLC 196
Query: 314 QNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKF 373
+ D + F++M ++P V++SS+I + QL +I + N
Sbjct: 197 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 256
Query: 374 IASSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFE-- 427
++L+D + K G A + D + R D+ + ++I G MH A +FE
Sbjct: 257 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 316
Query: 428 ----------------------KMLEDGVRPC-----------YVAFMAVLTACSHAGLV 454
K +EDG V + ++ H G
Sbjct: 317 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 376
Query: 455 DEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLE---EAYDFISNMGIQPTGSVWST 511
D K F M D + P + Y+ + D L G+LE E +D++ I+ +++T
Sbjct: 377 DNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 435
Query: 512 LLAA-CRAHK 520
++ C+A K
Sbjct: 436 MIEGMCKAGK 445
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 111/245 (45%), Gaps = 8/245 (3%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
++V++N +I + G F EA + +M + PD FT +S++ F H + K ++
Sbjct: 254 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF 313
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCVQN 315
+ + D+ ++LI + K RVE F + +R D +++ ++I G +
Sbjct: 314 EFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 373
Query: 316 GKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIA 375
G D F+QM+ V P +++S ++ + L ++ + + + +I
Sbjct: 374 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 433
Query: 376 SSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFEKMLE 431
+++++ K G + +F + + ++V + +I G +A +L +KM E
Sbjct: 434 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 493
Query: 432 DGVRP 436
DG P
Sbjct: 494 DGPLP 498
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 133/276 (48%), Gaps = 8/276 (2%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
+V++++++I+ + +A ++ +M + K+ P+ T ++++ F + +V+ +++
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD----AISWNSIIAGCVQN 315
I+ D D+F SSLI+ + +R++ + F L+ +D +++N++I G +
Sbjct: 354 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKA 413
Query: 316 GKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIA 375
+ D+G+ FR+M + + V+++++I + + + ++ G N
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY 473
Query: 376 SSLVDMYAKCGNIKMARYIFDKIETRDM----VAWTAIIMGCAMHGHALDAVSLFEKMLE 431
++L+D K G ++ A +F+ ++ M + +I G G D LF +
Sbjct: 474 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 533
Query: 432 DGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKD 467
GV+P + + +++ GL +E F M +D
Sbjct: 534 KGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRED 569
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/429 (18%), Positives = 175/429 (40%), Gaps = 72/429 (16%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G+ +LYT N L+N +C+ + + + K+ L
Sbjct: 115 GISHNLYTYNILINCFCRRSQIS--------------------LALALLGKMMKLGYEPS 154
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
+V+ ++++ G +A+ +V +M + +PD+ T ++++ H + + +
Sbjct: 155 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 214
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDA-------ISWNSIIAGCV 313
++ G ++ +++ C R + L AF LL +A + ++++I
Sbjct: 215 RMVQRGCQPNLVTYGVVVN--GLCKRGDIDL-AFNLLNKMEAAKIEANVVIYSTVIDSLC 271
Query: 314 QNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKF 373
+ D + F +M V+P +++SS+I + + +L +I + N
Sbjct: 272 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVV 331
Query: 374 IASSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFEKM 429
++L+D + K G + A ++D++ R D+ ++++I G MH +A +FE M
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 391
Query: 430 LEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKD---------------------- 467
+ P V + ++ A +DEG + F M +
Sbjct: 392 ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC 451
Query: 468 ------FR------IAPGLEHYAAVADLLGRAGRLEEA---YDFISNMGIQPTGSVWSTL 512
F+ + P + Y + D L + G+LE+A ++++ ++PT ++ +
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Query: 513 LAA-CRAHK 520
+ C+A K
Sbjct: 512 IEGMCKAGK 520
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/388 (19%), Positives = 165/388 (42%), Gaps = 50/388 (12%)
Query: 197 PARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGM 256
P + +N +++ A+ F + + +M + + +T + ++ F + +
Sbjct: 81 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 140
Query: 257 EIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLR---AFYLLPYR-DAISWNSIIAGC 312
+ G ++ G++ + SSL++ Y R+ ++ + YR D I++ ++I G
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 313 VQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNK 372
+ K + + +M++ +P V++ V
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVV----------------------------- 231
Query: 373 FIASSLVDMYAKCGNIKMARYIFDKIET----RDMVAWTAIIMGCAMHGHALDAVSLFEK 428
V+ K G+I +A + +K+E ++V ++ +I + H DA++LF +
Sbjct: 232 ------VNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 285
Query: 429 MLEDGVRPCYVAFMAVLTA-CSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRA 487
M GVRP + + ++++ C++ D + +E+ +I P + + A+ D +
Sbjct: 286 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER--KINPNVVTFNALIDAFVKE 343
Query: 488 GRLEEA---YDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDP-ENMGAY 543
G+L EA YD + I P +S+L+ H ++ A+ + + ++ D N+ Y
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403
Query: 544 VLMSNIYSAAKRWKDAAKLRIHMRSKGL 571
+ N + AKR + +L M +GL
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGL 431
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/398 (19%), Positives = 176/398 (44%), Gaps = 32/398 (8%)
Query: 146 LYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWN 205
+ T N +++ YCK G F +A ++ D +G +D+ DV ++N
Sbjct: 268 IVTYNTVLHWYCKK---GRFKAAIELLDHMKSKG------VDA-----------DVCTYN 307
Query: 206 TVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRH 265
+I ++ + ++R+M + P+ T ++++ F+ V+ ++ +
Sbjct: 308 MLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSF 367
Query: 266 GFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCVQNGKFDQG 321
G + ++LID + + +L+ FY++ + +S+ ++ G +N +FD
Sbjct: 368 GLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLA 427
Query: 322 IGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDM 381
GF+ +M + V +++++ +I L+ L + + G D + S+L++
Sbjct: 428 RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 487
Query: 382 YAKCGNIKMARYIFDKIE----TRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPC 437
+ K G K A+ I +I + + + ++ +I C G +A+ ++E M+ +G
Sbjct: 488 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 547
Query: 438 YVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEA---Y 494
+ F ++T+ AG V E ++ M D I P + + + G +G +A +
Sbjct: 548 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSD-GILPNTVSFDCLINGYGNSGEGLKAFSVF 606
Query: 495 DFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKI 532
D ++ +G PT + +LL + AEK + +
Sbjct: 607 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 644
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/361 (19%), Positives = 158/361 (43%), Gaps = 14/361 (3%)
Query: 185 EIDSVRKVFDLMPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILP 244
EI + ++ P+ V + N ++ ++G ++EM K+ PD T + ++
Sbjct: 184 EIFRLMGLYGFNPS--VYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILIN 241
Query: 245 IFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR---- 300
+ K + + G+ + ++++ Y K R + ++ + +
Sbjct: 242 VLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDA 301
Query: 301 DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLH 360
D ++N +I ++ + +G R M K + P +V+++++I ++ + + QL
Sbjct: 302 DVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLL 361
Query: 361 GCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDM----VAWTAIIMGCAMH 416
++ G N ++L+D + GN K A +F +E + + V++ ++ G +
Sbjct: 362 NEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKN 421
Query: 417 GHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEH 476
A + +M +GV + + ++ G +DE N M KD I P +
Sbjct: 422 AEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKD-GIDPDIVT 480
Query: 477 YAAVADLLGRAGRLEEAYDF---ISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKIL 533
Y+A+ + + GR + A + I +G+ P G ++STL+ C ++ A ++ + ++
Sbjct: 481 YSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI 540
Query: 534 L 534
L
Sbjct: 541 L 541
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 165/425 (38%), Gaps = 61/425 (14%)
Query: 182 CK-CEIDSVRKVFDLMPARDV----VSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDS 236
CK E D R + M V +++ +I G +NG EA+ ++ EM D + PD
Sbjct: 419 CKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDI 478
Query: 237 FTLSSILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYL 296
T S+++ F + EI R G + I S+LI + ++ ++R +
Sbjct: 479 VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEA 538
Query: 297 LPY----RDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAH--- 349
+ RD ++N ++ + GK + F R M + P VSF +I +
Sbjct: 539 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 598
Query: 350 -LTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR----DMV 404
L A ++ ++ ++G F SL+ K G+++ A + D V
Sbjct: 599 GLKAFSVFDEM----TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTV 654
Query: 405 AWTAIIMGCAMHGHALDAVSLFEKMLEDGVRP---CYVAFMA------------------ 443
+ ++ G+ AVSLF +M++ + P Y + ++
Sbjct: 655 MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEA 714
Query: 444 ----------VLTACSHAGLVDEG-WK---YFNSMEKDFRIAPGLEHYAAVADLLGRAGR 489
V+ C G+ G WK YF + P + A+ D R G+
Sbjct: 715 EARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGK 774
Query: 490 LEEAYDFISNMGIQ---PTGSVWSTLLAACRAHKSVELAEKVVDKILL--VDPENMGAYV 544
+E+ D + MG Q P + ++ LL K V + + I+L + P+ + +
Sbjct: 775 IEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHS 834
Query: 545 LMSNI 549
L+ I
Sbjct: 835 LVLGI 839
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 134/320 (41%), Gaps = 38/320 (11%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKG-------------CK--CE 185
G+D D+ T +AL+N +CKV G F +A ++ + G C+ C
Sbjct: 473 GIDPDIVTYSALINGFCKV---GRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 529
Query: 186 IDSVRKVFDLMP----ARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
+++R +++ M RD ++N ++ + G EA + +R M D + P++ +
Sbjct: 530 KEAIR-IYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 588
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAK---CNRVEHSLRAFYLLP 298
++ + + +K + + G F SL+ K E L++ + +P
Sbjct: 589 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 648
Query: 299 YR-DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAH----LTAL 353
D + +N+++ ++G + + F +M++ + P +++S+I + A+
Sbjct: 649 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 708
Query: 354 NLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIE----TRDMVAWTAI 409
K+ R NK + + VD K G K Y ++++ T D+V A+
Sbjct: 709 LFAKEAEA---RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 765
Query: 410 IMGCAMHGHALDAVSLFEKM 429
I G + G L +M
Sbjct: 766 IDGYSRMGKIEKTNDLLPEM 785
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/340 (19%), Positives = 140/340 (41%), Gaps = 39/340 (11%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
D+V+ N +I G ++ G + D++ EMG+ P+ T + +L H
Sbjct: 758 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL---------------H 802
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRDAISWNSIIAGCVQNGKFD 319
GY+ R + S+I L +LP D ++ +S++ G ++ +
Sbjct: 803 GYSKRKDVSTSFLLYRSII------------LNG--ILP--DKLTCHSLVLGICESNMLE 846
Query: 320 QGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLV 379
G+ + + V+ + +F+ +I C +N L + LG +K ++V
Sbjct: 847 IGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMV 906
Query: 380 DMYAKCGNIKMARYIFDKIETRDMVA----WTAIIMGCAMHGHALDAVSLFEKMLEDGVR 435
+ + + +R + ++ + + + +I G G A + E+M+ +
Sbjct: 907 SVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKIC 966
Query: 436 PCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYD 495
P VA A++ A + G DE M K ++ P + + + L + G + EA +
Sbjct: 967 PPNVAESAMVRALAKCGKADEATLLLRFMLK-MKLVPTIASFTTLMHLCCKNGNVIEALE 1025
Query: 496 F---ISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKI 532
+SN G++ ++ L+ A + LA ++ +++
Sbjct: 1026 LRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1065
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/461 (19%), Positives = 191/461 (41%), Gaps = 40/461 (8%)
Query: 105 LGISPTRHFFPSLLKASTXXXXXXXXXXXXXXXXXXGLDFDLYTANALMNMYCKVQNLG- 163
G+ P HF+ +L G+ D+ T N L+ C+ L
Sbjct: 148 FGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRP 207
Query: 164 -----------GFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMP----ARDVVSWNTVI 208
G K F Q G + ++D ++ + M + VS N ++
Sbjct: 208 AILMLEDMPSYGLVPDEKTFTTVMQ-GYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 266
Query: 209 AGNAQNGMFREALDMVREMGD-DKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRHGF 267
G + G +AL+ ++EM + D PD +T ++++ + V +EI ++ G+
Sbjct: 267 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326
Query: 268 DGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD----AISWNSIIAGCVQNGKFDQGIG 323
D DV+ +S+I K V+ ++ + RD +++N++I+ + + ++
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 324 FFRQMLKAKVKPMQVSFSSVIPACA----HLTALNLGKQLHGCIIRLGFDDNKFIASSLV 379
R + + P +F+S+I H A+ L +++ G + ++F + L+
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS----KGCEPDEFTYNMLI 442
Query: 380 DMYAKCGNIKMARYIFDKIE----TRDMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVR 435
D G + A + ++E R ++ + +I G +A +F++M GV
Sbjct: 443 DSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVS 502
Query: 436 PCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYD 495
V + ++ + V++ + + M + + P Y ++ R G +++A D
Sbjct: 503 RNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ-KPDKYTYNSLLTHFCRGGDIKKAAD 561
Query: 496 FISNM---GIQPTGSVWSTLLAA-CRAHKSVELAEKVVDKI 532
+ M G +P + TL++ C+A + VE+A K++ I
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGR-VEVASKLLRSI 601
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 150/342 (43%), Gaps = 25/342 (7%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
D ++NT++ G + G + A++++ M + PD +T +S++ + +V + +E+
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVL 353
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCVQN 315
I + ++LI K N+VE + +L + D ++NS+I G
Sbjct: 354 DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 413
Query: 316 GKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHL----TALNLGKQ--LHGCIIRLGFD 369
+ F +M +P + +++ +I + ALN+ KQ L GC +
Sbjct: 414 RNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV--- 470
Query: 370 DNKFIASSLVDMYAKCGNIKMARYIFDKIE----TRDMVAWTAIIMGCAMHGHALDAVSL 425
++L+D + K + A IFD++E +R+ V + +I G DA L
Sbjct: 471 ---ITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 426 FEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLG 485
++M+ +G +P + ++LT G + + +M + P + Y + L
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN-GCEPDIVTYGTLISGLC 586
Query: 486 RAGRLEEAYDFISNM---GIQPTGSVWSTLLAAC-RAHKSVE 523
+AGR+E A + ++ GI T ++ ++ R K+ E
Sbjct: 587 KAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTE 628
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 155/365 (42%), Gaps = 48/365 (13%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCK-----------CEIDSV 189
G D D+YT N++++ CK LG A +V D+ R C+ + V
Sbjct: 325 GYDPDVYTYNSVISGLCK---LGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQV 381
Query: 190 RKVFDL---------MPARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLS 240
+ +L +P DV ++N++I G R A+++ EM +PD FT +
Sbjct: 382 EEATELARVLTSKGILP--DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYN 439
Query: 241 SILPIFA------EHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAF 294
++ E ++++K ME+ G A V ++LID + K N+ + F
Sbjct: 440 MLIDSLCSKGKLDEALNMLKQMELSGCA------RSVITYNTLIDGFCKANKTREAEEIF 493
Query: 295 YLLPY----RDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHL 350
+ R+++++N++I G ++ + + QM+ KP + +++S++
Sbjct: 494 DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRG 553
Query: 351 TALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETRDMV----AW 406
+ + + G + + +L+ K G +++A + I+ + + A+
Sbjct: 554 GDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAY 613
Query: 407 TAIIMGCAMHGHALDAVSLFEKMLEDG-VRPCYVAFMAVLTA-CSHAGLVDEGWKYF-NS 463
+I G +A++LF +MLE P V++ V C+ G + E +
Sbjct: 614 NPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVEL 673
Query: 464 MEKDF 468
+EK F
Sbjct: 674 LEKGF 678
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 146/328 (44%), Gaps = 18/328 (5%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
++V +N +I G + EA+ + +++ LKPD T +++ + + G+E+
Sbjct: 261 NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM 320
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRA------FYLLPYRDAISWNSIIAGCV 313
+ F SSL++ K ++E +L F + P + +N++I
Sbjct: 321 DEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSP--NLFVYNALIDSLC 378
Query: 314 QNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKF 373
+ KF + F +M K ++P V++S +I L+ G ++ G + +
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438
Query: 374 IASSLVDMYAKCGNIK-----MARYIFDKIETRDMVAWTAIIMGCAMHGHALDAVSLFEK 428
+SL++ + K G+I MA I K+E +V +T+++ G G A+ L+ +
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEP-TVVTYTSLMGGYCSKGKINKALRLYHE 497
Query: 429 MLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAG 488
M G+ P F +L+ AGL+ + K FN M ++ + P Y + + G
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM-AEWNVKPNRVTYNVMIEGYCEEG 556
Query: 489 RLEEAYDFISNM---GIQPTGSVWSTLL 513
+ +A++F+ M GI P + L+
Sbjct: 557 DMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 200/474 (42%), Gaps = 60/474 (12%)
Query: 141 GLDFDLYTANALMNMYCKVQNLG---GFGSA--NK-----VFDENPQRGKGC-KCEIDSV 189
GL +Y N+L+N +CK ++ GF + NK V G C K +I+
Sbjct: 432 GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKA 491
Query: 190 RKVFDLMPARDVV----SWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPI 245
+++ M + + ++ T+++G + G+ R+A+ + EM + +KP+ T + ++
Sbjct: 492 LRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEG 551
Query: 246 FAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----- 300
+ E D+ K E G D + LI + C + S ++
Sbjct: 552 YCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI--HGLCLTGQASEAKVFVDGLHKGNCE 609
Query: 301 -DAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACA----HLTALNL 355
+ I + ++ G + GK ++ + ++M++ V V + +I L
Sbjct: 610 LNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGL 669
Query: 356 GKQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIM 411
K++H G + I +S++D +K G+ K A I+D + + V +TA+I
Sbjct: 670 LKEMHD----RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725
Query: 412 GCAMHGHALDAVSLFEKMLEDGVRP---CYVAFMAVLTACSHAGLVDEGWKYFNSMEKDF 468
G G +A L KM P Y F+ +LT G VD ++E
Sbjct: 726 GLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILT----KGEVDMQ----KAVELHN 777
Query: 469 RIAPGLEHYAAVADLL----GRAGRLEEAYDFISNM---GIQPTGSVWSTLL-AACR--- 517
I GL A ++L R GR+EEA + I+ M G+ P ++T++ CR
Sbjct: 778 AILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRND 837
Query: 518 AHKSVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGL 571
K++EL + +K + P+ + L+ A + K A +LR M +GL
Sbjct: 838 VKKAIELWNSMTEKG--IRPDRVAYNTLIHGCCVAGEMGK-ATELRNEMLRQGL 888
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/294 (19%), Positives = 139/294 (47%), Gaps = 12/294 (4%)
Query: 186 IDSVRKVFDLMPAR----DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSS 241
+D +F M + +VV+++++I+ G + +A ++ +M + K+ P+ T ++
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 242 ILPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLP--- 298
++ F + V+ +++ I+ D D+F +SL++ + +R++ + + F +
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 299 -YRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGK 357
+ D +++N++I G ++ + + G FR+M + V+++++I H + +
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455
Query: 358 QLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGC 413
++ ++ G + S L+D G ++ A +FD ++ D+ +T +I G
Sbjct: 456 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 515
Query: 414 AMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKD 467
G D LF + GV+P V + +++ L+ E + M++D
Sbjct: 516 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 569
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/389 (19%), Positives = 166/389 (42%), Gaps = 52/389 (13%)
Query: 197 PARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGM 256
P +V +N +++ A+ F + + +M ++ +T + ++ F + +
Sbjct: 81 PLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLAL 140
Query: 257 EIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLR---AFYLLPYR-DAISWNSIIAGC 312
+ G ++ G++ + SSL++ Y R+ ++ + YR D I++ ++I G
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 313 VQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNK 372
+ K + + +M++ +P V++ V
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVV----------------------------- 231
Query: 373 FIASSLVDMYAKCGNIKMARYIFDKIET----RDMVAWTAIIMGCAMHGHALDAVSLFEK 428
V+ K G+ +A + +K+E D+V + II + H DA++LF++
Sbjct: 232 ------VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 285
Query: 429 MLEDGVRPCYVAFMAVLTA-CSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRA 487
M G+RP V + ++++ CS+ D + +EK +I P L + A+ D +
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK--KINPNLVTFNALIDAFVKE 343
Query: 488 GRLEEA---YDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVD--PENMGA 542
G+ EA YD + I P +++L+ H ++ A+++ + ++ D P+ +
Sbjct: 344 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 403
Query: 543 YVLMSNIYSAAKRWKDAAKLRIHMRSKGL 571
L+ + +KR +D +L M +GL
Sbjct: 404 NTLIKG-FCKSKRVEDGTELFREMSHRGL 431
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 111/245 (45%), Gaps = 8/245 (3%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
++V++N +I + G F EA + +M + PD FT +S++ F H + K ++
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCVQN 315
+ + DV ++LI + K RVE F + +R D +++ ++I G +
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 448
Query: 316 GKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIA 375
G D F+QM+ V P +++S ++ + L ++ + + + +I
Sbjct: 449 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 508
Query: 376 SSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFEKMLE 431
+++++ K G + +F + + ++V + +I G +A +L +KM E
Sbjct: 509 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Query: 432 DGVRP 436
DG P
Sbjct: 569 DGPLP 573
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/398 (18%), Positives = 158/398 (39%), Gaps = 36/398 (9%)
Query: 146 LYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARDVVSWN 205
LYT N L+N +C+ + + + K+ L +V+ +
Sbjct: 120 LYTYNILINCFCRRSQIS--------------------LALALLGKMMKLGYEPSIVTLS 159
Query: 206 TVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYAIRH 265
+++ G +A+ +V +M + +PD+ T ++++ H + + + ++
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 219
Query: 266 GFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR-------DAISWNSIIAGCVQNGKF 318
G ++ +++ C R + L A LL D + +N+II +
Sbjct: 220 GCQPNLVTYGVVVN--GLCKRGDTDL-ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 276
Query: 319 DQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSL 378
D + F++M ++P V++SS+I + QL +I + N ++L
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Query: 379 VDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGV 434
+D + K G A ++D + R D+ + +++ G MH A +FE M+
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 435 RPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLL--GRAGRLEE 492
P V + ++ + V++G + F M + + + + L G ++
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456
Query: 493 AYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVD 530
+ + + G+ P +S LL + +E A +V D
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 494
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 143/309 (46%), Gaps = 9/309 (2%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
DV +++++I+ G + +A ++ +M + K+ P+ T S+++ F + +V+ +++
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD----AISWNSIIAGCVQN 315
I+ D D+F SSLI+ + +R++ + F L+ +D ++++++I G +
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 316 GKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIA 375
+ ++G+ FR+M + + V+++++I + + + ++ +G N
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 376 SSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFEKMLE 431
+ L+D K G + A +F+ ++ D+ + +I G G D LF +
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531
Query: 432 DGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLE 491
GV P +A+ +++ G +E M++D + P Y + R G E
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL-PNSGTYNTLIRARLRDGDRE 590
Query: 492 EAYDFISNM 500
+ + I M
Sbjct: 591 ASAELIKEM 599
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 143/334 (42%), Gaps = 28/334 (8%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G+ DLYT + +N +C+ L + + K+ L D
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLS--------------------LALAVLAKMMKLGYEPD 152
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
+V+ ++++ G + +A+ +V +M + KPD+FT ++++ H + + +
Sbjct: 153 IVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVD 212
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLP----YRDAISWNSIIAGCVQNG 316
++ G D+ ++++ K ++ +L + D + +N+II G +
Sbjct: 213 QMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYK 272
Query: 317 KFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIAS 376
D + F +M ++P ++SS+I + + +L +I + N S
Sbjct: 273 HMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFS 332
Query: 377 SLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFEKMLED 432
+L+D + K G + A ++D++ R D+ ++++I G MH +A +FE M+
Sbjct: 333 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 392
Query: 433 GVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEK 466
P V + ++ A V+EG + F M +
Sbjct: 393 DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQ 426
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/387 (19%), Positives = 163/387 (42%), Gaps = 48/387 (12%)
Query: 197 PARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGM 256
P +V +N +++ A+ F + + +M + D +T S + F + +
Sbjct: 79 PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLAL 138
Query: 257 EIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLR---AFYLLPYR-DAISWNSIIAGC 312
+ ++ G++ D+ SSL++ Y R+ ++ + Y+ D ++ ++I G
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 313 VQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNK 372
+ K + + QM++ +P V++ +V
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTV----------------------------- 229
Query: 373 FIASSLVDMYAKCGNIKMARYIFDKIE----TRDMVAWTAIIMGCAMHGHALDAVSLFEK 428
V+ K G+I +A + K+E D+V + II G + H DA++LF +
Sbjct: 230 ------VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTE 283
Query: 429 MLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAG 488
M G+RP + ++++ + G + + + M + +I P + ++A+ D + G
Sbjct: 284 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEG 342
Query: 489 RL---EEAYDFISNMGIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDP-ENMGAYV 544
+L E+ YD + I P +S+L+ H ++ A+ + + ++ D N+ Y
Sbjct: 343 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYS 402
Query: 545 LMSNIYSAAKRWKDAAKLRIHMRSKGL 571
+ + AKR ++ +L M +GL
Sbjct: 403 TLIKGFCKAKRVEEGMELFREMSQRGL 429
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 104/482 (21%), Positives = 197/482 (40%), Gaps = 74/482 (15%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G+ D+Y +N +CK G A K+F + + G A +
Sbjct: 255 GVSPDVYLFTTAINAFCKG---GKVEEAVKLFSKMEEAG-----------------VAPN 294
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
VV++NTVI G G + EA +M + ++P T S ++ + +
Sbjct: 295 VVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLK 354
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCVQNG 316
+ GF +V + ++LID + + + ++ L+ + + ++N++I G +NG
Sbjct: 355 EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNG 414
Query: 317 KFDQGIGFFRQMLKAKVKPMQVSFSSVI-------------------------PACAHLT 351
+ D ++ML Q SF+SVI P LT
Sbjct: 415 QADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT 474
Query: 352 ALNLGKQLHG----------CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR 401
L G HG + GF + +++L+ + G + A I +I R
Sbjct: 475 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 534
Query: 402 ----DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG 457
D V++ +I GC +A ++M++ G++P + ++ + V+E
Sbjct: 535 GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 594
Query: 458 WKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM---GIQPTGSVWSTLLA 514
++++ +++ + P + Y+ + D +A R EE +F M +QP V++ L+
Sbjct: 595 IQFWDDCKRN-GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 515 A-CRAHK---SVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKG 570
A CR+ + ++EL E + K + P N Y + S R ++A L MR +G
Sbjct: 654 AYCRSGRLSMALELREDMKHKG--ISP-NSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 571 LK 572
L+
Sbjct: 711 LE 712
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 138/327 (42%), Gaps = 28/327 (8%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G D T+NAL++ C+ G A ++ E G+GC D
Sbjct: 500 GFVVDTRTSNALLHGLCEA---GKLDEAFRIQKE--ILGRGC---------------VMD 539
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
VS+NT+I+G EA + EM LKPD++T S ++ V + ++
Sbjct: 540 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 599
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCVQNG 316
R+G DV+ S +ID K R E F + + + + +N +I ++G
Sbjct: 600 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659
Query: 317 KFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIAS 376
+ + M + P +++S+I + ++ + K L + G + N F +
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 719
Query: 377 SLVDMYAKCGNIKMARYIFDKIETRDM----VAWTAIIMGCAMHGHALDAVSLFEKMLED 432
+L+D Y K G + + ++ ++++ + +T +I G A G+ +A L +M E
Sbjct: 720 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 779
Query: 433 GVRPCYVAFMAVLTACSHAGLVDEGWK 459
G+ P + + + G V E +K
Sbjct: 780 GIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 147/341 (43%), Gaps = 12/341 (3%)
Query: 203 SWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYA 262
S+ +VI + MF AL V EM + P L++++ +H K +E+
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496
Query: 263 IRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCVQNGKF 318
+ GF D ++L+ + +++ + R + R D +S+N++I+GC K
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 319 DQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSL 378
D+ F +M+K +KP ++S +I ++ + Q R G + + S +
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 379 VDMYAKCGNIKMARYIFDKIETRDM----VAWTAIIMGCAMHGHALDAVSLFEKMLEDGV 434
+D K + + FD++ ++++ V + +I G A+ L E M G+
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 435 RPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAY 494
P + +++ S V+E F M + + P + HY A+ D G+ G++ +
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 495 DFISNM---GIQPTGSVWSTLLAACRAHKSVELAEKVVDKI 532
+ M + P ++ ++ +V A ++++++
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 104/482 (21%), Positives = 197/482 (40%), Gaps = 74/482 (15%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G+ D+Y +N +CK G A K+F + + G A +
Sbjct: 255 GVSPDVYLFTTAINAFCKG---GKVEEAVKLFSKMEEAG-----------------VAPN 294
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
VV++NTVI G G + EA +M + ++P T S ++ + +
Sbjct: 295 VVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLK 354
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCVQNG 316
+ GF +V + ++LID + + + ++ L+ + + ++N++I G +NG
Sbjct: 355 EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNG 414
Query: 317 KFDQGIGFFRQMLKAKVKPMQVSFSSVI-------------------------PACAHLT 351
+ D ++ML Q SF+SVI P LT
Sbjct: 415 QADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT 474
Query: 352 ALNLGKQLHG----------CIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR 401
L G HG + GF + +++L+ + G + A I +I R
Sbjct: 475 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 534
Query: 402 ----DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG 457
D V++ +I GC +A ++M++ G++P + ++ + V+E
Sbjct: 535 GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 594
Query: 458 WKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM---GIQPTGSVWSTLLA 514
++++ +++ + P + Y+ + D +A R EE +F M +QP V++ L+
Sbjct: 595 IQFWDDCKRN-GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 515 A-CRAHK---SVELAEKVVDKILLVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKG 570
A CR+ + ++EL E + K + P N Y + S R ++A L MR +G
Sbjct: 654 AYCRSGRLSMALELREDMKHKG--ISP-NSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 571 LK 572
L+
Sbjct: 711 LE 712
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 138/327 (42%), Gaps = 28/327 (8%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G D T+NAL++ C+ G A ++ E G+GC D
Sbjct: 500 GFVVDTRTSNALLHGLCEA---GKLDEAFRIQKE--ILGRGC---------------VMD 539
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
VS+NT+I+G EA + EM LKPD++T S ++ V + ++
Sbjct: 540 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 599
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCVQNG 316
R+G DV+ S +ID K R E F + + + + +N +I ++G
Sbjct: 600 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659
Query: 317 KFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIAS 376
+ + M + P +++S+I + ++ + K L + G + N F +
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 719
Query: 377 SLVDMYAKCGNIKMARYIFDKIETRDM----VAWTAIIMGCAMHGHALDAVSLFEKMLED 432
+L+D Y K G + + ++ ++++ + +T +I G A G+ +A L +M E
Sbjct: 720 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 779
Query: 433 GVRPCYVAFMAVLTACSHAGLVDEGWK 459
G+ P + + + G V E +K
Sbjct: 780 GIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 147/341 (43%), Gaps = 12/341 (3%)
Query: 203 SWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYA 262
S+ +VI + MF AL V EM + P L++++ +H K +E+
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496
Query: 263 IRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCVQNGKF 318
+ GF D ++L+ + +++ + R + R D +S+N++I+GC K
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 319 DQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSL 378
D+ F +M+K +KP ++S +I ++ + Q R G + + S +
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 379 VDMYAKCGNIKMARYIFDKIETRDM----VAWTAIIMGCAMHGHALDAVSLFEKMLEDGV 434
+D K + + FD++ ++++ V + +I G A+ L E M G+
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 435 RPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAY 494
P + +++ S V+E F M + + P + HY A+ D G+ G++ +
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 495 DFISNM---GIQPTGSVWSTLLAACRAHKSVELAEKVVDKI 532
+ M + P ++ ++ +V A ++++++
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 134/276 (48%), Gaps = 8/276 (2%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
DV +++++I+ G + +A ++ +M + K+ P+ T +S++ FA+ +++ ++
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNSIIAGCVQN 315
I+ D ++ +SLI+ + +R++ + + F L+ + D +++N++I G +
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 316 GKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIA 375
K G+ FR M + + V+++++I + + + + ++ G N
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 376 SSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFEKMLE 431
++L+D K G ++ A +F+ ++ D+ + + G G D LF +
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513
Query: 432 DGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKD 467
GV+P +A+ +++ GL +E + F M++D
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 90/447 (20%), Positives = 181/447 (40%), Gaps = 39/447 (8%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRGKGCKCEIDSVRKVFDLMPARD 200
G+ +LYT N ++N C+ L F A + K+ L
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLS-FALA-------------------ILGKMMKLGYGPS 134
Query: 201 VVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHG 260
+V+ N+++ G EA+ +V +M + +PD+ T ++++ +H + + +
Sbjct: 135 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE 194
Query: 261 YAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR-------DAISWNSIIAGCV 313
+ G D+ ++I+ C R E L A LL D + ++++I
Sbjct: 195 RMVVKGCQPDLVTYGAVIN--GLCKRGEPDL-ALNLLNKMEKGKIEADVVIYSTVIDSLC 251
Query: 314 QNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKF 373
+ D + F +M ++P ++SS+I + + +L ++ + N
Sbjct: 252 KYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVV 311
Query: 374 IASSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFEKM 429
+SL+D +AK G + A +FD++ R ++V + ++I G MH +A +F M
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 430 LEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGR 489
+ P V + ++ A V +G + F M + + + + + +A
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF-QASD 430
Query: 490 LEEAYDFISNM---GIQPTGSVWSTLLAACRAHKSVELAEKVVDKILLVDPE-NMGAYVL 545
+ A M G+ P ++TLL + +E A V + + E ++ Y +
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 546 MSNIYSAAKRWKDAAKLRIHMRSKGLK 572
MS A + +D L + KG+K
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVK 517
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 104/224 (46%), Gaps = 8/224 (3%)
Query: 298 PYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGK 357
P+ + ++ +++ + KFD I F +M V +++ +I + L+
Sbjct: 61 PFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFAL 120
Query: 358 QLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKI----ETRDMVAWTAIIMGC 413
+ G +++LG+ + +SL++ + I A + D++ D V +T ++ G
Sbjct: 121 AILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGL 180
Query: 414 AMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPG 473
H A +AV+L E+M+ G +P V + AV+ G D N MEK +I
Sbjct: 181 FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG-KIEAD 239
Query: 474 LEHYAAVADLLGRAGRLEEAYDFISNM---GIQPTGSVWSTLLA 514
+ Y+ V D L + +++A + + M GI+P +S+L++
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 116/259 (44%), Gaps = 13/259 (5%)
Query: 270 DVFIGSSLIDMYAKCNRVEHSLRAFYLL----PYRDAISWNSIIAGCVQNGK-FDQGIGF 324
DV ++++ Y++ + E ++ F + P +++N I+ + G+ + + +G
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 325 FRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFDDNKFIASSLVDMYAK 384
+M +K + + S+V+ ACA L K+ + G++ ++L+ ++ K
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 385 CGNIKMARYIFDKIETR----DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVA 440
G A + ++E D V + ++ G + +A + E M + GV P +
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 441 FMAVLTACSHAGLVDEGWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM 500
+ V+ A AG DE K F SM K+ P Y AV LLG+ R E + +M
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSM-KEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 501 ---GIQPTGSVWSTLLAAC 516
G P + W+T+LA C
Sbjct: 448 KSNGCSPNRATWNTMLALC 466
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 136/344 (39%), Gaps = 50/344 (14%)
Query: 203 SWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIHGYA 262
+WNT++A GM + + REM +PD T ++++ + V +++G
Sbjct: 458 TWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEM 517
Query: 263 IRHGFD----------------GDVFIGSSLI-DMYAKCNRVEHSLRAFYLLPYRDAISW 305
R GF+ GD G ++I DM +K + + + L Y ++
Sbjct: 518 TRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNY 577
Query: 306 NSI--IAGCVQNGKFDQGIGFFRQMLKAKV--------------------KPMQVSFSSV 343
I I ++ G+ R +L A KP V F+S+
Sbjct: 578 LGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSM 637
Query: 344 IPACAHLTALNLGKQLHGCIIRL---GFDDNKFIASSLVDMYAKCGNIKMARYIFDKIET 400
+ + T N+ Q G + + G + +SL+DMY + G A I +E
Sbjct: 638 L---SIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEK 694
Query: 401 R----DMVAWTAIIMGCAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDE 456
D+V++ +I G G +AV + +M E G+RPC + ++ + G+ E
Sbjct: 695 SQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAE 754
Query: 457 GWKYFNSMEKDFRIAPGLEHYAAVADLLGRAGRLEEAYDFISNM 500
M K+ P + V D RAG+ EA DF+S +
Sbjct: 755 IEDVIECMAKN-DCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 147/354 (41%), Gaps = 43/354 (12%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFA------EHVDVV 253
D + +TV++ A+ G+ REA + E+ +P + T +++L +F E + V+
Sbjct: 280 DEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVL 339
Query: 254 KGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYR----DAISWNSII 309
K ME + D + L+ Y + + + ++ + +AI++ ++I
Sbjct: 340 KEME------ENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVI 393
Query: 310 AGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLGKQLHGCIIRLGFD 369
+ GK D+ + F M +A P ++++V+ + N ++ + G
Sbjct: 394 DAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCS 453
Query: 370 DNKFIASSLVDMYAKCGNIKMARY---IFDKIET----RDMVAWTAIIMGCAMHGHALDA 422
N+ ++ M A CGN M ++ +F ++++ D + +I G +DA
Sbjct: 454 PNR---ATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDA 510
Query: 423 VSLFEKMLEDGVRPCYVAFMAVLTACSHAG--------LVDEGWKYFNSMEKDFRIAPGL 474
++ +M G C + A+L A + G + D K F E + + L
Sbjct: 511 SKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLM--L 568
Query: 475 EHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWSTLLAA---CRAHKSVELA 525
+ YA + LG +E + I I P+ + TLL A CRA E A
Sbjct: 569 QCYAKGGNYLG----IERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERA 618
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 112/524 (21%), Positives = 215/524 (41%), Gaps = 53/524 (10%)
Query: 141 GLDFDLYTANALMNMYCKVQNLGGFGSANKVFDENPQRG------------KGC--KCEI 186
G+ L T N L+ + CK G K+ D+ +RG +G + E+
Sbjct: 211 GVSLCLSTFNKLLRVLCKK---GDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 187 D-SVRKVFDLM---PARDVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSI 242
D +VR V L+ P DV+++N +I G +N F+EA + +M ++ L+PDS+T +++
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL 327
Query: 243 LPIFAEHVDVVKGMEIHGYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFY------L 296
+ + + V I G A+ +GF D F SLID +L F +
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Query: 297 LPYRDAISWNSIIAGCVQNGKFDQGIGFFRQMLKAKVKPMQVSFSSVIPACAHLTALNLG 356
P + I +N++I G G + +M + + P +F+ ++ + ++
Sbjct: 388 KP--NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 357 KQLHGCIIRLGFDDNKFIASSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMG 412
L +I G+ + F + L+ Y+ ++ A I D + D+ + +++ G
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 413 CAMHGHALDAVSLFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEGWKYFNSMEKDFRIAP 472
D + ++ M+E G P F +L + +DE M K+ + P
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM-KNKSVNP 564
Query: 473 GLEHYAAVADLLGRAGRLEEAYDFISNM----GIQPTGSVWSTLLAACRAHKSVELAEKV 528
+ + D + G L+ AY M + + ++ ++ A +V +AEK+
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKL 624
Query: 529 VDKIL--LVDPENMGAYVLMSNIYSAAKRWKDAAKLRIHMRSKGLKKTPACSWIEIGNKV 586
+++ + P+ Y LM + + K + M G P S +G +
Sbjct: 625 FQEMVDRCLGPDGY-TYRLMVDGFCKTGNVNLGYKFLLEMMENGF--IP--SLTTLGRVI 679
Query: 587 HTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTSEVLHDVD 630
+ D+ + EA I + +M ++G V + + DVD
Sbjct: 680 NCLCVEDRVY-------EAAGI-IHRMVQKGLVPEAVNTICDVD 715
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/430 (20%), Positives = 186/430 (43%), Gaps = 70/430 (16%)
Query: 200 DVVSWNTVIAGNAQNGMFREALDMVREMGDDKLKPDSFTLSSILPIFAEHVDVVKGMEIH 259
D+V++N++I + +FREA +++EM + + P++ + S++L ++ E+ ++ + +
Sbjct: 259 DLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVF 318
Query: 260 GYAIRHGFDGDVFIGSSLIDMYAKCNRVEHSLRAFYLLPYRD----AISWNSIIAGCVQN 315
D+ + +ID+Y + + V+ + R F+ L D +S+N+I+ +
Sbjct: 319 AEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEA 378
Query: 316 GKFDQGIGFFRQMLKAKVKPMQVSFSSVI----PACAHLTALNLGKQLHGCIIRLGFDDN 371
F + I FR M + ++ V+++++I H A NL +++ G + N
Sbjct: 379 ELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSR----GIEPN 434
Query: 372 KFIASSLVDMYAKCGNIKMARYIFDKIETR----DMVAWTAIIMG---CAMHGHALDAVS 424
S+++ ++ K G + A +F K+ + D V + +I+ + GHA
Sbjct: 435 AITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHA----- 489
Query: 425 LFEKMLEDGVRPCYVAFMAVLTACSHAGLVDEG-W------------------------- 458
+++L + P + +T + AG +E W
Sbjct: 490 --KRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYS 547
Query: 459 ---KYFNSME--KDFRIA---PGLEHYAAVADLLGRAGRLEEAYDFISNMGIQPTGSVWS 510
+Y N +E + R A P A V + G+ E+A M Q G V+
Sbjct: 548 RNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREM--QEEGCVFP 605
Query: 511 -----TLLAACRAHKSVELAEKVVDKILLVDP--ENMGAYVLMSNIYSAAKRWKDAAKLR 563
+L+ + K E+ E + + L DP + +++++ +Y A + DA+++
Sbjct: 606 DEVHFQMLSLYSSKKDFEMVESLFQR-LESDPNVNSKELHLVVAALYERADKLNDASRVM 664
Query: 564 IHMRSKGLKK 573
MR +G+ K
Sbjct: 665 NRMRERGILK 674