Miyakogusa Predicted Gene

Lj4g3v3113310.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v3113310.1 tr|G7LBG4|G7LBG4_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_8g1,81.92,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
PPR: pentatricopeptide repeat domain,Pentatricopept,CUFF.52337.1
         (2132 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC593078 weakly similar to UniRef100_A7Q9X6 Cluster: Ch...   593   e-168

>gnl|LJGI|DC593078 weakly similar to UniRef100_A7Q9X6 Cluster: Chromosome chr8
           scaffold_68, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr8 scaffold_68, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (16%)
          Length = 545

 Score =  593 bits (299), Expect = e-168
 Identities = 304/306 (99%)
 Strand = Plus / Plus

                                                                       
Query: 247 atcaaatgctacacctctcactccctctatcacctctccttctcttccttcaatgccatg 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 atcaaatgctacacctctcactccctctatcacctctccttctcttccttcaatgccatg 299

                                                                       
Query: 307 cgcgctctgggaatctccccgacccgccacttcttcccttccctcctcaaagcttccacc 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 cgcgctctgggaatctccccgacccgccacttcttcccttccctcctcaaagcttccacc 359

                                                                       
Query: 367 cttttgaaccacccccacctcgctctctccctccacgccgctgccattcggcttggtctt 426
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 cttttgaaccacccccacctcgctctctccctccacgccgctgccattcggcttggtctt 419

                                                                       
Query: 427 gattttgacctctacactgccaatgctttgatgaacatgtactgtaaggttcagaacttg 486
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gattttgacctctacactgccaatgctttgatgaacatgtactgtaaggttcagaacttg 479

                                                                       
Query: 487 ggtgggttcgggtctgctaacaaggtgtttgatgaaaatcctcagcgagggaagggctgt 546
           |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 480 ggtgggttcgggtctgctaacaaggtgtttgatgnaaatccttagcgagggaagggctgt 539

                 
Query: 547 aagtgt 552
           ||||||
Sbjct: 540 aagtgt 545



 Score =  226 bits (114), Expect = 4e-58
 Identities = 120/122 (98%)
 Strand = Plus / Plus

                                                                       
Query: 8   cgaaagcaatgagttccatacaagacgcgatcacacgcattctcagaaacccaaacaccg 67
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cgaaagcaatgagttccatacaagacgcgatcacacgcattctcagaaacccaaacaccg 60

                                                                       
Query: 68  tcacttccacccaccacgccaagcaactccatgcgcacattctgaagacgagaggaacac 127
           ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 61  tcacttccacccaccacgccaagcaactccatgcttacattctgaagacgagaggaacac 120

             
Query: 128 tt 129
           ||
Sbjct: 121 tt 122