Miyakogusa Predicted Gene

Lj4g3v3113130.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3113130.1 Non Chatacterized Hit- tr|B9SHN6|B9SHN6_RICCO
Histidyl-tRNA synthetase, putative OS=Ricinus
communis,48.45,2e-17,seg,NULL; Lyase_aromatic,Aromatic amino acid
lyase; no description,NULL,gene.g58092.t1.1
         (118 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G02760.1 | Symbols:  | Class II aaRS and biotin synthetases s...    72   9e-14

>AT3G02760.1 | Symbols:  | Class II aaRS and biotin synthetases
           superfamily protein | chr3:597588-600650 REVERSE
           LENGTH=883
          Length = 883

 Score = 71.6 bits (174), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 5/103 (4%)

Query: 8   LLSVSAIIDRQXXXXXXXXXXXXXFSCEALKADVTAFNLMDSGDGHTFKDQVRVAGDMRV 67
           L+ + +IID +              SCE  KAD+ +F+L+DSGDG+  KD + VAGD++V
Sbjct: 131 LIGICSIIDHKSTTLSQIVDSVAALSCEVTKADIASFSLLDSGDGNGDKDVIGVAGDLKV 190

Query: 68  MLNGSKFVRNDNDGKDKNPSVTMVPNVHGAVREQVKLLHSKMK 110
           +LNG K       GK +   ++ +P +HG  R  VK +H+  +
Sbjct: 191 LLNGYK-----GTGKLEIEEISKIPWIHGKFRYVVKSVHADAR 228