Miyakogusa Predicted Gene

Lj4g3v3015190.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3015190.1 tr|Q7XPF2|Q7XPF2_ORYSJ OSJNBa0060N03.9 protein
OS=Oryza sativa subsp. japonica GN=OSJNBa0060N03.9
PE,56.58,0.000000000000002,GHMP_kinases_N,GHMP kinase N-terminal
domain; GALACTOKINASE 2,NULL; MEVALONATE
KINASE/GALACTOKINASE,,CUFF.52134.1
         (365 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G10700.1 | Symbols: GalAK | galacturonic acid kinase | chr3:3...   416   e-116

>AT3G10700.1 | Symbols: GalAK | galacturonic acid kinase |
           chr3:3346789-3350863 REVERSE LENGTH=424
          Length = 424

 Score =  416 bits (1069), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 208/362 (57%), Positives = 258/362 (71%), Gaps = 10/362 (2%)

Query: 4   IAWPPESELDEIREIVSKMADVSKEEVRVVVSPYRICPLGAHIDHQGGMVSAMTIDKGIL 63
           ++WP +SEL+ I+E V++M+   K EVRVVV+PYRICPLGAHIDHQGG VSAMTI+KGIL
Sbjct: 1   MSWPTDSELNSIKEAVAQMSGRDKGEVRVVVAPYRICPLGAHIDHQGGTVSAMTINKGIL 60

Query: 64  LGFTPSDSNEIVIRSGQFQGEVKFRIDENPQPKRSRSKNENTVKDSSVLQEQCNWGRYAR 123
           LGF PS   ++ +RS QF+GEV FR+DE   P    +KN  +    S  +E+  WG YAR
Sbjct: 61  LGFVPSGDTQVQLRSAQFEGEVCFRVDEIQHPIGLANKNGASTPSPS--KEKSIWGTYAR 118

Query: 124 GAIYALKSKGNNLSKGIIGYICXXXXXXXXXXXXXXXXXXXXXXXXXHANNLVISPTENI 183
           GA+YAL+S   NL +GIIGY+                          +AN L +SPTENI
Sbjct: 119 GAVYALQSSKKNLKQGIIGYLSGSNGLDSSGLSSSAAVGVAYLLALENANELTVSPTENI 178

Query: 184 EYDRLIENEYLGLKNGIMDQSAILLSSHGCLMCMDCKTKEYELIHRPKVXXXXXXXXPKA 243
           EYDRLIEN YLGL+NGI+DQSAILLS++GCL  MDCKT ++EL+  P++         K 
Sbjct: 179 EYDRLIENGYLGLRNGILDQSAILLSNYGCLTYMDCKTLDHELVQAPELE--------KP 230

Query: 244 IKILLALSGIRQALTSNPGYNKRVAECREAARILLEASGDYEAEPILSNVAPEVYETHKC 303
            +ILLA SG+RQALT+NPGYN RV+EC+EAA++LL ASG+ E EP L NV   VYE HK 
Sbjct: 231 FRILLAFSGLRQALTTNPGYNLRVSECQEAAKVLLTASGNSELEPTLCNVEHAVYEAHKH 290

Query: 304 KLEPDLAKRAEHYFSENMRVLKGIEAWKMGKFNHYGNLIAASGRSSIQNYECGSEPLIQL 363
           +L+P LAKRAEHYFSENMRV+KG EAW  G    +G LI+ASG SSI+NYECG+EPLIQL
Sbjct: 291 ELKPVLAKRAEHYFSENMRVIKGREAWASGNLEEFGKLISASGLSSIENYECGAEPLIQL 350

Query: 364 YE 365
           Y+
Sbjct: 351 YK 352