Miyakogusa Predicted Gene

Lj4g3v2846370.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2846370.1 tr|Q4V9B5|Q4V9B5_DANRE Baz1a protein (Fragment)
OS=Danio rerio GN=baz1a PE=2 SV=1,38.13,6e-18,coiled-coil,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; domain in different
transcription,CUFF.51876.1
         (694 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G08630.1 | Symbols:  | DDT domain-containing protein | chr5:2...   636   0.0  
AT5G44180.1 | Symbols:  | Homeodomain-like transcriptional regul...    61   3e-09
AT1G28420.1 | Symbols: HB-1 | homeobox-1 | chr1:9979936-9987460 ...    54   3e-07

>AT5G08630.1 | Symbols:  | DDT domain-containing protein |
           chr5:2798575-2802138 REVERSE LENGTH=723
          Length = 723

 Score =  636 bits (1640), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/733 (49%), Positives = 474/733 (64%), Gaps = 49/733 (6%)

Query: 1   MPLLRRKAFALVEPPEDLKLDEQVYTIRYTKEIFRDYPDYLKRLSLYRQRVWTCNFTGKT 60
           MPLL++K+  L+EPP++L+  E VY +R T EIFRDY  YLKRL+LYR RVWTC  TGKT
Sbjct: 1   MPLLKKKSHKLLEPPKNLEPQELVYQVRLTNEIFRDYQLYLKRLNLYRNRVWTCKSTGKT 60

Query: 61  GLTYEEALVSEQRANEKVQQIPKEFMASALRIIQYSMLPLKDLADSIAEKLNERLFVGAE 120
            L+YEEAL SE+ A +KVQ +P+E +A ALRIIQ+S L LKDLAD IA +L +  F GAE
Sbjct: 61  SLSYEEALDSEKLAGKKVQTLPRELVAPALRIIQFSTLSLKDLADKIATELQDCFFPGAE 120

Query: 121 VYGKKDDGVCPCKILKVIKKGVDQLCYEVAWLDKNKNISEKAEISAEDLVQKKPLFSRNT 180
           +YG++D  + PCKIL+++  G  +  YEV +LDKNK + +   +  EDL  KK  FSRN 
Sbjct: 121 LYGERDGELHPCKILRIVSDGDSKPQYEVGFLDKNKEVDDNTVLFGEDLSWKKFPFSRNF 180

Query: 181 LKSFIRESTYRNAPWVLNEELALNHGISTEIPQELKERVFFKDGLIVCSKKRKNEDET-- 238
           LKSFIR+ST  + PWV+N+ LA  H I+ +IP+EL+ +  F++G +V  ++RK ED+T  
Sbjct: 181 LKSFIRDSTCHSIPWVVNDYLAKAHEITRKIPKELQNKYVFQNGELV--QQRKQEDKTGR 238

Query: 239 ENSKRKKLDG---------KLVNGSAEEKEPIKYPIDDLLVKRSADDPVFTDRPSPTRDF 289
           EN KRK+ +          + VNGS  E+E I YPI+DLL+     DP  T RPSP+RDF
Sbjct: 239 ENRKRKRAENGKHVAEETDREVNGS--EEEAINYPIEDLLL---PPDPDVTQRPSPSRDF 293

Query: 290 SVPMFCVGDLLMVWDFCASFGKPLNLWPYSLEDFENAICHKDSNVVLLVESHAALFRVLI 349
           SVPM CVGDLLMVWDFC SFG+ L+LW +SLEDFENA+CHK+SN+VL++E HA+LFR LI
Sbjct: 294 SVPMDCVGDLLMVWDFCTSFGRQLHLWRFSLEDFENAVCHKESNLVLIMEVHASLFRFLI 353

Query: 350 KEDGEYSSIVKKR----KITLINWTEYLCDFLQMINIPALRQHEGTIKRGHYGLLDANVK 405
            E G+    +++R    KITLI W EYLCDFL+ +N P L    GTIKRGHYGLLD NVK
Sbjct: 354 NERGDSFKALQRRSRKSKITLITWAEYLCDFLESVNTPDLCFDVGTIKRGHYGLLDPNVK 413

Query: 406 LGILSELVNQVLETGAFRETMDELMEQRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN 465
           L IL ELVN + ETG F+  +DEL+EQR                               N
Sbjct: 414 LKILRELVNHITETGMFKGEIDELVEQRHALGAARREEALAEARQIREEKERSKTGEEAN 473

Query: 466 GIMNGHH----PNSA----NGDVGKKS-----NGEIQNGDVGKKSNGKIESSRQNNPLGA 512
           G+++ +      NSA    + +  KK+       +++NG V   S+  IE S +      
Sbjct: 474 GVLDNNRLEKKKNSAQVLESSEDSKKNESTAGGSKMENGSV---SSENIEKSEKRLIGNV 530

Query: 513 SGTKHSNSAS-----KKIPTKLNSELKEPVENGKDILKQSKGDKDPSEKNS------KQK 561
              KH    +      K   +     ++  E G  + KQ        EK +      +Q+
Sbjct: 531 YLRKHKRQMTDTKIEPKEEEEDEKAEEDEEEKGFSVKKQEVKSASEDEKGTFERRGPEQR 590

Query: 562 KEYFQKEMEKRLIRRSPLGQDRERNRYWWFHRDWRIFVENKDSTVWGYYSSKEELDALMG 621
           ++Y+++EMEK +IR +PLG+DR+ NRYWWF  + RIFVEN DS  WGYY++KEELDALMG
Sbjct: 591 RQYYEREMEKIVIRTNPLGKDRDYNRYWWFRSNGRIFVENSDSEEWGYYTAKEELDALMG 650

Query: 622 SLNCKGVRERALQKQLEKYYSSICSELRKRSKDLMSNTASDESVLRRSTRVRAPPRQNPA 681
           SLN KG RE +L  QLE +Y  ICS L+KR+KD+  N   +E+V+RRSTRVRAP  +NPA
Sbjct: 651 SLNRKGERELSLYTQLEIFYDRICSTLQKRTKDIAHNIEMEEAVVRRSTRVRAPLHENPA 710

Query: 682 NAFLRYANKWKEE 694
           +AFLRY NKWKE+
Sbjct: 711 SAFLRYVNKWKED 723


>AT5G44180.1 | Symbols:  | Homeodomain-like transcriptional regulator
            | chr5:17783172-17789872 FORWARD LENGTH=1694
          Length = 1694

 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 57/115 (49%), Gaps = 10/115 (8%)

Query: 545  KQSKGDKDPSEKNSKQKKEYFQKEMEKRLIRRS-PLGQDRERNRYWWFHRD--------W 595
            +Q +G     E+   Q K Y   + E+  + RS PLGQDR RNRYW F            
Sbjct: 1041 QQQQGYTADRERLRAQLKAYVGYKAEELYVYRSLPLGQDRRRNRYWRFSASASRNDPGCG 1100

Query: 596  RIFVENKDSTVWGYYSSKEELDALMGSLNCKGVRERALQKQLEKYYSSICSELRK 650
            RIFVE +D   W    S+E  D L+ SL+ +GVRE  L   L K  +S    LR+
Sbjct: 1101 RIFVELQDGR-WRLIDSEEAFDYLVKSLDVRGVRESHLHFMLLKIEASFKEALRR 1154


>AT1G28420.1 | Symbols: HB-1 | homeobox-1 | chr1:9979936-9987460
           FORWARD LENGTH=1705
          Length = 1705

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 2/57 (3%)

Query: 295 CVGDLLMVWDFCASFGKPLNLWPYSLEDFENAICHKDSNVVLLVESHAALFRVLIKE 351
            VG+LLMVW F  SF   L+LWP++L++F  A    DS   LL E H  L R +I++
Sbjct: 551 TVGNLLMVWRFLISFSDVLDLWPFTLDEFIQAFHDYDSR--LLGEIHVTLLRSIIRD 605



 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 25/158 (15%)

Query: 509  PLGASGTKHSNSASKKIPTKLNSELKEPVENGKDILKQSKGDKD-------------PSE 555
            P+  S T+  +S  +  P++L  E K P+E+  + L +S  ++               S+
Sbjct: 1022 PIIQSSTRERDSFDRD-PSQLLDETK-PLEDLSNDLHKSSAERALINQDANISQENYASK 1079

Query: 556  KNSKQKKEYFQKEMEKRLIRRS-PLGQDRERNRYWWFHRDWR--------IFVENKDSTV 606
            ++  Q K Y   + E+    RS PLGQDR  NRYW F             +FVE  D   
Sbjct: 1080 RSRSQLKSYIGHKAEEVYPYRSLPLGQDRRHNRYWHFAVSVSKSDPCSRLLFVELHDGK- 1138

Query: 607  WGYYSSKEELDALMGSLNCKGVRERALQKQLEKYYSSI 644
            W    S+E  D L+ SL+ +G+RE  L+  L+K   S 
Sbjct: 1139 WLLIDSEEAFDILVASLDMRGIRESHLRIMLQKIEGSF 1176