Miyakogusa Predicted Gene

Lj4g3v2825540.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2825540.1 Non Characterized Hit- tr|I1K512|I1K512_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42691
PE,63.64,0.0000000000006,seg,NULL,95247_g.1
         (68 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g096520.3 | E3 ubiquitin-protein ligase RGLG2-like protein...    57   5e-09
Medtr3g096520.1 | E3 ubiquitin-protein ligase RGLG2-like protein...    57   5e-09
Medtr3g096520.2 | E3 ubiquitin-protein ligase RGLG2-like protein...    57   5e-09

>Medtr3g096520.3 | E3 ubiquitin-protein ligase RGLG2-like protein |
           HC | chr3:44128294-44132918 | 20130731
          Length = 455

 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/48 (58%), Positives = 36/48 (75%), Gaps = 2/48 (4%)

Query: 21  QPPSYVGSSANSNYQYHKPSSDAGTSKNTRHQHKQRPKYIADNFSSLD 68
           QP +Y G+  N+N+  H+PSS A +S NTRH H ++P YIADNFSSLD
Sbjct: 65  QPSAYTGNLGNTNH--HQPSSHATSSVNTRHHHNKQPTYIADNFSSLD 110


>Medtr3g096520.1 | E3 ubiquitin-protein ligase RGLG2-like protein
          | HC | chr3:44128276-44132925 | 20130731
          Length = 438

 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/48 (58%), Positives = 36/48 (75%), Gaps = 2/48 (4%)

Query: 21 QPPSYVGSSANSNYQYHKPSSDAGTSKNTRHQHKQRPKYIADNFSSLD 68
          QP +Y G+  N+N+  H+PSS A +S NTRH H ++P YIADNFSSLD
Sbjct: 48 QPSAYTGNLGNTNH--HQPSSHATSSVNTRHHHNKQPTYIADNFSSLD 93


>Medtr3g096520.2 | E3 ubiquitin-protein ligase RGLG2-like protein
          | HC | chr3:44128294-44132918 | 20130731
          Length = 437

 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/48 (58%), Positives = 36/48 (75%), Gaps = 2/48 (4%)

Query: 21 QPPSYVGSSANSNYQYHKPSSDAGTSKNTRHQHKQRPKYIADNFSSLD 68
          QP +Y G+  N+N+  H+PSS A +S NTRH H ++P YIADNFSSLD
Sbjct: 48 QPSAYTGNLGNTNH--HQPSSHATSSVNTRHHHNKQPTYIADNFSSLD 93