Miyakogusa Predicted Gene

Lj4g3v2775620.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2775620.1 tr|G1MDL8|G1MDL8_AILME Ubiquitin
carboxyl-terminal hydrolase OS=Ailuropoda melanoleuca GN=USP30
PE=3,25.98,1e-17,UCH_2_2,Peptidase C19, ubiquitin carboxyl-terminal
hydrolase 2, conserved site; UCH,Peptidase C19, u,CUFF.51620.1
         (572 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g15330.1                                                       699   0.0  
Glyma05g32020.1                                                       657   0.0  
Glyma05g16370.1                                                        80   7e-15
Glyma11g36400.1                                                        57   6e-08
Glyma18g00330.1                                                        52   2e-06
Glyma20g36020.1                                                        51   5e-06

>Glyma08g15330.1 
          Length = 529

 Score =  699 bits (1803), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/545 (66%), Positives = 416/545 (76%), Gaps = 38/545 (6%)

Query: 30  FALKETKAK---TLLWSSGTRRSNSSNLDNKKPLLVPGLHNLRNNCFLNVVLQALASCFC 86
            ALK+ K     TL WS  T  S+      +K L VPGL NL+NNCFLNVVLQALASCFC
Sbjct: 19  LALKDAKVAIPFTLPWSFATDNSSF-----EKSLFVPGLQNLQNNCFLNVVLQALASCFC 73

Query: 87  FHGFLHRVIAECGTQDMVESETDQSMPLAASLVALLQELSSVSGEKVILSPREIMLAMSL 146
           F  FLH VI ECG++D+     D++MPLA +L  LL+ELSS S E+V LSPR++MLAMS 
Sbjct: 74  FQSFLHSVIGECGSKDL-----DENMPLALALATLLEELSSFSSERVTLSPRKMMLAMSN 128

Query: 147 YNPDFNLTDQQDAAEAFLHLLCSLREEFGGCYAPNVSSLADVCASNNRIIAPIQRDWKSE 206
           Y P+FNLT QQDAAEAFLHLLC LREEFGGCYAP +SSLA++ ASNNRI+ PIQ D +SE
Sbjct: 129 YIPNFNLTSQQDAAEAFLHLLCLLREEFGGCYAPKMSSLAEIFASNNRILTPIQSDCQSE 188

Query: 207 QERWKQLFLGPFDGILGSSLTCRSCSSQISMNFEHFDCLPLSPVLSDSFTIRVGCTLVDC 266
           QERW+QLFLGPFDGILGSSLTC+SCSSQIS+NFEHFDCLPLSPVLSD+ TIRVGCTLVDC
Sbjct: 189 QERWQQLFLGPFDGILGSSLTCQSCSSQISINFEHFDCLPLSPVLSDTSTIRVGCTLVDC 248

Query: 267 LKQFIVAEHVENYHCSHCWHNAAIKYISXXXXXXXXXXXXXXCSEQELCNCRTKFNLEKL 326
           LKQFIVAEHVENYHCS CWHNAAIKY+S              CS+ E+C+CR  +NL+KL
Sbjct: 249 LKQFIVAEHVENYHCSQCWHNAAIKYLSIMEGNEVELEKLRRCSDPEICDCRKMYNLDKL 308

Query: 327 PWSTRFSHVLKQLSIAQCPRILCIQLKRVHMSIFGEPVKLQGHISFPLILDVLPFTTTRL 386
           PWS RFSH LKQLS+A+CPRILCIQLKRV+M++FGE VKLQGHISFPLILDVL F TTRL
Sbjct: 309 PWSNRFSHTLKQLSMARCPRILCIQLKRVYMNVFGELVKLQGHISFPLILDVLSFMTTRL 368

Query: 387 GVNIQEVDIRSLPLHLQNSRRNPLTNHYNQHSEVGTLKFSGINGEVREKINAGGLIDDGF 446
           GV   ++D++S+PL+L                   TLKFSG++G  +E+I + G+IDDG 
Sbjct: 369 GVKKHDIDVQSVPLNL------------------NTLKFSGLHGAKKEQIKSDGVIDDGL 410

Query: 447 ASCTNRQA-SNDPIYPCSSSSVSIHTDTQTQSIDKVDGSYNLVSQEACLYQLVSVVEHFG 505
            S TN QA  ND ++PCS SS SIH+DT  QSID+V      V QE C YQLVSVVEHFG
Sbjct: 411 VSSTNGQALHNDTVFPCSGSSESIHSDTHMQSIDQV------VPQETCSYQLVSVVEHFG 464

Query: 506 RAGGGHYTVYRCARAETSDVSGDRCFNQTPRRWFCVSDSQVDAVSEEDVLSSEASLLFYE 565
           +AG GHYTVYR  R E S+   D   NQTP RWFC+SDSQV AVS EDVLSSEASLLFYE
Sbjct: 465 KAGSGHYTVYRSVRVEFSEDVSDDYLNQTPMRWFCISDSQVHAVSVEDVLSSEASLLFYE 524

Query: 566 RIPKN 570
           RIP+N
Sbjct: 525 RIPRN 529


>Glyma05g32020.1 
          Length = 469

 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/469 (70%), Positives = 378/469 (80%), Gaps = 10/469 (2%)

Query: 112 MPLAASLVALLQELSSVSGEKVILSPREIMLAMSLYNPDFNLTDQQDAAEAFLHLLCSLR 171
           MPLA +L  LL+ELSSVS E+V LSPR++MLAMS   P+FNLT QQDAAEAFLHLLC LR
Sbjct: 1   MPLALALATLLEELSSVSAERVTLSPRKMMLAMSNNIPNFNLTSQQDAAEAFLHLLCLLR 60

Query: 172 EEFGGCYAPNVSSLADVCASNNRIIAPIQRDWKSEQERWKQLFLGPFDGILGSSLTCRSC 231
           EEFGGCYAP +SSLAD+ ASNNRI+ PIQRD +SEQERW+QLFLGPFDGILGS LTC+SC
Sbjct: 61  EEFGGCYAPKMSSLADIFASNNRILTPIQRDCQSEQERWQQLFLGPFDGILGSRLTCQSC 120

Query: 232 SSQISMNFEHFDCLPLSPVLSDSFTIRVGCTLVDCLKQFIVAEHVENYHCSHCWHNAAIK 291
           SS IS+NFEHFDCLPLSPVLSD+ ++RVGCTLVDCLKQFIVAEHVENY CSHCWHNAAIK
Sbjct: 121 SSLISINFEHFDCLPLSPVLSDTSSMRVGCTLVDCLKQFIVAEHVENYRCSHCWHNAAIK 180

Query: 292 YISXXXXXXXXXXXXXXCSEQELCNCRTKFNLEKLPWSTRFSHVLKQLSIAQCPRILCIQ 351
           Y+S              CS+ E+CNCR  +NL+KLPWS RFSH LKQLSIA+CPRILCIQ
Sbjct: 181 YLSIMEGNEVELKMIRRCSDPEICNCRKMYNLDKLPWSNRFSHTLKQLSIARCPRILCIQ 240

Query: 352 LKRVHMSIFGEPVKL---------QGHISFPLILDVLPFTTTRLGVNIQEVDIRSLPLHL 402
           LKRV+M++FGE VKL         QGHISFPLILDVL F TTRLGV  Q++D++SLPL+L
Sbjct: 241 LKRVYMNVFGELVKLQNFVVMMVMQGHISFPLILDVLSFMTTRLGVKTQDIDVQSLPLNL 300

Query: 403 QNSRRNPLTNHYNQHSEVGTLKFSGINGEVREKINAGGLIDDGFASCTNRQA-SNDPIYP 461
           + +RRN   NH +  SE+ TLKFSG+ G  RE+IN+ G+IDDGF S TN QA  +D ++P
Sbjct: 301 KYNRRNFFPNHSDLQSEISTLKFSGLYGATREQINSDGVIDDGFVSSTNGQALHSDTVFP 360

Query: 462 CSSSSVSIHTDTQTQSIDKVDGSYNLVSQEACLYQLVSVVEHFGRAGGGHYTVYRCARAE 521
           CS SS SIH+DT  QSID+VD S NLV QE CLYQLVSVVEHFG+AG GHYTVYR  R E
Sbjct: 361 CSGSSESIHSDTHMQSIDQVDVSCNLVPQETCLYQLVSVVEHFGKAGSGHYTVYRSVRVE 420

Query: 522 TSDVSGDRCFNQTPRRWFCVSDSQVDAVSEEDVLSSEASLLFYERIPKN 570
           +S+   D   NQTP RWFC+SDSQV AVS E VLSSEASLLFYERIP+N
Sbjct: 421 SSEDVSDDYLNQTPMRWFCISDSQVHAVSVEGVLSSEASLLFYERIPRN 469


>Glyma05g16370.1 
          Length = 213

 Score = 79.7 bits (195), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 51/81 (62%), Gaps = 17/81 (20%)

Query: 144 MSLYNPDFNLTDQQ-----------------DAAEAFLHLLCSLREEFGGCYAPNVSSLA 186
           MS Y P+FNLT QQ                     +FLHLLC LREEFGGCYAP +SSLA
Sbjct: 1   MSNYIPNFNLTSQQVELCVCLRIDLVVDLCFSFVSSFLHLLCLLREEFGGCYAPKMSSLA 60

Query: 187 DVCASNNRIIAPIQRDWKSEQ 207
           ++ ASNNRI+ PIQ D +S++
Sbjct: 61  EIFASNNRILTPIQSDCQSDK 81


>Glyma11g36400.1 
          Length = 881

 Score = 57.0 bits (136), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 488 VSQEACLYQLVSVVEHFGRAGGGHYTVYRCARAETSDVSGDRCFNQTPRRWFCVSDSQVD 547
           +++E   Y LV +VEH G   GGHY  Y       S   GD+        W+  SD+ V 
Sbjct: 804 INEEKYEYHLVGLVEHSGTMRGGHYVAYVRGGQRNSGKGGDK--ENEGSTWYQASDAYVR 861

Query: 548 AVSEEDVLSSEASLLFYERI 567
            VS ++VL  EA +LFYE+I
Sbjct: 862 EVSLDEVLRCEAYILFYEKI 881


>Glyma18g00330.1 
          Length = 916

 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 3/80 (3%)

Query: 488 VSQEACLYQLVSVVEHFGRAGGGHYTVYRCARAETSDVSGDRCFNQTPRRWFCVSDSQVD 547
           +++E   Y LV +VEH G   GGHY  Y     + +   GD+        W+  SD+ V 
Sbjct: 840 INEEKYAYHLVGLVEHSGTMRGGHYVAY-VRGGQRNCGKGDK--ENEGSTWYQASDAYVR 896

Query: 548 AVSEEDVLSSEASLLFYERI 567
            VS ++VL  EA +LFYE+I
Sbjct: 897 EVSLDEVLRCEAYILFYEKI 916


>Glyma20g36020.1 
          Length = 937

 Score = 50.8 bits (120), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 98/233 (42%), Gaps = 28/233 (12%)

Query: 41  LWSSGTRRSNSSNLDNKKPLL------VPGLHNLRNNCFLNVVLQALASCFCFHGFLHRV 94
           L+   +  S+ +N+D++  +       + GL NL N CF+N  +Q L             
Sbjct: 302 LYQGSSVSSSLTNMDDRYDVYKGERGGLAGLQNLGNTCFMNSSIQCLVHT--------PP 353

Query: 95  IAECGTQDMVESETDQSMP------LAASLVALLQELSSVSGEKVILSPREIMLAMSLYN 148
           ++E   QD  + E +   P      LA +   LL++L S SG   I +PR     ++ + 
Sbjct: 354 LSEYFLQDYSD-EINMDNPLGMCGELALAFGDLLRKLWS-SGRTAI-APRAFKSKLARFA 410

Query: 149 PDFNLTDQQDAAEAFLHLLCSLREEFGGCYAPNVSSLADVCASNNRIIAPIQRDWKSEQE 208
           P F+  +Q D+ E    LL  L E+           + D     +  +A     WK+   
Sbjct: 411 PQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSDGRPDEEVA--SECWKNHMA 468

Query: 209 RWKQLFLGPFDGILGSSLTCRSCSSQISMNFEHFD--CLPLSPVLSDSFTIRV 259
           R   L +    G   S+L C  C  +IS+ F+ F    LPL   ++ + TI V
Sbjct: 469 RNDSLIVDVCQGQYKSTLVCPVC-GKISITFDPFMYLSLPLPSTVTRTMTITV 520