Miyakogusa Predicted Gene

Lj4g3v2693600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2693600.1 Non Characterized Hit- tr|G7L8V7|G7L8V7_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,52.08,5e-17,
,CUFF.51520.1
         (98 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g088840.1 | kinetochore Nuf2-like protein | LC | chr8:3690...    94   2e-20
Medtr8g088840.2 | kinetochore Nuf2-like protein | LC | chr8:3690...    79   1e-15
Medtr8g088800.1 | kinetochore Nuf2-like protein | LC | chr8:3689...    75   2e-14
Medtr4g049650.1 | kinetochore Nuf2-like protein | LC | chr4:1748...    61   2e-10

>Medtr8g088840.1 | kinetochore Nuf2-like protein | LC |
           chr8:36902691-36909478 | 20130731
          Length = 459

 Score = 94.4 bits (233), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/96 (53%), Positives = 70/96 (72%), Gaps = 3/96 (3%)

Query: 1   MCEEATNYLSSAKSEVESKRCTLETRQRNVEAVLSEVDAVNCKITSVKELASVRVEQLDR 60
           M +E T YLSS KSE ESKR  +ETRQRNVEA+LS+VD +N + TSVKE A+++V+Q++ 
Sbjct: 363 MMDEGTKYLSSIKSEAESKRRDIETRQRNVEAILSKVDVINSRETSVKESATLKVDQMEI 422

Query: 61  KCEEIVVEFHKYANSI-SRVIKSGPE--ATERGEFD 93
           KC E+   F KY+NS  +RV++SG +    +R  FD
Sbjct: 423 KCSELFEVFRKYSNSFDARVVESGLKNATVKRAGFD 458


>Medtr8g088840.2 | kinetochore Nuf2-like protein | LC |
           chr8:36902691-36908687 | 20130731
          Length = 452

 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/65 (60%), Positives = 52/65 (80%)

Query: 1   MCEEATNYLSSAKSEVESKRCTLETRQRNVEAVLSEVDAVNCKITSVKELASVRVEQLDR 60
           M +E T YLSS KSE ESKR  +ETRQRNVEA+LS+VD +N + TSVKE A+++V+Q++ 
Sbjct: 363 MMDEGTKYLSSIKSEAESKRRDIETRQRNVEAILSKVDVINSRETSVKESATLKVDQMEI 422

Query: 61  KCEEI 65
           KC E+
Sbjct: 423 KCSEL 427


>Medtr8g088800.1 | kinetochore Nuf2-like protein | LC |
           chr8:36892598-36888274 | 20130731
          Length = 425

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/62 (59%), Positives = 48/62 (77%)

Query: 21  CTLETRQRNVEAVLSEVDAVNCKITSVKELASVRVEQLDRKCEEIVVEFHKYANSISRVI 80
           C +E R+R+VEA  S+VDAVN +IT  KE A+ +V+QLD KCEEI  EFHKYANSI+  I
Sbjct: 358 CDIEIRRRHVEAEYSKVDAVNSRITLAKESATKKVDQLDSKCEEIEKEFHKYANSIAHAI 417

Query: 81  KS 82
           ++
Sbjct: 418 ET 419


>Medtr4g049650.1 | kinetochore Nuf2-like protein | LC |
           chr4:17480716-17477444 | 20130731
          Length = 398

 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 2/65 (3%)

Query: 36  EVDAVNCKITSVKELASVRVEQLDRKCEEIVVEFHKYANSISRVIKSGPEAT--ERGEFD 93
           EVDA N +ITS KE A+ +++QLD K  E+V EFHK ANS +RVI+S  +++  +R  FD
Sbjct: 334 EVDAANSRITSEKESATAKLDQLDSKGTELVEEFHKDANSFARVIESWRKSSTIKRARFD 393

Query: 94  IVDPV 98
            +D V
Sbjct: 394 NLDSV 398