Miyakogusa Predicted Gene
- Lj4g3v2604780.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2604780.2 Non Chatacterized Hit- tr|D7LGY0|D7LGY0_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,27.42,4e-18,seg,NULL; DUF688,Protein of unknown function
DUF688,CUFF.51314.2
(1710 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68570 homologue to UniRef100_A7QDJ4 Cluster: Chromoso... 70 5e-11
gnl|LJGI|FS319781 similar to UniRef100_A7QDJ4 Cluster: Chromosom... 64 3e-09
gnl|LJGI|FS336257 similar to UniRef100_A7QDJ4 Cluster: Chromosom... 64 3e-09
gnl|LJGI|BP054260 similar to UniRef100_A7QDJ4 Cluster: Chromosom... 60 5e-08
>gnl|LJGI|TC68570 homologue to UniRef100_A7QDJ4 Cluster: Chromosome chr10 scaffold_81,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_81, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 649
Score = 69.9 bits (35), Expect = 5e-11
Identities = 83/99 (83%)
Strand = Plus / Plus
Query: 1612 aagtgggaaacaatagtaaaaacttcaaatatgcatcatgatcatgcacacagttctcag 1671
||||||||||||||||| ||||||||||| || |||||||||||| || | |||||||
Sbjct: 149 aagtgggaaacaatagtgaaaacttcaaagttgaatcatgatcatgtacgctattctcag 208
Query: 1672 gagctagtgatatataaatctcagcattcaaaatcttag 1710
|| ||| || |||||| ||||||||||||||||||
Sbjct: 209 gaactaaccatgcataaattccagcattcaaaatcttag 247
Score = 67.9 bits (34), Expect = 2e-10
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 1474 ttgccaaagtcaccttctgagtcctggctttgtcgcgccttgcctttagtttctttgaag 1533
|||||||| ||||||||||||||||||||||| || ||| ||||| ||||||| | |||
Sbjct: 11 ttgccaaaatcaccttctgagtcctggctttggcgtgccctgcctacagtttctgtcaag 70
Query: 1534 aattcattcc 1543
||||| ||||
Sbjct: 71 aattctttcc 80
>gnl|LJGI|FS319781 similar to UniRef100_A7QDJ4 Cluster: Chromosome chr10 scaffold_81,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_81, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 667
Score = 63.9 bits (32), Expect = 3e-09
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 9 tgagagaaaattgaatattaatgctcctcttatgtctatgagacgctatagtggtacatc 68
|||||| ||||||||||| ||||||||||| ||||| ||||||||| | || ||||||
Sbjct: 431 tgagaggaaattgaatatcaatgctcctctcatgtcggtgagacgctcttctgctacatc 490
Query: 69 accatccaaaactgaa 84
||||||| |||||||
Sbjct: 491 accatccttaactgaa 506
>gnl|LJGI|FS336257 similar to UniRef100_A7QDJ4 Cluster: Chromosome chr10 scaffold_81,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_81, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 626
Score = 63.9 bits (32), Expect = 3e-09
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 9 tgagagaaaattgaatattaatgctcctcttatgtctatgagacgctatagtggtacatc 68
|||||| ||||||||||| ||||||||||| ||||| ||||||||| | || ||||||
Sbjct: 272 tgagaggaaattgaatatcaatgctcctctcatgtcggtgagacgctcttctgctacatc 331
Query: 69 accatccaaaactgaa 84
||||||| |||||||
Sbjct: 332 accatccttaactgaa 347
>gnl|LJGI|BP054260 similar to UniRef100_A7QDJ4 Cluster: Chromosome chr10 scaffold_81,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_81, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 560
Score = 60.0 bits (30), Expect = 5e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 1612 aagtgggaaacaatagtaaaaacttcaaatatgcatcatgatcatg 1657
||||||||||||||||| ||||||||||| || ||||||||||||
Sbjct: 525 aagtgggaaacaatagtgaaaacttcaaagttgaatcatgatcatg 480