Miyakogusa Predicted Gene
- Lj4g3v2604460.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2604460.1 tr|G7LIP3|G7LIP3_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_8g0,76.3,0,PPR,Pentatricopeptide repeat; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; TPR-like,NULL; PPR: p,CUFF.51411.1
(615 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 738 0.0
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 484 e-137
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 476 e-134
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 470 e-132
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 469 e-132
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 456 e-128
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 451 e-127
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 449 e-126
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 445 e-125
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 444 e-125
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 440 e-123
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 437 e-122
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 436 e-122
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 435 e-122
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 435 e-122
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 434 e-121
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 432 e-121
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 431 e-120
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 424 e-118
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 423 e-118
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 416 e-116
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 416 e-116
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 415 e-116
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 414 e-115
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 413 e-115
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 410 e-114
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 410 e-114
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 410 e-114
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 409 e-114
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 408 e-114
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 405 e-113
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 404 e-113
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 404 e-112
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 402 e-112
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 400 e-111
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 398 e-111
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 393 e-109
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 392 e-109
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 391 e-109
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 391 e-109
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 389 e-108
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 389 e-108
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 388 e-108
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 387 e-108
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 386 e-107
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 384 e-107
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 383 e-106
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 383 e-106
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 378 e-105
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 378 e-105
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 377 e-104
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 374 e-103
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 374 e-103
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 372 e-103
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 370 e-102
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 369 e-102
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 369 e-102
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 369 e-102
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 366 e-101
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 363 e-100
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 360 1e-99
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 359 3e-99
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 358 4e-99
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 357 1e-98
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 356 2e-98
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 354 8e-98
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 352 3e-97
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 352 4e-97
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 351 9e-97
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 350 2e-96
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 345 5e-95
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 344 9e-95
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 344 1e-94
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 343 1e-94
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 340 2e-93
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 340 2e-93
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 339 3e-93
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 338 5e-93
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 337 1e-92
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 336 3e-92
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 4e-92
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 6e-92
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 334 1e-91
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 333 2e-91
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 3e-89
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 324 1e-88
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 323 1e-88
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 2e-86
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 316 4e-86
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 316 4e-86
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 2e-85
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 2e-85
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 311 6e-85
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 311 6e-85
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 2e-84
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 309 3e-84
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 8e-84
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 299 5e-81
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 298 6e-81
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 7e-81
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 297 1e-80
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 293 2e-79
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 293 2e-79
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 1e-78
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 1e-78
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 1e-78
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 2e-78
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 4e-78
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 288 1e-77
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 1e-77
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 5e-77
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 1e-76
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 280 3e-75
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 4e-75
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 277 2e-74
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 8e-74
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 8e-74
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 2e-73
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 8e-73
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 1e-72
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 271 1e-72
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 3e-72
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 7e-72
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 2e-71
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 266 3e-71
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 4e-71
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 1e-70
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 2e-69
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 260 2e-69
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 9e-68
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 6e-67
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 251 9e-67
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 1e-66
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 5e-66
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 249 6e-66
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 7e-66
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 9e-66
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 246 3e-65
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 6e-65
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 244 2e-64
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 3e-64
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 241 1e-63
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 3e-63
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 236 2e-62
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 6e-62
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 5e-61
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 1e-60
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 230 2e-60
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 227 2e-59
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 6e-59
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 2e-58
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 4e-58
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 5e-58
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 6e-58
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 3e-57
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 6e-56
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 7e-56
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 8e-56
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 211 1e-54
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 3e-54
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 7e-53
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 3e-51
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 3e-51
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 6e-51
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 2e-49
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 3e-48
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 3e-46
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 2e-45
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 2e-45
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 9e-45
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 4e-42
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 4e-42
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 4e-32
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 5e-31
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 2e-27
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 118 1e-26
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 109 7e-24
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 7e-23
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 4e-22
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 102 6e-22
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 102 6e-22
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 9e-22
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 9e-22
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 100 2e-21
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 100 3e-21
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 100 3e-21
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 4e-21
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 4e-21
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 2e-20
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 3e-20
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 5e-20
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 92 9e-19
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 92 1e-18
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 91 3e-18
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 4e-18
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 4e-18
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-17
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-17
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 4e-16
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 6e-16
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 82 9e-16
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 2e-15
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 80 4e-15
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 77 4e-14
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 74 2e-13
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 74 3e-13
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 69 7e-12
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 69 1e-11
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 69 1e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 68 2e-11
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 9e-11
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 63 8e-10
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 62 1e-09
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 62 1e-09
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 61 2e-09
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 60 4e-09
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 59 9e-09
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 59 1e-08
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 5e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 53 7e-07
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 738 bits (1906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/616 (57%), Positives = 451/616 (73%), Gaps = 6/616 (0%)
Query: 4 ERRALEWQVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSY 63
++ L ++S L+ C L + KQ+H H+ R L QS YI+T L+R LT +P+ Y
Sbjct: 44 QKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKL--GVPMDPY 101
Query: 64 PRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA--- 120
R + V NPFL++A+IR Y + G F EA+ +Y MR + ITP+SFTFSAL A
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 121 VTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTEL 180
+ +L LG Q HA L ++V NTMI MYVK +D ARKVFDEMP+RDV+SWTEL
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 181 ITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
I AYAR G+M A ELF+ L KD VAWTAMVTG+AQNA P+EALE+F + ++G+ DE
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
VT+AG ISACAQLGASK AD IA+ SG+ P+ +V++GSAL+DMYSKCGNVEEA NVF
Sbjct: 282 VTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF 341
Query: 301 RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEML-ETEIKPNHVTFVGVLVACTHAGLV 359
M +N FTYSSMI+G A HGRA+ A+ LF+ M+ +TEIKPN VTFVG L+AC+H+GLV
Sbjct: 342 MSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLV 401
Query: 360 DQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLG 419
DQG+ +F +M +GV P+ DHY CM DLLGR G L++AL+L++TM VEP+G VWGALLG
Sbjct: 402 DQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLG 461
Query: 420 ASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKN 479
A +H NP++AEI + HLFELEP+ IGNY+LLSN YASAG W V RVRKL+++K LKK
Sbjct: 462 ACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKT 521
Query: 480 PGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKE 539
P SWV +NG +H+F G++ HP N+I+ L++L+ERL +GY P+LSSVPYD+ D
Sbjct: 522 PAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNA 581
Query: 540 KRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNM 599
KR +L+ H+EKLALAF LL T+ STI IMKNLR+C DCH M AS+VTG+ I++RDNM
Sbjct: 582 KRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNM 641
Query: 600 RFHHFLNGACSCGDFW 615
RFHHF +G CSCGDFW
Sbjct: 642 RFHHFRSGDCSCGDFW 657
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 484 bits (1246), Expect = e-137, Method: Compositional matrix adjust.
Identities = 248/608 (40%), Positives = 374/608 (61%), Gaps = 9/608 (1%)
Query: 11 QVVSILNTCTTLRRAKQLHAHIYRHNLH-QSSYIITNLLRHLTTTFPHLPIHSYPRLLFS 69
++ +++ ++ Q+HA I RHNL Y + NL H HS LF
Sbjct: 31 KLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLA--LFH 88
Query: 70 QVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQ 129
Q P+ FL++A I ++ G +A LY + + I P FTFS+L + + + G
Sbjct: 89 QTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS-GKL 147
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGD 189
+H H L G D +V ++ +Y K G + SA+KVFD MP+R +VS T +IT YA+ G+
Sbjct: 148 IHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGN 207
Query: 190 MNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFF-RCLREAGMETDEVTLAGAIS 248
+ +AR LFD + +D V+W M+ GYAQ+ P +AL F + L E + DE+T+ A+S
Sbjct: 208 VEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALS 267
Query: 249 ACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNA 308
AC+Q+GA + W+ +SS NV V + L+DMYSKCG++EEA VF ++
Sbjct: 268 ACSQIGALETGRWIHVFVKSSRI--RLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDI 325
Query: 309 FTYSSMIVGFAIHGRARAAIKLFYEMLE-TEIKPNHVTFVGVLVACTHAGLVDQGQYLFS 367
+++MI G+A+HG ++ A++LF EM T ++P +TF+G L AC HAGLV++G +F
Sbjct: 326 VAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFE 385
Query: 368 NMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNP 427
+M YG+ P +HY C+ LLGRAG L++A + ++ M ++ + +W ++LG+ +HG+
Sbjct: 386 SMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDF 445
Query: 428 DVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVES 487
+ + ++ +L L N G Y+LLSN YAS G ++ V++VR LM++K + K PG S +E
Sbjct: 446 VLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEI 505
Query: 488 RNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFLLMAH 547
N V HEF AGD +H + EI L + ER+K+ GY+PN ++V D+ + EK L H
Sbjct: 506 ENKV-HEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVH 564
Query: 548 SEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFLNG 607
SE+LA+A+GL++T GS +KI KNLR+C DCH V SK+TGRKIV+RD RFHHF +G
Sbjct: 565 SERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDG 624
Query: 608 ACSCGDFW 615
+CSCGDFW
Sbjct: 625 SCSCGDFW 632
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 476 bits (1225), Expect = e-134, Method: Compositional matrix adjust.
Identities = 235/612 (38%), Positives = 367/612 (59%), Gaps = 12/612 (1%)
Query: 10 WQVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHL--TTTFPHLPIHSYPRLL 67
++ +S L C+ KQ+HA + + L Q SY IT L +T+ LP Y +++
Sbjct: 15 YETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLP---YAQIV 71
Query: 68 FSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL- 126
F P+ FL++ +IR ++ +L LY M ++TF +L A +NL+
Sbjct: 72 FDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAF 131
Query: 127 --GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAY 184
TQ+HA LG+ +D++ N++I Y +G A +FD +P+ D VSW +I Y
Sbjct: 132 EETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGY 191
Query: 185 ARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLA 244
+ G M+ A LF ++ K+ ++WT M++GY Q M KEAL+ F ++ + +E D V+LA
Sbjct: 192 VKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLA 251
Query: 245 GAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK 304
A+SACAQLGA + W+ + + ++G L+DMY+KCG +EEA VF+ +K
Sbjct: 252 NALSACAQLGALEQGKWIHSYLNKTRI--RMDSVLGCVLIDMYAKCGEMEEALEVFKNIK 309
Query: 305 ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQY 364
+++ ++++I G+A HG R AI F EM + IKPN +TF VL AC++ GLV++G+
Sbjct: 310 KKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKL 369
Query: 365 LFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVH 424
+F +ME Y + P+ +HY C+ DLLGRAG L++A + ++ MP++PN +WGALL A +H
Sbjct: 370 IFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIH 429
Query: 425 GNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSW 484
N ++ E + L ++P + G Y+ +N +A +WD + R+LM+++ + K PG S
Sbjct: 430 KNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCST 489
Query: 485 VESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYD-IGDKEKRFL 543
+ S G HEFLAGD HPEI +I+ + +L+ GY+P L + D + D E+ +
Sbjct: 490 I-SLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAI 548
Query: 544 LMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHH 603
+ HSEKLA+ +GL+ T G+ I+IMKNLR+C+DCH V SK+ R IV+RD RFHH
Sbjct: 549 VHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHH 608
Query: 604 FLNGACSCGDFW 615
F +G CSCGD+W
Sbjct: 609 FRDGKCSCGDYW 620
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 470 bits (1209), Expect = e-132, Method: Compositional matrix adjust.
Identities = 230/610 (37%), Positives = 378/610 (61%), Gaps = 10/610 (1%)
Query: 13 VSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLT--TTFPH-LPIHSYPRLLFS 69
+++L +C++ K +H + R +L ++ + LL +TF + Y +FS
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 70 QVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT---L 126
Q+ +PN F+++ LIR ++ ++A YT M RI P + TF L A + + +
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135
Query: 127 GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYAR 186
G Q H+ + GF +D++V N+++ MY G + +A ++F +M RDVVSWT ++ Y +
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 187 NGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGA 246
G + +ARE+FDE+ ++ W+ M+ GYA+N ++A++ F ++ G+ +E +
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255
Query: 247 ISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER 306
IS+CA LGA + + R N+++G+ALVDM+ +CG++E+A +VF G+ E
Sbjct: 256 ISSCAHLGALEFGE--RAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPET 313
Query: 307 NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLF 366
++ ++SS+I G A+HG A A+ F +M+ P VTF VL AC+H GLV++G ++
Sbjct: 314 DSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIY 373
Query: 367 SNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGN 426
NM+ +G+ P +HY C+ D+LGRAG L +A + M V+PN + GALLGA ++ N
Sbjct: 374 ENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKN 433
Query: 427 PDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVE 486
+VAE V L +++P + G Y+LLSN YA AG+WD + +R +M++K +KK PG+S +E
Sbjct: 434 TEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIE 493
Query: 487 SRNGVIHEFLAGD-VKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFLLM 545
+G I++F GD KHPE+ +I++ +++L +++ IGY N +D+ ++EK +
Sbjct: 494 I-DGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIH 552
Query: 546 AHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFL 605
HSEKLA+A+G++ T G+TI+I+KNLR+CEDCH V S+V GR+++VRD RFHHF
Sbjct: 553 MHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFR 612
Query: 606 NGACSCGDFW 615
NG CSC D+W
Sbjct: 613 NGVCSCRDYW 622
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 469 bits (1208), Expect = e-132, Method: Compositional matrix adjust.
Identities = 230/554 (41%), Positives = 350/554 (63%), Gaps = 8/554 (1%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTN 123
+F+ + + ++++I + +G +AL L+ M ++ + T + SA + N
Sbjct: 188 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRN 247
Query: 124 LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
L G Q+ ++ ++ + N M+ MY K G ++ A+++FD M ++D V+WT ++
Sbjct: 248 LEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDG 307
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLR-EAGMETDEVT 242
YA + D +ARE+ + + KD VAW A+++ Y QN P EAL F L+ + M+ +++T
Sbjct: 308 YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQIT 367
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
L +SACAQ+GA + W+ + G N V SAL+ MYSKCG++E++ VF
Sbjct: 368 LVSTLSACAQVGALELGRWIHSYIKKHGI--RMNFHVTSALIHMYSKCGDLEKSREVFNS 425
Query: 303 MKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQG 362
+++R+ F +S+MI G A+HG A+ +FY+M E +KPN VTF V AC+H GLVD+
Sbjct: 426 VEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEA 485
Query: 363 QYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASH 422
+ LF ME YG+VP HYAC+ D+LGR+G+LEKA++ +E MP+ P+ +VWGALLGA
Sbjct: 486 ESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACK 545
Query: 423 VHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGY 482
+H N ++AE+ L ELEP N G ++LLSN YA G+W++VS +RK MR LKK PG
Sbjct: 546 IHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGC 605
Query: 483 SWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKE-KR 541
S +E +G+IHEFL+GD HP ++ L +++E+LK+ GY P +S V I ++E K
Sbjct: 606 SSIEI-DGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKE 664
Query: 542 FLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRF 601
L HSEKLA+ +GL++T+A I+++KNLR+C DCH V S++ R+I+VRD RF
Sbjct: 665 QSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRF 724
Query: 602 HHFLNGACSCGDFW 615
HHF NG CSC DFW
Sbjct: 725 HHFRNGQCSCNDFW 738
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 213/450 (47%), Gaps = 75/450 (16%)
Query: 13 VSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLT-TTFPHLPIHSYPRLLFSQV 71
+S++ C +LR+ KQ H H+ R Y + L ++F L Y R +F ++
Sbjct: 34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASL---EYARKVFDEI 90
Query: 72 PSPNPFLYSALIRAY-TLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTNLTLG 127
P PN F ++ LIRAY + P + + P +TF L A V++L+LG
Sbjct: 91 PKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLG 150
Query: 128 TQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARN 187
LH A+ SD+FV N++I Y G LDSA KVF + ++DVVSW +I + +
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 210
Query: 188 GDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAI 247
G + A ELF +++ +D ++ VT+ G +
Sbjct: 211 GSPDKALELFKKMESED-------------------------------VKASHVTMVGVL 239
Query: 248 SACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERN 307
SACA++ + V E + N+ + +A++DMY+KCG++E+A +F M+E++
Sbjct: 240 SACAKIRNLEFGRQVCSYIEENRVNV--NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKD 297
Query: 308 AFTYSSMIVGFAI-------------------------------HGRARAAIKLFYEM-L 335
T+++M+ G+AI +G+ A+ +F+E+ L
Sbjct: 298 NVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQL 357
Query: 336 ETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHL 395
+ +K N +T V L AC G ++ G+++ S ++ +G+ + + + + + G L
Sbjct: 358 QKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK-HGIRMNFHVTSALIHMYSKCGDL 416
Query: 396 EKALQLVETMPVEPNGAVWGALLGASHVHG 425
EK+ ++ ++ + + VW A++G +HG
Sbjct: 417 EKSREVFNSVE-KRDVFVWSAMIGGLAMHG 445
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 456 bits (1174), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/646 (36%), Positives = 367/646 (56%), Gaps = 52/646 (8%)
Query: 15 ILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSP 74
+L+T +R + +H+ I +L +S + L+R + L + R +F ++P
Sbjct: 48 VLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMR----AYASLKDVASARKVFDEIPER 103
Query: 75 NPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT---NLTLGTQLH 131
N + + +IR+Y G + E ++++ +M + P +TF + A + + +G ++H
Sbjct: 104 NVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIH 163
Query: 132 AHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMN 191
A +G +S +FV N ++ MY K G L AR V DEM +RDVVSW L+ YA+N +
Sbjct: 164 GSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFD 223
Query: 192 SARELFDELD----------------------------VKDK---------VAWTAMVTG 214
A E+ E++ VKD V+W M+
Sbjct: 224 DALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGV 283
Query: 215 YAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPA 274
Y +NAMP EA+E + + G E D V++ + AC A + E P
Sbjct: 284 YMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIP- 342
Query: 275 RNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEM 334
N+L+ +AL+DMY+KCG +E+A +VF MK R+ ++++MI + GR A+ LF ++
Sbjct: 343 -NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKL 401
Query: 335 LETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGH 394
++ + P+ + FV L AC+HAGL+++G+ F M Y + P +H ACM DLLGRAG
Sbjct: 402 QDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGK 461
Query: 395 LEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNT 454
+++A + ++ M +EPN VWGALLGA VH + D+ + + LF+L P G Y+LLSN
Sbjct: 462 VKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNI 521
Query: 455 YASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDD 514
YA AGRW++V+ +R +M+ K LKKNPG S VE N +IH FL GD HP+ +EI + LD
Sbjct: 522 YAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEV-NRIIHTFLVGDRSHPQSDEIYRELDV 580
Query: 515 LLERLKAIGYLPNLSSVPYDIGDKEKRFLLMAHSEKLALAFGLLNT-----DAGSTIKIM 569
L++++K +GY+P+ S +D+ +++K L HSEKLA+ F L+NT D+ +TI+I
Sbjct: 581 LVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRIT 640
Query: 570 KNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFLNGACSCGDFW 615
KNLRIC DCH+ S++T R+I++RD RFH F G CSCGD+W
Sbjct: 641 KNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 451 bits (1161), Expect = e-127, Method: Compositional matrix adjust.
Identities = 253/641 (39%), Positives = 367/641 (57%), Gaps = 44/641 (6%)
Query: 13 VSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPH-LPIHSYPRLLFSQV 71
+S+LN+C LR Q+H ++ + SY L+ H + LP Y R L
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALP---YARRLLLCF 65
Query: 72 PSPNPFLYSALIRAYTLRG-PFTEALRLYTSMRNQRITPISFTFSALFSAVTN---LTLG 127
P P+ F+++ L+R Y+ P MR + P SF+F+ + AV N L G
Sbjct: 66 PEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTG 125
Query: 128 TQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARN 187
Q+H AL G S +FV T+I MY GC++ ARKVFDEM Q ++V+W +ITA R
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRG 185
Query: 188 GDMNSARELFDELDVK-------------------------------DKVAWTAMVTGYA 216
D+ ARE+FD++ V+ D V+W+ M+ G A
Sbjct: 186 NDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIA 245
Query: 217 QNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARN 276
N E+ +FR L+ AGM +EV+L G +SAC+Q G+ + + E +G+ +
Sbjct: 246 HNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGY--SWI 303
Query: 277 VLVGSALVDMYSKCGNVEEAYNVFRGMKERNAF-TYSSMIVGFAIHGRARAAIKLFYEML 335
V V +AL+DMYS+CGNV A VF GM+E+ +++SMI G A+HG+ A++LF EM
Sbjct: 304 VSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMT 363
Query: 336 ETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHL 395
+ P+ ++F+ +L AC+HAGL+++G+ FS M+ Y + P +HY CM DL GR+G L
Sbjct: 364 AYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKL 423
Query: 396 EKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTY 455
+KA + MP+ P VW LLGA HGN ++AE V + L EL+PNN G+ +LLSN Y
Sbjct: 424 QKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAY 483
Query: 456 ASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDL 515
A+AG+W DV+ +RK M + +KK +S VE +++F AG+ K E + L ++
Sbjct: 484 ATAGKWKDVASIRKSMIVQRIKKTTAWSLVEV-GKTMYKFTAGEKKKGIDIEAHEKLKEI 542
Query: 516 LERLK-AIGYLPNLSSVPYDIGDKEKRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRI 574
+ RLK GY P ++S YD+ ++EK + HSEKLALAF L G+ I+I+KNLRI
Sbjct: 543 ILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRI 602
Query: 575 CEDCHIVMCGASKVTGRKIVVRDNMRFHHFLNGACSCGDFW 615
C DCH VM SKV G +I+VRD RFH F +G+CSC D+W
Sbjct: 603 CRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 449 bits (1156), Expect = e-126, Method: Compositional matrix adjust.
Identities = 231/620 (37%), Positives = 367/620 (59%), Gaps = 23/620 (3%)
Query: 16 LNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPN 75
+N C T+R Q+HA + + + +LR T+ H Y +F+Q+P N
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRN 89
Query: 76 PFLYSALIRAYTLRGPFTEALRL---YTSMRNQRITPISFTFSALFSAVTN---LTLGTQ 129
F ++ +IR ++ + + Y M ++ + P FTF ++ A + G Q
Sbjct: 90 CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVF------------DEMPQRD--VV 175
+H AL GF D FV + +++MYV G + AR +F + +RD +V
Sbjct: 150 IHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIV 209
Query: 176 SWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAG 235
W +I Y R GD +AR LFD++ + V+W M++GY+ N K+A+E FR +++
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269
Query: 236 METDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEE 295
+ + VTL + A ++LG+ + +W+ AE SG + ++GSAL+DMYSKCG +E+
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGI--RIDDVLGSALIDMYSKCGIIEK 327
Query: 296 AYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTH 355
A +VF + N T+S+MI GFAIHG+A AI F +M + ++P+ V ++ +L AC+H
Sbjct: 328 AIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSH 387
Query: 356 AGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWG 415
GLV++G+ FS M G+ P +HY CM DLLGR+G L++A + + MP++P+ +W
Sbjct: 388 GGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWK 447
Query: 416 ALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKN 475
ALLGA + GN ++ + V+ L ++ P++ G Y+ LSN YAS G W +VS +R M++K+
Sbjct: 448 ALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKD 507
Query: 476 LKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDI 535
++K+PG S ++ +GV+HEF+ D HP+ EI L ++ ++L+ GY P + V ++
Sbjct: 508 IRKDPGCSLIDI-DGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNL 566
Query: 536 GDKEKRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVV 595
+++K +L HSEK+A AFGL++T G I+I+KNLRICEDCH + SKV RKI V
Sbjct: 567 EEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITV 626
Query: 596 RDNMRFHHFLNGACSCGDFW 615
RD RFHHF +G+CSC D+W
Sbjct: 627 RDRKRFHHFQDGSCSCMDYW 646
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 445 bits (1144), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/555 (40%), Positives = 347/555 (62%), Gaps = 7/555 (1%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT-- 122
+ LF + + N L +A+ Y +G EAL ++ M + + P + + S+ +
Sbjct: 291 KRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL 350
Query: 123 -NLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
N+ G H + L GF S + N +I MY+K D+A ++FD M + VV+W ++
Sbjct: 351 RNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIV 410
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLR-EAGMETDE 240
Y NG++++A E F+ + K+ V+W +++G Q ++ +EA+E F ++ + G+ D
Sbjct: 411 AGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADG 470
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
VT+ SAC LGA A W+ E +G +V +G+ LVDM+S+CG+ E A ++F
Sbjct: 471 VTMMSIASACGHLGALDLAKWIYYYIEKNGI--QLDVRLGTTLVDMFSRCGDPESAMSIF 528
Query: 301 RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVD 360
+ R+ +++ I A+ G A AI+LF +M+E +KP+ V FVG L AC+H GLV
Sbjct: 529 NSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQ 588
Query: 361 QGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGA 420
QG+ +F +M +GV P HY CM DLLGRAG LE+A+QL+E MP+EPN +W +LL A
Sbjct: 589 QGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAA 648
Query: 421 SHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNP 480
V GN ++A + + L P G+Y+LLSN YASAGRW+D+++VR M++K L+K P
Sbjct: 649 CRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPP 708
Query: 481 GYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEK 540
G S ++ R G HEF +GD HPE+ I+ LD++ +R +G++P+LS+V D+ +KEK
Sbjct: 709 GTSSIQIR-GKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEK 767
Query: 541 RFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMR 600
F+L HSEKLA+A+GL++++ G+TI+I+KNLR+C DCH ASKV R+I++RDN R
Sbjct: 768 IFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNR 827
Query: 601 FHHFLNGACSCGDFW 615
FH+ G CSCGDFW
Sbjct: 828 FHYIRQGKCSCGDFW 842
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 160/346 (46%), Gaps = 37/346 (10%)
Query: 14 SILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPS 73
S L C T+ K H + + L IT L+ + S+ + +F S
Sbjct: 37 SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVAR-SCELGTRESLSFAKEVFENSES 95
Query: 74 PNP-FLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL---GTQ 129
F+Y++LIR Y G EA+ L+ M N I+P +TF SA G Q
Sbjct: 96 YGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQ 155
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGD 189
+H + +G+A D+FV N+++ Y + G LDSARKVFDEM +R+VVSWT +I YAR
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 190 MNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISA 249
A +L FFR +R+ + + VT+ ISA
Sbjct: 216 AKDAVDL------------------------------FFRMVRDEEVTPNSVTMVCVISA 245
Query: 250 CAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAF 309
CA+L + + V +SG N L+ SALVDMY KC ++ A +F N
Sbjct: 246 CAKLEDLETGEKVYAFIRNSGI--EVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLD 303
Query: 310 TYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTH 355
++M + G R A+ +F M+++ ++P+ ++ + + +C+
Sbjct: 304 LCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 182/418 (43%), Gaps = 62/418 (14%)
Query: 27 QLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIRAY 86
Q+H I + + + N L H L R +F ++ N ++++I Y
Sbjct: 155 QIHGLIVKMG-YAKDLFVQNSLVHFYAECGEL---DSARKVFDEMSERNVVSWTSMICGY 210
Query: 87 TLRGPFTEALRLYTSM-RNQRITPISFTFSALFSA---VTNLTLGTQLHAHALLLGFASD 142
R +A+ L+ M R++ +TP S T + SA + +L G +++A G +
Sbjct: 211 ARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVN 270
Query: 143 IFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDV 202
+ + ++ MY+K +D A++ LFDE
Sbjct: 271 DLMVSALVDMYMKCNAIDVAKR-------------------------------LFDEYGA 299
Query: 203 KDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWV 262
+ AM + Y + + +EAL F + ++G+ D +++ AIS+C+QL ++ W
Sbjct: 300 SNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL---RNILWG 356
Query: 263 RCI---AESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFA 319
+ +GF N+ +AL+DMY KC + A+ +F M + T++S++ G+
Sbjct: 357 KSCHGYVLRNGFESWDNIC--NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYV 414
Query: 320 IHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSA 379
+G AA +E ET + N V++ ++ L ++ +F +M+ GV +A
Sbjct: 415 ENGEVDAA----WETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV--NA 468
Query: 380 DHYACMADLLGRAGHLEKALQLVETM--PVEPNGAVWGALLGASHVH-----GNPDVA 430
D M+ + GHL AL L + + +E NG LG + V G+P+ A
Sbjct: 469 DGVTMMS-IASACGHL-GALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESA 524
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 108/200 (54%), Gaps = 7/200 (3%)
Query: 173 DVVSWTELITAYARNGDMNS---ARELFDELDVKDKV-AWTAMVTGYAQNAMPKEALEFF 228
DV + T+L+ G S A+E+F+ + + +++ GYA + + EA+ F
Sbjct: 63 DVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLF 122
Query: 229 RCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYS 288
+ +G+ D+ T +SACA+ A + + + G+ A+++ V ++LV Y+
Sbjct: 123 LRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGY--AKDLFVQNSLVHFYA 180
Query: 289 KCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEML-ETEIKPNHVTFV 347
+CG ++ A VF M ERN +++SMI G+A A+ A+ LF+ M+ + E+ PN VT V
Sbjct: 181 ECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMV 240
Query: 348 GVLVACTHAGLVDQGQYLFS 367
V+ AC ++ G+ +++
Sbjct: 241 CVISACAKLEDLETGEKVYA 260
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 444 bits (1143), Expect = e-125, Method: Compositional matrix adjust.
Identities = 243/678 (35%), Positives = 383/678 (56%), Gaps = 85/678 (12%)
Query: 14 SILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPS 73
S++++ T + KQ+HA + L S ++IT L+ H +++F + ++ R +F +P
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLI-HASSSFGDI---TFARQVFDDLPR 81
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALF---SAVTNLTLGTQL 130
P F ++A+IR Y+ F +AL +Y++M+ R++P SFTF L S +++L +G +
Sbjct: 82 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 141
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDS----------------------------- 161
HA LGF +D+FV N +I +Y K L S
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 201
Query: 162 ----ARKVFDEMPQRDVV-SWTELI----------------------------------- 181
A ++F +M + DV W L+
Sbjct: 202 EPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 261
Query: 182 ---TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET 238
T YA+ G + +A+ LFD++ + + W AM++GYA+N +EA++ F + +
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321
Query: 239 DEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARN-VLVGSALVDMYSKCGNVEEAY 297
D +++ AISACAQ+G+ + A R + E G R+ V + SAL+DM++KCG+VE A
Sbjct: 322 DTISITSAISACAQVGSLEQA---RSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR 378
Query: 298 NVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAG 357
VF +R+ +S+MIVG+ +HGRAR AI L+ M + PN VTF+G+L+AC H+G
Sbjct: 379 LVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSG 438
Query: 358 LVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGAL 417
+V +G + F+ M + + P HYAC+ DLLGRAGHL++A ++++ MPV+P VWGAL
Sbjct: 439 MVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGAL 497
Query: 418 LGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLK 477
L A H + ++ E ++ LF ++P+N G+Y+ LSN YA+A WD V+ VR M++K L
Sbjct: 498 LSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLN 557
Query: 478 KNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGD 537
K+ G SWVE R G + F GD HP EI++ ++ + RLK G++ N + +D+ D
Sbjct: 558 KDVGCSWVEVR-GRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLND 616
Query: 538 KEKRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRD 597
+E L +HSE++A+A+GL++T G+ ++I KNLR C +CH SK+ R+IVVRD
Sbjct: 617 EEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRD 676
Query: 598 NMRFHHFLNGACSCGDFW 615
RFHHF +G CSCGD+W
Sbjct: 677 TNRFHHFKDGVCSCGDYW 694
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 174/426 (40%), Gaps = 90/426 (21%)
Query: 98 LYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSG 157
LYT N I SF +++L + T+ Q+HA L+LG F+ +I G
Sbjct: 12 LYT---NSGIHSDSF-YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFG 67
Query: 158 CLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVK----DKVAWTAMVT 213
+ AR+VFD++P+ + W +I Y+RN A ++ + + D + ++
Sbjct: 68 DITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLK 127
Query: 214 ---------------------GYAQNAMPKEAL--EFFRCLREAGMET----------DE 240
G+ + + L + +C R T
Sbjct: 128 ACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTI 187
Query: 241 VTLAGAISACAQLGASKDA--------------DWVRCIAESSGFGPARNVLVGS----- 281
V+ +SA AQ G +A DWV ++ + F +++ G
Sbjct: 188 VSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHAS 247
Query: 282 --------------ALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAA 327
+L MY+KCG V A +F MK N +++MI G+A +G AR A
Sbjct: 248 VVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREA 307
Query: 328 IKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHY----- 382
I +F+EM+ +++P+ ++ + AC G ++Q + + Y V +D+
Sbjct: 308 IDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSM-------YEYVGRSDYRDDVFI 360
Query: 383 -ACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFE-- 439
+ + D+ + G +E A +LV ++ + VW A++ +HG A + R +
Sbjct: 361 SSALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGG 419
Query: 440 LEPNNI 445
+ PN++
Sbjct: 420 VHPNDV 425
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 440 bits (1131), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/554 (40%), Positives = 346/554 (62%), Gaps = 7/554 (1%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT-- 122
+ LF + + N L +A+ Y +G EAL ++ M + + P + + S+ +
Sbjct: 291 KRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL 350
Query: 123 -NLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
N+ G H + L GF S + N +I MY+K D+A ++FD M + VV+W ++
Sbjct: 351 RNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIV 410
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLR-EAGMETDE 240
Y NG++++A E F+ + K+ V+W +++G Q ++ +EA+E F ++ + G+ D
Sbjct: 411 AGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADG 470
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
VT+ SAC LGA A W+ E +G +V +G+ LVDM+S+CG+ E A ++F
Sbjct: 471 VTMMSIASACGHLGALDLAKWIYYYIEKNGI--QLDVRLGTTLVDMFSRCGDPESAMSIF 528
Query: 301 RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVD 360
+ R+ +++ I A+ G A AI+LF +M+E +KP+ V FVG L AC+H GLV
Sbjct: 529 NSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQ 588
Query: 361 QGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGA 420
QG+ +F +M +GV P HY CM DLLGRAG LE+A+QL+E MP+EPN +W +LL A
Sbjct: 589 QGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAA 648
Query: 421 SHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNP 480
V GN ++A + + L P G+Y+LLSN YASAGRW+D+++VR M++K L+K P
Sbjct: 649 CRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPP 708
Query: 481 GYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEK 540
G S ++ R G HEF +GD HPE+ I+ LD++ +R +G++P+LS+V D+ +KEK
Sbjct: 709 GTSSIQIR-GKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEK 767
Query: 541 RFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMR 600
F+L HSEKLA+A+GL++++ G+TI+I+KNLR+C DCH ASKV R+I++RDN R
Sbjct: 768 IFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNR 827
Query: 601 FHHFLNGACSCGDF 614
FH+ G CSCGDF
Sbjct: 828 FHYIRQGKCSCGDF 841
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 160/346 (46%), Gaps = 37/346 (10%)
Query: 14 SILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPS 73
S L C T+ K H + + L IT L+ + S+ + +F S
Sbjct: 37 SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVAR-SCELGTRESLSFAKEVFENSES 95
Query: 74 -PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL---GTQ 129
F+Y++LIR Y G EA+ L+ M N I+P +TF SA G Q
Sbjct: 96 YGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQ 155
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGD 189
+H + +G+A D+FV N+++ Y + G LDSARKVFDEM +R+VVSWT +I YAR
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 190 MNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISA 249
A +L FFR +R+ + + VT+ ISA
Sbjct: 216 AKDAVDL------------------------------FFRMVRDEEVTPNSVTMVCVISA 245
Query: 250 CAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAF 309
CA+L + + V +SG N L+ SALVDMY KC ++ A +F N
Sbjct: 246 CAKLEDLETGEKVYAFIRNSGI--EVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLD 303
Query: 310 TYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTH 355
++M + G R A+ +F M+++ ++P+ ++ + + +C+
Sbjct: 304 LCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 182/418 (43%), Gaps = 62/418 (14%)
Query: 27 QLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIRAY 86
Q+H I + + + N L H L R +F ++ N ++++I Y
Sbjct: 155 QIHGLIVKMG-YAKDLFVQNSLVHFYAECGEL---DSARKVFDEMSERNVVSWTSMICGY 210
Query: 87 TLRGPFTEALRLYTSM-RNQRITPISFTFSALFSA---VTNLTLGTQLHAHALLLGFASD 142
R +A+ L+ M R++ +TP S T + SA + +L G +++A G +
Sbjct: 211 ARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVN 270
Query: 143 IFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDV 202
+ + ++ MY+K +D A++ LFDE
Sbjct: 271 DLMVSALVDMYMKCNAIDVAKR-------------------------------LFDEYGA 299
Query: 203 KDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWV 262
+ AM + Y + + +EAL F + ++G+ D +++ AIS+C+QL ++ W
Sbjct: 300 SNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL---RNILWG 356
Query: 263 RCI---AESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFA 319
+ +GF N+ +AL+DMY KC + A+ +F M + T++S++ G+
Sbjct: 357 KSCHGYVLRNGFESWDNIC--NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYV 414
Query: 320 IHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSA 379
+G AA +E ET + N V++ ++ L ++ +F +M+ GV +A
Sbjct: 415 ENGEVDAA----WETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV--NA 468
Query: 380 DHYACMADLLGRAGHLEKALQLVETM--PVEPNGAVWGALLGASHVH-----GNPDVA 430
D M+ + GHL AL L + + +E NG LG + V G+P+ A
Sbjct: 469 DGVTMMS-IASACGHL-GALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESA 524
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 108/200 (54%), Gaps = 7/200 (3%)
Query: 173 DVVSWTELITAYARNGDMNS---ARELFDELDVKDKV-AWTAMVTGYAQNAMPKEALEFF 228
DV + T+L+ G S A+E+F+ + + +++ GYA + + EA+ F
Sbjct: 63 DVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLF 122
Query: 229 RCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYS 288
+ +G+ D+ T +SACA+ A + + + G+ A+++ V ++LV Y+
Sbjct: 123 LRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGY--AKDLFVQNSLVHFYA 180
Query: 289 KCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEML-ETEIKPNHVTFV 347
+CG ++ A VF M ERN +++SMI G+A A+ A+ LF+ M+ + E+ PN VT V
Sbjct: 181 ECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMV 240
Query: 348 GVLVACTHAGLVDQGQYLFS 367
V+ AC ++ G+ +++
Sbjct: 241 CVISACAKLEDLETGEKVYA 260
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 437 bits (1124), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/557 (40%), Positives = 338/557 (60%), Gaps = 20/557 (3%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL 124
R F + + ++ +I Y G EA +L+ Q + FT++A+ S
Sbjct: 239 RQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV----FTWTAMVSGYIQN 294
Query: 125 TLGTQLHAHALLLGFASDIFVN-NTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
+ + A L V+ N M+ YV+ ++ A+++FD MP R+V +W +IT
Sbjct: 295 RMVEE--ARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITG 352
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
YA+ G ++ A+ LFD++ +D V+W AM+ GY+Q+ EAL F + G + +
Sbjct: 353 YAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSF 412
Query: 244 AGAISACA-----QLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYN 298
+ A+S CA +LG V+ E+ F VG+AL+ MY KCG++EEA +
Sbjct: 413 SSALSTCADVVALELGKQLHGRLVKGGYETGCF-------VGNALLLMYCKCGSIEEAND 465
Query: 299 VFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGL 358
+F+ M ++ ++++MI G++ HG A++ F M +KP+ T V VL AC+H GL
Sbjct: 466 LFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGL 525
Query: 359 VDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALL 418
VD+G+ F M YGV+P++ HYACM DLLGRAG LE A L++ MP EP+ A+WG LL
Sbjct: 526 VDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL 585
Query: 419 GASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKK 478
GAS VHGN ++AE + +F +EP N G Y+LLSN YAS+GRW DV ++R MRDK +KK
Sbjct: 586 GASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKK 645
Query: 479 NPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDK 538
PGYSW+E +N H F GD HPE +EI L++L R+K GY+ S V +D+ ++
Sbjct: 646 VPGYSWIEIQNKT-HTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEE 704
Query: 539 EKRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDN 598
EK ++ HSE+LA+A+G++ +G I+++KNLR+CEDCH + +++TGR I++RDN
Sbjct: 705 EKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDN 764
Query: 599 MRFHHFLNGACSCGDFW 615
RFHHF +G+CSCGD+W
Sbjct: 765 NRFHHFKDGSCSCGDYW 781
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 167/372 (44%), Gaps = 60/372 (16%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL 124
R +F ++P N ++AL+ AY EA L+ S N AL S
Sbjct: 177 RSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENW----------ALVSW---- 222
Query: 125 TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAY 184
N ++ +VK + AR+ FD M RDVVSW +IT Y
Sbjct: 223 ----------------------NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGY 260
Query: 185 ARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLA 244
A++G ++ AR+LFDE V+D WTAMV+GY QN M +EA E F D++
Sbjct: 261 AQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELF----------DKMPER 310
Query: 245 GAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK 304
+S A L + + E P RNV + ++ Y++CG + EA N+F M
Sbjct: 311 NEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP 370
Query: 305 ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQY 364
+R+ ++++MI G++ G + A++LF +M + N +F L C ++ G+
Sbjct: 371 KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQ 430
Query: 365 LFSNM------EGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALL 418
L + GC+ V +A + + + G +E+A L + M + + W ++
Sbjct: 431 LHGRLVKGGYETGCF--VGNA-----LLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMI 482
Query: 419 GASHVHGNPDVA 430
HG +VA
Sbjct: 483 AGYSRHGFGEVA 494
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 180/424 (42%), Gaps = 69/424 (16%)
Query: 23 RRAKQLHAHIYRHNLHQSSYIITN-LLRHLTTTFPHLPIHSYPRLLFSQVPSPN--PFL- 78
RRA+QLH Y N L R HS R +Q+ P L
Sbjct: 11 RRAQQLH------------YTSLNGLKRRCNNAHGAANFHSLKRATQTQIQKSQTKPLLK 58
Query: 79 --------YSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQL 130
++ I +Y G EALR++ M R + +S+ + + S L G
Sbjct: 59 CGDSDIKEWNVAISSYMRTGRCNEALRVFKRM--PRWSSVSY--NGMISGY--LRNGEFE 112
Query: 131 HAHALLLGFAS-DIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGD 189
A L D+ N MIK YV++ L AR++F+ MP+RDV SW +++ YA+NG
Sbjct: 113 LARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGC 172
Query: 190 MNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISA 249
++ AR +FD + K+ V+W A+++ Y QN+ +EA F+ + + L G +
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKK 232
Query: 250 CAQLGASKDAD---------WVRCIAESSGFG------------PARNVLVGSALVDMYS 288
+ A + D W I + G P ++V +A+V Y
Sbjct: 233 KKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYI 292
Query: 289 KCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKP--NHVTF 346
+ VEEA +F M ERN ++++M+ G+ R A +LF ++ P N T+
Sbjct: 293 QNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELF------DVMPCRNVSTW 346
Query: 347 VGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSAD--HYACMADLLGRAGHLEKALQLVET 404
++ G + + + LF M P D +A M ++GH +AL+L
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKM-------PKRDPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 405 MPVE 408
M E
Sbjct: 400 MERE 403
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 167/347 (48%), Gaps = 34/347 (9%)
Query: 141 SDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDEL 200
SDI N I Y+++G + A +VF MP+ VS+ +I+ Y RNG+ AR+LFDE+
Sbjct: 62 SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM 121
Query: 201 DVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDAD 260
+D V+W M+ GY +N +A E F + E D + +S AQ G DA
Sbjct: 122 PERDLVSWNVMIKGYVRNRNLGKARELFEIMP----ERDVCSWNTMLSGYAQNGCVDDA- 176
Query: 261 WVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAI 320
R + + P +N + +AL+ Y + +EEA +F+ + +++ ++ GF
Sbjct: 177 --RSVFDRM---PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVK 231
Query: 321 HGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSAD 380
+ A + F M ++ V++ ++ +G +D+ + LF P D
Sbjct: 232 KKKIVEARQFFDSMNVRDV----VSWNTIITGYAQSGKIDEARQLFDE-------SPVQD 280
Query: 381 HYACMADLLGRAGH--LEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLF 438
+ A + G + +E+A +L + MP E N W A+L A +V G + E+ ++ LF
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELFDKMP-ERNEVSWNAML-AGYVQG--ERMEM-AKELF 335
Query: 439 ELEP-NNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSW 484
++ P N+ + + YA G+ +S + L DK K++P SW
Sbjct: 336 DVMPCRNVSTWNTMITGYAQCGK---ISEAKNLF-DKMPKRDP-VSW 377
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/609 (37%), Positives = 355/609 (58%), Gaps = 12/609 (1%)
Query: 13 VSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVP 72
+++L++ T + +Q+HA +Y + +++ + ++ + + H + Y + +
Sbjct: 10 IALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALS-DHKYL-DYANQILDRSE 67
Query: 73 SPNPFLYSALIRAYTLRGPFTE-ALRLYTSM--RNQRITPISFTFSALFSAVTNLTL--- 126
P F +++IRA+ + P E + Y + + P ++T + L A T L +
Sbjct: 68 KPTLFALNSMIRAHC-KSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRET 126
Query: 127 GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYAR 186
G Q+H + GF +D V +I +Y + GCLDS KVF+ +P D V T ++TA AR
Sbjct: 127 GLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACAR 186
Query: 187 NGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGA 246
GD+ AR+LF+ + +D +AW AM++GYAQ +EAL F ++ G++ + V +
Sbjct: 187 CGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISV 246
Query: 247 ISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER 306
+SAC QLGA W E + V + + LVD+Y+KCG++E+A VF GM+E+
Sbjct: 247 LSACTQLGALDQGRWAHSYIERNKI--KITVRLATTLVDLYAKCGDMEKAMEVFWGMEEK 304
Query: 307 NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLF 366
N +T+SS + G A++G ++LF M + + PN VTFV VL C+ G VD+GQ F
Sbjct: 305 NVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHF 364
Query: 367 SNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGN 426
+M +G+ P +HY C+ DL RAG LE A+ +++ MP++P+ AVW +LL AS ++ N
Sbjct: 365 DSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKN 424
Query: 427 PDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVE 486
++ + S+ + ELE N G Y+LLSN YA + WD+VS VR+ M+ K ++K PG S +E
Sbjct: 425 LELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVME 484
Query: 487 SRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFLLMA 546
NG +HEF GD HP+ +I D+ RL+ GY + + V +DI ++EK L
Sbjct: 485 V-NGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCL 543
Query: 547 HSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFLN 606
HSEK A+AFG+++ I+I+KNLR+C DCH V SK+ R+I+VRD RFHHF +
Sbjct: 544 HSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKD 603
Query: 607 GACSCGDFW 615
G CSC FW
Sbjct: 604 GHCSCNGFW 612
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 435 bits (1118), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/613 (37%), Positives = 356/613 (58%), Gaps = 42/613 (6%)
Query: 11 QVVSILNT--CTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLF 68
+ +++L T +++ + +Q+HA RH + S + L + P P SY +F
Sbjct: 17 KCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVF 76
Query: 69 SQVPSP-NPFLYSALIRAYTLRGPFTEALRLYTSMR-NQRITPISFTFSALFSAVTNLT- 125
S++ P N F+++ LIR Y G A LY MR + + P + T+ L AVT +
Sbjct: 77 SKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMAD 136
Query: 126 --LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
LG +H+ + GF S I+V N+++ +Y
Sbjct: 137 VRLGETIHSVVIRSGFGSLIYVQNSLLHLY------------------------------ 166
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
A GD+ SA ++FD++ KD VAW +++ G+A+N P+EAL + + G++ D T+
Sbjct: 167 -ANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 225
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
+SACA++GA V G RN+ + L+D+Y++CG VEEA +F M
Sbjct: 226 VSLLSACAKIGALTLGKRVHVYMIKVGL--TRNLHSSNVLLDLYARCGRVEEAKTLFDEM 283
Query: 304 KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETE-IKPNHVTFVGVLVACTHAGLVDQG 362
++N+ +++S+IVG A++G + AI+LF M TE + P +TFVG+L AC+H G+V +G
Sbjct: 284 VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG 343
Query: 363 QYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASH 422
F M Y + P +H+ CM DLL RAG ++KA + +++MP++PN +W LLGA
Sbjct: 344 FEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACT 403
Query: 423 VHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGY 482
VHG+ D+AE + +LEPN+ G+Y+LLSN YAS RW DV ++RK M +KK PG+
Sbjct: 404 VHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGH 463
Query: 483 SWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRF 542
S VE N V HEFL GD HP+ + I L ++ RL++ GY+P +S+V D+ ++EK
Sbjct: 464 SLVEVGNRV-HEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKEN 522
Query: 543 LLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFH 602
++ HSEK+A+AF L++T S I ++KNLR+C DCH+ + SKV R+IVVRD RFH
Sbjct: 523 AVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFH 582
Query: 603 HFLNGACSCGDFW 615
HF NG+CSC D+W
Sbjct: 583 HFKNGSCSCQDYW 595
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 435 bits (1118), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/563 (37%), Positives = 338/563 (60%), Gaps = 12/563 (2%)
Query: 62 SYPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA- 120
+Y R +F ++ + ++ +I Y G EA +L+ M++ + P + SA
Sbjct: 163 NYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSAC 222
Query: 121 --VTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWT 178
N+ ++ + D + ++ MY +GC+D AR+ F +M R++ T
Sbjct: 223 GRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVST 282
Query: 179 ELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET 238
+++ Y++ G ++ A+ +FD+ + KD V WT M++ Y ++ P+EAL F + +G++
Sbjct: 283 AMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKP 342
Query: 239 DEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYN 298
D V++ ISACA LG A WV +G + + +AL++MY+KCG ++ +
Sbjct: 343 DVVSMFSVISACANLGILDKAKWVHSCIHVNGL--ESELSINNALINMYAKCGGLDATRD 400
Query: 299 VFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGL 358
VF M RN ++SSMI ++HG A A+ LF M + ++PN VTFVGVL C+H+GL
Sbjct: 401 VFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGL 460
Query: 359 VDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALL 418
V++G+ +F++M Y + P +HY CM DL GRA L +AL+++E+MPV N +WG+L+
Sbjct: 461 VEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLM 520
Query: 419 GASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKK 478
A +HG ++ + ++ + ELEP++ G +L+SN YA RW+DV +R++M +KN+ K
Sbjct: 521 SACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFK 580
Query: 479 NPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDK 538
G S ++ +NG HEFL GD +H + NEI LD+++ +LK GY+P+ SV D+ ++
Sbjct: 581 EKGLSRID-QNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEE 639
Query: 539 EKRFLLMAHSEKLALAFGLLN------TDAGSTIKIMKNLRICEDCHIVMCGASKVTGRK 592
EK+ L++ HSEKLAL FGL+N D+ I+I+KNLR+CEDCH+ SKV R+
Sbjct: 640 EKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYERE 699
Query: 593 IVVRDNMRFHHFLNGACSCGDFW 615
I+VRD RFH + NG CSC D+W
Sbjct: 700 IIVRDRTRFHCYKNGLCSCRDYW 722
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 208/450 (46%), Gaps = 34/450 (7%)
Query: 12 VVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
++ L+ C +L KQLHAHI R ++ N + SY +FS +
Sbjct: 15 ILEKLSFCKSLNHIKQLHAHILRTVINHK----LNSFLFNLSVSSSSINLSYALNVFSSI 70
Query: 72 PSP------NPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT 125
PSP NPFL L R+ R + Y +R+ F+F + AV+ ++
Sbjct: 71 PSPPESIVFNPFLRD-LSRSSEPRA----TILFYQRIRHVGGRLDQFSFLPILKAVSKVS 125
Query: 126 L---GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELIT 182
G +LH A + D FV + MY G ++ AR VFDEM RDVV+W +I
Sbjct: 126 ALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIE 185
Query: 183 AYARNGDMNSARELFDELD----VKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET 238
Y R G ++ A +LF+E+ + D++ +V+ + + + L E +
Sbjct: 186 RYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRM 245
Query: 239 DEVTLAGAISACAQLGASKDA-DWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAY 297
D L ++ A G A ++ R ++ RN+ V +A+V YSKCG +++A
Sbjct: 246 DTHLLTALVTMYAGAGCMDMAREFFRKMS-------VRNLFVSTAMVSGYSKCGRLDDAQ 298
Query: 298 NVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAG 357
+F ++++ +++MI + + A+++F EM + IKP+ V+ V+ AC + G
Sbjct: 299 VIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLG 358
Query: 358 LVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGAL 417
++D+ +++ S + G+ + ++ + G L+ + E MP N W ++
Sbjct: 359 ILDKAKWVHSCIH-VNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSM 416
Query: 418 LGASHVHGN-PDVAEIVSRHLFE-LEPNNI 445
+ A +HG D + +R E +EPN +
Sbjct: 417 INALSMHGEASDALSLFARMKQENVEPNEV 446
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 434 bits (1116), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/555 (39%), Positives = 340/555 (61%), Gaps = 10/555 (1%)
Query: 68 FSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSM-RNQRITPISFTFSALFSAVTNLT- 125
F Q+ + ++++I + RG AL +++ M R+ ++P FT +++ SA NL
Sbjct: 235 FEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEK 294
Query: 126 --LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRD--VVSWTELI 181
+G Q+H+H + GF V N +I MY + G +++AR++ ++ +D + +T L+
Sbjct: 295 LCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALL 354
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
Y + GDMN A+ +F L +D VAWTAM+ GY Q+ EA+ FR + G +
Sbjct: 355 DGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSY 414
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
TLA +S + L + + A SG +V V +AL+ MY+K GN+ A F
Sbjct: 415 TLAAMLSVASSLASLSHGKQIHGSAVKSG--EIYSVSVSNALITMYAKAGNITSASRAFD 472
Query: 302 GMK-ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVD 360
++ ER+ +++SMI+ A HG A A++LF ML ++P+H+T+VGV ACTHAGLV+
Sbjct: 473 LIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVN 532
Query: 361 QGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGA 420
QG+ F M+ ++P+ HYACM DL GRAG L++A + +E MP+EP+ WG+LL A
Sbjct: 533 QGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
Query: 421 SHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNP 480
VH N D+ ++ + L LEP N G Y L+N Y++ G+W++ +++RK M+D +KK
Sbjct: 593 CRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQ 652
Query: 481 GYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEK 540
G+SW+E ++ V H F D HPE NEI + + + +K +GY+P+ +SV +D+ ++ K
Sbjct: 653 GFSWIEVKHKV-HVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVK 711
Query: 541 RFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMR 600
+L HSEKLA+AFGL++T +T++IMKNLR+C DCH + SK+ GR+I+VRD R
Sbjct: 712 EQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTR 771
Query: 601 FHHFLNGACSCGDFW 615
FHHF +G CSC D+W
Sbjct: 772 FHHFKDGFCSCRDYW 786
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/537 (24%), Positives = 237/537 (44%), Gaps = 81/537 (15%)
Query: 14 SILNTCTTLRR-----------AKQLHAHIYRHNLHQSSYIITNLLR---------HLTT 53
++L CT L + A+ +H + + L S Y++ NL+ H
Sbjct: 11 TLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARK 70
Query: 54 TFPHLPIHS----------YPRL--------LFSQVPSPNPFLYSALIRAYTLRGPFTEA 95
F +P+ + Y + F Q+P + ++ +I Y G + +A
Sbjct: 71 LFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKA 130
Query: 96 LRLYTSMRNQRITPISFTFSALFSAVTN---LTLGTQLHAHALLLGFASDIFVNNTMIKM 152
+R+ M + I P FT + + ++V + G ++H+ + LG ++ V+N+++ M
Sbjct: 131 IRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNM 190
Query: 153 YVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMV 212
Y K G A+ VFD M RD+ SW +I + + G M+ A F+++ +D V W +M+
Sbjct: 191 YAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMI 250
Query: 213 TGYAQNAMPKEALEFF-RCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGF 271
+G+ Q AL+ F + LR++ + D TLA +SACA L + ++GF
Sbjct: 251 SGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGF 310
Query: 272 GPARNVLVGSALVDMYSKCGNVE---------------------------------EAYN 298
+ VL +AL+ MYS+CG VE +A N
Sbjct: 311 DISGIVL--NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKN 368
Query: 299 VFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGL 358
+F +K+R+ +++MIVG+ HG AI LF M+ +PN T +L +
Sbjct: 369 IFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLAS 428
Query: 359 VDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALL 418
+ G+ + + G + S + + +AG++ A + + + E + W +++
Sbjct: 429 LSHGKQIHGSAVKS-GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMI 487
Query: 419 GASHVHGNPDVA-EIVSRHLFE-LEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRD 473
A HG+ + A E+ L E L P++I Y+ + + AG + + +M+D
Sbjct: 488 IALAQHGHAEEALELFETMLMEGLRPDHI-TYVGVFSACTHAGLVNQGRQYFDMMKD 543
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 154/342 (45%), Gaps = 54/342 (15%)
Query: 109 PISFTFSALFSAVTNL----------TLGTQL-HAHALLLGFASDIFVNNTMIKMYVKSG 157
P+ + S L TNL QL H + G +++ N ++ +Y K+G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 158 CLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQ 217
ARK+FDEMP R SW +++AY++ GDM+S E FD+L +D V+WT M+ GY
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 218 NAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNV 277
+A+ + + G+E + TL +++ A + V G NV
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVK--LGLRGNV 181
Query: 278 LVGSALVDMYSKCGN-------------------------------VEEAYNVFRGMKER 306
V ++L++MY+KCG+ ++ A F M ER
Sbjct: 182 SVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAER 241
Query: 307 NAFTYSSMIVGFAIHGRARAAIKLFYEML-ETEIKPNHVTFVGVLVACTHAGLVDQGQYL 365
+ T++SMI GF G A+ +F +ML ++ + P+ T VL AC + + G+ +
Sbjct: 242 DIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQI 301
Query: 366 FSNME----GCYGVVPSADHYACMADLLGRAGHLEKALQLVE 403
S++ G+V +A + + R G +E A +L+E
Sbjct: 302 HSHIVTTGFDISGIVLNA-----LISMYSRCGGVETARRLIE 338
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 432 bits (1112), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/552 (40%), Positives = 337/552 (61%), Gaps = 16/552 (2%)
Query: 77 FLYSALIRA--YTLRGPFTEA-LRLYTSMRNQRITPISFTFSALFSAVTN---LTLGTQL 130
FL++ +IRA + + P + + +Y MRN R++P TF L + N L LG +
Sbjct: 25 FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRT 84
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDM 190
HA LL G D FV +++ MY G L SA++VFD+ +D+ +W ++ AYA+ G +
Sbjct: 85 HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144
Query: 191 NSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLR-----EAGMETDEVTLAG 245
+ AR+LFDE+ ++ ++W+ ++ GY KEAL+ FR ++ EA + +E T++
Sbjct: 145 DDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMST 204
Query: 246 AISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM-K 304
+SAC +LGA + WV A + ++++G+AL+DMY+KCG++E A VF +
Sbjct: 205 VLSACGRLGALEQGKWVH--AYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS 262
Query: 305 ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETE-IKPNHVTFVGVLVACTHAGLVDQGQ 363
+++ YS+MI A++G +LF EM ++ I PN VTFVG+L AC H GL+++G+
Sbjct: 263 KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGK 322
Query: 364 YLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHV 423
F M +G+ PS HY CM DL GR+G +++A + +MP+EP+ +WG+LL S +
Sbjct: 323 SYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRM 382
Query: 424 HGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYS 483
G+ E + L EL+P N G Y+LLSN YA GRW +V +R M K + K PG S
Sbjct: 383 LGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCS 442
Query: 484 WVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFL 543
+VE GV+HEF+ GD E I LD++++RL+ GY+ + V D+ +K+K
Sbjct: 443 YVEV-EGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIA 501
Query: 544 LMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHH 603
L HSEKLA+AF L+ T G+ ++I+KNLRIC DCH+VM SK+ R+IVVRD RFHH
Sbjct: 502 LSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHH 561
Query: 604 FLNGACSCGDFW 615
F +G+CSC DFW
Sbjct: 562 FRDGSCSCRDFW 573
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 431 bits (1107), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/541 (40%), Positives = 323/541 (59%), Gaps = 8/541 (1%)
Query: 79 YSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN---LTLGTQLHAHAL 135
Y+A+I Y RG + EAL + M + I FT+ ++ A L LG Q+HA+ L
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL 313
Query: 136 LLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARE 195
S F +N+++ +Y K G D AR +F++MP +D+VSW L++ Y +G + A+
Sbjct: 314 RREDFSFHF-DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL 372
Query: 196 LFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGA 255
+F E+ K+ ++W M++G A+N +E L+ F C++ G E + +GAI +CA LGA
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432
Query: 256 SKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMI 315
+ GF + + G+AL+ MY+KCG VEEA VFR M ++ +++++I
Sbjct: 433 YCNGQQYHAQLLKIGFDSSLSA--GNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALI 490
Query: 316 VGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGV 375
HG A+ ++ EML+ I+P+ +T + VL AC+HAGLVDQG+ F +ME Y +
Sbjct: 491 AALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRI 550
Query: 376 VPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSR 435
P ADHYA + DLL R+G A ++E++P +P +W ALL VHGN ++ I +
Sbjct: 551 PPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAAD 610
Query: 436 HLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEF 495
LF L P + G Y+LLSN +A+ G+W++V+RVRKLMRD+ +KK SW+E V H F
Sbjct: 611 KLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQV-HTF 669
Query: 496 LAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDI-GDKEKRFLLMAHSEKLALA 554
L D HPE + L DL + ++ +GY+P+ S V +D+ D K +L HSEK+A+A
Sbjct: 670 LVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVA 729
Query: 555 FGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFLNGACSCGDF 614
FGL+ G+TI+I KNLR C DCH S V R I++RD RFHHF NG CSCG+F
Sbjct: 730 FGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNF 789
Query: 615 W 615
W
Sbjct: 790 W 790
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 134/520 (25%), Positives = 217/520 (41%), Gaps = 89/520 (17%)
Query: 6 RALEWQVVSILNTCTTLRR-----AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPI 60
RA+ + + L C LRR A+ +H +I ++I+ L+ +
Sbjct: 9 RAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLI----DVYCKSSE 64
Query: 61 HSYPRLLFSQVPSPNPFLYSALIRAYTLRGPFT--------------------------- 93
+Y R LF ++ P+ + ++ Y G T
Sbjct: 65 LNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFS 124
Query: 94 ------EALRLYTSMRNQRITPISFTFSALFSAVT----NLTLGTQLHAHALLLGFASDI 143
A+ L+ M+++ P +FTF+++ + + + Q HA AL G
Sbjct: 125 HNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYIT 184
Query: 144 FVNNTMIKMYVKSGC----LDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDE 199
V+N ++ +Y K L SARKVFDE+ ++D SWT ++T Y +NG + EL +
Sbjct: 185 SVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEG 244
Query: 200 LDVKDK-VAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACA-----QL 253
+D K VA+ AM++GY +EALE R + +G+E DE T I ACA QL
Sbjct: 245 MDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQL 304
Query: 254 GASKDA--------------------------DWVRCIAESSGFGPARNVLVGSALVDMY 287
G A D R I E PA++++ +AL+ Y
Sbjct: 305 GKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKM---PAKDLVSWNALLSGY 361
Query: 288 SKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFV 347
G++ EA +F+ MKE+N ++ MI G A +G +KLF M +P F
Sbjct: 362 VSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFS 421
Query: 348 GVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPV 407
G + +C G GQ + + G S + + + G +E+A Q+ TMP
Sbjct: 422 GAIKSCAVLGAYCNGQQYHAQLLK-IGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC 480
Query: 408 EPNGAVWGALLGASHVHGNPDVAEIVSRHLFE--LEPNNI 445
+ W AL+ A HG+ A V + + + P+ I
Sbjct: 481 -LDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRI 519
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/554 (37%), Positives = 322/554 (58%), Gaps = 37/554 (6%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSA---LFSAV 121
R +F +P + Y+ +I Y G + +ALR+ M + P SFT S+ +FS
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 255
Query: 122 TNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
++ G ++H + + G SD+++ ++++ MY K SAR
Sbjct: 256 VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAK-----SAR------------------ 292
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
+ + +F L +D ++W ++V GY QN EAL FR + A ++ V
Sbjct: 293 --------IEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAV 344
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
+ I ACA L + GFG N+ + SALVDMYSKCGN++ A +F
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGS--NIFIASALVDMYSKCGNIKAARKIFD 402
Query: 302 GMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
M + +++++I+G A+HG A+ LF EM +KPN V FV VL AC+H GLVD+
Sbjct: 403 RMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDE 462
Query: 362 GQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGAS 421
F++M YG+ +HYA +ADLLGRAG LE+A + M VEP G+VW LL +
Sbjct: 463 AWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSC 522
Query: 422 HVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPG 481
VH N ++AE V+ +F ++ N+G Y+L+ N YAS GRW +++++R MR K L+K P
Sbjct: 523 SVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPA 582
Query: 482 YSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKR 541
SW+E +N H F++GD HP +++I + L ++E+++ GY+ + S V +D+ ++ KR
Sbjct: 583 CSWIEMKNKT-HGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKR 641
Query: 542 FLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRF 601
LL HSE+LA+AFG++NT+ G+TI++ KN+RIC DCH+ + SK+T R+I+VRDN RF
Sbjct: 642 ELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRF 701
Query: 602 HHFLNGACSCGDFW 615
HHF G CSCGD+W
Sbjct: 702 HHFNRGNCSCGDYW 715
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 115/479 (24%), Positives = 210/479 (43%), Gaps = 99/479 (20%)
Query: 24 RAKQLHAHIYRHNL--HQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSA 81
+AKQLHA R H S+ I+ ++ + +L + LLF + SP + +
Sbjct: 23 QAKQLHAQFIRTQSLSHTSASIVISI-------YTNLKLLHEALLLFKTLKSPPVLAWKS 75
Query: 82 LIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT---NLTLGTQLHAHALLLG 138
+IR +T + F++AL + MR P F ++ + T +L G +H + LG
Sbjct: 76 VIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLG 135
Query: 139 FASDIFVNNTMIKMYVK-----------------------SG--------CL-----DSA 162
D++ N ++ MY K SG C+ DS
Sbjct: 136 MDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSV 195
Query: 163 RKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPK 222
R+VF+ MP++DVVS+ +I YA++G M +
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSG-------------------------------MYE 224
Query: 223 EALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGF----GPARNVL 278
+AL R + ++ D TL+ + ++ D ++ E G+ G +V
Sbjct: 225 DALRMVREMGTTDLKPDSFTLSSVLPIFSEY-----VDVIKG-KEIHGYVIRKGIDSDVY 278
Query: 279 VGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETE 338
+GS+LVDMY+K +E++ VF + R+ +++S++ G+ +GR A++LF +M+ +
Sbjct: 279 IGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAK 338
Query: 339 IKPNHVTFVGVLVACTHAGLVDQGQYLFSN-MEGCYG---VVPSADHYACMADLLGRAGH 394
+KP V F V+ AC H + G+ L + G +G + SA + D+ + G+
Sbjct: 339 VKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASA-----LVDMYSKCGN 393
Query: 395 LEKALQLVETMPVEPNGAVWGALLG-ASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLS 452
++ A ++ + M V + ++G A H HG+ V+ ++PN + +L+
Sbjct: 394 IKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLT 452
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 152/323 (47%), Gaps = 40/323 (12%)
Query: 12 VVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
V+ I + + + K++H ++ R + YI ++L+ + I R+ FS++
Sbjct: 248 VLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKS---ARIEDSERV-FSRL 303
Query: 72 PSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT---LGT 128
+ +++L+ Y G + EALRL+ M ++ P + FS++ A +L LG
Sbjct: 304 YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGK 363
Query: 129 QLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNG 188
QLH + L GF S+IF+ + ++ MY K G + +ARK+FD M D VSWT +I +A +G
Sbjct: 364 QLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHG 423
Query: 189 DMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAIS 248
+ A LF+E ++ G++ ++V ++
Sbjct: 424 HGHEAVSLFEE-------------------------------MKRQGVKPNQVAFVAVLT 452
Query: 249 ACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM-KERN 307
AC+ +G +A W + + +G + + +A+ D+ + G +EEAYN M E
Sbjct: 453 ACSHVGLVDEA-WGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPT 511
Query: 308 AFTYSSMIVGFAIHGRARAAIKL 330
+S+++ ++H A K+
Sbjct: 512 GSVWSTLLSSCSVHKNLELAEKV 534
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 423 bits (1088), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/612 (37%), Positives = 347/612 (56%), Gaps = 46/612 (7%)
Query: 12 VVSILNTCTT---LRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLF 68
VVS+L+ CT R +H++ +H L +S ++N L L F L + +F
Sbjct: 250 VVSLLSACTEAGDFNRGVTIHSYSIKHGL-ESELFVSNKLIDLYAEFGRL---RDCQKVF 305
Query: 69 SQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTF---SALFSAVTNLT 125
++ + ++++I+AY L A+ L+ MR RI P T +++ S + ++
Sbjct: 306 DRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIR 365
Query: 126 LGTQLHAHALLLG-FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAY 184
+ L G F DI + N ++ MY K G +D
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVD------------------------ 401
Query: 185 ARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAG-METDEVTL 243
SAR +F+ L D ++W +++GYAQN EA+E + + E G + ++ T
Sbjct: 402 -------SARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTW 454
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
+ AC+Q GA + ++ G +V V ++L DMY KCG +E+A ++F +
Sbjct: 455 VSVLPACSQAGALRQG--MKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQI 512
Query: 304 KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQ 363
N+ ++++I HG A+ LF EML+ +KP+H+TFV +L AC+H+GLVD+GQ
Sbjct: 513 PRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQ 572
Query: 364 YLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHV 423
+ F M+ YG+ PS HY CM D+ GRAG LE AL+ +++M ++P+ ++WGALL A V
Sbjct: 573 WCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRV 632
Query: 424 HGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYS 483
HGN D+ +I S HLFE+EP ++G ++LLSN YASAG+W+ V +R + K L+K PG+S
Sbjct: 633 HGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWS 692
Query: 484 WVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFL 543
+E N V F G+ HP E+ + L L +LK IGY+P+ V D+ D EK +
Sbjct: 693 SMEVDNKV-EVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHI 751
Query: 544 LMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHH 603
LM+HSE+LA+AF L+ T A +TI+I KNLR+C DCH V SK+T R+I+VRD+ RFHH
Sbjct: 752 LMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHH 811
Query: 604 FLNGACSCGDFW 615
F NG CSCGD+W
Sbjct: 812 FKNGVCSCGDYW 823
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 160/350 (45%), Gaps = 48/350 (13%)
Query: 12 VVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
V ++ CT L+ AK LHA + Q+ I L+ + +L + R F +
Sbjct: 57 VHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLV----NLYCYLGNVALARHTFDHI 112
Query: 72 PSPNPFLYSALIRAYTLRGPFTEALRLYT-SMRNQRITPISFTFSALFSAVTNLTLGTQL 130
+ + + ++ +I Y G +E +R ++ M + +TP TF ++ A + G ++
Sbjct: 113 QNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKI 172
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDM 190
H AL GF D++V ++I +Y + + +AR +FDEMP RD+ SW +I+ Y ++G+
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGN- 231
Query: 191 NSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISAC 250
KEAL LR D VT+ +SAC
Sbjct: 232 ------------------------------AKEALTLSNGLR----AMDSVTVVSLLSAC 257
Query: 251 AQLGASKDADWVRCI---AESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERN 307
+ G D+ R + + S G + V + L+D+Y++ G + + VF M R+
Sbjct: 258 TEAG-----DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRD 312
Query: 308 AFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAG 357
+++S+I + ++ + AI LF EM + I+P+ +T + + + G
Sbjct: 313 LISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 6/164 (3%)
Query: 275 RNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLF-YE 333
+NV + + LV++Y GNV A + F ++ R+ + ++ MI G+ G + I+ F
Sbjct: 84 QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF 143
Query: 334 MLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAG 393
ML + + P++ TF VL AC ++D + ++ +G + A + L R
Sbjct: 144 MLSSGLTPDYRTFPSVLKACR--TVIDGNKIHCLALK--FGFMWDVYVAASLIHLYSRYK 199
Query: 394 HLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHL 437
+ A L + MPV G+ W A++ GN A +S L
Sbjct: 200 AVGNARILFDEMPVRDMGS-WNAMISGYCQSGNAKEALTLSNGL 242
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/594 (36%), Positives = 338/594 (56%), Gaps = 38/594 (6%)
Query: 22 LRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSA 81
LR Q+H+ + + Y++T + L + + + S LF + P+ Y+A
Sbjct: 237 LRLGMQIHSLATKTGCYSHDYVLTGFIS-LYSKCGKIKMGS---ALFREFRKPDIVAYNA 292
Query: 82 LIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHAHALLLGFAS 141
+I YT G +L L+ + S T +L +L L +H + L F S
Sbjct: 293 MIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLS 352
Query: 142 DIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELD 201
V+ T L T Y++ ++ SAR+LFDE
Sbjct: 353 HASVS-------------------------------TALTTVYSKLNEIESARKLFDESP 381
Query: 202 VKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADW 261
K +W AM++GY QN + ++A+ FR ++++ + VT+ +SACAQLGA W
Sbjct: 382 EKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKW 441
Query: 262 VRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIH 321
V + S+ F ++ V +AL+ MY+KCG++ EA +F M ++N T+++MI G+ +H
Sbjct: 442 VHDLVRSTDF--ESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLH 499
Query: 322 GRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADH 381
G+ + A+ +FYEML + I P VTF+ VL AC+HAGLV +G +F++M YG PS H
Sbjct: 500 GQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKH 559
Query: 382 YACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELE 441
YACM D+LGRAGHL++ALQ +E M +EP +VW LLGA +H + ++A VS LFEL+
Sbjct: 560 YACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELD 619
Query: 442 PNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVK 501
P+N+G ++LLSN +++ + + VR+ + + L K PGY+ +E H F +GD
Sbjct: 620 PDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEI-GETPHVFTSGDQS 678
Query: 502 HPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFLLMAHSEKLALAFGLLNTD 561
HP++ EI + L+ L +++ GY P +D+ ++E+ ++ HSE+LA+AFGL+ T+
Sbjct: 679 HPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATE 738
Query: 562 AGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFLNGACSCGDFW 615
G+ I+I+KNLR+C DCH V SK+T R IVVRD RFHHF +G CSCGD+W
Sbjct: 739 PGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 200/473 (42%), Gaps = 62/473 (13%)
Query: 20 TTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLY 79
T++ Q HA I H +LL LT L Y R +F V P+ FL+
Sbjct: 31 TSISHLAQTHAQIILHGFRND----ISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLF 86
Query: 80 SALIRAYTLRGPFTEALRLYTSMRNQR-ITPISFTFSALFSAVTNLT---LGTQLHAHAL 135
+ L+R +++ +L ++ +R + P S T++ SA + G +H A+
Sbjct: 87 NVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAV 146
Query: 136 LLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARE 195
+ G S++ + + ++KMY K ++ ARKVFD MP++D + W
Sbjct: 147 VDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILW------------------ 188
Query: 196 LFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCL-REAGMETDEVTLAGAISACAQLG 254
M++GY +N M E+++ FR L E+ D TL + A A+L
Sbjct: 189 -------------NTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQ 235
Query: 255 ASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSM 314
+ + +A +G VL G + +YSKCG ++ +FR ++ + Y++M
Sbjct: 236 ELRLGMQIHSLATKTGCYSHDYVLTG--FISLYSKCGKIKMGSALFREFRKPDIVAYNAM 293
Query: 315 IVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLV--DQGQYLFSNMEGC 372
I G+ +G ++ LF E++ + + T V ++ H L+ G L SN
Sbjct: 294 IHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNF--- 350
Query: 373 YGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEI 432
+ A + + + +E A +L + P E + W A++ +G + A
Sbjct: 351 ---LSHASVSTALTTVYSKLNEIESARKLFDESP-EKSLPSWNAMISGYTQNGLTEDAIS 406
Query: 433 VSRHL--FELEPNNIGNYLLLSNTYA----SAGRWDDVSRVRKLMRDKNLKKN 479
+ R + E PN + +LS S G+W V L+R + + +
Sbjct: 407 LFREMQKSEFSPNPVTITCILSACAQLGALSLGKW-----VHDLVRSTDFESS 454
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 156/376 (41%), Gaps = 62/376 (16%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPI-SFTFSALFSAVTN 123
R +F ++P + L++ +I Y + E+++++ + N+ T + + T + AV
Sbjct: 174 RKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAE 233
Query: 124 LT---LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTEL 180
L LG Q+H+ A K+GC D V T
Sbjct: 234 LQELRLGMQIHSLA-------------------TKTGCY-----------SHDYV-LTGF 262
Query: 181 ITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
I+ Y++ G + LF E D VA+ AM+ GY N + +L F+ L +G
Sbjct: 263 ISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRS 322
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVL----VGSALVDMYSKCGNVEEA 296
TL + L I G+ N L V +AL +YSK +E A
Sbjct: 323 STLVSLVPVSGHL---------MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESA 373
Query: 297 YNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHA 356
+F E++ ++++MI G+ +G AI LF EM ++E PN VT +L AC
Sbjct: 374 RKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQL 433
Query: 357 GLVDQGQYLFSNMEGCYGVVPSADHYA------CMADLLGRAGHLEKALQLVETMPVEPN 410
G + G+++ + +V S D + + + + G + +A +L + M + N
Sbjct: 434 GALSLGKWV-------HDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM-TKKN 485
Query: 411 GAVWGALLGASHVHGN 426
W ++ +HG
Sbjct: 486 EVTWNTMISGYGLHGQ 501
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 416 bits (1069), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/607 (35%), Positives = 348/607 (57%), Gaps = 40/607 (6%)
Query: 13 VSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVP 72
+ +++ C +LR Q+ A+ + ++ S++ L + T P SY R LF +
Sbjct: 33 ILLISKCNSLRELMQIQAYAIKSHIEDVSFVAK--LINFCTESPTESSMSYARHLFEAMS 90
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT---NLTLGTQ 129
P+ +++++ R Y+ E L+ + I P ++TF +L A L G Q
Sbjct: 91 EPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQ 150
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGD 189
LH ++ LG +++V T+I MY + D
Sbjct: 151 LHCLSMKLGLDDNVYVCPTLINMYTECE-------------------------------D 179
Query: 190 MNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISA 249
++SAR +FD + V + AM+TGYA+ P EAL FR ++ ++ +E+TL +S+
Sbjct: 180 VDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSS 239
Query: 250 CAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAF 309
CA LG+ W+ A+ F + V V +AL+DM++KCG++++A ++F M+ ++
Sbjct: 240 CALLGSLDLGKWIHKYAKKHSF--CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQ 297
Query: 310 TYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNM 369
+S+MIV +A HG+A ++ +F M ++P+ +TF+G+L AC+H G V++G+ FS M
Sbjct: 298 AWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQM 357
Query: 370 EGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDV 429
+G+VPS HY M DLL RAG+LE A + ++ +P+ P +W LL A H N D+
Sbjct: 358 VSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDL 417
Query: 430 AEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRN 489
AE VS +FEL+ ++ G+Y++LSN YA +W+ V +RK+M+D+ K PG S +E N
Sbjct: 418 AEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEV-N 476
Query: 490 GVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPY-DIGDKEKRFLLMAHS 548
V+HEF +GD ++ +ALD++++ LK GY+P+ S V + ++ D+EK L HS
Sbjct: 477 NVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHS 536
Query: 549 EKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFLNGA 608
EKLA+ FGLLNT G+TI+++KNLR+C DCH S + GRK+V+RD RFHHF +G
Sbjct: 537 EKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGK 596
Query: 609 CSCGDFW 615
CSCGDFW
Sbjct: 597 CSCGDFW 603
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/555 (39%), Positives = 326/555 (58%), Gaps = 19/555 (3%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT- 125
LF ++P P+ F Y+ ++ Y F +A + M F S T +T
Sbjct: 115 LFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRM----------PFKDAASWNTMITG 164
Query: 126 ---LGTQLHAHALLLGFASDIFVN-NTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
G A L V+ N MI Y++ G L+ A F P R VV+WT +I
Sbjct: 165 YARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMI 224
Query: 182 TAYARNGDMNSARELFDELDV-KDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
T Y + + A +F ++ V K+ V W AM++GY +N+ P++ L+ FR + E G+ +
Sbjct: 225 TGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNS 284
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
L+ A+ C++L A + + I S +V ++L+ MY KCG + +A+ +F
Sbjct: 285 SGLSSALLGCSELSALQLGRQIHQIVSKSTL--CNDVTALTSLISMYCKCGELGDAWKLF 342
Query: 301 RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVD 360
MK+++ +++MI G+A HG A A+ LF EM++ +I+P+ +TFV VL+AC HAGLV+
Sbjct: 343 EVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVN 402
Query: 361 QGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGA 420
G F +M Y V P DHY CM DLLGRAG LE+AL+L+ +MP P+ AV+G LLGA
Sbjct: 403 IGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGA 462
Query: 421 SHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNP 480
VH N ++AE + L +L N Y+ L+N YAS RW+DV+RVRK M++ N+ K P
Sbjct: 463 CRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVP 522
Query: 481 GYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEK 540
GYSW+E RN V H F + D HPE++ I K L +L +++K GY P L +++ +++K
Sbjct: 523 GYSWIEIRNKV-HHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQK 581
Query: 541 RFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMR 600
LL+ HSEKLA+AFG + GS I++ KNLRIC DCH + S++ R+I+VRD R
Sbjct: 582 EKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTR 641
Query: 601 FHHFLNGACSCGDFW 615
FHHF +G+CSCGD+W
Sbjct: 642 FHHFKDGSCSCGDYW 656
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 137/298 (45%), Gaps = 19/298 (6%)
Query: 146 NNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDK 205
N+ +I + + A ++FDE+P+ D S+ +++ Y RN + A+ FD + KD
Sbjct: 96 NSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDA 155
Query: 206 VAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCI 265
+W M+TGYA+ ++A E F + ME +EV+ IS + G + A +
Sbjct: 156 ASWNTMITGYARRGEMEKARELFYSM----MEKNEVSWNAMISGYIECGDLEKASHFFKV 211
Query: 266 AESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK-ERNAFTYSSMIVGFAIHGRA 324
A P R V+ +A++ Y K VE A +F+ M +N T+++MI G+ + R
Sbjct: 212 A------PVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRP 265
Query: 325 RAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQ---YLFSNMEGCYGVVPSADH 381
+KLF MLE I+PN L+ C+ + G+ + S C V
Sbjct: 266 EDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTA---- 321
Query: 382 YACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFE 439
+ + + G L A +L E M + + W A++ HGN D A + R + +
Sbjct: 322 LTSLISMYCKCGELGDAWKLFEVMK-KKDVVAWNAMISGYAQHGNADKALCLFREMID 378
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 414 bits (1064), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/633 (36%), Positives = 357/633 (56%), Gaps = 34/633 (5%)
Query: 6 RALEWQVVSIL-NTC---TTLRRAKQLHAHIYRHNLHQS--SYIITNLLRHLTTTFPHLP 59
+ L +Q V +L C + LR K+LHA + L ++ SY+ L + ++ +
Sbjct: 2 KCLSYQKVRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVT 61
Query: 60 IHSYPRLLFSQVP--SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSAL 117
LF ++P + ++ L+ +++ G +++L+ MR +R+ + L
Sbjct: 62 AQK----LFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCL 117
Query: 118 F---SAVTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDV 174
F + + +L Q H A+ +G + + V N ++ MY K G + +++F+E+ ++ V
Sbjct: 118 FGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSV 177
Query: 175 VSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEF-----FR 229
VSWT ++ + + RE+F E+ ++ VAWT MV GY +E LE FR
Sbjct: 178 VSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFR 237
Query: 230 CLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGF-----GPARNVLVGSALV 284
C G + VTL +SACAQ G WV A +V+VG+ALV
Sbjct: 238 C----GHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALV 293
Query: 285 DMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHV 344
DMY+KCGN++ + NVFR M++RN T++++ G A+HG+ R I +F +M+ E+KP+ +
Sbjct: 294 DMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR-EVKPDDL 352
Query: 345 TFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVET 404
TF VL AC+H+G+VD+G F ++ YG+ P DHYACM DLLGRAG +E+A L+
Sbjct: 353 TFTAVLSACSHSGIVDEGWRCFHSLR-FYGLEPKVDHYACMVDLLGRAGLIEEAEILMRE 411
Query: 405 MPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDV 464
MPV PN V G+LLG+ VHG ++AE + R L ++ P N +L+SN Y + GR D
Sbjct: 412 MPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIA 471
Query: 465 SRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGY 524
+R +R + ++K PG S + N +H F +GD HP EI L++++ER+++ GY
Sbjct: 472 DGLRGSLRKRGIRKIPGLSSIYV-NDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGY 530
Query: 525 LPNLSS-VPYDIGD-KEKRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVM 582
+P++S V + GD +EK L HSEKLA+ FGLL T + + + KNLRIC DCH M
Sbjct: 531 VPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAM 590
Query: 583 CGASKVTGRKIVVRDNMRFHHFLNGACSCGDFW 615
SKV R+I++RD RFH F G+CSC D+W
Sbjct: 591 KIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/614 (36%), Positives = 353/614 (57%), Gaps = 51/614 (8%)
Query: 16 LNTCTTLR---RAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVP 72
+ C++L KQ H + +QS +++ L + +T L R +F ++P
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFG-YQSDIFVSSALIVMYSTCGKLE---DARKVFDEIP 138
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSM---RNQRITPISFTFSALFSAVTNLT---- 125
N ++++IR Y L G +A+ L+ + N + L S ++ +
Sbjct: 139 KRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPA 198
Query: 126 --LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
L +H+ + GF + V NT++ Y K G
Sbjct: 199 KGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGG-------------------------- 232
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET-DEVT 242
G + AR++FD++ KD+V++ ++++ YAQ+ M EA E FR L + + T + +T
Sbjct: 233 ---EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAIT 289
Query: 243 LAGAISACAQLGASKDADWVRCIAESS-GFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
L+ + A + GA + +CI + G +V+VG++++DMY KCG VE A F
Sbjct: 290 LSTVLLAVSHSGALRIG---KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFD 346
Query: 302 GMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
MK +N ++++MI G+ +HG A A++LF M+++ ++PN++TFV VL AC+HAGL +
Sbjct: 347 RMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVE 406
Query: 362 GQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGAS 421
G F+ M+G +GV P +HY CM DLLGRAG L+KA L++ M ++P+ +W +LL A
Sbjct: 407 GWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAAC 466
Query: 422 HVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPG 481
+H N ++AEI LFEL+ +N G Y+LLS+ YA AGRW DV RVR +M+++ L K PG
Sbjct: 467 RIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPG 526
Query: 482 YSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKR 541
+S +E NG +H FL GD +HP+ +I + L +L +L GY+ N SSV +D+ ++EK
Sbjct: 527 FSLLE-LNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKE 585
Query: 542 FLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRF 601
L HSEKLA+AFG++NT GST+ ++KNLR+C DCH V+ SK+ R+ VVRD RF
Sbjct: 586 MTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRF 645
Query: 602 HHFLNGACSCGDFW 615
HHF +G CSCGD+W
Sbjct: 646 HHFKDGGCSCGDYW 659
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 175/382 (45%), Gaps = 35/382 (9%)
Query: 51 LTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPI 110
L T H + L V + F ++++I G EAL ++SMR + P
Sbjct: 16 LLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPT 75
Query: 111 SFTFSALFSAVTNLT---LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFD 167
+F A ++L G Q H A + G+ SDIFV++ +I MY G L+ ARKVFD
Sbjct: 76 RSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFD 135
Query: 168 EMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEF 227
E+P+R++VSWT +I Y NG+ A LF +L V + AM
Sbjct: 136 EIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMF--------------- 180
Query: 228 FRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMY 287
D + L ISAC+++ A + + GF R V VG+ L+D Y
Sbjct: 181 ----------LDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD--RGVSVGNTLLDAY 228
Query: 288 SKCGN--VEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKP-NHV 344
+K G V A +F + +++ +Y+S++ +A G + A ++F +++ ++ N +
Sbjct: 229 AKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI 288
Query: 345 TFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVET 404
T VL+A +H+G + G+ + + G+ + D+ + G +E A + +
Sbjct: 289 TLSTVLLAVSHSGALRIGKCIHDQVIR-MGLEDDVIVGTSIIDMYCKCGRVETARKAFDR 347
Query: 405 MPVEPNGAVWGALLGASHVHGN 426
M N W A++ +HG+
Sbjct: 348 MK-NKNVRSWTAMIAGYGMHGH 368
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 410 bits (1055), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/611 (37%), Positives = 348/611 (56%), Gaps = 50/611 (8%)
Query: 14 SILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPS 73
+I+ +++ +Q+HAH+ +S ++T L+ T I +Y LLF VP
Sbjct: 14 AIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLI---TLACSARAI-AYTHLLFLSVPL 69
Query: 74 PNPFLYSALIRAYT-LRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT---LGTQ 129
P+ FL++++I++ + LR P + Y M + ++P ++TF+++ + +L+ +G
Sbjct: 70 PDDFLFNSVIKSTSKLRLPL-HCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKG 128
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGD 189
+H HA++ GF D +V L+T Y++ GD
Sbjct: 129 VHCHAVVSGFGLDTYVQ-------------------------------AALVTFYSKCGD 157
Query: 190 MNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISA 249
M AR++FD + K VAW ++V+G+ QN + EA++ F +RE+G E D T +SA
Sbjct: 158 MEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSA 217
Query: 250 CAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAF 309
CAQ GA WV S G NV +G+AL+++YS+CG+V +A VF MKE N
Sbjct: 218 CAQTGAVSLGSWVHQYIISEGLD--LNVKLGTALINLYSRCGDVGKAREVFDKMKETNVA 275
Query: 310 TYSSMIVGFAIHGRARAAIKLFYEMLETEIK--PNHVTFVGVLVACTHAGLVDQGQYLFS 367
+++MI + HG + A++LF +M E + PN+VTFV VL AC HAGLV++G+ ++
Sbjct: 276 AWTAMISAYGTHGYGQQAVELFNKM-EDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYK 334
Query: 368 NMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNG---AVWGALLGASHVH 424
M Y ++P +H+ CM D+LGRAG L++A + + + A+W A+LGA +H
Sbjct: 335 RMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMH 394
Query: 425 GNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSW 484
N D+ +++ L LEP+N G++++LSN YA +G+ D+VS +R M NL+K GYS
Sbjct: 395 RNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSV 454
Query: 485 VESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFLL 544
+E N + F GD H E EI + L+ L+ R K IGY P V + + ++EK F L
Sbjct: 455 IEVENKT-YMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEEEEKEFAL 513
Query: 545 MAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHF 604
HSEKLA+AFGLL T I I+KNLRICEDCH S V+ R+I VRD +RFHHF
Sbjct: 514 RYHSEKLAVAFGLLKT-VDVAITIVKNLRICEDCHSAFKYISIVSNRQITVRDKLRFHHF 572
Query: 605 LNGACSCGDFW 615
NG+CSC D+W
Sbjct: 573 QNGSCSCLDYW 583
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 410 bits (1055), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/610 (36%), Positives = 331/610 (54%), Gaps = 52/610 (8%)
Query: 14 SILNTCTTLRRAKQLHAHIYRH---NLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
S L C RA I RH N H+ + N+L ++ F L + LF Q
Sbjct: 65 SELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLL---NDAHQLFDQ 121
Query: 71 VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQL 130
+P N ++ +I AY+ +AL L M + P +T+S++ + ++ L
Sbjct: 122 MPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRML 181
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDM 190
H + G SD+FV + LI +A+ G+
Sbjct: 182 HCGIIKEGLESDVFVRSA-------------------------------LIDVFAKLGEP 210
Query: 191 NSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISAC 250
A +FDE+ D + W +++ G+AQN+ ALE F+ ++ AG ++ TL + AC
Sbjct: 211 EDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRAC 270
Query: 251 A-----QLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE 305
+LG V+ +++++ +ALVDMY KCG++E+A VF MKE
Sbjct: 271 TGLALLELGMQAHVHIVK---------YDQDLILNNALVDMYCKCGSLEDALRVFNQMKE 321
Query: 306 RNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYL 365
R+ T+S+MI G A +G ++ A+KLF M + KPN++T VGVL AC+HAGL++ G Y
Sbjct: 322 RDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYY 381
Query: 366 FSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHG 425
F +M+ YG+ P +HY CM DLLG+AG L+ A++L+ M EP+ W LLGA V
Sbjct: 382 FRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQR 441
Query: 426 NPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWV 485
N +AE ++ + L+P + G Y LLSN YA++ +WD V +R MRD+ +KK PG SW+
Sbjct: 442 NMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWI 501
Query: 486 ESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFLLM 545
E N IH F+ GD HP+I E+ K L+ L+ RL IGY+P + V D+ ++ L
Sbjct: 502 EV-NKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLR 560
Query: 546 AHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFL 605
HSEKLALAFGL+ I+I KNLRIC DCH+ ASK+ R IV+RD +R+HHF
Sbjct: 561 HHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQ 620
Query: 606 NGACSCGDFW 615
+G CSCGD+W
Sbjct: 621 DGKCSCGDYW 630
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/551 (37%), Positives = 323/551 (58%), Gaps = 24/551 (4%)
Query: 79 YSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN---LTLGTQLHAHAL 135
++ ++ + G EA+ ++ + + P T S++ +V + L +G +H + +
Sbjct: 220 WNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVI 279
Query: 136 LLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARE 195
G D V + MI MY KSG + +F++ + IT +RNG ++ A E
Sbjct: 280 KQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALE 339
Query: 196 LFD-------ELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAIS 248
+F+ EL+V V+WT+++ G AQN EALE FR ++ AG++ + VT+ +
Sbjct: 340 MFELFKEQTMELNV---VSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLP 396
Query: 249 ACAQLGASKDADWVRCIAESSGFGP----ARNVLVGSALVDMYSKCGNVEEAYNVFRGMK 304
AC + A + GF NV VGSAL+DMY+KCG + + VF M
Sbjct: 397 ACGNIAALGHG------RSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP 450
Query: 305 ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQY 364
+N ++S++ GF++HG+A+ + +F ++ T +KP+ ++F +L AC GL D+G
Sbjct: 451 TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK 510
Query: 365 LFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVH 424
F M YG+ P +HY+CM +LLGRAG L++A L++ MP EP+ VWGALL + +
Sbjct: 511 YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQ 570
Query: 425 GNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSW 484
N D+AEI + LF LEP N G Y+LLSN YA+ G W +V +R M LKKNPG SW
Sbjct: 571 NNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSW 630
Query: 485 VESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFLL 544
++ +N V + LAGD HP+I++I + +D++ + ++ G+ PNL +D+ ++E+ +L
Sbjct: 631 IQVKNRV-YTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQML 689
Query: 545 MAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHF 604
HSEKLA+ FGLLNT G+ ++++KNLRIC DCH V+ S GR+I +RD RFHHF
Sbjct: 690 WGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHF 749
Query: 605 LNGACSCGDFW 615
+G CSCGDFW
Sbjct: 750 KDGICSCGDFW 760
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 130/512 (25%), Positives = 231/512 (45%), Gaps = 87/512 (16%)
Query: 24 RAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALI 83
+ Q HA I + YI L+ ++ + + L+ +P P + +S+LI
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLI----ASYSNYNCFNDADLVLQSIPDPTIYSFSSLI 88
Query: 84 RAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT---LGTQLHAHALLLGFA 140
A T FT+++ +++ M + + P S LF L+ +G Q+H + + G
Sbjct: 89 YALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLD 148
Query: 141 SDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDEL 200
D FV +M MY++ G + ARKVFD M +DVV+ + L+ AYAR G + + E+
Sbjct: 149 MDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEM 208
Query: 201 DVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGAS 256
+ + V+W +++G+ ++ KEA+ F+ + G D+VT++ + + +G S
Sbjct: 209 ESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPS---VGDS 265
Query: 257 KDADWVRCIAESSGF----GPARNVLVGSALVDMYSKCGN-------------------- 292
+ + R I G+ G ++ V SA++DMY K G+
Sbjct: 266 EMLNMGRLI---HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCN 322
Query: 293 -----------VEEAYNVFRGMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLET 337
V++A +F KE+ N +++S+I G A +G+ A++LF EM
Sbjct: 323 AYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVA 382
Query: 338 EIKPNHVTFVGVLVACTHAGLVDQGQ---------YLFSNMEGCYGVVPSADHYACMADL 388
+KPNHVT +L AC + + G+ +L N+ V SA + D+
Sbjct: 383 GVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVH-----VGSA-----LIDM 432
Query: 389 LGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFE------LEP 442
+ G + + + MP + N W +L+ +HG E++S +FE L+P
Sbjct: 433 YAKCGRINLSQIVFNMMPTK-NLVCWNSLMNGFSMHGK--AKEVMS--IFESLMRTRLKP 487
Query: 443 NNIGNYLLLSNTYASAGRWDDVSRVRKLMRDK 474
+ I LLS G D+ + K+M ++
Sbjct: 488 DFISFTSLLS-ACGQVGLTDEGWKYFKMMSEE 518
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 409 bits (1052), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/609 (35%), Positives = 343/609 (56%), Gaps = 52/609 (8%)
Query: 15 ILNTCTTLR---RAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
IL +C +L +QLH H+ + +++T L+ + + + + R +F +
Sbjct: 59 ILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALI----SMYCKCGLVADARKVFEEN 114
Query: 72 PSPNPF--LYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT---NLTL 126
P + Y+ALI YT T+A ++ M+ ++ S T L T L L
Sbjct: 115 PQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWL 174
Query: 127 GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYAR 186
G LH + G S++ V N+ I MY+K G
Sbjct: 175 GRSLHGQCVKGGLDSEVAVLNSFITMYMKCG----------------------------- 205
Query: 187 NGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGA 246
+ + R LFDE+ VK + W A+++GY+QN + + LE + ++ +G+ D TL
Sbjct: 206 --SVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSV 263
Query: 247 ISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER 306
+S+CA LGA K V + ES+GF P NV V +A + MY++CGN+ +A VF M +
Sbjct: 264 LSSCAHLGAKKIGHEVGKLVESNGFVP--NVFVSNASISMYARCGNLAKARAVFDIMPVK 321
Query: 307 NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLF 366
+ ++++MI + +HG + LF +M++ I+P+ FV VL AC+H+GL D+G LF
Sbjct: 322 SLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELF 381
Query: 367 SNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGN 426
M+ Y + P +HY+C+ DLLGRAG L++A++ +E+MPVEP+GAVWGALLGA +H N
Sbjct: 382 RAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKN 441
Query: 427 PDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVE 486
D+AE+ + E EPNNIG Y+L+SN Y+ + + + R+R +MR++ +K PGYS+VE
Sbjct: 442 VDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVE 501
Query: 487 SRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFLLMA 546
+ G +H FLAGD H + E+ + LD+L + + ++ D G+ E
Sbjct: 502 HK-GRVHLFLAGDRSHEQTEEVHRMLDELETSVMELA-----GNMDCDRGE-EVSSTTRE 554
Query: 547 HSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFLN 606
HSE+LA+AFG+LN+ G+ I ++KNLR+CEDCH+ + SK+ R+ VVRD RFH+F +
Sbjct: 555 HSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKD 614
Query: 607 GACSCGDFW 615
G CSC D+W
Sbjct: 615 GVCSCKDYW 623
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 183/408 (44%), Gaps = 48/408 (11%)
Query: 83 IRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL---GTQLHAHALLLGF 139
+R + F+E++ LY SM +P +F+F + + +L+L G QLH H G
Sbjct: 25 LRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGC 84
Query: 140 ASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDE 199
++ FV +I MY K G + ARKVF+E PQ +S
Sbjct: 85 ETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLS----------------------- 121
Query: 200 LDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACA-----QLG 254
V + A+++GY N+ +A FR ++E G+ D VT+ G + C LG
Sbjct: 122 ------VCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLG 175
Query: 255 ASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSM 314
S V+ G V V ++ + MY KCG+VE +F M + T++++
Sbjct: 176 RSLHGQCVK-------GGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAV 228
Query: 315 IVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYG 374
I G++ +G A ++L+ +M + + P+ T V VL +C H G G + +E G
Sbjct: 229 ISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVES-NG 287
Query: 375 VVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVS 434
VP+ + R G+L KA + + MPV+ + W A++G +HG ++ ++
Sbjct: 288 FVPNVFVSNASISMYARCGNLAKARAVFDIMPVK-SLVSWTAMIGCYGMHGMGEIGLMLF 346
Query: 435 RHLFE--LEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNP 480
+ + + P+ ++LS S + R + R+ L+ P
Sbjct: 347 DDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGP 394
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 408 bits (1048), Expect = e-114, Method: Compositional matrix adjust.
Identities = 235/623 (37%), Positives = 353/623 (56%), Gaps = 47/623 (7%)
Query: 1 MVGERRALEWQVVSIL--NTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHL 58
M+ ++ L Q++S L + + ++ K++HA + R + + ++T LL +L +
Sbjct: 1 MLAKQTPLTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVV----I 56
Query: 59 PIHSYPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALF 118
Y R +F ++ P FL++ L + Y E+L LY MR+ + P FT+ +
Sbjct: 57 GDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVV 116
Query: 119 SAVTNL---TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVV 175
A++ L + G LHAH + GF GCL +
Sbjct: 117 KAISQLGDFSCGFALHAHVVKYGF-----------------GCLG--------------I 145
Query: 176 SWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAG 235
TEL+ Y + G+++SA LF+ + VKD VAW A + Q ALE+F +
Sbjct: 146 VATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADA 205
Query: 236 METDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEE 295
++ D T+ +SAC QLG+ + + + A N++V +A +DM+ KCGN E
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDC--NIIVENARLDMHLKCGNTEA 263
Query: 296 AYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTH 355
A +F MK+RN ++S+MIVG+A++G +R A+ LF M ++PN+VTF+GVL AC+H
Sbjct: 264 ARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSH 323
Query: 356 AGLVDQGQYLFSNM--EGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAV 413
AGLV++G+ FS M + P +HYACM DLLGR+G LE+A + ++ MPVEP+ +
Sbjct: 324 AGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGI 383
Query: 414 WGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNY-LLLSNTYASAGRWDDVSRVRKLMR 472
WGALLGA VH + + + V+ L E P+ IG+Y +LLSN YA+AG+WD V +VR MR
Sbjct: 384 WGALLGACAVHRDMILGQKVADVLVETAPD-IGSYHVLLSNIYAAAGKWDCVDKVRSKMR 442
Query: 473 DKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVP 532
KK YS VE G IH F GD HP+ I + LD++L++++ +GY+P+ SV
Sbjct: 443 KLGTKKVAAYSSVEF-EGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVF 501
Query: 533 YDIGDKEKRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRK 592
+D+ +EK L HSEKLA+AFGL+ G I++MKNLR C+DCH S +T +
Sbjct: 502 HDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTE 561
Query: 593 IVVRDNMRFHHFLNGACSCGDFW 615
I++RD RFHHF NG CSC +FW
Sbjct: 562 IIMRDKNRFHHFRNGVCSCKEFW 584
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/553 (37%), Positives = 310/553 (56%), Gaps = 39/553 (7%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL 126
LF ++P + ++AL YT G EA+ L+ M + P S+ + SA
Sbjct: 168 LFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSAC----- 222
Query: 127 GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSAR---KVFDEMP-QRDVVSWTELIT 182
V G LDS K +EM Q++ T L+
Sbjct: 223 ---------------------------VHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVN 255
Query: 183 AYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
YA+ G M AR +FD + KD V W+ M+ GYA N+ PKE +E F + + ++ D+ +
Sbjct: 256 LYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFS 315
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
+ G +S+CA LGA +W + + F N+ + +AL+DMY+KCG + + VF+
Sbjct: 316 IVGFLSSCASLGALDLGEWGISLIDRHEF--LTNLFMANALIDMYAKCGAMARGFEVFKE 373
Query: 303 MKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQG 362
MKE++ ++ I G A +G + + +F + + I P+ TF+G+L C HAGL+ G
Sbjct: 374 MKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDG 433
Query: 363 QYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASH 422
F+ + Y + + +HY CM DL GRAG L+ A +L+ MP+ PN VWGALL
Sbjct: 434 LRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCR 493
Query: 423 VHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGY 482
+ + +AE V + L LEP N GNY+ LSN Y+ GRWD+ + VR +M K +KK PGY
Sbjct: 494 LVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGY 553
Query: 483 SWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRF 542
SW+E G +HEFLA D HP ++I L+DL ++ +G++P V +D+ ++EK
Sbjct: 554 SWIE-LEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKER 612
Query: 543 LLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFH 602
+L HSEKLA+A GL++TD G I+++KNLR+C DCH VM SK+T R+IVVRDN RFH
Sbjct: 613 VLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFH 672
Query: 603 HFLNGACSCGDFW 615
F NG+CSC D+W
Sbjct: 673 CFTNGSCSCNDYW 685
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 180/357 (50%), Gaps = 40/357 (11%)
Query: 11 QVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
Q+ ++++ T+ KQ+H + H+LH ++++ LL+ T F +SY LLFS
Sbjct: 15 QIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKR--TLFFRQTKYSY--LLFSH 70
Query: 71 VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT---LG 127
PN FLY++LI + F E L L+ S+R + FTF + A T + LG
Sbjct: 71 TQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLG 130
Query: 128 TQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARN 187
LH+ + GF DV + T L++ Y+ +
Sbjct: 131 IDLHSLVVKCGF-------------------------------NHDVAAMTSLLSIYSGS 159
Query: 188 GDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAI 247
G +N A +LFDE+ + V WTA+ +GY + +EA++ F+ + E G++ D + +
Sbjct: 160 GRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVL 219
Query: 248 SACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERN 307
SAC +G +W+ E +N V + LV++Y+KCG +E+A +VF M E++
Sbjct: 220 SACVHVGDLDSGEWIVKYMEEMEM--QKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKD 277
Query: 308 AFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQY 364
T+S+MI G+A + + I+LF +ML+ +KP+ + VG L +C G +D G++
Sbjct: 278 IVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEW 334
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 110/223 (49%), Gaps = 4/223 (1%)
Query: 196 LFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGA 255
LF + + +++ G+ N + E L+ F +R+ G+ T + AC + +
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 256 SKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMI 315
K + + GF +V ++L+ +YS G + +A+ +F + +R+ T++++
Sbjct: 127 RKLGIDLHSLVVKCGFN--HDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALF 184
Query: 316 VGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGV 375
G+ GR R AI LF +M+E +KP+ V VL AC H G +D G+++ ME +
Sbjct: 185 SGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEE-MEM 243
Query: 376 VPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALL 418
++ + +L + G +EKA + ++M VE + W ++
Sbjct: 244 QKNSFVRTTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMI 285
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/602 (36%), Positives = 350/602 (58%), Gaps = 14/602 (2%)
Query: 21 TLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYS 80
TL AK LHAHI + + Q + L+ + S+ +F ++P + ++
Sbjct: 18 TLTTAKALHAHIVKLGIVQCCPLANTLV----NVYGKCGAASHALQVFDEMPHRDHIAWA 73
Query: 81 ALIRAYTLRGPFTEALRLYTSMRNQR-ITPISFTFSALFSAVTNL---TLGTQLHAHALL 136
+++ A + L +++S+ + + P F FSAL A NL G Q+H H ++
Sbjct: 74 SVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIV 133
Query: 137 LGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSAREL 196
+A+D V ++++ MY K G L+SA+ VFD + ++ +SWT +++ YA++G A EL
Sbjct: 134 SEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALEL 193
Query: 197 FDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET-DEVTLAGAISACAQLGA 255
F L VK+ +WTA+++G+ Q+ EA F +R ++ D + L+ + ACA L A
Sbjct: 194 FRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAA 253
Query: 256 SKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMI 315
S V + + GF V + +AL+DMY+KC +V A ++F M+ R+ +++S+I
Sbjct: 254 SIAGRQVHGLVIALGFDSC--VFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLI 311
Query: 316 VGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGV 375
VG A HG+A A+ L+ +M+ +KPN VTFVG++ AC+H G V++G+ LF +M YG+
Sbjct: 312 VGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGI 371
Query: 376 VPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSR 435
PS HY C+ DLLGR+G L++A L+ TMP P+ W ALL A G + ++
Sbjct: 372 RPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIAD 431
Query: 436 HLF-ELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHE 494
HL + + Y+LLSN YASA W VS R+ + + ++K+PG+S VE R
Sbjct: 432 HLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKET-EV 490
Query: 495 FLAGDVKHPEINEIKKALDDLLERLKAI-GYLPNLSSVPYDIGDKEKRFLLMAHSEKLAL 553
F AG+ HP +I + L L E ++ GY+P+ S + +D+ ++EK LL HSE+ A+
Sbjct: 491 FYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAV 550
Query: 554 AFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFLNGACSCGD 613
A+GLL G+ I+I+KNLR+C DCH+V+ S++T R+I+VRD R+HHF G CSC D
Sbjct: 551 AYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCND 610
Query: 614 FW 615
FW
Sbjct: 611 FW 612
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/618 (36%), Positives = 338/618 (54%), Gaps = 51/618 (8%)
Query: 11 QVVSILNTC----TTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRL 66
Q +L C ++L A ++H HI + Q ++ T L+ + L Y R
Sbjct: 78 QTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLI----GMYSDLGSVDYARK 133
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA------ 120
+F + ++++AL RA TL G E L LY M + FT++ + A
Sbjct: 134 VFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASEC 193
Query: 121 -VTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTE 179
V +L G ++HAH G++S +++ T++ MY
Sbjct: 194 TVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMY-------------------------- 227
Query: 180 LITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFR-CLREAGMET 238
AR G ++ A +F + V++ V+W+AM+ YA+N EAL FR +RE +
Sbjct: 228 -----ARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 282
Query: 239 -DEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAY 297
+ VT+ + ACA L A + + G V+ SALV MY +CG +E
Sbjct: 283 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI--SALVTMYGRCGKLEVGQ 340
Query: 298 NVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAG 357
VF M +R+ +++S+I + +HG + AI++F EML P VTFV VL AC+H G
Sbjct: 341 RVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEG 400
Query: 358 LVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGAL 417
LV++G+ LF M +G+ P +HYACM DLLGRA L++A ++V+ M EP VWG+L
Sbjct: 401 LVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSL 460
Query: 418 LGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLK 477
LG+ +HGN ++AE SR LF LEP N GNY+LL++ YA A WD+V RV+KL+ + L+
Sbjct: 461 LGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQ 520
Query: 478 KNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGD 537
K PG W+E R ++ F++ D +P + +I L L E +K GY+P V Y++
Sbjct: 521 KLPGRCWMEVRRK-MYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELET 579
Query: 538 KEKRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRD 597
+EK +++ HSEKLALAFGL+NT G I+I KNLR+CEDCH+ SK ++I+VRD
Sbjct: 580 EEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRD 639
Query: 598 NMRFHHFLNGACSCGDFW 615
RFH F NG CSCGD+W
Sbjct: 640 VNRFHRFKNGVCSCGDYW 657
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 157/353 (44%), Gaps = 48/353 (13%)
Query: 82 LIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV---TNLTLGTQLHAHALLLG 138
LI++ G +A+R+ + Q +P T+ L ++L+ ++H H L G
Sbjct: 52 LIQSLCKEGKLKQAIRVLS----QESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNG 107
Query: 139 FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFD 198
D F+ +I MY G +D ARKVFD+ +R + W L A
Sbjct: 108 SDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALT------------- 154
Query: 199 ELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISAC--AQLGAS 256
+ G+ + E L + + G+E+D T + AC ++ +
Sbjct: 155 -------------LAGHGE-----EVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVN 196
Query: 257 KDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIV 316
A + G + +V + + LVDMY++ G V+ A VF GM RN ++S+MI
Sbjct: 197 HLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIA 256
Query: 317 GFAIHGRARAAIKLFYEMLE--TEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNM--EGC 372
+A +G+A A++ F EM+ + PN VT V VL AC ++QG+ + + G
Sbjct: 257 CYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGL 316
Query: 373 YGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHG 425
++P + + + GR G LE ++ + M + + W +L+ + VHG
Sbjct: 317 DSILPVI---SALVTMYGRCGKLEVGQRVFDRMH-DRDVVSWNSLISSYGVHG 365
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/607 (36%), Positives = 336/607 (55%), Gaps = 38/607 (6%)
Query: 12 VVSILNTCT---TLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLF 68
V IL C + AK H I R +L LL L + R +F
Sbjct: 64 VHEILQLCARNGAVMEAKACHGKIIRIDLEGD----VTLLNVLINAYSKCGFVELARQVF 119
Query: 69 SQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGT 128
+ + ++ +I YT +EAL ++ MRN+ FT S++ SA
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC------- 172
Query: 129 QLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNG 188
G D + + VK+ C+D ++ T L+ YA+ G
Sbjct: 173 ---------GVNCDALECKKLHCLSVKT-CID-----------LNLYVGTALLDLYAKCG 211
Query: 189 DMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAIS 248
+ A ++F+ + K V W++MV GY QN +EAL +R + +E ++ TL+ I
Sbjct: 212 MIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVIC 271
Query: 249 ACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNA 308
AC+ L A + + + SGFG NV V S+ VDMY+KCG++ E+Y +F ++E+N
Sbjct: 272 ACSNLAALIEGKQMHAVICKSGFGS--NVFVASSAVDMYAKCGSLRESYIIFSEVQEKNL 329
Query: 309 FTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSN 368
++++I GFA H R + + LF +M + + PN VTF +L C H GLV++G+ F
Sbjct: 330 ELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL 389
Query: 369 MEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPD 428
M YG+ P+ HY+CM D+LGRAG L +A +L++++P +P ++WG+LL + V+ N +
Sbjct: 390 MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLE 449
Query: 429 VAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESR 488
+AE+ + LFELEP N GN++LLSN YA+ +W+++++ RKL+RD ++KK G SW++ +
Sbjct: 450 LAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIK 509
Query: 489 NGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFLLMAHS 548
+ V H F G+ HP I EI LD+L+ + + GY P++ +D+ +K LLM HS
Sbjct: 510 DKV-HTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHS 568
Query: 549 EKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFLNGA 608
EKLAL FGL+ S ++IMKNLRIC DCH M AS T R I+VRD RFHHF +G
Sbjct: 569 EKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGH 628
Query: 609 CSCGDFW 615
CSCGDFW
Sbjct: 629 CSCGDFW 635
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 400 bits (1028), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/610 (36%), Positives = 332/610 (54%), Gaps = 46/610 (7%)
Query: 14 SILNTC---TTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
++LN C LR +++HAH+ + ++Y+ T LL + R + +
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLL----IFYGKCDCLEDARKVLDE 112
Query: 71 VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTNLTLG 127
+P N ++A+I Y+ G +EAL ++ M P FTF+ + ++ + L LG
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG 172
Query: 128 TQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARN 187
Q+H + + S IFV ++++ MY K+G
Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAG------------------------------ 202
Query: 188 GDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAI 247
+ ARE+F+ L +D V+ TA++ GYAQ + +EALE F L GM + VT A +
Sbjct: 203 -QIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLL 261
Query: 248 SACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERN 307
+A + L C P VL S L+DMYSKCGN+ A +F M ER
Sbjct: 262 TALSGLALLDHGKQAHCHVLRREL-PFYAVLQNS-LIDMYSKCGNLSYARRLFDNMPERT 319
Query: 308 AFTYSSMIVGFAIHGRARAAIKLFYEML-ETEIKPNHVTFVGVLVACTHAGLVDQGQYLF 366
A ++++M+VG++ HG R ++LF M E +KP+ VT + VL C+H + D G +F
Sbjct: 320 AISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIF 379
Query: 367 SNM-EGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHG 425
M G YG P +HY C+ D+LGRAG +++A + ++ MP +P V G+LLGA VH
Sbjct: 380 DGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHL 439
Query: 426 NPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWV 485
+ D+ E V R L E+EP N GNY++LSN YASAGRW DV+ VR +M K + K PG SW+
Sbjct: 440 SVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWI 499
Query: 486 ESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFLLM 545
+ +H F A D HP E+ + ++ ++K GY+P+LS V YD+ +++K +L+
Sbjct: 500 QHEQ-TLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLL 558
Query: 546 AHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFL 605
HSEKLAL FGL+ T G I++ KNLRIC DCH SKV R++ +RD RFH +
Sbjct: 559 GHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIV 618
Query: 606 NGACSCGDFW 615
+G CSCGD+W
Sbjct: 619 DGICSCGDYW 628
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/511 (39%), Positives = 308/511 (60%), Gaps = 11/511 (2%)
Query: 6 RALEWQVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPR 65
R +E + L + K+++A I H L QSS+++T ++ + Y
Sbjct: 7 REVENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDK----IEDMDYAT 62
Query: 66 LLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSM-RNQRITPISFTFSALFSAVTNL 124
LF+QV +PN FLY+++IRAYT + + +R+Y + R P FTF +F + +L
Sbjct: 63 RLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASL 122
Query: 125 T---LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
LG Q+H H G + N +I MY+K L A KVFDEM +RDV+SW L+
Sbjct: 123 GSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLL 182
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
+ YAR G M A+ LF + K V+WTAM++GY EA++FFR ++ AG+E DE+
Sbjct: 183 SGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEI 242
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
+L + +CAQLG+ + W+ AE GF + V +AL++MYSKCG + +A +F
Sbjct: 243 SLISVLPSCAQLGSLELGKWIHLYAERRGF--LKQTGVCNALIEMYSKCGVISQAIQLFG 300
Query: 302 GMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
M+ ++ ++S+MI G+A HG A AI+ F EM ++KPN +TF+G+L AC+H G+ +
Sbjct: 301 QMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQE 360
Query: 362 GQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGAS 421
G F M Y + P +HY C+ D+L RAG LE+A+++ +TMP++P+ +WG+LL +
Sbjct: 361 GLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSC 420
Query: 422 HVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPG 481
GN DVA + HL ELEP ++GNY+LL+N YA G+W+DVSR+RK++R++N+KK PG
Sbjct: 421 RTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPG 480
Query: 482 YSWVESRNGVIHEFLAGDVKHPEINEIKKAL 512
S +E N ++ EF++GD P EI L
Sbjct: 481 GSLIEV-NNIVQEFVSGDNSKPFWTEISIVL 510
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/707 (31%), Positives = 366/707 (51%), Gaps = 106/707 (14%)
Query: 13 VSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVP 72
+S+L+ C TL+ + +HA + + LH ++Y ++ L+ + PH Y +F +
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILS-PHFEGLPYAISVFKTIQ 95
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN---LTLGTQ 129
PN +++ + R + L AL+LY M + + P S+TF + + G Q
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 130 LHAH---------------------------------------------ALLLGFAS--- 141
+H H AL+ G+AS
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215
Query: 142 --------------DIFVNNTMIKMYVKSGCLDSARKVFDEMPQ---------------- 171
D+ N MI Y ++G A ++F +M +
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 172 ----------RDVVSWTE-------------LITAYARNGDMNSARELFDELDVKDKVAW 208
R V W + LI Y++ G++ +A LF+ L KD ++W
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 335
Query: 209 TAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAES 268
++ GY + KEAL F+ + +G ++VT+ + ACA LGA W+ +
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395
Query: 269 SGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAI 328
G + ++L+DMY+KCG++E A+ VF + ++ ++++MI GFA+HGRA A+
Sbjct: 396 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 455
Query: 329 KLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADL 388
LF M + I+P+ +TFVG+L AC+H+G++D G+++F M Y + P +HY CM DL
Sbjct: 456 DLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDL 515
Query: 389 LGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNY 448
LG +G ++A +++ M +EP+G +W +LL A +HGN ++ E + +L ++EP N G+Y
Sbjct: 516 LGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSY 575
Query: 449 LLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEI 508
+LLSN YASAGRW++V++ R L+ DK +KK PG S +E + V+HEF+ GD HP EI
Sbjct: 576 VLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEI-DSVVHEFIIGDKFHPRNREI 634
Query: 509 KKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFLLMAHSEKLALAFGLLNTDAGSTIKI 568
L+++ L+ G++P+ S V ++ ++ K L HSEKLA+AFGL++T G+ + I
Sbjct: 635 YGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTI 694
Query: 569 MKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFLNGACSCGDFW 615
+KNLR+C +CH SK+ R+I+ RD RFHHF +G CSC D+W
Sbjct: 695 VKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/496 (39%), Positives = 301/496 (60%), Gaps = 35/496 (7%)
Query: 121 VTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTEL 180
+ ++ LG +H+ + GF S I+V N+++ +Y
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLY--------------------------- 33
Query: 181 ITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
A GD+ SA ++FD++ KD VAW +++ G+A+N P+EAL + + G++ D
Sbjct: 34 ----ANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDG 89
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
T+ +SACA++GA V G RN+ + L+D+Y++CG VEEA +F
Sbjct: 90 FTIVSLLSACAKIGALTLGKRVHVYMIKVGL--TRNLHSSNVLLDLYARCGRVEEAKTLF 147
Query: 301 RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETE-IKPNHVTFVGVLVACTHAGLV 359
M ++N+ +++S+IVG A++G + AI+LF M TE + P +TFVG+L AC+H G+V
Sbjct: 148 DEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMV 207
Query: 360 DQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLG 419
+G F M Y + P +H+ CM DLL RAG ++KA + +++MP++PN +W LLG
Sbjct: 208 KEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLG 267
Query: 420 ASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKN 479
A VHG+ D+AE + +LEPN+ G+Y+LLSN YAS RW DV ++RK M +KK
Sbjct: 268 ACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKV 327
Query: 480 PGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKE 539
PG+S VE N V HEFL GD HP+ + I L ++ RL++ GY+P +S+V D+ ++E
Sbjct: 328 PGHSLVEVGNRV-HEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEE 386
Query: 540 KRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNM 599
K ++ HSEK+A+AF L++T S I ++KNLR+C DCH+ + SKV R+IVVRD
Sbjct: 387 KENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRS 446
Query: 600 RFHHFLNGACSCGDFW 615
RFHHF NG+CSC D+W
Sbjct: 447 RFHHFKNGSCSCQDYW 462
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 151/331 (45%), Gaps = 51/331 (15%)
Query: 22 LRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSA 81
+R + +H+ + R Y+ +LL HL + +Y +F ++P + +++
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLL-HLYANCGDVA-SAYK--VFDKMPEKDLVAWNS 59
Query: 82 LIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTNLTLGTQLHAHALLLG 138
+I + G EAL LYT M ++ I P FT +L SA + LTLG ++H + + +G
Sbjct: 60 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 119
Query: 139 FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFD 198
++ +N ++ +Y + G ++ A+ +FDEM ++ VSWT LI A NG A ELF
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 179
Query: 199 ELDVKD-----KVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQL 253
++ + ++ + ++ + M KE E+FR +RE E + I
Sbjct: 180 YMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMRE------EYKIEPRIEH---- 229
Query: 254 GASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK-ERNAFTYS 312
FG +VD+ ++ G V++AY + M + N +
Sbjct: 230 -----------------FG---------CMVDLLARAGQVKKAYEYIKSMPMQPNVVIWR 263
Query: 313 SMIVGFAIHGRARAAIKLFYEMLETEIKPNH 343
+++ +HG + A ++L+ E PNH
Sbjct: 264 TLLGACTVHGDSDLAEFARIQILQLE--PNH 292
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/616 (35%), Positives = 337/616 (54%), Gaps = 48/616 (7%)
Query: 9 EWQVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLF 68
E + + +L C + KQ+HA + +L SS + + +Y +F
Sbjct: 30 EQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIF 89
Query: 69 SQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL-- 126
+ P F ++ +IR Y F EAL Y M + P +FT+ L A T L
Sbjct: 90 RGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIR 149
Query: 127 -GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYA 185
G Q+H LG +D+FV N++I M Y
Sbjct: 150 EGKQIHGQVFKLGLEADVFVQNSLINM-------------------------------YG 178
Query: 186 RNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCL-REAGMETDEVTLA 244
R G+M + +F++L+ K +W++MV+ A M E L FR + E ++ +E +
Sbjct: 179 RCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMV 238
Query: 245 GAISACAQ-----LGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNV 299
A+ ACA LG S +R I+E N++V ++LVDMY KCG +++A ++
Sbjct: 239 SALLACANTGALNLGMSIHGFLLRNISE-------LNIIVQTSLVDMYVKCGCLDKALHI 291
Query: 300 FRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLV 359
F+ M++RN TYS+MI G A+HG +A+++F +M++ ++P+HV +V VL AC+H+GLV
Sbjct: 292 FQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLV 351
Query: 360 DQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLG 419
+G+ +F+ M V P+A+HY C+ DLLGRAG LE+AL+ ++++P+E N +W L
Sbjct: 352 KEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
Query: 420 ASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKN 479
V N ++ +I ++ L +L +N G+YLL+SN Y+ WDDV+R R + K LK+
Sbjct: 412 QCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQT 471
Query: 480 PGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKE 539
PG+S VE + G H F++ D HP+ EI K L + +LK GY P+L+ + ++ ++E
Sbjct: 472 PGFSIVELK-GKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEE 530
Query: 540 KRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNM 599
K+ L HS+K+A+AFGLL T GS IKI +NLR+C DCH S + R+IVVRD
Sbjct: 531 KKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRN 590
Query: 600 RFHHFLNGACSCGDFW 615
RFH F G CSC D+W
Sbjct: 591 RFHLFKGGTCSCKDYW 606
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 391 bits (1004), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/627 (35%), Positives = 336/627 (53%), Gaps = 31/627 (4%)
Query: 12 VVSILNTCTTL---RRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLF 68
+V++L C +L KQLH + Q+ ++ L+ + + +F
Sbjct: 232 LVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV----DMYAKCGMMDEANTVF 287
Query: 69 SQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGT 128
S + + ++A++ Y+ G F +A+RL+ M+ ++I T+SA S LG
Sbjct: 288 SNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGY 347
Query: 129 QLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSW----------- 177
+ A + S N + + V SGC + + + +
Sbjct: 348 E--ALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGD 405
Query: 178 -----TELITAYARNGDMNSARELFDELDVK--DKVAWTAMVTGYAQNAMPKEALEFFRC 230
+LI YA+ +++AR +FD L K D V WT M+ GY+Q+ +ALE
Sbjct: 406 ENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSE 465
Query: 231 LREAGMET--DEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYS 288
+ E +T + T++ A+ ACA L A + + A + A + V + L+DMY+
Sbjct: 466 MFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQN-AVPLFVSNCLIDMYA 524
Query: 289 KCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVG 348
KCG++ +A VF M +N T++S++ G+ +HG A+ +F EM K + VT +
Sbjct: 525 KCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLV 584
Query: 349 VLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVE 408
VL AC+H+G++DQG F+ M+ +GV P +HYAC+ DLLGRAG L AL+L+E MP+E
Sbjct: 585 VLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPME 644
Query: 409 PNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVR 468
P VW A L +HG ++ E + + EL N+ G+Y LLSN YA+AGRW DV+R+R
Sbjct: 645 PPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIR 704
Query: 469 KLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNL 528
LMR K +KK PG SWVE G F GD HP EI + L D ++R+K IGY+P
Sbjct: 705 SLMRHKGVKKRPGCSWVEGIKGTT-TFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPET 763
Query: 529 SSVPYDIGDKEKRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKV 588
+D+ D+EK LL HSEKLALA+G+L T G+ I+I KNLR+C DCH S++
Sbjct: 764 GFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRI 823
Query: 589 TGRKIVVRDNMRFHHFLNGACSCGDFW 615
I++RD+ RFHHF NG+CSC +W
Sbjct: 824 IDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 187/384 (48%), Gaps = 30/384 (7%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQ-RITPISFTFSALFSAVTN 123
R +F ++ + ++++I +Y G AL +++ M N+ P + T + +
Sbjct: 182 RKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCAS 241
Query: 124 L---TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTEL 180
L +LG QLH A+ ++FV N ++ MY K G +D A VF M +DVVSW +
Sbjct: 242 LGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAM 301
Query: 181 ITAYARNGDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGM 236
+ Y++ G A LF+++ + D V W+A ++GYAQ + EAL R + +G+
Sbjct: 302 VAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGI 361
Query: 237 ETDEVTLAGAISACAQLGASKDADWVRCIA-------ESSGFGPARNVLVGSALVDMYSK 289
+ +EVTL +S CA +GA + C A +G G V+ + L+DMY+K
Sbjct: 362 KPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVI--NQLIDMYAK 419
Query: 290 CGNVEEAYNVFRGM--KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLE--TEIKPNHVT 345
C V+ A +F + KER+ T++ MI G++ HG A A++L EM E + +PN T
Sbjct: 420 CKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFT 479
Query: 346 FVGVLVACTHAGLVDQGQ----YLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQL 401
LVAC + G+ Y N + + S C+ D+ + G + A +
Sbjct: 480 ISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS----NCLIDMYAKCGSISDARLV 535
Query: 402 VETMPVEPNGAVWGALLGASHVHG 425
+ M + N W +L+ +HG
Sbjct: 536 FDNM-MAKNEVTWTSLMTGYGMHG 558
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/490 (25%), Positives = 214/490 (43%), Gaps = 96/490 (19%)
Query: 16 LNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPN 75
++ C T+ + K +H + + + NL HL +T+ + S+ L + P +
Sbjct: 35 IHKCKTISQVKLIHQKLLSFGI-----LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSD 89
Query: 76 PFLY--SALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTNLTLGTQL 130
+Y ++LIR+Y G + L L+ M + TP ++TF +F A ++++ G
Sbjct: 90 AGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESA 149
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDM 190
HA +L+ GF S++FV N ++ MY +R +
Sbjct: 150 HALSLVTGFISNVFVGNALVAMY-------------------------------SRCRSL 178
Query: 191 NSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFF-RCLREAGMETDEVTLAGAISA 249
+ AR++FDE+ V D V+W +++ YA+ PK ALE F R E G D +TL +
Sbjct: 179 SDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPP 238
Query: 250 CAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAF 309
CA LG + C A +S +N+ VG+ LVDMY+KCG ++EA VF M ++
Sbjct: 239 CASLGTHSLGKQLHCFAVTSEM--IQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVV 296
Query: 310 TYSSMIVGFAIHGRARAAIKLF----------------------------YE-------M 334
++++M+ G++ GR A++LF YE M
Sbjct: 297 SWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQM 356
Query: 335 LETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYA----------- 383
L + IKPN VT + VL C G + G+ + CY + D
Sbjct: 357 LSSGIKPNEVTLISVLSGCASVGALMHGKEIH-----CYAIKYPIDLRKNGHGDENMVIN 411
Query: 384 CMADLLGRAGHLEKALQLVETM-PVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEP 442
+ D+ + ++ A + +++ P E + W ++G HG+ + A + +FE +
Sbjct: 412 QLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDC 471
Query: 443 NNIGNYLLLS 452
N +S
Sbjct: 472 QTRPNAFTIS 481
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 131/310 (42%), Gaps = 16/310 (5%)
Query: 178 TELITAYARNGDMNSARELFDELDVKDKVA--WTAMVTGYAQNAMPKEALEFFRCLREAG 235
+ LI+ Y G ++ A L D W +++ Y N + L F +
Sbjct: 63 SHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLS 122
Query: 236 METDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEE 295
D T AC ++ + + + ++ +GF NV VG+ALV MYS+C ++ +
Sbjct: 123 WTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGF--ISNVFVGNALVAMYSRCRSLSD 180
Query: 296 AYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEML-ETEIKPNHVTFVGVLVACT 354
A VF M + +++S+I +A G+ + A+++F M E +P+++T V VL C
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 355 HAGLVDQGQYLFSNMEGCYGVVPSADHYA----CMADLLGRAGHLEKALQLVETMPVEPN 410
G G+ L C+ V C+ D+ + G +++A + M V+ +
Sbjct: 241 SLGTHSLGKQLH-----CFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-D 294
Query: 411 GAVWGALL-GASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRK 469
W A++ G S + D + + E ++ + + YA G + V +
Sbjct: 295 VVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCR 354
Query: 470 LMRDKNLKKN 479
M +K N
Sbjct: 355 QMLSSGIKPN 364
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/589 (36%), Positives = 321/589 (54%), Gaps = 55/589 (9%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL 126
LF ++P N ++ ++ + G +A +LY + ++ A S + L
Sbjct: 132 LFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNI-------ARTSMIHGLCK 184
Query: 127 GTQLHAHALLLGFASD--IFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAY 184
++ + S+ + TM+ Y ++ +D ARK+FD MP++ VSWT ++ Y
Sbjct: 185 EGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGY 244
Query: 185 ARNGDMNSARELFDELDVKDKVAWTAMVTGYAQ--------------------------- 217
+NG + A ELF+ + VK +A AM++G Q
Sbjct: 245 VQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIK 304
Query: 218 ----NAMPKEALEFFRCLREAGMETDEVTLAGAISACAQL-----GASKDADWVRCIAES 268
N EAL+ F +++ G+ TL +S CA L G A VRC +
Sbjct: 305 IHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDV 364
Query: 269 SGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAI 328
+V V S L+ MY KCG + ++ +F ++ ++S+I G+A HG A+
Sbjct: 365 -------DVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEAL 417
Query: 329 KLFYEM-LETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMAD 387
K+F EM L KPN VTFV L AC++AG+V++G ++ +ME +GV P HYACM D
Sbjct: 418 KVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVD 477
Query: 388 LLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGN 447
+LGRAG +A++++++M VEP+ AVWG+LLGA H DVAE ++ L E+EP N G
Sbjct: 478 MLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGT 537
Query: 448 YLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVK-HPEIN 506
Y+LLSN YAS GRW DV+ +RKLM+ + ++K+PG SW E N V H F G + HPE
Sbjct: 538 YILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKV-HAFTRGGINSHPEQE 596
Query: 507 EIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFLLMAHSEKLALAFGLLNTDAGSTI 566
I K LD+L L+ GY P+ S +D+ ++EK L HSE+LA+A+ LL G I
Sbjct: 597 SILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPI 656
Query: 567 KIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFLNGACSCGDFW 615
++MKNLR+C DCH + SKV R+I++RD RFHHF NG CSC D+W
Sbjct: 657 RVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 144/297 (48%), Gaps = 36/297 (12%)
Query: 147 NTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKV 206
N+M+ Y + ARK+FDEMP R+++SW L++ Y +NG+++ AR++FD + ++ V
Sbjct: 52 NSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV 111
Query: 207 AWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIA 266
+WTA+V GY N A F + E + V L G + Q G DA
Sbjct: 112 SWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFL----QDGRIDDA------C 161
Query: 267 ESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARA 326
+ P ++ + ++++ K G V+EA +F M ER+ T+++M+ G+ + R
Sbjct: 162 KLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDD 221
Query: 327 AIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYAC-- 384
A K+F M E V++ +L+ G ++ + LF V+P AC
Sbjct: 222 ARKIFDVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFE-------VMPVKPVIACNA 270
Query: 385 MADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELE 441
M LG+ G + KA ++ ++M E N A W ++ +I R+ FELE
Sbjct: 271 MISGLGQKGEIAKARRVFDSMK-ERNDASWQTVI------------KIHERNGFELE 314
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 166/393 (42%), Gaps = 81/393 (20%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALF------ 118
R LF ++P N ++ L+ Y G EA +++ M + + +++AL
Sbjct: 68 RKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV----SWTALVKGYVHN 123
Query: 119 -------SAVTNLTLGTQLHAHALLLGFASDIFVNN-----------------TMIKMYV 154
S + ++ +L+GF D +++ +MI
Sbjct: 124 GKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLC 183
Query: 155 KSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTG 214
K G +D AR++FDEM +R V++WT ++T Y +N ++ AR++FD + K +V+WT+M+ G
Sbjct: 184 KEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMG 243
Query: 215 YAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPA 274
Y QN ++A E F + P
Sbjct: 244 YVQNGRIEDAEELFEVM-----------------------------------------PV 262
Query: 275 RNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEM 334
+ V+ +A++ + G + +A VF MKERN ++ ++I +G A+ LF M
Sbjct: 263 KPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILM 322
Query: 335 LETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHY--ACMADLLGRA 392
+ ++P T + +L C + G+ + + + C V D Y + + + +
Sbjct: 323 QKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDV---DVYVASVLMTMYIKC 379
Query: 393 GHLEKALQLVETMPVEPNGAVWGALLGASHVHG 425
G L K+ + + P + + +W +++ HG
Sbjct: 380 GELVKSKLIFDRFPSK-DIIMWNSIISGYASHG 411
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 147/349 (42%), Gaps = 64/349 (18%)
Query: 147 NTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKV 206
N I + G + ARK+FD + + SW ++ Y N AR+LFDE+ ++ +
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 207 AWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIA 266
+W +V+GY +N EA + F +
Sbjct: 81 SWNGLVSGYMKNGEIDEARKVFDLM----------------------------------- 105
Query: 267 ESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARA 326
P RNV+ +ALV Y G V+ A ++F M E+N +++ M++GF GR
Sbjct: 106 ------PERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDD 159
Query: 327 AIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMA 386
A KL YEM+ + +++ ++ G VD+ + +F M S + M
Sbjct: 160 ACKL-YEMIPDK---DNIARTSMIHGLCKEGRVDEAREIFDEMSE-----RSVITWTTMV 210
Query: 387 DLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIG 446
G+ ++ A ++ + MP E W ++L +G + AE LFE+ P +
Sbjct: 211 TGYGQNNRVDDARKIFDVMP-EKTEVSWTSMLMGYVQNGRIEDAE----ELFEVMP--VK 263
Query: 447 NYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSW-----VESRNG 490
+ + + G+ ++++ R++ ++K+ SW + RNG
Sbjct: 264 PVIACNAMISGLGQKGEIAKARRVF--DSMKERNDASWQTVIKIHERNG 310
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 118/278 (42%), Gaps = 35/278 (12%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFS---AV 121
R +F + N + +I+ + G EAL L+ M+ Q + P T ++ S ++
Sbjct: 285 RRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASL 344
Query: 122 TNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
+L G Q+HA + F D++V + ++ MY+K G L ++ +FD P +D++ W +I
Sbjct: 345 ASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSII 404
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
+ YA +G A ++F E+ + + +EV
Sbjct: 405 SGYASHGLGEEALKVFCEMPLS------------------------------GSTKPNEV 434
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
T +SAC+ G ++ + ES FG + +VDM + G EA +
Sbjct: 435 TFVATLSACSYAGMVEEGLKIYESMESV-FGVKPITAHYACMVDMLGRAGRFNEAMEMID 493
Query: 302 GMK-ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETE 338
M E +A + S++ H + A +++E E
Sbjct: 494 SMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIE 531
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/617 (35%), Positives = 346/617 (56%), Gaps = 58/617 (9%)
Query: 14 SILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLL-RHLTTTFPHLPIHSYPRLLFSQVP 72
+++ C + + KQL +H QSS++ + LL R + F L S+ +F +P
Sbjct: 8 TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDL---SFAVQIFRYIP 64
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQ--------RITPI--SFTFSALFSAVT 122
P ++A+IR + + A Y SM Q R+ + SFT A A+
Sbjct: 65 KPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALC 124
Query: 123 NLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELIT 182
+ + QLH G ++D + T L+
Sbjct: 125 SSAM-DQLHCQINRRGLSADSLLCTT-------------------------------LLD 152
Query: 183 AYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
AY++NGD+ SA +LFDE+ V+D +W A++ G EA+E ++ + G+ EVT
Sbjct: 153 AYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVT 212
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
+ A+ AC+ LG K+ + + G+ NV+V +A +DMYSKCG V++AY VF
Sbjct: 213 VVAALGACSHLGDVKEGENI-----FHGYSN-DNVIVSNAAIDMYSKCGFVDKAYQVFEQ 266
Query: 303 MK-ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
+++ T+++MI GFA+HG A A+++F ++ + IKP+ V+++ L AC HAGLV+
Sbjct: 267 FTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEY 326
Query: 362 GQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGAS 421
G +F+NM C GV + HY C+ DLL RAG L +A ++ +M + P+ +W +LLGAS
Sbjct: 327 GLSVFNNM-ACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGAS 385
Query: 422 HVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPG 481
++ + ++AEI SR + E+ NN G+++LLSN YA+ GRW DV RVR M K +KK PG
Sbjct: 386 EIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPG 445
Query: 482 YSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKR 541
S++E++ G IHEF D H + EI + +D++ +++ GY+ V +DIG++EK
Sbjct: 446 LSYIEAK-GTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKE 504
Query: 542 FLLMAHSEKLALAFGLLNTDAG---STIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDN 598
L HSEKLA+A+GL+ D S ++++ NLRIC DCH+V SK+ R+I+VRD
Sbjct: 505 NALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRICGDCHVVFKHISKIYKREIIVRDR 564
Query: 599 MRFHHFLNGACSCGDFW 615
+RFH F +G+CSC DFW
Sbjct: 565 VRFHRFKDGSCSCRDFW 581
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/627 (34%), Positives = 347/627 (55%), Gaps = 58/627 (9%)
Query: 9 EWQVVSILNTCT---TLRRAKQLHAHIYRH-NLHQSSYIITNLLRHLTTTFPHLPIHSYP 64
E+ + S+L C+ LR K+LHA+ ++ +L ++S++ + L+ L
Sbjct: 302 EFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLS----G 357
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQR-ITPISFTFSALFSAVTN 123
R +F + L++A+I Y+ EAL L+ M + S T + + A
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417
Query: 124 ---LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTEL 180
+ +H + G D FV NT++ MY
Sbjct: 418 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMY--------------------------- 450
Query: 181 ITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLR-------- 232
+R G ++ A +F +++ +D V W M+TGY + ++AL ++
Sbjct: 451 ----SRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 506
Query: 233 ---EAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSK 289
++ + +TL + +CA L A + A + A +V VGSALVDMY+K
Sbjct: 507 GASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNL--ATDVAVGSALVDMYAK 564
Query: 290 CGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGV 349
CG ++ + VF + ++N T++ +I+ + +HG + AI L M+ +KPN VTF+ V
Sbjct: 565 CGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISV 624
Query: 350 LVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEP 409
AC+H+G+VD+G +F M+ YGV PS+DHYAC+ DLLGRAG +++A QL+ MP +
Sbjct: 625 FAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDF 684
Query: 410 NGA-VWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVR 468
N A W +LLGAS +H N ++ EI +++L +LEPN +Y+LL+N Y+SAG WD + VR
Sbjct: 685 NKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVR 744
Query: 469 KLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNL 528
+ M+++ ++K PG SW+E + V H+F+AGD HP+ ++ L+ L ER++ GY+P+
Sbjct: 745 RNMKEQGVRKEPGCSWIEHGDEV-HKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDT 803
Query: 529 SSVPYDIGDKEKRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKV 588
S V +++ + EK LL HSEKLA+AFG+LNT G+ I++ KNLR+C DCH+ SK+
Sbjct: 804 SCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKI 863
Query: 589 TGRKIVVRDNMRFHHFLNGACSCGDFW 615
R+I++RD RFH F NG CSCGD+W
Sbjct: 864 VDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 173/394 (43%), Gaps = 56/394 (14%)
Query: 25 AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIR 84
KQ+HAH+Y+ S + N L +L + +F ++ N +++LI
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNL---YRKCGDFGAVYKVFDRISERNQVSWNSLIS 172
Query: 85 AYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL------TLGTQLHAHALLLG 138
+ + AL + M ++ + P SFT ++ +A +NL +G Q+HA+ L G
Sbjct: 173 SLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG 232
Query: 139 FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFD 198
+ F+ NT++ MY K G L S++ + RD+V+W ++++
Sbjct: 233 ELNS-FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSS--------------- 276
Query: 199 ELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKD 258
QN EALE+ R + G+E DE T++ + AC+ L +
Sbjct: 277 ----------------LCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRT 320
Query: 259 ADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGF 318
+ A +G N VGSALVDMY C V VF GM +R +++MI G+
Sbjct: 321 GKELHAYALKNG-SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGY 379
Query: 319 AIHGRARAAIKLFYEMLETE-IKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVP 377
+ + + A+ LF M E+ + N T GV+ AC +G FS E +G V
Sbjct: 380 SQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG-------AFSRKEAIHGFVV 432
Query: 378 S----ADHYA--CMADLLGRAGHLEKALQLVETM 405
D + + D+ R G ++ A+++ M
Sbjct: 433 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 131/306 (42%), Gaps = 37/306 (12%)
Query: 64 PRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN 123
P + SQ SP ++ L+R+ EA+ Y M I P ++ F AL AV +
Sbjct: 52 PSIFISQSRSPEWWI--DLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVAD 109
Query: 124 LT---LGTQLHAHALLLGFASD-IFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTE 179
L LG Q+HAH G+ D + V NT++ +Y K G
Sbjct: 110 LQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG---------------------- 147
Query: 180 LITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETD 239
D + ++FD + +++V+W ++++ + ALE FRC+ + +E
Sbjct: 148 ---------DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPS 198
Query: 240 EVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNV 299
TL ++AC+ L + + + N + + LV MY K G + + +
Sbjct: 199 SFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVL 258
Query: 300 FRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLV 359
R+ T+++++ + + A++ EM+ ++P+ T VL AC+H ++
Sbjct: 259 LGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEML 318
Query: 360 DQGQYL 365
G+ L
Sbjct: 319 RTGKEL 324
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 387 bits (995), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/619 (34%), Positives = 340/619 (54%), Gaps = 51/619 (8%)
Query: 6 RALEWQVVSILNTCTTL---RRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHS 62
R E S++ C L R +QLH + ++ I T L+ + L
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLD--- 348
Query: 63 YPRLLFSQVPS-PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV 121
LF ++ N ++A+I + EA+ L++ M+ + + P FT+S + +A+
Sbjct: 349 -ALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL 407
Query: 122 TNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
++ +++HA + + +R T L+
Sbjct: 408 PVIS-PSEVHAQVVKTNY-------------------------------ERSSTVGTALL 435
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
AY + G + A ++F +D KD VAW+AM+ GYAQ + A++ F L + G++ +E
Sbjct: 436 DAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEF 495
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPAR----NVLVGSALVDMYSKCGNVEEAY 297
T + ++ CA AS + GF ++ V SAL+ MY+K GN+E A
Sbjct: 496 TFSSILNVCAATNASMGQG-----KQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAE 550
Query: 298 NVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAG 357
VF+ +E++ +++SMI G+A HG+A A+ +F EM + ++K + VTF+GV ACTHAG
Sbjct: 551 EVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAG 610
Query: 358 LVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGAL 417
LV++G+ F M + P+ +H +CM DL RAG LEKA++++E MP +W +
Sbjct: 611 LVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTI 670
Query: 418 LGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLK 477
L A VH ++ + + + ++P + Y+LLSN YA +G W + ++VRKLM ++N+K
Sbjct: 671 LAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVK 730
Query: 478 KNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGD 537
K PGYSW+E +N + FLAGD HP ++I L+DL RLK +GY P+ S V DI D
Sbjct: 731 KEPGYSWIEVKNKT-YSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDD 789
Query: 538 KEKRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRD 597
+ K +L HSE+LA+AFGL+ T GS + I+KNLR+C DCH+V+ +K+ R+IVVRD
Sbjct: 790 EHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRD 849
Query: 598 NMRFHHF-LNGACSCGDFW 615
+ RFHHF +G CSCGDFW
Sbjct: 850 SNRFHHFSSDGVCSCGDFW 868
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 186/450 (41%), Gaps = 79/450 (17%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT- 125
LF + P + Y +L+ ++ G EA RL+ ++ + FS++ L
Sbjct: 49 LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCD 108
Query: 126 --LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
G QLH + GF D+ V +++ Y+K RKVFDEM +R+VV+WT LI+
Sbjct: 109 ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISG 168
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
YAR N+M E L F ++ G + + T
Sbjct: 169 YAR-------------------------------NSMNDEVLTLFMRMQNEGTQPNSFTF 197
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
A A+ A+ G V + +G + + V ++L+++Y KCGNV +A +F
Sbjct: 198 AAALGVLAEEGVGGRGLQVHTVVVKNGLD--KTIPVSNSLINLYLKCGNVRKARILFDKT 255
Query: 304 KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACT--------- 354
+ ++ T++SMI G+A +G A+ +FY M ++ + +F V+ C
Sbjct: 256 EVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTE 315
Query: 355 --HAGLVDQGQYLFSNME-----------------------GCYGVVPSADHYACMADLL 389
H +V G N+ GC G V S A ++ L
Sbjct: 316 QLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVS--WTAMISGFL 373
Query: 390 GRAGHLEKALQLVETMP---VEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIG 446
G E+A+ L M V PN + +L A V +V V + +E + +G
Sbjct: 374 QNDGK-EEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYE-RSSTVG 431
Query: 447 NYLLLSNTYASAGRWDDVSRVRKLMRDKNL 476
LL + Y G+ ++ ++V + DK++
Sbjct: 432 TALL--DAYVKLGKVEEAAKVFSGIDDKDI 459
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 131/292 (44%), Gaps = 37/292 (12%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL 124
R +F ++ N ++ LI Y E L L+ M+N+ P SFTF+A +
Sbjct: 148 RKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEE 207
Query: 125 TL---GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
+ G Q+H + G I V+N++I +Y+K G + AR +FD+ + VV+W +I
Sbjct: 208 GVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMI 267
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
+ YA NG LD+ EAL F +R + E
Sbjct: 268 SGYAANG-----------LDL--------------------EALGMFYSMRLNYVRLSES 296
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
+ A I CA L + + + C GF +N+ +AL+ YSKC + +A +F+
Sbjct: 297 SFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR--TALMVAYSKCTAMLDALRLFK 354
Query: 302 GMK-ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVA 352
+ N ++++MI GF + A+ LF EM ++PN T+ +L A
Sbjct: 355 EIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 110/236 (46%), Gaps = 8/236 (3%)
Query: 192 SARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACA 251
+A LFD+ +D+ ++ +++ G++++ +EA F + GME D + + A
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 252 QLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTY 311
L + C + FG +V VG++LVD Y K N ++ VF MKERN T+
Sbjct: 105 TLCDELFGRQLHC--QCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 312 SSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNM-- 369
+++I G+A + + LF M +PN TF L G+ +G + + +
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 370 EGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHG 425
G +P ++ + +L + G++ KA L + V+ + W +++ +G
Sbjct: 223 NGLDKTIPVSNS---LINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISGYAANG 274
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 386 bits (992), Expect = e-107, Method: Compositional matrix adjust.
Identities = 226/607 (37%), Positives = 337/607 (55%), Gaps = 39/607 (6%)
Query: 12 VVSILNTCTTLRR---AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLF 68
+VS+L + LR K++H + R + N+ L + R LF
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDS----LVNISTALVDMYAKCGSLETARQLF 294
Query: 69 SQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGT 128
+ N ++++I AY EA+ ++ M ++ + P T++++
Sbjct: 295 DGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP------------TDVSVMG 342
Query: 129 QLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNG 188
LHA A L F++ K+ V+ G LD R+V LI+ Y +
Sbjct: 343 ALHACADLGDLERGRFIH----KLSVELG-LD-----------RNVSVVNSLISMYCKCK 386
Query: 189 DMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAIS 248
++++A +F +L + V+W AM+ G+AQN P +AL +F +R ++ D T I+
Sbjct: 387 EVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVIT 446
Query: 249 ACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNA 308
A A+L + A W+ + S +NV V +ALVDMY+KCG + A +F M ER+
Sbjct: 447 AIAELSITHHAKWIHGVVMRSCLD--KNVFVTTALVDMYAKCGAIMIARLIFDMMSERHV 504
Query: 309 FTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSN 368
T+++MI G+ HG +AA++LF EM + IKPN VTF+ V+ AC+H+GLV+ G F
Sbjct: 505 TTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYM 564
Query: 369 MEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPD 428
M+ Y + S DHY M DLLGRAG L +A + MPV+P V+GA+LGA +H N +
Sbjct: 565 MKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVN 624
Query: 429 VAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESR 488
AE + LFEL P++ G ++LL+N Y +A W+ V +VR M + L+K PG S VE +
Sbjct: 625 FAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIK 684
Query: 489 NGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFLLMAHS 548
N V H F +G HP+ +I L+ L+ +K GY+P+ +++ + + K LL HS
Sbjct: 685 NEV-HSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPD-TNLVLGVENDVKEQLLSTHS 742
Query: 549 EKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFLNGA 608
EKLA++FGLLNT AG+TI + KNLR+C DCH S VTGR+IVVRD RFHHF NGA
Sbjct: 743 EKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGA 802
Query: 609 CSCGDFW 615
CSCGD+W
Sbjct: 803 CSCGDYW 809
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 169/354 (47%), Gaps = 40/354 (11%)
Query: 15 ILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSP 74
+L C++L+ +Q+ ++++ L+Q + T L+ + F +F + S
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLV----SLFCRYGSVDEAARVFEPIDSK 98
Query: 75 NPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN---LTLGTQLH 131
LY +++ + +AL+ + MR + P+ + F+ L + L +G ++H
Sbjct: 99 LNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 158
Query: 132 AHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMN 191
+ GF+ D+F + T L YA+ +N
Sbjct: 159 GLLVKSGFSLDLF-------------------------------AMTGLENMYAKCRQVN 187
Query: 192 SARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACA 251
AR++FD + +D V+W +V GY+QN M + ALE + + E ++ +T+ + A +
Sbjct: 188 EARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVS 247
Query: 252 QLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTY 311
L + A SGF N + +ALVDMY+KCG++E A +F GM ERN ++
Sbjct: 248 ALRLISVGKEIHGYAMRSGFDSLVN--ISTALVDMYAKCGSLETARQLFDGMLERNVVSW 305
Query: 312 SSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYL 365
+SMI + + + A+ +F +ML+ +KP V+ +G L AC G +++G+++
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 139/272 (51%), Gaps = 10/272 (3%)
Query: 178 TELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGME 237
T+L++ + R G ++ A +F+ +D K V + M+ G+A+ + +AL+FF +R +E
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 238 TDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAY 297
+ C + + + SGF + ++ + L +MY+KC V EA
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF--SLDLFAMTGLENMYAKCRQVNEAR 190
Query: 298 NVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAG 357
VF M ER+ ++++++ G++ +G AR A+++ M E +KP+ +T V VL A +
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 250
Query: 358 LVDQGQYL--FSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWG 415
L+ G+ + ++ G +V + + D+ + G LE A QL + M +E N W
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVNIS---TALVDMYAKCGSLETARQLFDGM-LERNVVSWN 306
Query: 416 ALLGASHVHGNPDVAEIVSRHLFE--LEPNNI 445
+++ A + NP A ++ + + + ++P ++
Sbjct: 307 SMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 338
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 384 bits (986), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/625 (34%), Positives = 347/625 (55%), Gaps = 56/625 (8%)
Query: 11 QVVSILNTCTTLRRAKQLHAHIYRHNLHQ--SSYIITNLLRHLTTTFPHLPIHSYPRLLF 68
++ S+ TC+ + + KQLHA R + ++ + + L+++F + +Y +F
Sbjct: 50 RIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDV---NYAFRVF 106
Query: 69 SQVPSPNPFLYSALIRAYTLR-GPFTEALRLYTSMRNQ-RITPISFTFSALFSA---VTN 123
+ + + F+++ LIRA EA LY M + +P TF + A +
Sbjct: 107 DSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 166
Query: 124 LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
+ G Q+H + GF D++VNN +I +Y GCLD A
Sbjct: 167 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLA--------------------- 205
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
R++FDE+ + V+W +M+ + AL+ FR ++ + E D T+
Sbjct: 206 ----------RKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTM 254
Query: 244 AGAISACAQLGASKDADWVRC-IAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
+SACA LG+ W + A +VLV ++L++MY KCG++ A VF+G
Sbjct: 255 QSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQG 314
Query: 303 MKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETE--IKPNHVTFVGVLVACTHAGLVD 360
M++R+ ++++MI+GFA HGRA A+ F M++ ++PN VTFVG+L+AC H G V+
Sbjct: 315 MQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVN 374
Query: 361 QGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGA 420
+G+ F M Y + P+ +HY C+ DL+ RAG++ +A+ +V +MP++P+ +W +LL A
Sbjct: 375 KGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDA 434
Query: 421 SHVHG-NPDVAEIVSRHLFELEPNN-------IGNYLLLSNTYASAGRWDDVSRVRKLMR 472
G + +++E ++R++ + +N G Y+LLS YASA RW+DV VRKLM
Sbjct: 435 CCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMS 494
Query: 473 DKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVP 532
+ ++K PG S +E NG+ HEF AGD HP+ +I + L + +RL++IGYLP+ S P
Sbjct: 495 EHGIRKEPGCSSIEI-NGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAP 553
Query: 533 Y--DIGDKEKRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTG 590
D K + L HSE+LA+AFGL+N + I+I KNLR+C DCH V SKV
Sbjct: 554 LVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFN 613
Query: 591 RKIVVRDNMRFHHFLNGACSCGDFW 615
+I+VRD +RFHHF +G+CSC D+W
Sbjct: 614 TEIIVRDRVRFHHFKDGSCSCLDYW 638
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/605 (34%), Positives = 332/605 (54%), Gaps = 53/605 (8%)
Query: 14 SILNTCTTLR---RAKQLHAHI----YRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRL 66
++L CT + + + +HAHI +RH++ ++ N L ++ L R
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDI-----VMGNTLLNMYAKCGSL---EEARK 116
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT---N 123
+F ++P + ++ LI Y+ +AL + M +P FT S++ A
Sbjct: 117 VFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERR 176
Query: 124 LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
G QLH + GF S++ V + ++ +Y
Sbjct: 177 GCCGHQLHGFCVKCGFDSNVHVGSALLDLYT----------------------------- 207
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
R G M+ A+ +FD L+ ++ V+W A++ G+A+ + ++ALE F+ + G +
Sbjct: 208 --RYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSY 265
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
A AC+ G + WV SG G+ L+DMY+K G++ +A +F +
Sbjct: 266 ASLFGACSSTGFLEQGKWVHAYMIKSG--EKLVAFAGNTLLDMYAKSGSIHDARKIFDRL 323
Query: 304 KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQ 363
+R+ +++S++ +A HG + A+ F EM I+PN ++F+ VL AC+H+GL+D+G
Sbjct: 324 AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGW 383
Query: 364 YLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHV 423
+ + M+ G+VP A HY + DLLGRAG L +AL+ +E MP+EP A+W ALL A +
Sbjct: 384 HYYELMKK-DGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRM 442
Query: 424 HGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYS 483
H N ++ + H+FEL+P++ G +++L N YAS GRW+D +RVRK M++ +KK P S
Sbjct: 443 HKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACS 502
Query: 484 WVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFL 543
WVE N IH F+A D +HP+ EI + +++L ++K +GY+P+ S V + +E+
Sbjct: 503 WVEIENA-IHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVN 561
Query: 544 LMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHH 603
L HSEK+ALAF LLNT GSTI I KN+R+C DCH + ASKV GR+I+VRD RFHH
Sbjct: 562 LQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHH 621
Query: 604 FLNGA 608
F + +
Sbjct: 622 FKDAS 626
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/560 (36%), Positives = 304/560 (54%), Gaps = 48/560 (8%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL 124
R+LF ++P + Y+ +I +Y+ + +L + M+ +F F+ + S NL
Sbjct: 305 RMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANL 364
Query: 125 T---LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
+ +G QLH ALL S + V N+++ MY K + A +F +PQR V
Sbjct: 365 SSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTV------ 418
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
+WTA+++GY Q + L+ F +R + + D+
Sbjct: 419 -------------------------SWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQS 453
Query: 242 TLAGAISACAQ-----LGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEA 296
T A + A A LG A +R G NV GS LVDMY+KCG++++A
Sbjct: 454 TFATVLKASASFASLLLGKQLHAFIIRS-------GNLENVFSGSGLVDMYAKCGSIKDA 506
Query: 297 YNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHA 356
VF M +RNA +++++I A +G AAI F +M+E+ ++P+ V+ +GVL AC+H
Sbjct: 507 VQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHC 566
Query: 357 GLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGA 416
G V+QG F M YG+ P HYACM DLLGR G +A +L++ MP EP+ +W +
Sbjct: 567 GFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSS 626
Query: 417 LLGASHVHGNPDVAEIVSRHLFELEP-NNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKN 475
+L A +H N +AE + LF +E + Y+ +SN YA+AG W+ V V+K MR++
Sbjct: 627 VLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERG 686
Query: 476 LKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDI 535
+KK P YSWVE N IH F + D HP +EI + +++L ++ GY P+ SSV D+
Sbjct: 687 IKKVPAYSWVEV-NHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDV 745
Query: 536 GDKEKRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVV 595
++ K L HSE+LA+AF L++T G I +MKNLR C DCH + SK+ R+I V
Sbjct: 746 DEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITV 805
Query: 596 RDNMRFHHFLNGACSCGDFW 615
RD RFHHF G CSCGD+W
Sbjct: 806 RDTSRFHHFSEGVCSCGDYW 825
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 181/392 (46%), Gaps = 54/392 (13%)
Query: 66 LLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL- 124
+LF ++P + ++ LI Y G +TE++ L+ MR P FTFS + AV L
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH 264
Query: 125 --TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELIT 182
LG QLHA ++ GF+ D V N ++ Y K D V T
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSK----------------HDRVLET---- 304
Query: 183 AYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
R LFDE+ D V++ +++ Y+Q + +L FFR ++ G +
Sbjct: 305 -----------RMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFP 353
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVL-VGSALVDMYSKCGNVEEAYNVFR 301
A +S A L + + + C A A ++L VG++LVDMY+KC EEA +F+
Sbjct: 354 FATMLSIAANLSSLQMGRQLHCQAL---LATADSILHVGNSLVDMYAKCEMFEEAELIFK 410
Query: 302 GMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
+ +R +++++I G+ G A +KLF +M + ++ + TF VL A +
Sbjct: 411 SLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLL 470
Query: 362 GQYLFS------NMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWG 415
G+ L + N+E + D YA + G ++ A+Q+ E MP + N W
Sbjct: 471 GKQLHAFIIRSGNLENVFSGSGLVDMYA-------KCGSIKDAVQVFEEMP-DRNAVSWN 522
Query: 416 ALLGASHVHGNPDVAEIVSRHLFE--LEPNNI 445
AL+ A +G+ + A + E L+P+++
Sbjct: 523 ALISAHADNGDGEAAIGAFAKMIESGLQPDSV 554
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 118/226 (52%), Gaps = 2/226 (0%)
Query: 129 QLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNG 188
++ A + GF +D +N +++ ++ G + +ARKV+DEMP ++ VS +I+ + + G
Sbjct: 34 RVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTG 93
Query: 189 DMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFR--CLREAGMETDEVTLAGA 246
D++SAR+LFD + + V WT ++ YA+N+ EA + FR C + D VT
Sbjct: 94 DVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTL 153
Query: 247 ISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER 306
+ C V A GF + V + L+ Y + ++ A +F + E+
Sbjct: 154 LPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK 213
Query: 307 NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVA 352
++ T++++I G+ G +I LF +M ++ +P+ TF GVL A
Sbjct: 214 DSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 148/329 (44%), Gaps = 46/329 (13%)
Query: 12 VVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
++SI ++L+ +QLH L ++ I ++ L + + L+F +
Sbjct: 357 MLSIAANLSSLQMGRQLHCQA----LLATADSILHVGNSLVDMYAKCEMFEEAELIFKSL 412
Query: 72 PSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTNLTLGT 128
P ++ALI Y +G L+L+T MR + TF+ + A +L LG
Sbjct: 413 PQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGK 472
Query: 129 QLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNG 188
QLHA + G ++F + ++ MY K G + A +VF+EMP R+ VSW LI+A+A NG
Sbjct: 473 QLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNG 532
Query: 189 DMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAIS 248
D +A + +A+ + E+G++ D V++ G ++
Sbjct: 533 DGEAA------------------IGAFAK-------------MIESGLQPDSVSILGVLT 561
Query: 249 ACAQLG-ASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK-ER 306
AC+ G + ++ + ++ G P + + ++D+ + G EA + M E
Sbjct: 562 ACSHCGFVEQGTEYFQAMSPIYGITPKKKHY--ACMLDLLGRNGRFAEAEKLMDEMPFEP 619
Query: 307 NAFTYSSMIVGFAIHGRA----RAAIKLF 331
+ +SS++ IH RAA KLF
Sbjct: 620 DEIMWSSVLNACRIHKNQSLAERAAEKLF 648
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 160/371 (43%), Gaps = 52/371 (14%)
Query: 62 SYPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSM-RNQRIT-PISFTFSALF- 118
S R LF +P ++ L+ Y F EA +L+ M R+ T P TF+ L
Sbjct: 96 SSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLP 155
Query: 119 ---SAVTNLTLGTQLHAHALLLGFASDIF--VNNTMIKMYVKSGCLDSARKVFDEMPQRD 173
AV +G Q+HA A+ LGF ++ F V+N ++K Y + LD A +F+E+P
Sbjct: 156 GCNDAVPQNAVG-QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP--- 211
Query: 174 VVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLRE 233
KD V + ++TGY ++ + E++ F +R+
Sbjct: 212 ----------------------------EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQ 243
Query: 234 AGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNV 293
+G + + T +G + A L + ++ ++GF +R+ VG+ ++D YSK V
Sbjct: 244 SGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGF--SRDASVGNQILDFYSKHDRV 301
Query: 294 EEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVAC 353
E +F M E + +Y+ +I ++ + A++ F EM + F +L
Sbjct: 302 LETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIA 361
Query: 354 THAGLVDQGQYLFSNMEGCYGVVPSADHYA----CMADLLGRAGHLEKALQLVETMPVEP 409
+ + G+ L C ++ +AD + D+ + E+A + +++P +
Sbjct: 362 ANLSSLQMGRQLH-----CQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP-QR 415
Query: 410 NGAVWGALLGA 420
W AL+
Sbjct: 416 TTVSWTALISG 426
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/645 (33%), Positives = 340/645 (52%), Gaps = 46/645 (7%)
Query: 9 EWQVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLF 68
E +S+++ C + +HA I R + + + + L + L Y +F
Sbjct: 29 ESHFISLIHACKDTASLRHVHAQILRRGV-----LSSRVAAQLVSCSSLLKSPDYSLSIF 83
Query: 69 SQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT--- 125
NPF+ +ALIR T F ++R + M + P TF + + + L
Sbjct: 84 RNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRW 143
Query: 126 LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDE----------------- 168
LG LHA L D FV +++ MY K+G L A +VF+E
Sbjct: 144 LGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLI 203
Query: 169 ------------------MPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTA 210
MP+R+ SW+ LI Y +G++N A++LF+ + K+ V+WT
Sbjct: 204 NGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTT 263
Query: 211 MVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSG 270
++ G++Q + A+ + + E G++ +E T+A +SAC++ GA + +G
Sbjct: 264 LINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNG 323
Query: 271 FGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKL 330
R + G+ALVDMY+KCG ++ A VF M ++ ++++MI G+A+HGR AI+
Sbjct: 324 IKLDRAI--GTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQC 381
Query: 331 FYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLG 390
F +M+ + KP+ V F+ VL AC ++ VD G F +M Y + P+ HY + DLLG
Sbjct: 382 FRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLG 441
Query: 391 RAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLL 450
RAG L +A +LVE MP+ P+ W AL A H AE VS++L EL+P G+Y+
Sbjct: 442 RAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIF 501
Query: 451 LSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKK 510
L T+AS G DV + R ++ + +++ G+S++E +G +++F AGD H EI
Sbjct: 502 LDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIE-LDGQLNKFSAGDYSHKLTQEIGL 560
Query: 511 ALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFLLMAHSEKLALAFGLLNTDAGSTIKIMK 570
LD+++ GY P +DI ++EK + HSEKLAL G L T G+TI+I+K
Sbjct: 561 KLDEIISLAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIK 620
Query: 571 NLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFLNGACSCGDFW 615
NLRIC DCH +M SK++ R I++RD +FHHF +G CSCGD+W
Sbjct: 621 NLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/540 (36%), Positives = 307/540 (56%), Gaps = 37/540 (6%)
Query: 79 YSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL---GTQLHAHAL 135
++A+I+ G EA+ + M+ Q + + F ++ A L G Q+HA +
Sbjct: 238 WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII 297
Query: 136 LLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARE 195
F I+V + +I MY K CL A+ VF
Sbjct: 298 RTNFQDHIYVGSALIDMYCKCKCLHYAKTVF----------------------------- 328
Query: 196 LFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGA 255
D + K+ V+WTAMV GY Q +EA++ F ++ +G++ D TL AISACA + +
Sbjct: 329 --DRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSS 386
Query: 256 SKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMI 315
++ A +SG V V ++LV +Y KCG+++++ +F M R+A ++++M+
Sbjct: 387 LEEGSQFHGKAITSGL--IHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMV 444
Query: 316 VGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGV 375
+A GRA I+LF +M++ +KP+ VT GV+ AC+ AGLV++GQ F M YG+
Sbjct: 445 SAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGI 504
Query: 376 VPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSR 435
VPS HY+CM DL R+G LE+A++ + MP P+ W LL A GN ++ + +
Sbjct: 505 VPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAE 564
Query: 436 HLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEF 495
L EL+P++ Y LLS+ YAS G+WD V+++R+ MR+KN+KK PG SW++ + G +H F
Sbjct: 565 SLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWK-GKLHSF 623
Query: 496 LAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFLLMAHSEKLALAF 555
A D P +++I L++L ++ GY P+ S V +D+ + K +L HSE+LA+AF
Sbjct: 624 SADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAF 683
Query: 556 GLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFLNGACSCGDFW 615
GL+ +G I++ KNLR+C DCH S VTGR+I+VRD +RFH F +G CSCGDFW
Sbjct: 684 GLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 208/437 (47%), Gaps = 52/437 (11%)
Query: 23 RRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPF----- 77
R K +H +I R + +++ N++ + + +Y R +F ++P PN F
Sbjct: 23 RYVKMIHGNIIRALPYPETFLYNNIVH----AYALMKSSTYARRVFDRIPQPNLFSWNNL 78
Query: 78 --------------------------LYSALIRAYTLRGPFTEALRLYTSMR---NQRIT 108
++ LI Y+L G A++ Y +M + +T
Sbjct: 79 LLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLT 138
Query: 109 PISF-TFSALFSAVTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFD 167
++ T L S+ +++LG Q+H + LGF S + V + ++ MY GC+ A+KVF
Sbjct: 139 RVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFY 198
Query: 168 EMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEF 227
+ R+ V + L+ G + A +LF ++ KD V+W AM+ G AQN + KEA+E
Sbjct: 199 GLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIEC 257
Query: 228 FRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMY 287
FR ++ G++ D+ + AC LGA + + + F ++ VGSAL+DMY
Sbjct: 258 FREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNF--QDHIYVGSALIDMY 315
Query: 288 SKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFV 347
KC + A VF MK++N ++++M+VG+ GRA A+K+F +M + I P+H T
Sbjct: 316 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLG 375
Query: 348 GVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMAD----LLGRAGHLEKALQLVE 403
+ AC + +++G + HY +++ L G+ G ++ + +L
Sbjct: 376 QAISACANVSSLEEGSQFHGK-----AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFN 430
Query: 404 TMPVEPNGAVWGALLGA 420
M V + W A++ A
Sbjct: 431 EMNVR-DAVSWTAMVSA 446
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/608 (33%), Positives = 320/608 (52%), Gaps = 44/608 (7%)
Query: 14 SILNTCT---TLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
SIL TC L +Q+H+ I + N ++Y+ + L+ + L + +
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLI----DMYAKLGKLDTAWDILIR 550
Query: 71 VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL---G 127
+ ++ +I YT +AL + M ++ I + SA L G
Sbjct: 551 FAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 610
Query: 128 TQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARN 187
Q+HA A + GF+SD+ N L+T Y+R
Sbjct: 611 QQIHAQACVSGFSSDLPFQNA-------------------------------LVTLYSRC 639
Query: 188 GDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAI 247
G + + F++ + D +AW A+V+G+ Q+ +EAL F + G++ + T A+
Sbjct: 640 GKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAV 699
Query: 248 SACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERN 307
A ++ K V + +G+ V +AL+ MY+KCG++ +A F + +N
Sbjct: 700 KAASETANMKQGKQVHAVITKTGYDSETEVC--NALISMYAKCGSISDAEKQFLEVSTKN 757
Query: 308 AFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFS 367
+++++I ++ HG A+ F +M+ + ++PNHVT VGVL AC+H GLVD+G F
Sbjct: 758 EVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFE 817
Query: 368 NMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNP 427
+M YG+ P +HY C+ D+L RAG L +A + ++ MP++P+ VW LL A VH N
Sbjct: 818 SMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNM 877
Query: 428 DVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVES 487
++ E + HL ELEP + Y+LLSN YA + +WD R+ M++K +KK PG SW+E
Sbjct: 878 EIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEV 937
Query: 488 RNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFLLMAH 547
+N IH F GD HP +EI + DL +R IGY+ + S+ ++ ++K ++ H
Sbjct: 938 KNS-IHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIH 996
Query: 548 SEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFLNG 607
SEKLA++FGLL+ A I +MKNLR+C DCH + SKV+ R+I+VRD RFHHF G
Sbjct: 997 SEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGG 1056
Query: 608 ACSCGDFW 615
ACSC D+W
Sbjct: 1057 ACSCKDYW 1064
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 184/421 (43%), Gaps = 47/421 (11%)
Query: 12 VVSILNTCT---TLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLF 68
+ S++ C+ TL R +QLHA+ + ++ I LL Y F
Sbjct: 392 LASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY----F 447
Query: 69 SQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTNLT 125
+ N L++ ++ AY L + R++ M+ + I P +T+ ++ + +L
Sbjct: 448 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 126 LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYA 185
LG Q+H+ + F + +V + +I MY A
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMY-------------------------------A 536
Query: 186 RNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
+ G +++A ++ KD V+WT M+ GY Q +AL FR + + G+ +DEV L
Sbjct: 537 KLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTN 596
Query: 246 AISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE 305
A+SACA L A K+ + A SGF + ++ +ALV +YS+CG +EE+Y F +
Sbjct: 597 AVSACAGLQALKEGQQIHAQACVSGF--SSDLPFQNALVTLYSRCGKIEESYLAFEQTEA 654
Query: 306 RNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYL 365
+ +++++ GF G A+++F M I N+ TF + A + + QG+ +
Sbjct: 655 GDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQV 714
Query: 366 FSNMEGCYGVVPSADHYACMADLLGRAGHLEKA-LQLVETMPVEPNGAVWGALLGASHVH 424
+ + G + + + + G + A Q +E N W A++ A H
Sbjct: 715 HAVITKT-GYDSETEVCNALISMYAKCGSISDAEKQFLEVST--KNEVSWNAIINAYSKH 771
Query: 425 G 425
G
Sbjct: 772 G 772
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 170/382 (44%), Gaps = 45/382 (11%)
Query: 26 KQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIRA 85
+Q+HA I L S+ ++ N L L + + + R +F + + + A+I
Sbjct: 207 EQIHARILYQGLRDST-VVCNPLIDLYSRNGFVDL---ARRVFDGLRLKDHSSWVAMISG 262
Query: 86 YTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTNLTLGTQLHAHALLLGFASD 142
+ EA+RL+ M I P + FS++ SA + +L +G QLH L LGF+SD
Sbjct: 263 LSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD 322
Query: 143 IFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDV 202
+V N ++ +Y G L SA +F M QRD V++ LI ++
Sbjct: 323 TYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQ---------------- 366
Query: 203 KDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWV 262
GY + AM E F+ + G+E D TLA + AC+ G +
Sbjct: 367 ----------CGYGEKAM-----ELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL 411
Query: 263 RCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHG 322
GF A N + AL+++Y+KC ++E A + F + N ++ M+V + +
Sbjct: 412 HAYTTKLGF--ASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 469
Query: 323 RARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHY 382
R + ++F +M EI PN T+ +L C G ++ G+ + S + + Y
Sbjct: 470 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI---IKTNFQLNAY 526
Query: 383 AC--MADLLGRAGHLEKALQLV 402
C + D+ + G L+ A ++
Sbjct: 527 VCSVLIDMYAKLGKLDTAWDIL 548
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 179/420 (42%), Gaps = 45/420 (10%)
Query: 6 RALEWQVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPR 65
+ L+W + L T +L ++LH+ I + L + + L F Y
Sbjct: 85 QTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLF-----DFYLFKGDLYGA 139
Query: 66 L-LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL 124
+F ++P F ++ +I+ R E L+ M ++ +TP TFS + A
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 199
Query: 125 TLG----TQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTEL 180
++ Q+HA L G V N +I +Y ++G +D AR+VFD + +D SW
Sbjct: 200 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW--- 256
Query: 181 ITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
AM++G ++N EA+ F + G+
Sbjct: 257 ----------------------------VAMISGLSKNECEAEAIRLFCDMYVLGIMPTP 288
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
+ +SAC ++ + + + + + GF + + V +ALV +Y GN+ A ++F
Sbjct: 289 YAFSSVLSACKKIESLEIGEQLHGLVLKLGF--SSDTYVCNALVSLYFHLGNLISAEHIF 346
Query: 301 RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVD 360
M +R+A TY+++I G + G A++LF M ++P+ T ++VAC+ G +
Sbjct: 347 SNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLF 406
Query: 361 QGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGA 420
+GQ L + G + + +L + +E AL VE N +W +L A
Sbjct: 407 RGQQLHAYTTK-LGFASNNKIEGALLNLYAKCADIETALDYFLETEVE-NVVLWNVMLVA 464
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 176/431 (40%), Gaps = 75/431 (17%)
Query: 47 LLRHLTTTFPHLPIHSYPRLLFSQVPSPN-------PFLYSALIRAYTLRGPFTEALRLY 99
LR ++++F + IH PR L ++ P F A I Y + R+
Sbjct: 19 FLRSVSSSF--IFIHGVPRKLKTRTVFPTLCGTRRASF---AAISVYISEDESFQEKRI- 72
Query: 100 TSMRNQRITPISFTFSALFSAV--TNLTL--GTQLHAHALLLGFASDIFVNNTMIKMYVK 155
S+ N+ I P T L TN +L G +LH+ L LG S+
Sbjct: 73 DSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSN------------- 119
Query: 156 SGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGY 215
GCL + K+FD Y GD+ A ++FDE+ + W M+
Sbjct: 120 -GCL--SEKLFD---------------FYLFKGDLYGAFKVFDEMPERTIFTWNKMIKEL 161
Query: 216 AQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPAR 275
A + E F + + +E T +G + AC G S D V I + R
Sbjct: 162 ASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR--GGSVAFDVVEQIHARILYQGLR 219
Query: 276 N-VLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEM 334
+ +V + L+D+YS+ G V+ A VF G++ ++ ++ +MI G + + AI+LF +M
Sbjct: 220 DSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDM 279
Query: 335 LETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVP----SADHYAC--MADL 388
I P F VL AC ++ G+ L +G+V S+D Y C + L
Sbjct: 280 YVLGIMPTPYAFSSVLSACKKIESLEIGEQL-------HGLVLKLGFSSDTYVCNALVSL 332
Query: 389 LGRAGHLEKALQLVETMPVEPNGAVWGALL-GASHVHGNPDVAEIVSR-HLFELEPNNIG 446
G+L A + M + + + L+ G S E+ R HL LEP+
Sbjct: 333 YFHLGNLISAEHIFSNMS-QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD--- 388
Query: 447 NYLLLSNTYAS 457
SNT AS
Sbjct: 389 -----SNTLAS 394
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 224/622 (36%), Positives = 340/622 (54%), Gaps = 58/622 (9%)
Query: 10 WQVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFS 69
+ ++S L++C +L+ AK L I+ +L + ++ L T + + R +FS
Sbjct: 416 FTLISSLSSCASLKWAK-LGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFS 474
Query: 70 QVPSPNPFLYSALIRAYTL-RGPFTEALRLYTSMR--NQRITPISFTFSALFSAVTNL-T 125
+P + ++++I A EA+ + + + Q++ I+F+ + +
Sbjct: 475 SMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGE 534
Query: 126 LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYA 185
LG Q+H AL A + N LI Y
Sbjct: 535 LGKQIHGLALKNNIADEATTENA-------------------------------LIACYG 563
Query: 186 RNGDMNSARELFDEL-DVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLA 244
+ G+M+ ++F + + +D V W +M++GY N + +AL+ + + G D A
Sbjct: 564 KCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYA 623
Query: 245 GAISACAQL-----GASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNV 299
+SA A + G A VR ES +V+VGSALVDMYSKCG ++ A
Sbjct: 624 TVLSAFASVATLERGMEVHACSVRACLES-------DVVVGSALVDMYSKCGRLDYALRF 676
Query: 300 FRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEM-LETEIKPNHVTFVGVLVACTHAGL 358
F M RN+++++SMI G+A HG+ A+KLF M L+ + P+HVTFVGVL AC+HAGL
Sbjct: 677 FNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGL 736
Query: 359 VDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALL 418
+++G F +M YG+ P +H++CMAD+LGRAG L+K +E MP++PN +W +L
Sbjct: 737 LEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVL 796
Query: 419 GASHVHGNPDVAEI---VSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKN 475
GA N AE+ + LF+LEP N NY+LL N YA+ GRW+D+ + RK M+D +
Sbjct: 797 GAC-CRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDAD 855
Query: 476 LKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDI 535
+KK GYSWV ++GV H F+AGD HP+ + I K L +L +++ GY+P YD+
Sbjct: 856 VKKEAGYSWVTMKDGV-HMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDL 914
Query: 536 GDKEKRFLLMAHSEKLALAFGLLNTDAGST--IKIMKNLRICEDCHIVMCGASKVTGRKI 593
+ K +L HSEKLA+AF +L ST I+IMKNLR+C DCH SK+ GR+I
Sbjct: 915 EQENKEEILSYHSEKLAVAF-VLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQI 973
Query: 594 VVRDNMRFHHFLNGACSCGDFW 615
++RD+ RFHHF +GACSC DFW
Sbjct: 974 ILRDSNRFHHFQDGACSCSDFW 995
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 187/418 (44%), Gaps = 51/418 (12%)
Query: 22 LRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSA 81
L++ +++H H+ L I N L + + R +F + + +++
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGN---GLVNMYAKCGSIADARRVFYFMTDKDSVSWNS 385
Query: 82 LIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT---LGTQLHAHALLLG 138
+I G F EA+ Y SMR I P SFT + S+ +L LG Q+H +L LG
Sbjct: 386 MITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLG 445
Query: 139 FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFD 198
++ V+N ++ +Y ++G L+ RK+F MP+ D VSW +I A AR
Sbjct: 446 IDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALAR------------ 493
Query: 199 ELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKD 258
++ ++P+ + F R AG + + +T + +SA + L +
Sbjct: 494 -----------------SERSLPEAVVCFLNAQR-AGQKLNRITFSSVLSAVSSLSFGEL 535
Query: 259 ADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE-RNAFTYSSMIVG 317
+ +A + A +AL+ Y KCG ++ +F M E R+ T++SMI G
Sbjct: 536 GKQIHGLALKNNI--ADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Query: 318 FAIHGRARA-AIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFS-NMEGCYG- 374
+ IH A A+ L + ML+T + + + VL A +++G + + ++ C
Sbjct: 594 Y-IHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLES 652
Query: 375 --VVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVA 430
VV SA + D+ + G L+ AL+ TMPV N W +++ HG + A
Sbjct: 653 DVVVGSA-----LVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISGYARHGQGEEA 704
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/431 (19%), Positives = 185/431 (42%), Gaps = 61/431 (14%)
Query: 9 EWQVVSILNTCTTLRR-----AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSY 63
++ VS+L C + +Q+H +++ + + +++N+L ++ + + Y
Sbjct: 102 QYAFVSVLRACQEIGSVGILFGRQIHGLMFKLS-YAVDAVVSNVL--ISMYWKCIGSVGY 158
Query: 64 PRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN 123
F + N ++++I Y+ G A R+++SM+ P +TF +L + +
Sbjct: 159 ALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218
Query: 124 LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
LT D+ + ++ KSG L D+ + L++A
Sbjct: 219 LT--------------EPDVRLLEQIMCTIQKSGLLT------------DLFVGSGLVSA 252
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
+A++G ++ AR++F++++ ++ V ++ G + +EA + F M+ + +
Sbjct: 253 FAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLF-------MDMNSMID 305
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVL--------------VGSALVDMYSK 289
S L + + +AE G R V +G+ LV+MY+K
Sbjct: 306 VSPESYVILLSSFPEYS----LAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAK 361
Query: 290 CGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGV 349
CG++ +A VF M ++++ +++SMI G +G A++ + M +I P T +
Sbjct: 362 CGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISS 421
Query: 350 LVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEP 409
L +C GQ + G+ + + L G+L + ++ +MP E
Sbjct: 422 LSSCASLKWAKLGQQIHGESLK-LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EH 479
Query: 410 NGAVWGALLGA 420
+ W +++GA
Sbjct: 480 DQVSWNSIIGA 490
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 135/331 (40%), Gaps = 46/331 (13%)
Query: 13 VSILNTCTTLRRAKQL-HAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
+S + +C R A + H+ +Y++ L + Y+ NL+ T + R +F ++
Sbjct: 7 LSFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVS----ARKVFDEM 62
Query: 72 PSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV-----TNLTL 126
P N ++ ++ Y+ G EAL M + I + F ++ A +
Sbjct: 63 PLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILF 122
Query: 127 GTQLHAHALLLGFASDIFVNNTMIKMYVKS-GCLDSARKVFDEMPQRDVVSWTELITAYA 185
G Q+H L +A D V+N +I MY K G + A F ++ ++ VSW +I+ Y+
Sbjct: 123 GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYS 182
Query: 186 RNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
+ GD SA +F + G E T
Sbjct: 183 QAGDQRSAFRIFSSMQYD-------------------------------GSRPTEYTFGS 211
Query: 246 AISACAQLGAS--KDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
++ L + + + C + SG ++ VGS LV ++K G++ A VF M
Sbjct: 212 LVTTACSLTEPDVRLLEQIMCTIQKSGL--LTDLFVGSGLVSAFAKSGSLSYARKVFNQM 269
Query: 304 KERNAFTYSSMIVGFAIHGRARAAIKLFYEM 334
+ RNA T + ++VG A KLF +M
Sbjct: 270 ETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 103/194 (53%), Gaps = 4/194 (2%)
Query: 164 KVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKE 223
+++ +DV LI AY GD SAR++FDE+ +++ V+W +V+GY++N KE
Sbjct: 26 RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE 85
Query: 224 ALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSAL 283
AL F R + + G+ +++ + AC ++G+ + A + +V + L
Sbjct: 86 ALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVL 145
Query: 284 VDMYSKC-GNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPN 342
+ MY KC G+V A F ++ +N+ +++S+I ++ G R+A ++F M +P
Sbjct: 146 ISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPT 205
Query: 343 HVTFVGVLV--ACT 354
TF G LV AC+
Sbjct: 206 EYTF-GSLVTTACS 218
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/504 (37%), Positives = 301/504 (59%), Gaps = 8/504 (1%)
Query: 12 VVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
++S+L +C + +HA I R Q ++++ L+R +T L Y +FS V
Sbjct: 32 LISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCST----LDSVDYAYDVFSYV 87
Query: 72 PSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLH 131
+PN +LY+A+I + G + + LY M + + P ++ +++ A +L + ++H
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKA-CDLKVCREIH 146
Query: 132 AHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMN 191
A L LGF S V M+++Y KSG L +A+K+FDEMP RD V+ T +I Y+ G +
Sbjct: 147 AQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIK 206
Query: 192 SARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACA 251
A ELF ++ +KD V WTAM+ G +N +ALE FR ++ + +E T +SAC+
Sbjct: 207 EALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACS 266
Query: 252 QLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTY 311
LGA + WV E+ + VG+AL++MYS+CG++ EA VFR M++++ +Y
Sbjct: 267 DLGALELGRWVHSFVENQRMELSN--FVGNALINMYSRCGDINEARRVFRVMRDKDVISY 324
Query: 312 SSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEG 371
++MI G A+HG + AI F +M+ +PN VT V +L AC+H GL+D G +F++M+
Sbjct: 325 NTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKR 384
Query: 372 CYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAE 431
+ V P +HY C+ DLLGR G LE+A + +E +P+EP+ + G LL A +HGN ++ E
Sbjct: 385 VFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGE 444
Query: 432 IVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGV 491
+++ LFE E + G Y+LLSN YAS+G+W + + +R+ MRD ++K PG S +E N
Sbjct: 445 KIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQ- 503
Query: 492 IHEFLAGDVKHPEINEIKKALDDL 515
IHEFL GD+ HP I + L +L
Sbjct: 504 IHEFLVGDIAHPHKEAIYQRLQEL 527
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/615 (35%), Positives = 342/615 (55%), Gaps = 46/615 (7%)
Query: 11 QVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
++S++ + T +Q+HA + R +L ++S + + L L + I+ Y +FSQ
Sbjct: 13 HLLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDIN-YSCRVFSQ 71
Query: 71 VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQR---ITPISFTFSALFSAVT--NLT 125
+P + +IRA++L E RL+ S+R P+S +F AL + +L
Sbjct: 72 RLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSF-ALKCCIKSGDLL 130
Query: 126 LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYA 185
G Q+H GF SD + T++ +Y S C +S
Sbjct: 131 GGLQIHGKIFSDGFLSDSLLMTTLMDLY--STCENST----------------------- 165
Query: 186 RNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLR---EAGMETDEVT 242
A ++FDE+ +D V+W + + Y +N ++ L F ++ + ++ D VT
Sbjct: 166 ------DACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVT 219
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
A+ ACA LGA V + +G A N+ + LV MYS+CG++++AY VF G
Sbjct: 220 CLLALQACANLGALDFGKQVHDFIDENGLSGALNL--SNTLVSMYSRCGSMDKAYQVFYG 277
Query: 303 MKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQG 362
M+ERN +++++I G A++G + AI+ F EML+ I P T G+L AC+H+GLV +G
Sbjct: 278 MRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEG 337
Query: 363 QYLFSNME-GCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGAS 421
F M G + + P+ HY C+ DLLGRA L+KA L+++M ++P+ +W LLGA
Sbjct: 338 MMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGAC 397
Query: 422 HVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPG 481
VHG+ ++ E V HL EL+ G+Y+LL NTY++ G+W+ V+ +R LM++K + PG
Sbjct: 398 RVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPG 457
Query: 482 YSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDI-GDKEK 540
S +E + G +HEF+ DV HP EI K L ++ ++LK GY+ ++S +++ ++EK
Sbjct: 458 CSAIELQ-GTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLESEEEK 516
Query: 541 RFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMR 600
+ L HSEKLA+AFG+L T G+TI++ KNLR C DCH S V R ++VRD R
Sbjct: 517 GYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSR 576
Query: 601 FHHFLNGACSCGDFW 615
FHHF G+CSC DFW
Sbjct: 577 FHHFKGGSCSCNDFW 591
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/561 (37%), Positives = 305/561 (54%), Gaps = 49/561 (8%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN- 123
R LF ++P N ++A I G EA+ + R P S TF A +A ++
Sbjct: 163 RKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDW 222
Query: 124 --LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
L LG QLH L GF +D+ V N +I Y K
Sbjct: 223 LHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCK------------------------ 258
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
+ S+ +F E+ K+ V+W ++V Y QN ++A + R+ +ET +
Sbjct: 259 -------QIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDF 311
Query: 242 TLAGAISACA-----QLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEA 296
++ +SACA +LG S A V+ E R + VGSALVDMY KCG +E++
Sbjct: 312 MISSVLSACAGMAGLELGRSIHAHAVKACVE-------RTIFVGSALVDMYGKCGCIEDS 364
Query: 297 YNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEI--KPNHVTFVGVLVACT 354
F M E+N T +S+I G+A G+ A+ LF EM PN++TFV +L AC+
Sbjct: 365 EQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACS 424
Query: 355 HAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVW 414
AG V+ G +F +M YG+ P A+HY+C+ D+LGRAG +E+A + ++ MP++P +VW
Sbjct: 425 RAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVW 484
Query: 415 GALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDK 474
GAL A +HG P + + + +LF+L+P + GN++LLSNT+A+AGRW + + VR+ ++
Sbjct: 485 GALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGV 544
Query: 475 NLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYD 534
+KK GYSW+ +N V H F A D H EI+ L L ++A GY P+L YD
Sbjct: 545 GIKKGAGYSWITVKNQV-HAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYD 603
Query: 535 IGDKEKRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIV 594
+ ++EK + HSEKLALAFGLL+ I+I KNLRIC DCH S R+I+
Sbjct: 604 LEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREII 663
Query: 595 VRDNMRFHHFLNGACSCGDFW 615
VRDN RFH F +G CSC D+W
Sbjct: 664 VRDNNRFHRFKDGICSCKDYW 684
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 193/458 (42%), Gaps = 65/458 (14%)
Query: 18 TCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPF 77
+ +++R + +HA I + + N L ++ + H RL+ P+ N
Sbjct: 18 SASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDH---PESARLVLRLTPARNVV 74
Query: 78 LYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL---GTQLHAHA 134
+++LI G F+ AL + MR + + P FTF F AV +L L G Q+HA A
Sbjct: 75 SWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALA 134
Query: 135 LLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSAR 194
+ G D+FV + MY K+ D ARK+FDE+P+R++ +W I+ +G
Sbjct: 135 VKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG------ 188
Query: 195 ELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLG 254
P+EA+E F R + +T ++AC
Sbjct: 189 -------------------------RPREAIEAFIEFRRIDGHPNSITFCAFLNAC---- 219
Query: 255 ASKDADWVRC--------IAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER 306
+DW+ + SGF +V V + L+D Y KC + + +F M +
Sbjct: 220 ----SDWLHLNLGMQLHGLVLRSGFDT--DVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK 273
Query: 307 NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLF 366
NA ++ S++ + + A L+ + ++ + VL AC ++ G+ +
Sbjct: 274 NAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIH 333
Query: 367 SN-MEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHG 425
++ ++ C V + + + D+ G+ G +E + Q + MP E N +L+G G
Sbjct: 334 AHAVKAC--VERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGGYAHQG 390
Query: 426 NPDVAEIVSRHLFELEPNNIG---NYLLLSNTYASAGR 460
D+A + E+ P G NY+ + ++ R
Sbjct: 391 QVDMALAL---FEEMAPRGCGPTPNYMTFVSLLSACSR 425
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 138/312 (44%), Gaps = 39/312 (12%)
Query: 134 ALLLGFASDIFVNNTMIKMYVKSGCLDSAR--KVFDEMPQRDVVSWTELITAYARNGDMN 191
+LL A + + N + ++ G + AR K D P + ++ LI Y++
Sbjct: 2 SLLSADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANY--LINMYSKLDHPE 59
Query: 192 SARELFDELDVKDKVAWTAMVTGYAQNAMPKEAL-EFFRCLREAGMETDEVTLAGAISAC 250
SAR + ++ V+WT++++G AQN AL EFF RE G+ ++ T A A
Sbjct: 60 SARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE-GVVPNDFTFPCAFKAV 118
Query: 251 AQL-----GASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE 305
A L G A V+C G +V VG + DMY K ++A +F + E
Sbjct: 119 ASLRLPVTGKQIHALAVKC-------GRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPE 171
Query: 306 RNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACT-----HAGLVD 360
RN T+++ I GR R AI+ F E + PN +TF L AC+ + G+
Sbjct: 172 RNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQL 231
Query: 361 QGQYLFSNMEG----CYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGA 416
G L S + C G++ D G+ + ++ +++ T N W +
Sbjct: 232 HGLVLRSGFDTDVSVCNGLI----------DFYGKCKQI-RSSEIIFTEMGTKNAVSWCS 280
Query: 417 LLGASHVHGNPD 428
L+ A++V + D
Sbjct: 281 LV-AAYVQNHED 291
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/610 (32%), Positives = 330/610 (54%), Gaps = 44/610 (7%)
Query: 12 VVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
+++ + +C ++ + LH + + ++ +I L+ + L LF ++
Sbjct: 37 LIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLV----GCYLRLGHDVCAEKLFDEM 92
Query: 72 PSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRI--TPISFTFSALFSAVT---NLTL 126
P + +++LI Y+ RG + + + M + P TF ++ SA +
Sbjct: 93 PERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEE 152
Query: 127 GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYAR 186
G +H + G ++ V N I +W Y +
Sbjct: 153 GRCIHGLVMKFGVLEEVKVVNAFI-------------------------NW------YGK 181
Query: 187 NGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGA 246
GD+ S+ +LF++L +K+ V+W M+ + QN + ++ L +F R G E D+ T
Sbjct: 182 TGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAV 241
Query: 247 ISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER 306
+ +C +G + A + + GF + N + +AL+D+YSK G +E++ VF +
Sbjct: 242 LRSCEDMGVVRLAQGIHGLIMFGGF--SGNKCITTALLDLYSKLGRLEDSSTVFHEITSP 299
Query: 307 NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLF 366
++ +++M+ +A HG R AIK F M+ I P+HVTF +L AC+H+GLV++G++ F
Sbjct: 300 DSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYF 359
Query: 367 SNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGN 426
M Y + P DHY+CM DLLGR+G L+ A L++ MP+EP+ VWGALLGA V+ +
Sbjct: 360 ETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKD 419
Query: 427 PDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVE 486
+ + LFELEP + NY++LSN Y+++G W D SR+R LM+ K L + G S++E
Sbjct: 420 TQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIE 479
Query: 487 SRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKA-IGYLPNLSSVPYDIGDKEKRFLLM 545
N IH+F+ GD HPE +I+K L ++ +++K+ +GY V +D+G+ K ++
Sbjct: 480 HGNK-IHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMIN 538
Query: 546 AHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFL 605
HSEK+A+AFGLL I I KNLRIC DCH S + R+I++RD+ RFHHFL
Sbjct: 539 QHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFL 598
Query: 606 NGACSCGDFW 615
+G+CSC D+W
Sbjct: 599 DGSCSCSDYW 608
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/614 (33%), Positives = 338/614 (55%), Gaps = 46/614 (7%)
Query: 9 EWQVVSILNTCTTLRR----AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYP 64
++ + S+L ++L +KQ+H H + N S++ T L+ +
Sbjct: 416 QYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALI----DAYSRNRCMKEA 471
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL 124
+LF + + + ++A++ YT + L+L+ M Q FT + +F L
Sbjct: 472 EILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFL 530
Query: 125 ---TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
G Q+HA+A+ G+ D++V++ ++ MYVK G
Sbjct: 531 FAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCG------------------------ 566
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
DM++A+ FD + V D VAWT M++G +N + A F +R G+ DE
Sbjct: 567 -------DMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEF 619
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
T+A A + L A + + A + + VG++LVDMY+KCG++++AY +F+
Sbjct: 620 TIATLAKASSCLTALEQGRQIH--ANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFK 677
Query: 302 GMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
++ N +++M+VG A HG + ++LF +M IKP+ VTF+GVL AC+H+GLV +
Sbjct: 678 RIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSE 737
Query: 362 GQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGAS 421
+M G YG+ P +HY+C+AD LGRAG +++A L+E+M +E + +++ LL A
Sbjct: 738 AYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAAC 797
Query: 422 HVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPG 481
V G+ + + V+ L ELEP + Y+LLSN YA+A +WD++ R +M+ +KK+PG
Sbjct: 798 RVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPG 857
Query: 482 YSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKR 541
+SW+E +N IH F+ D + + I + + D++ +K GY+P D+ ++EK
Sbjct: 858 FSWIEVKNK-IHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKE 916
Query: 542 FLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRF 601
L HSEKLA+AFGLL+T + I+++KNLR+C DCH M +KV R+IV+RD RF
Sbjct: 917 RALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRF 976
Query: 602 HHFLNGACSCGDFW 615
H F +G CSCGD+W
Sbjct: 977 HRFKDGICSCGDYW 990
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 158/383 (41%), Gaps = 52/383 (13%)
Query: 18 TCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPF 77
T + L K HA I + ++I NL+ + + +Y R +F ++P +
Sbjct: 51 TSSDLMLGKCTHARILTFEENPERFLINNLI----SMYSKCGSLTYARRVFDKMPDRDLV 106
Query: 78 LYSALIRAYTLRGP-----FTEALRLYTSMRNQRITPISFTFSALFSAVTN---LTLGTQ 129
+++++ AY +A L+ +R + T S + + +
Sbjct: 107 SWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASES 166
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNG- 188
H +A +G D FV ++ +Y+K G + + +F+EMP RDVV W ++ AY G
Sbjct: 167 FHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGF 226
Query: 189 -----DMNSA-----------------RELFDELD---------------VKDKVAWTAM 211
D++SA R D+ D V + +
Sbjct: 227 KEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKG 286
Query: 212 VTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGF 271
++ Y + L+ F + E+ +E D+VT ++ ++ + V C+A G
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346
Query: 272 GPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLF 331
+ V ++L++MY K A VF M ER+ +++S+I G A +G A+ LF
Sbjct: 347 DLM--LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF 404
Query: 332 YEMLETEIKPNHVTFVGVLVACT 354
++L +KP+ T VL A +
Sbjct: 405 MQLLRCGLKPDQYTMTSVLKAAS 427
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 122/284 (42%), Gaps = 55/284 (19%)
Query: 83 IRAYTLRGPFTEALRLYTSMRNQRITPISFT---------------FSALFSAVT--NLT 125
+R+ + PF+ +TS+ Q + P+ FT F L +A+T +L
Sbjct: 1 MRSTSKAIPFS----FHTSLIVQCLRPLRFTSAASPSSSSSSSSQWFGFLRNAITSSDLM 56
Query: 126 LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYA 185
LG HA L + F+ N +I MY K G L AR+VFD+MP RD+VSW ++ AYA
Sbjct: 57 LGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYA 116
Query: 186 RNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
++ + V + + ++A FR LR+ + T +TL+
Sbjct: 117 QSSEC-----------VVENI---------------QQAFLLFRILRQDVVYTSRMTLSP 150
Query: 246 AISACAQLG---ASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
+ C G AS+ C G + V ALV++Y K G V+E +F
Sbjct: 151 MLKLCLHSGYVWASESFHGYAC-----KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEE 205
Query: 303 MKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTF 346
M R+ ++ M+ + G AI L + + PN +T
Sbjct: 206 MPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 146/357 (40%), Gaps = 56/357 (15%)
Query: 86 YTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTNLTLGTQLHAHALLLGFASD 142
Y G ++ L+ + M + TF + + V +L LG Q+H AL LG
Sbjct: 290 YLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLM 349
Query: 143 IFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDV 202
+ V+N++I MY K RK AR +FD +
Sbjct: 350 LTVSNSLINMYCK------LRK-------------------------FGFARTVFDNMSE 378
Query: 203 KDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQL--GASKDAD 260
+D ++W +++ G AQN + EA+ F L G++ D+ T+ + A + L G S
Sbjct: 379 RDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSK- 437
Query: 261 WVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAF---TYSSMIVG 317
+ + + V +AL+D YS+ ++EA +F ER+ F +++M+ G
Sbjct: 438 --QVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF----ERHNFDLVAWNAMMAG 491
Query: 318 FAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVP 377
+ +KLF M + + + T V C ++QG+ + + Y +
Sbjct: 492 YTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHA-----YAIKS 546
Query: 378 SADH----YACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVA 430
D + + D+ + G + A +++PV P+ W ++ +G + A
Sbjct: 547 GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCIENGEEERA 602
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/516 (35%), Positives = 299/516 (57%), Gaps = 10/516 (1%)
Query: 25 AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIR 84
K+LH H+ + L + Y+ L++ + + R +F + + F ++ +I
Sbjct: 154 GKKLHCHVVKFGLGSNLYVQNALVK----MYSLCGLMDMARGVFDRRCKEDVFSWNLMIS 209
Query: 85 AYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTNLTLGTQLHAHALLLGFAS 141
Y + E++ L M ++P S T + SA V + L ++H +
Sbjct: 210 GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 269
Query: 142 DIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELD 201
+ + N ++ Y G +D A ++F M RDV+SWT ++ Y G++ AR FD++
Sbjct: 270 SLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP 329
Query: 202 VKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADW 261
V+D+++WT M+ GY + E+LE FR ++ AGM DE T+ ++ACA LG+ + +W
Sbjct: 330 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEW 389
Query: 262 VRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIH 321
++ + + +V+VG+AL+DMY KCG E+A VF M +R+ FT+++M+VG A +
Sbjct: 390 IKTYIDKNKI--KNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANN 447
Query: 322 GRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADH 381
G+ + AIK+F++M + I+P+ +T++GVL AC H+G+VDQ + F+ M + + PS H
Sbjct: 448 GQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVH 507
Query: 382 YACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELE 441
Y CM D+LGRAG +++A +++ MP+ PN VWGALLGAS +H + +AE+ ++ + ELE
Sbjct: 508 YGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELE 567
Query: 442 PNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVK 501
P+N Y LL N YA RW D+ VR+ + D +KK PG+S +E NG HEF+AGD
Sbjct: 568 PDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEV-NGFAHEFVAGDKS 626
Query: 502 HPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGD 537
H + EI L++L + YLP+ S + ++ GD
Sbjct: 627 HLQSEEIYMKLEELAQESTFAAYLPDTSELLFEAGD 662
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/482 (25%), Positives = 218/482 (45%), Gaps = 41/482 (8%)
Query: 11 QVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFP-HLPIHSYPRLLFS 69
+ +SIL C T + KQLH+ + + L + H+ SY LF
Sbjct: 36 RFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHV---SYAYKLFV 92
Query: 70 QVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN----LT 125
++P P+ +++ +I+ ++ E +RLY +M + +TP S TF L + + L
Sbjct: 93 KIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALA 152
Query: 126 LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYA 185
G +LH H + G S+++V N ++KMY G +D AR VFD + DV SW +I+ Y
Sbjct: 153 CGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYN 212
Query: 186 RNGDMNSARELFDELDVKDKVAWTAMV--------TGYAQNAMPKEALEFF-RCLREAGM 236
R + + EL E++ ++ V+ T++ + + K E+ C E +
Sbjct: 213 RMKEYEESIELLVEME-RNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSL 271
Query: 237 ETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEA 296
E L A +AC ++ + VR AR+V+ +++V Y + GN++ A
Sbjct: 272 RL-ENALVNAYAACGEMDIA-----VRIFRSMK----ARDVISWTSIVKGYVERGNLKLA 321
Query: 297 YNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHA 356
F M R+ +++ MI G+ G ++++F EM + P+ T V VL AC H
Sbjct: 322 RTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHL 381
Query: 357 GLVDQGQ----YLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGA 412
G ++ G+ Y+ N VV +A + D+ + G EKA ++ M + +
Sbjct: 382 GSLEIGEWIKTYIDKNKIKNDVVVGNA-----LIDMYFKCGCSEKAQKVFHDMD-QRDKF 435
Query: 413 VWGALLG--ASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKL 470
W A++ A++ G + ++P++I YL + + +G D +
Sbjct: 436 TWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDI-TYLGVLSACNHSGMVDQARKFFAK 494
Query: 471 MR 472
MR
Sbjct: 495 MR 496
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/615 (33%), Positives = 336/615 (54%), Gaps = 25/615 (4%)
Query: 12 VVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
++ + + L K++H HI I LLR + R +F ++
Sbjct: 91 LIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVD----ARKVFDEM 146
Query: 72 PSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLH 131
P+ + ++ ++ Y G EA +L+ M + S++++A+ VT Q
Sbjct: 147 PNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKD----SYSWTAM---VTGYVKKDQPE 199
Query: 132 AHALLLGFAS-------DIFVNNTMIKMYVKSGCLDSARKVFDEMPQ----RDVVSWTEL 180
+L +IF + + C+ +++ + + D V W+ L
Sbjct: 200 EALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSL 259
Query: 181 ITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
+ Y + G ++ AR +FD++ KD V+WT+M+ Y +++ +E F L + +E
Sbjct: 260 MDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNE 319
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
T AG ++ACA L + V GF P S+LVDMY+KCGN+E A +V
Sbjct: 320 YTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYS--FASSSLVDMYTKCGNIESAKHVV 377
Query: 301 RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVD 360
G + + +++S+I G A +G+ A+K F +L++ KP+HVTFV VL ACTHAGLV+
Sbjct: 378 DGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVE 437
Query: 361 QGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGA 420
+G F ++ + + ++DHY C+ DLL R+G E+ ++ MP++P+ +W ++LG
Sbjct: 438 KGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGG 497
Query: 421 SHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNP 480
+GN D+AE ++ LF++EP N Y+ ++N YA+AG+W++ ++RK M++ + K P
Sbjct: 498 CSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRP 557
Query: 481 GYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEK 540
G SW E + H F+A D HP N+I + L +L +++K GY+P S V +D+ D++K
Sbjct: 558 GSSWTEIKRKR-HVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQK 616
Query: 541 RFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMR 600
L+ HSEKLA+AF +L+T+ G+ IK+ KNLR C DCH + S +T RKI VRD+ R
Sbjct: 617 EENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTR 676
Query: 601 FHHFLNGACSCGDFW 615
FH F NG CSCGD+W
Sbjct: 677 FHCFENGQCSCGDYW 691
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/613 (35%), Positives = 322/613 (52%), Gaps = 69/613 (11%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL 124
R +F +P N ++A+++ Y G EA L+ M + + F L
Sbjct: 99 RNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDD---- 154
Query: 125 TLGTQLHAHALL-LGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
G A L + D+ + MI + G +D AR +FDEM +R+VV+WT +IT
Sbjct: 155 --GRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITG 212
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLR----------- 232
Y +N ++ AR+LF+ + K +V+WT+M+ GY + ++A EFF +
Sbjct: 213 YRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMI 272
Query: 233 ----EAG-----------MET-DEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARN 276
E G ME D T G I A + G +A + + G P+
Sbjct: 273 VGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFP 332
Query: 277 VLV---------------------------------GSALVDMYSKCGNVEEAYNVFRGM 303
L+ S L+ MY KCG + +A VF
Sbjct: 333 SLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRF 392
Query: 304 KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQ 363
++ ++S+I G+A HG A+K+F+EM + PN VT + +L AC++AG +++G
Sbjct: 393 SSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGL 452
Query: 364 YLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHV 423
+F +ME + V P+ +HY+C D+LGRAG ++KA++L+E+M ++P+ VWGALLGA
Sbjct: 453 EIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKT 512
Query: 424 HGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYS 483
H D+AE+ ++ LFE EP+N G Y+LLS+ AS +W DV+ VRK MR N+ K PG S
Sbjct: 513 HSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCS 572
Query: 484 WVESRNGVIHEFLAGDVK-HPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRF 542
W+E V H F G +K HPE I L+ L+ GY P+ S V +D+ ++EK
Sbjct: 573 WIEVGKKV-HMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVD 631
Query: 543 LLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFH 602
L HSE+LA+A+GLL G I++MKNLR+C DCH + SKVT R+I++RD RFH
Sbjct: 632 SLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFH 691
Query: 603 HFLNGACSCGDFW 615
HF NG CSC D+W
Sbjct: 692 HFNNGECSCRDYW 704
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 135/281 (48%), Gaps = 24/281 (8%)
Query: 147 NTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKV 206
N+++ Y +G AR++FDEM +R+VVSW L++ Y +N + AR +F+ + ++ V
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 207 AWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIA 266
+WTAMV GY Q M EA F + E + V G I A K D +
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMM---- 167
Query: 267 ESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARA 326
P ++V+ + ++ + G V+EA +F M+ERN T+++MI G+ + R
Sbjct: 168 ------PVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDV 221
Query: 327 AIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMA 386
A KLF M E V++ +L+ T +G ++ + F V+P AC A
Sbjct: 222 ARKLFEVMPE----KTEVSWTSMLLGYTLSGRIEDAEEFFE-------VMPMKPVIACNA 270
Query: 387 DLL--GRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHG 425
++ G G + KA ++ + M N A W ++ A G
Sbjct: 271 MIVGFGEVGEISKARRVFDLMEDRDN-ATWRGMIKAYERKG 310
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/563 (36%), Positives = 313/563 (55%), Gaps = 48/563 (8%)
Query: 62 SYPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV 121
SY + +F + S ++ALI + +L + M+ + P SFT +L SA
Sbjct: 447 SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 506
Query: 122 TNLT---LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWT 178
+ L LG ++H + D+FV +++ +Y+ G
Sbjct: 507 SKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG--------------------- 545
Query: 179 ELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET 238
EL T A LFD ++ K V+W ++TGY QN P AL FR + G++
Sbjct: 546 ELCTVQA----------LFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQL 595
Query: 239 DEVTLAGAISACA-----QLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNV 293
+++ AC+ +LG A ++ + E F + +L+DMY+K G++
Sbjct: 596 CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAF-------IACSLIDMYAKNGSI 648
Query: 294 EEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVAC 353
++ VF G+KE++ ++++MI+G+ IHG A+ AIKLF EM T P+ +TF+GVL AC
Sbjct: 649 TQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTAC 708
Query: 354 THAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLV-ETMPVEPNGA 412
H+GL+ +G M+ +G+ P+ HYAC+ D+LGRAG L+KAL++V E M E +
Sbjct: 709 NHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVG 768
Query: 413 VWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMR 472
+W +LL + +H N ++ E V+ LFELEP NY+LLSN YA G+W+DV +VR+ M
Sbjct: 769 IWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMN 828
Query: 473 DKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVP 532
+ +L+K+ G SW+E N + F+ G+ EIK L ++ +GY P+ SV
Sbjct: 829 EMSLRKDAGCSWIE-LNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQ 887
Query: 533 YDIGDKEKRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRK 592
+D+ ++EK L HSEKLAL +GL+ T G+TI++ KNLRIC DCH SKV R+
Sbjct: 888 HDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMERE 947
Query: 593 IVVRDNMRFHHFLNGACSCGDFW 615
IVVRDN RFHHF NG CSCGD+W
Sbjct: 948 IVVRDNKRFHHFKNGVCSCGDYW 970
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 130/309 (42%), Gaps = 51/309 (16%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSM-RNQRITPISFTFSALFSAVTN 123
R +F + S N F ++A+I +Y+ + E L + M + P FT+ + A
Sbjct: 140 RFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAG 199
Query: 124 LT-LGTQLHAHALLL--GFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTEL 180
++ +G L H L++ G D+FV N L
Sbjct: 200 MSDVGIGLAVHGLVVKTGLVEDVFVGNA-------------------------------L 228
Query: 181 ITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLRE----AGM 236
++ Y +G + A +LFD + ++ V+W +M+ ++ N +E+ + E
Sbjct: 229 VSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAF 288
Query: 237 ETDEVTLAGAISACA---QLGASKDA-DWVRCIAESSGFGPARNVLVGSALVDMYSKCGN 292
D TL + CA ++G K W + + +++ +AL+DMYSKCG
Sbjct: 289 MPDVATLVTVLPVCAREREIGLGKGVHGW------AVKLRLDKELVLNNALMDMYSKCGC 342
Query: 293 VEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLE--TEIKPNHVTFVGVL 350
+ A +F+ +N ++++M+ GF+ G + +ML ++K + VT + +
Sbjct: 343 ITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAV 402
Query: 351 VACTHAGLV 359
C H +
Sbjct: 403 PVCFHESFL 411
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 116/272 (42%), Gaps = 21/272 (7%)
Query: 171 QRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALE-FFR 229
+ D V T +IT YA G + +R +FD L K+ W A+++ Y++N + E LE F
Sbjct: 117 RNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIE 176
Query: 230 CLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSK 289
+ + D T I ACA + V + +G +V VG+ALV Y
Sbjct: 177 MISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGL--VEDVFVGNALVSFYGT 234
Query: 290 CGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETE----IKPNHVT 345
G V +A +F M ERN +++SMI F+ +G + + L EM+E P+ T
Sbjct: 235 HGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVAT 294
Query: 346 FVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYA----CMADLLGRAGHLEKALQL 401
V VL C + G+ + + V D + D+ + G + A Q+
Sbjct: 295 LVTVLPVCAREREIGLGKGVHG-----WAVKLRLDKELVLNNALMDMYSKCGCITNA-QM 348
Query: 402 VETMPVEPNGAVWGALLGA----SHVHGNPDV 429
+ M N W ++G HG DV
Sbjct: 349 IFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDV 380
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/555 (37%), Positives = 314/555 (56%), Gaps = 44/555 (7%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN--- 123
LF Q+P N ++ +I EAL L+ +M I S F+ + +A N
Sbjct: 181 LFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPA 240
Query: 124 LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
+G Q+H + LGF + +V+ + LIT
Sbjct: 241 FHMGIQVHGLIIKLGFLYEEYVSAS-------------------------------LITF 269
Query: 184 YARNGDMNSARELFDELDVKDKVA-WTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
YA + +R++FDE V ++VA WTA+++GY+ N ++AL F + + ++ T
Sbjct: 270 YANCKRIGDSRKVFDE-KVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQST 328
Query: 243 LAGAISACAQLGASKDADWVRCI-AESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
A +++C+ LG DW + + + G + VG++LV MYS GNV +A +VF
Sbjct: 329 FASGLNSCSALGT---LDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFI 385
Query: 302 GMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
+ +++ +++S+IVG A HGR + A +F +M+ +P+ +TF G+L AC+H G +++
Sbjct: 386 KIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEK 445
Query: 362 GQYLFSNME-GCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGA 420
G+ LF M G + HY CM D+LGR G L++A +L+E M V+PN VW ALL A
Sbjct: 446 GRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSA 505
Query: 421 SHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNP 480
+H + D E + +F L+ + Y+LLSN YASAGRW +VS++R M+ + K P
Sbjct: 506 CRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKP 565
Query: 481 GYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEK 540
G SWV R G HEF +GD P + I + L+ L E+LK +GY P+ S +D+ D++K
Sbjct: 566 GSSWVVIR-GKKHEFFSGD--QPHCSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQK 622
Query: 541 RFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMR 600
+L HSE+LA+AFGL+NT GS + +MKNLR+CEDCH V+ S V GR+IV+RD +R
Sbjct: 623 EEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIR 682
Query: 601 FHHFLNGACSCGDFW 615
FHHF NG CSCGD+W
Sbjct: 683 FHHFKNGTCSCGDYW 697
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 145/302 (48%), Gaps = 9/302 (2%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL 124
R +F+QVPSP+ LY+ +I YT +AL L+ M + + +++++ S +
Sbjct: 55 REVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVV----SWNSMISGC--V 108
Query: 125 TLGTQLHAHALLLGFASDIFVNNT-MIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
G A L V+ T M+ +SG +D A ++F +MP +D +W ++
Sbjct: 109 ECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHG 168
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
Y + G ++ A +LF ++ K+ ++WT M+ G QN EAL+ F+ + +++
Sbjct: 169 YLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPF 228
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
I+ACA A V + GF V ++L+ Y+ C + ++ VF
Sbjct: 229 TCVITACANAPAFHMGIQVHGLIIKLGF--LYEEYVSASLITFYANCKRIGDSRKVFDEK 286
Query: 304 KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQ 363
+++++ G++++ + A+ +F ML I PN TF L +C+ G +D G+
Sbjct: 287 VHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGK 346
Query: 364 YL 365
+
Sbjct: 347 EM 348
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 103/198 (52%), Gaps = 10/198 (5%)
Query: 159 LDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQN 218
+D AR+VF+++P V +T++IT Y R+ + A LFDE+ V+D V+W +M++G +
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVEC 110
Query: 219 AMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVL 278
A++ F + E + V+ ++ C + G A+ R + P ++
Sbjct: 111 GDMNTAVKLFDEMPERSV----VSWTAMVNGCFRSGKVDQAE--RLFYQM----PVKDTA 160
Query: 279 VGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETE 338
+++V Y + G V++A +F+ M +N ++++MI G + R+ A+ LF ML
Sbjct: 161 AWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCC 220
Query: 339 IKPNHVTFVGVLVACTHA 356
IK F V+ AC +A
Sbjct: 221 IKSTSRPFTCVITACANA 238
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 157/406 (38%), Gaps = 84/406 (20%)
Query: 27 QLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIRAY 86
Q+H I + Y+ +L+ T + + R +F + +++AL+ Y
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLI----TFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGY 301
Query: 87 TLRGPFTEALRLYTSMRNQRITPISFTFSALF---SAVTNLTLGTQLHAHALLLGFASDI 143
+L +AL +++ M I P TF++ SA+ L G ++H A+ LG +D
Sbjct: 302 SLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDA 361
Query: 144 FVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVK 203
FV N+++ MY SG ++ A VF ++ ++ +VSW +I
Sbjct: 362 FVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSII---------------------- 399
Query: 204 DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVR 263
G AQ+ K A F + E DE+T G +SAC+ G + +
Sbjct: 400 ---------VGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLF 450
Query: 264 CIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGR 323
S R + + +VD+ +CG ++EA + M
Sbjct: 451 YYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMV------------------- 491
Query: 324 ARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFS---NMEGCYGVVPSAD 380
+KPN + ++ +L AC VD+G+ + N++ S+
Sbjct: 492 ---------------VKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDS-----KSSA 531
Query: 381 HYACMADLLGRAGHLEKALQLVETMP----VEPNGAVWGALLGASH 422
Y ++++ AG +L M ++ G+ W + G H
Sbjct: 532 AYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKH 577
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/609 (33%), Positives = 329/609 (54%), Gaps = 41/609 (6%)
Query: 12 VVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRH-LTTTFPHLPIHSYPRLLFSQ 70
V S+L C LR L +IY + L ++ +++ + +R+ L + R +F+
Sbjct: 310 VSSVLRACGHLRDL-SLAKYIYNYML-KAGFVLESTVRNILIDVYAKCGDMITARDVFNS 367
Query: 71 VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT---NLTLG 127
+ + ++++I Y G EA++L+ M T+ L S T +L G
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG 427
Query: 128 TQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARN 187
LH++ + G D+ V+N +I MY K G + + K+F M D V+W +I+A R
Sbjct: 428 KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRF 487
Query: 188 GDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAI 247
GD + ++ ++ R++ + D T +
Sbjct: 488 GDFATGLQVTTQM-------------------------------RKSEVVPDMATFLVTL 516
Query: 248 SACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERN 307
CA L A + + C FG + +G+AL++MYSKCG +E + VF M R+
Sbjct: 517 PMCASLAAKRLGKEIHCCLLR--FGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRD 574
Query: 308 AFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFS 367
T++ MI + ++G A++ F +M ++ I P+ V F+ ++ AC+H+GLVD+G F
Sbjct: 575 VVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFE 634
Query: 368 NMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNP 427
M+ Y + P +HYAC+ DLL R+ + KA + ++ MP++P+ ++W ++L A G+
Sbjct: 635 KMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDM 694
Query: 428 DVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVES 487
+ AE VSR + EL P++ G +L SN YA+ +WD VS +RK ++DK++ KNPGYSW+E
Sbjct: 695 ETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEV 754
Query: 488 RNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDI-GDKEKRFLLMA 546
V H F +GD P+ I K+L+ L + GY+P+ V ++ ++EKR L+
Sbjct: 755 GKNV-HVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICG 813
Query: 547 HSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFLN 606
HSE+LA+AFGLLNT+ G+ +++MKNLR+C DCH V SK+ GR+I+VRD RFH F +
Sbjct: 814 HSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKD 873
Query: 607 GACSCGDFW 615
G CSC D W
Sbjct: 874 GTCSCKDRW 882
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 193/415 (46%), Gaps = 44/415 (10%)
Query: 16 LNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV-PSP 74
L++ + L +++HA + L S + L+ + H + +F +V P+
Sbjct: 14 LSSSSNLNELRRIHALVISLGLDSSDFFSGKLI----DKYSHFREPASSLSVFRRVSPAK 69
Query: 75 NPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL---TLGTQLH 131
N +L++++IRA++ G F EAL Y +R +++P +TF ++ A L +G ++
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129
Query: 132 AHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMN 191
L +GF SD+FV N ++ MY + G L AR+VFDEMP RD+VSW LI+ Y+ +G
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG--- 186
Query: 192 SARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACA 251
+EALE + L+ + + D T++ + A
Sbjct: 187 ----------------------------YYEEALEIYHELKNSWIVPDSFTVSSVLPAFG 218
Query: 252 QLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTY 311
L K + A S G V+V + LV MY K +A VF M R++ +Y
Sbjct: 219 NLLVVKQGQGLHGFALKS--GVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSY 276
Query: 312 SSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEG 371
++MI G+ ++++F E L+ + KP+ +T VL AC H + +Y+++ M
Sbjct: 277 NTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLK 335
Query: 372 CYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGN 426
G V + + D+ + G + A + +M + + W +++ G+
Sbjct: 336 A-GFVLESTVRNILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIISGYIQSGD 388
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 123/260 (47%), Gaps = 35/260 (13%)
Query: 108 TPISFTF-SALFSAVTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVF 166
T +S F S S+ +NL ++HA + LG S F + +I Y S+ VF
Sbjct: 3 TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVF 62
Query: 167 DEM-PQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEAL 225
+ P ++V W +I A+++NG LF EAL
Sbjct: 63 RRVSPAKNVYLWNSIIRAFSKNG-------LF------------------------PEAL 91
Query: 226 EFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVD 285
EF+ LRE+ + D+ T I ACA L ++ D V GF ++ VG+ALVD
Sbjct: 92 EFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGF--ESDLFVGNALVD 149
Query: 286 MYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVT 345
MYS+ G + A VF M R+ +++S+I G++ HG A+++++E+ + I P+ T
Sbjct: 150 MYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFT 209
Query: 346 FVGVLVACTHAGLVDQGQYL 365
VL A + +V QGQ L
Sbjct: 210 VSSVLPAFGNLLVVKQGQGL 229
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/555 (34%), Positives = 304/555 (54%), Gaps = 38/555 (6%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL 124
R +F ++P ++A+I E L L+ M +P +T ++FS L
Sbjct: 45 RKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGL 104
Query: 125 ---TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
++G Q+H + + G D+ VN+++ MY+
Sbjct: 105 RSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYM--------------------------- 137
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
RNG + + + V++ VAW ++ G AQN P+ L ++ ++ +G +++
Sbjct: 138 ----RNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKI 193
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
T +S+C+ L + AE+ G + V V S+L+ MYSKCG + +A F
Sbjct: 194 TFVTVLSSCSDLAIRGQGQQIH--AEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFS 251
Query: 302 GMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLE-TEIKPNHVTFVGVLVACTHAGLVD 360
++ + +SSMI + HG+ AI+LF M E T ++ N V F+ +L AC+H+GL D
Sbjct: 252 EREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKD 311
Query: 361 QGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGA 420
+G LF M YG P HY C+ DLLGRAG L++A ++ +MP++ + +W LL A
Sbjct: 312 KGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSA 371
Query: 421 SHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNP 480
++H N ++A+ V + + +++PN+ Y+LL+N +ASA RW DVS VRK MRDKN+KK
Sbjct: 372 CNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEA 431
Query: 481 GYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEK 540
G SW E + G +H+F GD + EI L +L +K GY P+ +SV +D+ ++EK
Sbjct: 432 GISWFEHK-GEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEK 490
Query: 541 RFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMR 600
L+ HSEKLA+AF L+ G+ I+I+KNLR+C DCH+ S + R+I +RD R
Sbjct: 491 ESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSR 550
Query: 601 FHHFLNGACSCGDFW 615
FHHF+NG CSCGD+W
Sbjct: 551 FHHFINGKCSCGDYW 565
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 130/281 (46%), Gaps = 4/281 (1%)
Query: 150 IKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWT 209
+ MY K G SA V+ M +++ +S LI Y R GD+ +AR++FDE+ + W
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 210 AMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESS 269
AM+ G Q +E L FR + G DE TL S A L + + +
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIH--GYTI 118
Query: 270 GFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIK 329
+G +++V S+L MY + G +++ V R M RN ++++I+G A +G +
Sbjct: 119 KYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLY 178
Query: 330 LFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLL 389
L+ M + +PN +TFV VL +C+ + QGQ + + G + + +
Sbjct: 179 LYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKI-GASSVVAVVSSLISMY 237
Query: 390 GRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVA 430
+ G L A + E + +W +++ A HG D A
Sbjct: 238 SKCGCLGDAAKAFSEREDE-DEVMWSSMISAYGFHGQGDEA 277
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 186/582 (31%), Positives = 319/582 (54%), Gaps = 41/582 (7%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT---NLTLGTQL 130
P+ +++L+ Y +G +A+ + M+ + P + + S+L AV +L LG +
Sbjct: 188 PDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAI 247
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDM 190
H + L D++V T+I MY+K+G L AR VFD M +++V+W L++ + +
Sbjct: 248 HGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLL 307
Query: 191 NSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGA 246
A L ++ + D + W ++ +GYA P++AL+ ++E G+ + V+
Sbjct: 308 KDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAI 367
Query: 247 ISACAQLGASKDADWVRCIAESSGFGP-----------------------------ARNV 277
S C++ G ++A V + G GP +N+
Sbjct: 368 FSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNL 427
Query: 278 L----VGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYE 333
+ V +ALVDMY K G+++ A +F G+K ++ +++ M++G+A+ GR I F
Sbjct: 428 ICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSV 487
Query: 334 MLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAG 393
MLE ++P+ +TF VL C ++GLV +G F M YG++P+ +H +CM DLLGR+G
Sbjct: 488 MLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSG 547
Query: 394 HLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSN 453
+L++A ++TM ++P+ +WGA L + +H + ++AEI + L LEP+N NY+++ N
Sbjct: 548 YLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMIN 607
Query: 454 TYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALD 513
Y++ RW+DV R+R LMR+ ++ +SW++ + +H F A HP+ +I L
Sbjct: 608 LYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQI-DQTVHIFYAEGKTHPDEGDIYFELY 666
Query: 514 DLLERLKAIGYLPNLSSVPYDIGDKEKRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLR 573
L+ +K GY+P+ S + DI D EK LLM H+EKLA+ +GL+ + I+++KN
Sbjct: 667 KLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTN 726
Query: 574 ICEDCHIVMCGASKVTGRKIVVRDNMRFHHFLNGACSCGDFW 615
IC D H V S + R+IV+++ R HHF +G CSC D W
Sbjct: 727 ICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 171/362 (47%), Gaps = 13/362 (3%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN--- 123
LF ++P + ++ ++ G + +A+ L+ M+ T L +N
Sbjct: 45 LFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEG 104
Query: 124 LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
G Q+H + L LG S++ + N++I MY ++G L+ +RKVF+ M R++ SW ++++
Sbjct: 105 FAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSS 164
Query: 184 YARNGDMNSARELFDELDV----KDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETD 239
Y + G ++ A L DE+++ D V W ++++GYA + K+A+ + ++ AG++
Sbjct: 165 YTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPS 224
Query: 240 EVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNV 299
+++ + A A+ G K + + +V V + L+DMY K G + A V
Sbjct: 225 TSSISSLLQAVAEPGHLKLGKAIHGYILRNQL--WYDVYVETTLIDMYIKTGYLPYARMV 282
Query: 300 FRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLV 359
F M +N ++S++ G + + A L M + IKP+ +T+ + G
Sbjct: 283 FDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKP 342
Query: 360 DQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVE---PNGAVWGA 416
++ + M+ GV P+ + + + G+ AL++ M E PN A
Sbjct: 343 EKALDVIGKMKE-KGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMST 401
Query: 417 LL 418
LL
Sbjct: 402 LL 403
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 112/272 (41%), Gaps = 35/272 (12%)
Query: 126 LGTQLHAHALLLGFA-SDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAY 184
LG +H + G SD V + + Y + L A K+FDEMP+RD ++W E++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 185 ARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLA 244
R+G+ A ELF E+ A+ + + Q KE R + +
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLR------- 117
Query: 245 GAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK 304
G NV + ++L+ MYS+ G +E + VF MK
Sbjct: 118 --------------------------LGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMK 151
Query: 305 ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQY 364
+RN +++S++ + G AI L EM +KP+ VT+ +L GL
Sbjct: 152 DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIA 211
Query: 365 LFSNMEGCYGVVPSADHYACMADLLGRAGHLE 396
+ M+ G+ PS + + + GHL+
Sbjct: 212 VLKRMQ-IAGLKPSTSSISSLLQAVAEPGHLK 242
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 106/253 (41%), Gaps = 36/253 (14%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL---GTQ 129
+PN ++A+ + G F AL+++ M+ + + P + T S L + L+L G +
Sbjct: 358 APNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKE 417
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGD 189
+H L D +V ++ MY KSG L SA ++F + + + S
Sbjct: 418 VHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLAS------------- 464
Query: 190 MNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISA 249
W M+ GYA +E + F + EAGME D +T +S
Sbjct: 465 ------------------WNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSV 506
Query: 250 CAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER-NA 308
C G ++ W S +G + S +VD+ + G ++EA++ + M + +A
Sbjct: 507 CKNSGLVQEG-WKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDA 565
Query: 309 FTYSSMIVGFAIH 321
+ + + IH
Sbjct: 566 TIWGAFLSSCKIH 578
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 359 bits (922), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 194/500 (38%), Positives = 291/500 (58%), Gaps = 15/500 (3%)
Query: 26 KQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIRA 85
KQLHAH R + ++ ++ LL +P Y R LF + FLY+ LI+A
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLLL--------IPNLVYARKLFDHHQNSCTFLYNKLIQA 56
Query: 86 YTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQL---HAHALLLGFASD 142
Y + E++ LY + + P TF+ +F+A + + L H+ GF SD
Sbjct: 57 YYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESD 116
Query: 143 IFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDV 202
F T+I Y K G L AR+VFDEM +RDV W +IT Y R GDM +A ELFD +
Sbjct: 117 SFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPR 176
Query: 203 KDKVAWTAMVTGYAQNAMPKEALEFFRCL-REAGMETDEVTLAGAISACAQLGASKDADW 261
K+ +WT +++G++QN EAL+ F C+ ++ ++ + +T+ + ACA LG +
Sbjct: 177 KNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRR 236
Query: 262 VRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM-KERNAFTYSSMIVGFAI 320
+ A +GF N+ V +A ++MYSKCG ++ A +F + +RN +++SMI A
Sbjct: 237 LEGYARENGF--FDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLAT 294
Query: 321 HGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSAD 380
HG+ A+ LF +ML KP+ VTFVG+L+AC H G+V +GQ LF +ME + + P +
Sbjct: 295 HGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLE 354
Query: 381 HYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFEL 440
HY CM DLLGR G L++A L++TMP++P+ VWG LLGA HGN ++AEI S LF+L
Sbjct: 355 HYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKL 414
Query: 441 EPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDV 500
EP N GN +++SN YA+ +WD V R+RKLM+ + + K GYS+ +H+F D
Sbjct: 415 EPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDK 474
Query: 501 KHPEINEIKKALDDLLERLK 520
HP EI + L+++ R+K
Sbjct: 475 SHPRSYEIYQVLEEIFRRMK 494
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 358 bits (920), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 192/556 (34%), Positives = 302/556 (54%), Gaps = 38/556 (6%)
Query: 64 PRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN 123
+ +F ++ + Y+++I Y G EA++L+ M + I+P +T +A+ +
Sbjct: 350 AKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCAR 409
Query: 124 LTL---GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTEL 180
L G ++H DIFV+N ++ MY K
Sbjct: 410 YRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKC------------------------ 445
Query: 181 ITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCL-REAGMETD 239
G M A +F E+ VKD ++W ++ GY++N EAL F L E D
Sbjct: 446 -------GSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPD 498
Query: 240 EVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNV 299
E T+A + ACA L A + +G+ R+V ++LVDMY+KCG + A+ +
Sbjct: 499 ERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHV--ANSLVDMYAKCGALLLAHML 556
Query: 300 FRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLV 359
F + ++ +++ MI G+ +HG + AI LF +M + I+ + ++FV +L AC+H+GLV
Sbjct: 557 FDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLV 616
Query: 360 DQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLG 419
D+G F+ M + P+ +HYAC+ D+L R G L KA + +E MP+ P+ +WGALL
Sbjct: 617 DEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLC 676
Query: 420 ASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKN 479
+H + +AE V+ +FELEP N G Y+L++N YA A +W+ V R+RK + + L+KN
Sbjct: 677 GCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKN 736
Query: 480 PGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKE 539
PG SW+E + G ++ F+AGD +PE I+ L + R+ GY P D + E
Sbjct: 737 PGCSWIEIK-GRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEME 795
Query: 540 KRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNM 599
K L HSEKLA+A G++++ G I++ KNLR+C DCH + SK+T R+IV+RD+
Sbjct: 796 KEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSN 855
Query: 600 RFHHFLNGACSCGDFW 615
RFH F +G CSC FW
Sbjct: 856 RFHQFKDGHCSCRGFW 871
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 189/419 (45%), Gaps = 53/419 (12%)
Query: 12 VVSILNTCT---TLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLF 68
+ S+L C +L+ K++ I + I +NL L+ + + +F
Sbjct: 97 LCSVLQLCADSKSLKDGKEVDNFIRGNGF----VIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 69 SQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSAL---FSAVTNLT 125
+V ++ L+ G F+ ++ L+ M + + S+TFS + FS++ ++
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 126 LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYA 185
G QLH L GF V N+++ Y+K
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLK------------------------------ 242
Query: 186 RNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
N ++SAR++FDE+ +D ++W +++ GY N + ++ L F + +G+E D T+
Sbjct: 243 -NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 301
Query: 246 AISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE 305
+ CA V I + F +R + L+DMYSKCG+++ A VFR M +
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACF--SREDRFCNTLLDMYSKCGDLDSAKAVFREMSD 359
Query: 306 RNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQG--- 362
R+ +Y+SMI G+A G A A+KLF EM E I P+ T VL C L+D+G
Sbjct: 360 RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRV 419
Query: 363 -QYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGA 420
+++ N G V +A + D+ + G +++A + M V+ + W ++G
Sbjct: 420 HEWIKENDLGFDIFVSNA-----LMDMYAKCGSMQEAELVFSEMRVK-DIISWNTIIGG 472
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 146/339 (43%), Gaps = 48/339 (14%)
Query: 10 WQVVSILNTCTTLR---RAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRL 66
+ V ++LN C R K++H I ++L ++ L+ + L
Sbjct: 398 YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALM----DMYAKCGSMQEAEL 453
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSM-RNQRITPISFTFSALFSAVTNLT 125
+FS++ + ++ +I Y+ EAL L+ + +R +P T + + A +L+
Sbjct: 454 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 513
Query: 126 L---GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELIT 182
G ++H + + G+ SD V N+++ MY K G L A +FD++ +D+VSWT +I
Sbjct: 514 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI- 572
Query: 183 AYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
GY + KEA+ F +R+AG+E DE++
Sbjct: 573 ------------------------------AGYGMHGFGKEAIALFNQMRQAGIEADEIS 602
Query: 243 LAGAISACAQLGASKDADW--VRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
+ AC+ G D W + P V + +VDM ++ G++ +AY
Sbjct: 603 FVSLLYACSHSGLV-DEGWRFFNIMRHECKIEPT--VEHYACIVDMLARTGDLIKAYRFI 659
Query: 301 RGMK-ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETE 338
M +A + +++ G IH + A K+ ++ E E
Sbjct: 660 ENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELE 698
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 357 bits (917), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 198/560 (35%), Positives = 307/560 (54%), Gaps = 43/560 (7%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPF-TEALRLYTSMRNQ-RITPISFTFSALFSAVT 122
R +F ++ + ++ALI Y TEA+ L++ M Q + P FTFS+ F A
Sbjct: 325 RKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACG 384
Query: 123 NLT---LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTE 179
NL+ +G Q+ A G AS+ V N++I M+VKS
Sbjct: 385 NLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSD---------------------- 422
Query: 180 LITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETD 239
M A+ F+ L K+ V++ + G +N ++A + + E +
Sbjct: 423 ---------RMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVS 473
Query: 240 EVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNV 299
T A +S A +G+ + + + ++ G + N V +AL+ MYSKCG+++ A V
Sbjct: 474 AFTFASLLSGVANVGSIRKGEQIH--SQVVKLGLSCNQPVCNALISMYSKCGSIDTASRV 531
Query: 300 FRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLV 359
F M+ RN +++SMI GFA HG A ++ F +M+E +KPN VT+V +L AC+H GLV
Sbjct: 532 FNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLV 591
Query: 360 DQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLG 419
+G F++M + + P +HYACM DLL RAG L A + + TMP + + VW LG
Sbjct: 592 SEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLG 651
Query: 420 ASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKN 479
A VH N ++ ++ +R + EL+PN Y+ LSN YA AG+W++ + +R+ M+++NL K
Sbjct: 652 ACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKE 711
Query: 480 PGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKE 539
G SW+E + IH+F GD HP ++I LD L+ +K GY+P+ V + + ++
Sbjct: 712 GGCSWIEVGDK-IHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEEN 770
Query: 540 KRF----LLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVV 595
LL HSEK+A+AFGL++T +++ KNLR+C DCH M S V+GR+IV+
Sbjct: 771 DEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVL 830
Query: 596 RDNMRFHHFLNGACSCGDFW 615
RD RFHHF +G CSC D+W
Sbjct: 831 RDLNRFHHFKDGKCSCNDYW 850
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 158/353 (44%), Gaps = 49/353 (13%)
Query: 14 SILNTCT---TLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
S+L +C R K +HA + ++ S + +L+ + + + +
Sbjct: 67 SLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM-RR 125
Query: 71 VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN---LTLG 127
+ +SA++ Y G +A++++ + P + ++A+ A +N + +G
Sbjct: 126 FGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVG 185
Query: 128 TQLHAHALLLG-FASDIFVNNTMIKMYVK-SGCLDSARKVFDEMPQRDVVSWTELITAYA 185
+ G F SD+ V ++I M+VK ++A KVFD+M + +VV+
Sbjct: 186 RVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVT--------- 236
Query: 186 RNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
WT M+T Q P+EA+ FF + +G E+D+ TL+
Sbjct: 237 ----------------------WTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSS 274
Query: 246 AISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKC---GNVEEAYNVFRG 302
SACA+L + A SG V +LVDMY+KC G+V++ VF
Sbjct: 275 VFSACAELENLSLGKQLHSWAIRSGLVDD----VECSLVDMYAKCSADGSVDDCRKVFDR 330
Query: 303 MKERNAFTYSSMIVGFAIHGR-ARAAIKLFYEML-ETEIKPNHVTFVGVLVAC 353
M++ + +++++I G+ + A AI LF EM+ + ++PNH TF AC
Sbjct: 331 MEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC 383
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 137/562 (24%), Positives = 224/562 (39%), Gaps = 117/562 (20%)
Query: 51 LTTTFP---HLPIHSYPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRI 107
++ +FP LPI S P + S + L + A LRG + AL L M I
Sbjct: 4 ISFSFPSPAKLPIKSQPSV--SNRINVADRLILRHLNAGDLRGAVS-ALDL---MARDGI 57
Query: 108 TPI-SFTFSALFSAVT---NLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSAR 163
P+ S TFS+L + + LG +HA + D + N++I +Y KSG A
Sbjct: 58 RPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAE 117
Query: 164 KVFDEM---PQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAM 220
VF+ M +RDVVSW+ ++ Y NG REL
Sbjct: 118 DVFETMRRFGKRDVVSWSAMMACYGNNG-----REL------------------------ 148
Query: 221 PKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGF-----GPAR 275
+A++ F E G+ ++ I AC+ ++D+V + GF
Sbjct: 149 --DAIKVFVEFLELGLVPNDYCYTAVIRACS------NSDFVGVGRVTLGFLMKTGHFES 200
Query: 276 NVLVGSALVDMYSKCGN-VEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEM 334
+V VG +L+DM+ K N E AY VF M E N T++ MI G R AI+ F +M
Sbjct: 201 DVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDM 260
Query: 335 LETEIKPNHVTFVGVLVACTH----------------AGLVDQGQYLFSNM--------- 369
+ + + + T V AC +GLVD + +M
Sbjct: 261 VLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGS 320
Query: 370 -EGCYGVVPSADHYACMADLLGRAGHLE------KALQLVETM----PVEPNGAVWGALL 418
+ C V + ++ M+ G+++ +A+ L M VEPN + +
Sbjct: 321 VDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAF 380
Query: 419 GASHVHGNPDVAEIVSRHLFE--LEPN-NIGNYLLLSNTYASAGRWDDVSRVRKLMRDKN 475
A +P V + V F+ L N ++ N ++ + + + R +D R + + +KN
Sbjct: 381 KACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVI--SMFVKSDRMEDAQRAFESLSEKN 438
Query: 476 LKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLER---LKAIGYLPNLSSVP 532
L + FL G ++ + K L ++ ER + A + LS V
Sbjct: 439 LVS-------------YNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVA 485
Query: 533 YDIGDKEKRFLLMAHSEKLALA 554
++G K + + KL L+
Sbjct: 486 -NVGSIRKGEQIHSQVVKLGLS 506
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 356 bits (914), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 196/553 (35%), Positives = 309/553 (55%), Gaps = 38/553 (6%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFS--AVTNL 124
+F+++P + +S +I + G EA+ L+ MR + P FT S++ + A+
Sbjct: 304 VFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKC 363
Query: 125 T-LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
+ LG QLH + +GF DI+V+N LI
Sbjct: 364 SGLGEQLHGLVVKVGFDLDIYVSNA-------------------------------LIDV 392
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
YA+ M++A +LF EL K++V+W ++ GY +A FR + EVT
Sbjct: 393 YAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTF 452
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
+ A+ ACA L + V +A + A+ V V ++L+DMY+KCG+++ A +VF M
Sbjct: 453 SSALGACASLASMDLGVQVHGLAIKTN--NAKKVAVSNSLIDMYAKCGDIKFAQSVFNEM 510
Query: 304 KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQ 363
+ + +++++I G++ HG R A+++ M + + KPN +TF+GVL C++AGL+DQGQ
Sbjct: 511 ETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQ 570
Query: 364 YLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHV 423
F +M +G+ P +HY CM LLGR+G L+KA++L+E +P EP+ +W A+L AS
Sbjct: 571 ECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMN 630
Query: 424 HGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYS 483
N + A + + ++ P + Y+L+SN YA A +W +V+ +RK M++ +KK PG S
Sbjct: 631 QNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLS 690
Query: 484 WVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFL 543
W+E + G +H F G HP++ I L+ L + GY+P+ ++V D+ D+EK
Sbjct: 691 WIEHQ-GDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKR 749
Query: 544 LMAHSEKLALAFGLLNTDAG-STIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFH 602
L HSE+LALA+GL+ + + I IMKNLRIC DCH M S + R +V+RD RFH
Sbjct: 750 LWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFH 809
Query: 603 HFLNGACSCGDFW 615
HF G CSCGD W
Sbjct: 810 HFHAGVCSCGDHW 822
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 159/368 (43%), Gaps = 46/368 (12%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL 124
R +F + + +++ ++ Y G F ++L+L + MR P ++TF
Sbjct: 201 RTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTF---------- 250
Query: 125 TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTEL 180
+T +K + G D A+ V ++ + D L
Sbjct: 251 ----------------------DTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGL 288
Query: 181 ITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
+ Y + GDM+ A ++F+E+ D V W+ M+ + QN EA++ F +REA + +E
Sbjct: 289 LQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNE 348
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
TL+ ++ CA S + + + GF ++ V +AL+D+Y+KC ++ A +F
Sbjct: 349 FTLSSILNGCAIGKCSGLGEQLHGLVVKVGFD--LDIYVSNALIDVYAKCEKMDTAVKLF 406
Query: 301 RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVD 360
+ +N +++++IVG+ G A +F E L ++ VTF L AC +D
Sbjct: 407 AELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMD 466
Query: 361 QGQYLFSNMEGCYGVVPSADHYAC---MADLLGRAGHLEKALQLVETMPVEPNGAVWGAL 417
G + G +A A + D+ + G ++ A + M + A W AL
Sbjct: 467 LG----VQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMET-IDVASWNAL 521
Query: 418 LGASHVHG 425
+ HG
Sbjct: 522 ISGYSTHG 529
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 125/300 (41%), Gaps = 36/300 (12%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFT-FSALFSAVTNLT 125
LF ++P N + L + Y + P RL+ + P FT F LF ++
Sbjct: 106 LFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHR--EGHELNPHVFTSFLKLFVSLDKAE 163
Query: 126 LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYA 185
+ LH+ + LG+ S+ FV +I Y G +DSAR VF+ + +D+V W +++ Y
Sbjct: 164 ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 186 RNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
NG +++L+ C+R AG + T
Sbjct: 224 ENGYF-------------------------------EDSLKLLSCMRMAGFMPNNYTFDT 252
Query: 246 AISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE 305
A+ A LGA A V + + + VG L+ +Y++ G++ +A+ VF M +
Sbjct: 253 ALKASIGLGAFDFAKGVHGQILKTCY--VLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPK 310
Query: 306 RNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYL 365
+ +S MI F +G A+ LF M E + PN T +L C G+ L
Sbjct: 311 NDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQL 370
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 108/240 (45%), Gaps = 15/240 (6%)
Query: 9 EWQVVSILNTCTTLR---RAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPR 65
E+ + SILN C + +QLH + + Y+ L+ +
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALI----DVYAKCEKMDTAV 403
Query: 66 LLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT 125
LF+++ S N ++ +I Y G +A ++ +++ TFS+ A +L
Sbjct: 404 KLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLA 463
Query: 126 ---LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELIT 182
LG Q+H A+ A + V+N++I MY K G + A+ VF+EM DV SW LI+
Sbjct: 464 SMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALIS 523
Query: 183 AYARNGDMNSARELFDELDVKD----KVAWTAMVTGYAQNAMPKEALEFFRCL-REAGME 237
Y+ +G A + D + +D + + +++G + + + E F + R+ G+E
Sbjct: 524 GYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIE 583
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 9/235 (3%)
Query: 173 DVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLR 232
D+ + L+ AY + G A LFDE+ ++ V++ + GYA ++ + + L
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLH 138
Query: 233 EAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGN 292
G E + + L ++ W+ G+ N VG+AL++ YS CG+
Sbjct: 139 REGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDS--NAFVGAALINAYSVCGS 196
Query: 293 VEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVA 352
V+ A VF G+ ++ ++ ++ + +G ++KL M PN+ TF L A
Sbjct: 197 VDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKA 256
Query: 353 CTHAGLVDQGQYLFSN-MEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMP 406
G D + + ++ CY + P + L + G + A ++ MP
Sbjct: 257 SIGLGAFDFAKGVHGQILKTCYVLDPRVG--VGLLQLYTQLGDMSDAFKVFNEMP 309
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 354 bits (909), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 193/544 (35%), Positives = 300/544 (55%), Gaps = 37/544 (6%)
Query: 79 YSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL---GTQLHAHAL 135
++++I AY +AL LY M + FT +++ +A+T+L G Q H +
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 136 LLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARE 195
GF + V + +I Y K G D M + +
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGCDG----------------------------MYDSEK 299
Query: 196 LFDELDVKDKVAWTAMVTGYAQNA-MPKEALEFFRCLREAGMETDEVTLAGAISACAQLG 254
+F E+ D V W M++GY+ N + +EA++ FR ++ G D+ + SAC+ L
Sbjct: 300 VFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLS 359
Query: 255 ASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSM 314
+ + +A S P+ + V +AL+ +Y K GN+++A VF M E NA +++ M
Sbjct: 360 SPSQCKQIHGLAIKSHI-PSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCM 418
Query: 315 IVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYG 374
I G+A HG A+ L+ ML++ I PN +TFV VL AC H G VD+GQ F+ M+ +
Sbjct: 419 IKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFK 478
Query: 375 VVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVS 434
+ P A+HY+CM DLLGRAG LE+A + ++ MP +P W ALLGA H N +AE +
Sbjct: 479 IEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAA 538
Query: 435 RHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHE 494
L ++P Y++L+N YA A +W++++ VRK MR K ++K PG SW+E + H
Sbjct: 539 NELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKK-HV 597
Query: 495 FLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFLLMA---HSEKL 551
F+A D HP I E+ + L+++++++K +GY+ + + + M HSEKL
Sbjct: 598 FVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKL 657
Query: 552 ALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFLNGACSC 611
A+AFGL++T G + ++KNLRIC DCH + S V GR+I+VRDN+RFH F +G CSC
Sbjct: 658 AVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSC 717
Query: 612 GDFW 615
GD+W
Sbjct: 718 GDYW 721
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 130/255 (50%), Gaps = 15/255 (5%)
Query: 108 TPISF-TFSALF---SAVTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSAR 163
TP F TF L A +L G LHA + AS +++N + +Y K G L AR
Sbjct: 4 TPWKFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYAR 63
Query: 164 KVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKE 223
F + +V S+ ++ AYA++ ++ AR+LFDE+ D V++ +++GYA
Sbjct: 64 AAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFA 123
Query: 224 ALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVR---CIAESSGFGPARNVLVG 280
A+ F+ +R+ G E D TL+G I+AC D ++ C + S GF + V
Sbjct: 124 AMVLFKRMRKLGFEVDGFTLSGLIAACCD-----RVDLIKQLHCFSVSGGFDSYSS--VN 176
Query: 281 SALVDMYSKCGNVEEAYNVFRGMKE-RNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEI 339
+A V YSK G + EA +VF GM E R+ +++SMIV + H A+ L+ EM+
Sbjct: 177 NAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGF 236
Query: 340 KPNHVTFVGVLVACT 354
K + T VL A T
Sbjct: 237 KIDMFTLASVLNALT 251
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 122/493 (24%), Positives = 199/493 (40%), Gaps = 88/493 (17%)
Query: 25 AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIR 84
K LHA +Y ++ SS ++N H + SY R F PN F Y+ +++
Sbjct: 27 GKSLHA-LYVKSIVASSTYLSN---HFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVK 82
Query: 85 AYT-------LRGPFTE------------------------ALRLYTSMRNQRITPISFT 113
AY R F E A+ L+ MR FT
Sbjct: 83 AYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFT 142
Query: 114 FSALFSAVTN-LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQ- 171
S L +A + + L QLH ++ GF S VNN + Y K G L A VF M +
Sbjct: 143 LSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDEL 202
Query: 172 RDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCL 231
RD VSW +I AY ++ + A L+ E+ K
Sbjct: 203 RDEVSWNSMIVAYGQHKEGAKALALYKEMIFK---------------------------- 234
Query: 232 REAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCG 291
G + D TLA ++A L +GF +N VGS L+D YSKCG
Sbjct: 235 ---GFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGF--HQNSHVGSGLIDFYSKCG 289
Query: 292 NVEEAYN---VFRGMKERNAFTYSSMIVGFAIHGR-ARAAIKLFYEMLETEIKPNHVTFV 347
+ Y+ VF+ + + +++MI G++++ + A+K F +M +P+ +FV
Sbjct: 290 GCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFV 349
Query: 348 GVLVACTHAGLVDQ-----GQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLV 402
V AC++ Q G + S++ V +A + L ++G+L+ A +
Sbjct: 350 CVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNA-----LISLYYKSGNLQDARWVF 404
Query: 403 ETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFE--LEPNNIGNYLLLSNTYASAGR 460
+ MP E N + ++ HG+ A ++ + + + + PN I +LS A G+
Sbjct: 405 DRMP-ELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSAC-AHCGK 462
Query: 461 WDDVSRVRKLMRD 473
D+ M++
Sbjct: 463 VDEGQEYFNTMKE 475
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 138/303 (45%), Gaps = 43/303 (14%)
Query: 10 WQVVSILNTCTTLRR---AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRL 66
+ + S+LN T+L +Q H + + HQ+S++ + L+ + ++ +
Sbjct: 241 FTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEK- 299
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFT-EALRLYTSMRNQRITPISFTFSALFSAVTNLT 125
+F ++ SP+ +++ +I Y++ + EA++ + M+ P +F + SA +NL+
Sbjct: 300 VFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLS 359
Query: 126 LGT---QLHAHALLLGFASD-IFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
+ Q+H A+ S+ I VNN +I +Y KSG L AR VFD MP+ + VS+ +I
Sbjct: 360 SPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMI 419
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
GYAQ+ EAL ++ + ++G+ +++
Sbjct: 420 -------------------------------KGYAQHGHGTEALLLYQRMLDSGIAPNKI 448
Query: 242 TLAGAISACAQLGASKDA-DWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
T +SACA G + ++ + E+ P S ++D+ + G +EEA
Sbjct: 449 TFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHY--SCMIDLLGRAGKLEEAERFI 506
Query: 301 RGM 303
M
Sbjct: 507 DAM 509
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 11/208 (5%)
Query: 13 VSILNTCTTLR---RAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFS 69
V + + C+ L + KQ+H + ++ + + N L L +L R +F
Sbjct: 349 VCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQD---ARWVFD 405
Query: 70 QVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL--TLG 127
++P N ++ +I+ Y G TEAL LY M + I P TF A+ SA +
Sbjct: 406 RMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDE 465
Query: 128 TQLHAHALLLGFASDIFVN--NTMIKMYVKSGCLDSARKVFDEMPQR-DVVSWTELITAY 184
Q + + + F + + MI + ++G L+ A + D MP + V+W L+ A
Sbjct: 466 GQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGAC 525
Query: 185 ARNGDMNSARELFDELDVKDKVAWTAMV 212
++ +M A +EL V +A T V
Sbjct: 526 RKHKNMALAERAANELMVMQPLAATPYV 553
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 352 bits (904), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 201/615 (32%), Positives = 331/615 (53%), Gaps = 52/615 (8%)
Query: 12 VVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
+V +L C ++++ +++H+H+ + L I +LLR + H+ +LLF
Sbjct: 8 IVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHA--QLLFDHF 65
Query: 72 PS-PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRIT-PISFTFS-ALFSAVTNLTLGT 128
S P+ ++ LIR ++ ++ Y M ++ P FTF+ AL S ++
Sbjct: 66 DSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPK 125
Query: 129 QLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNG 188
L H + ++SG LD D + T L+ Y+ NG
Sbjct: 126 CLEIHGSV-----------------IRSGFLD------------DAIVATSLVRCYSANG 156
Query: 189 DMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAIS 248
+ A ++FDE+ V+D V+W M+ ++ + +AL ++ + G+ D TL +S
Sbjct: 157 SVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLS 216
Query: 249 ACAQLGA-------SKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
+CA + A + A +RC ES V V +AL+DMY+KCG++E A VF
Sbjct: 217 SCAHVSALNMGVMLHRIACDIRC--ESC-------VFVSNALIDMYAKCGSLENAIGVFN 267
Query: 302 GMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
GM++R+ T++SMI+G+ +HG AI F +M+ + ++PN +TF+G+L+ C+H GLV +
Sbjct: 268 GMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKE 327
Query: 362 GQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGAS 421
G F M + + P+ HY CM DL GRAG LE +L+++ + +W LLG+
Sbjct: 328 GVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSC 387
Query: 422 HVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPG 481
+H N ++ E+ + L +LE N G+Y+L+++ Y++A + +RKL+R +L+ PG
Sbjct: 388 KIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPG 447
Query: 482 YSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSS-VPYDIGDKEK 540
+SW+E + V H+F+ D HPE I L +++ R GY P S+ + D+
Sbjct: 448 WSWIEIGDQV-HKFVVDDKMHPESAVIYSELGEVINRAILAGYKPEDSNRTAPTLSDRCL 506
Query: 541 RFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMR 600
+HSEKLA+A+GL+ T AG+T++I KNLR+C DCH SK R+I+VRD +R
Sbjct: 507 GSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVR 566
Query: 601 FHHFLNGACSCGDFW 615
FHHF +G CSC D+W
Sbjct: 567 FHHFADGICSCNDYW 581
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 352 bits (903), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 183/517 (35%), Positives = 304/517 (58%), Gaps = 15/517 (2%)
Query: 7 ALEWQVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRL 66
L W V S+ L+ KQ H ++ L++ + + + + HL Y
Sbjct: 13 GLNWFVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNA-GHL---RYAYS 68
Query: 67 LFSQVPSPNPFLYSALIRAYTLR---GPFTEALRLYTSMRNQRITPISFTFSALFSA--- 120
+F+ P PN +L++ +IRA +L + A+ +Y + P +FTF +
Sbjct: 69 VFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVR 128
Query: 121 VTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTEL 180
V+++ G Q+H ++ GF S + V +I+MY G L ARK+FDEM +DV W L
Sbjct: 129 VSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNAL 188
Query: 181 ITAYARNGDMNSARELFDELD--VKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET 238
+ Y + G+M+ AR L + + V+++V+WT +++GYA++ EA+E F+ + +E
Sbjct: 189 LAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEP 248
Query: 239 DEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYN 298
DEVTL +SACA LG+ + + + + G R V + +A++DMY+K GN+ +A +
Sbjct: 249 DEVTLLAVLSACADLGSLELGERICSYVDHRGMN--RAVSLNNAVIDMYAKSGNITKALD 306
Query: 299 VFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGL 358
VF + ERN T++++I G A HG A+ +F M++ ++PN VTF+ +L AC+H G
Sbjct: 307 VFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGW 366
Query: 359 VDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALL 418
VD G+ LF++M YG+ P+ +HY CM DLLGRAG L +A +++++MP + N A+WG+LL
Sbjct: 367 VDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLL 426
Query: 419 GASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKK 478
AS+VH + ++ E L +LEPNN GNY+LL+N Y++ GRWD+ +R +M+ +KK
Sbjct: 427 AASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKK 486
Query: 479 NPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDL 515
G S +E N V ++F++GD+ HP++ I + L ++
Sbjct: 487 MAGESSIEVENRV-YKFISGDLTHPQVERIHEILQEM 522
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 351 bits (900), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 187/523 (35%), Positives = 294/523 (56%), Gaps = 16/523 (3%)
Query: 9 EWQVVSILNTCTTLR---RAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPR 65
E+ S+L+ C+ L + Q+H+ I + YI + L+ + + +
Sbjct: 152 EYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALV----DMYSKCGNVNDAQ 207
Query: 66 LLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT 125
+F ++ N +++LI + GP EAL ++ M R+ P T +++ SA +L+
Sbjct: 208 RVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLS 267
Query: 126 ---LGTQLHAHALLLG-FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
+G ++H + +DI ++N + MY K + AR +FD MP R+V++ T +I
Sbjct: 268 AIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMI 327
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
+ YA +AR +F ++ ++ V+W A++ GY QN +EAL F L+ +
Sbjct: 328 SGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHY 387
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGF----GPARNVLVGSALVDMYSKCGNVEEAY 297
+ A + ACA L GF G ++ VG++L+DMY KCG VEE Y
Sbjct: 388 SFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGY 447
Query: 298 NVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAG 357
VFR M ER+ ++++MI+GFA +G A++LF EMLE+ KP+H+T +GVL AC HAG
Sbjct: 448 LVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAG 507
Query: 358 LVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGAL 417
V++G++ FS+M +GV P DHY CM DLLGRAG LE+A ++E MP++P+ +WG+L
Sbjct: 508 FVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSL 567
Query: 418 LGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLK 477
L A VH N + + V+ L E+EP+N G Y+LLSN YA G+W+DV VRK MR + +
Sbjct: 568 LAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVT 627
Query: 478 KNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLK 520
K PG SW++ + G H F+ D HP +I LD L+ ++
Sbjct: 628 KQPGCSWIKIQ-GHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 167/312 (53%), Gaps = 24/312 (7%)
Query: 111 SFTFSALFSAVTNLTLGTQL--------HAHALLLGFASDIFVNNTMIKMYVKSGCLDSA 162
SFT S+ F+ + + + ++L HA + GF+++IF+ N +I Y K G L+
Sbjct: 15 SFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDG 74
Query: 163 RKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPK 222
R+VFD+MPQR++ +W ++T + G ++ A LF + +D+ W +MV+G+AQ+ +
Sbjct: 75 RQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCE 134
Query: 223 EALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSA 282
EAL +F + + G +E + A +SAC+ L V + S F +V +GSA
Sbjct: 135 EALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPF--LSDVYIGSA 192
Query: 283 LVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPN 342
LVDMYSKCGNV +A VF M +RN +++S+I F +G A A+ +F MLE+ ++P+
Sbjct: 193 LVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPD 252
Query: 343 HVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYA-------CMADLLGRAGHL 395
VT V+ AC + GQ + +G V D D+ + +
Sbjct: 253 EVTLASVISACASLSAIKVGQEV-------HGRVVKNDKLRNDIILSNAFVDMYAKCSRI 305
Query: 396 EKALQLVETMPV 407
++A + ++MP+
Sbjct: 306 KEARFIFDSMPI 317
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 350 bits (898), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 208/609 (34%), Positives = 317/609 (52%), Gaps = 45/609 (7%)
Query: 14 SILNTCTT---LRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
S L C T + + LH + L + II N L + + + S R + Q
Sbjct: 367 SALAACFTPDFFEKGRILHGLVVVSGLFYNQ-IIGNAL---VSMYGKIGEMSESRRVLLQ 422
Query: 71 VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV----TNLTL 126
+P + ++ALI Y +AL + +MR + ++ T ++ SA L
Sbjct: 423 MPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER 482
Query: 127 GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYAR 186
G LHA+ + GF SD V N+ LIT YA+
Sbjct: 483 GKPLHAYIVSAGFESDEHVKNS-------------------------------LITMYAK 511
Query: 187 NGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGA 246
GD++S+++LF+ LD ++ + W AM+ A + +E L+ +R G+ D+ + +
Sbjct: 512 CGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEG 571
Query: 247 ISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER 306
+SA A+L ++ + +A GF + + +A DMYSKCG + E + R
Sbjct: 572 LSAAAKLAVLEEGQQLHGLAVKLGF--EHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNR 629
Query: 307 NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLF 366
+ +++ +I HG F+EMLE IKP HVTFV +L AC+H GLVD+G +
Sbjct: 630 SLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYY 689
Query: 367 SNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGN 426
+ +G+ P+ +H C+ DLLGR+G L +A + MP++PN VW +LL + +HGN
Sbjct: 690 DMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGN 749
Query: 427 PDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVE 486
D + +L +LEP + Y+L SN +A+ GRW+DV VRK M KN+KK SWV+
Sbjct: 750 LDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVK 809
Query: 487 SRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFLLMA 546
++ V F GD HP+ EI L+D+ + +K GY+ + S D +++K L
Sbjct: 810 LKDKV-SSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWN 868
Query: 547 HSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFLN 606
HSE+LALA+ L++T GST++I KNLRIC DCH V S+V GR+IV+RD RFHHF
Sbjct: 869 HSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFER 928
Query: 607 GACSCGDFW 615
G CSC D+W
Sbjct: 929 GLCSCKDYW 937
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 182/431 (42%), Gaps = 56/431 (12%)
Query: 12 VVSILNTC----TTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLL 67
+ S++ C + R Q+H + + L Y+ T +L HL + + S R +
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAIL-HLYGVYG---LVSCSRKV 116
Query: 68 FSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTNL 124
F ++P N +++L+ Y+ +G E + +Y MR + + + S + S+ + +
Sbjct: 117 FEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDE 176
Query: 125 TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAY 184
+LG Q+ + G S + V N++I M
Sbjct: 177 SLGRQIIGQVVKSGLESKLAVENSLISML------------------------------- 205
Query: 185 ARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLA 244
G+++ A +FD++ +D ++W ++ YAQN +E+ F +R E + T++
Sbjct: 206 GSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVS 265
Query: 245 GAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK 304
+S + K + + GF V V + L+ MY+ G EA VF+ M
Sbjct: 266 TLLSVLGHVDHQKWGRGIHGLVVKMGFDSV--VCVCNTLLRMYAGAGRSVEANLVFKQMP 323
Query: 305 ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQY 364
++ +++S++ F GR+ A+ L M+ + N+VTF L AC ++G+
Sbjct: 324 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 383
Query: 365 LFSNMEGCYGVVPSADHY-----ACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLG 419
L VV S Y + + G+ G + ++ +++ MP + W AL+G
Sbjct: 384 LHGL------VVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIG 436
Query: 420 ASHVHGNPDVA 430
+PD A
Sbjct: 437 GYAEDEDPDKA 447
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 161/367 (43%), Gaps = 53/367 (14%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV--- 121
R LF +P N ++ ++ G + E + + M + I P SF ++L +A
Sbjct: 12 RHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRS 71
Query: 122 -TNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTEL 180
+ G Q+H G SD++V+ ++ +Y G + +RKVF+EMP R+VVSWT L
Sbjct: 72 GSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSL 131
Query: 181 ITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
+ Y+ G+ P+E ++ ++ +R G+ +E
Sbjct: 132 MVGYSDKGE-------------------------------PEEVIDIYKGMRGEGVGCNE 160
Query: 241 VTLAGAISACAQLGASKDADWVR-CIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNV 299
+++ IS+C L KD R I + G + V ++L+ M GNV+ A +
Sbjct: 161 NSMSLVISSCGLL---KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYI 217
Query: 300 FRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLV 359
F M ER+ +++S+ +A +G + ++F M + N T +L H V
Sbjct: 218 FDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH---V 274
Query: 360 DQGQYLFSNMEGCYGVVPSA--DHYACMADLLGR----AGHLEKALQLVETMPVEPNGAV 413
D ++ G +G+V D C+ + L R AG +A + + MP + +
Sbjct: 275 DHQKW----GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLIS 329
Query: 414 WGALLGA 420
W +L+ +
Sbjct: 330 WNSLMAS 336
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 187/430 (43%), Gaps = 49/430 (11%)
Query: 15 ILNTCTTLRR---AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
++++C L+ +Q+ + + L +S + N L + + ++ Y +F Q+
Sbjct: 166 VISSCGLLKDESLGRQIIGQVVKSGL-ESKLAVENSLISMLGSMGNV---DYANYIFDQM 221
Query: 72 PSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTNLTLGT 128
+ ++++ AY G E+ R+++ MR S T S L S V + G
Sbjct: 222 SERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGR 281
Query: 129 QLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNG 188
+H + +GF S + V NT+++MY +G A VF +MP +D++SW L+ ++ +G
Sbjct: 282 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG 341
Query: 189 DMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAIS 248
R L +AL + +G + VT A++
Sbjct: 342 -----RSL--------------------------DALGLLCSMISSGKSVNYVTFTSALA 370
Query: 249 ACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNA 308
AC + + + SG N ++G+ALV MY K G + E+ V M R+
Sbjct: 371 ACFTPDFFEKGRILHGLVVVSGL--FYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDV 428
Query: 309 FTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAG-LVDQGQYLFS 367
++++I G+A A+ F M + N++T V VL AC G L+++G+ L +
Sbjct: 429 VAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHA 488
Query: 368 NMEGCYGVVPSADHYA-CMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGN 426
+ S +H + + + G L + L + N W A+L A+ HG+
Sbjct: 489 YI--VSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGH 545
Query: 427 -PDVAEIVSR 435
+V ++VS+
Sbjct: 546 GEEVLKLVSK 555
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 169/367 (46%), Gaps = 45/367 (12%)
Query: 66 LLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSM--RNQRITPISFTFSALFSAVTN 123
L+F Q+P+ + +++L+ ++ G +AL L SM + + ++FT SAL + T
Sbjct: 317 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFT-SALAACFTP 375
Query: 124 --LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
G LH ++ G + + N ++ MY
Sbjct: 376 DFFEKGRILHGLVVVSGLFYNQIIGNALVSMY---------------------------- 407
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
+ G+M+ +R + ++ +D VAW A++ GYA++ P +AL F+ +R G+ ++ +
Sbjct: 408 ---GKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYI 464
Query: 242 TLAGAISACAQLG-ASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
T+ +SAC G + + S+GF + V ++L+ MY+KCG++ + ++F
Sbjct: 465 TVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEH--VKNSLITMYAKCGDLSSSQDLF 522
Query: 301 RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVD 360
G+ RN T+++M+ A HG +KL +M + + +F L A +++
Sbjct: 523 NGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLE 582
Query: 361 QGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAV--WGALL 418
+GQ L + G + + AD+ + G + ++V+ +P N ++ W L+
Sbjct: 583 EGQQL-HGLAVKLGFEHDSFIFNAAADMYSKCGEIG---EVVKMLPPSVNRSLPSWNILI 638
Query: 419 GASHVHG 425
A HG
Sbjct: 639 SALGRHG 645
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 120/252 (47%), Gaps = 21/252 (8%)
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
Y + G + AR LFD + V+++V+W M++G + + E +EFFR + + G++ +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 244 AGAISACAQLGAS-KDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
A ++AC + G+ ++ V SG +V V +A++ +Y G V + VF
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGL--LSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 303 MKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ- 361
M +RN +++S++VG++ G I ++ M + N + V+ +C GL+
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDE 176
Query: 362 -------GQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVW 414
GQ + S +E V S + +LG G+++ A + + M E + W
Sbjct: 177 SLGRQIIGQVVKSGLESKLAVENS------LISMLGSMGNVDYANYIFDQMS-ERDTISW 229
Query: 415 GALLGASHVHGN 426
++ A +G+
Sbjct: 230 NSIAAAYAQNGH 241
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 345 bits (885), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 204/587 (34%), Positives = 318/587 (54%), Gaps = 50/587 (8%)
Query: 45 TNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRN 104
T + HL ++ L + R LF ++ PN ++++I Y G AL ++ M
Sbjct: 64 TFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHE 123
Query: 105 QR-ITPISFTFSALFSAVTNLT---LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLD 160
R + P +TF+++F A + L +G +HA + G +I V+++++ M
Sbjct: 124 DRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDM-------- 175
Query: 161 SARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDV--KDKVAWTAMVTGYAQN 218
Y + D+ +AR +FD + ++ V+WT+M+T YAQN
Sbjct: 176 -----------------------YGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQN 212
Query: 219 AMPKEALEFFRCLREA--GMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARN 276
A EA+E FR A ++ LA ISAC+ LG + + G+ N
Sbjct: 213 ARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYES--N 270
Query: 277 VLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLE 336
+V ++L+DMY+KCG++ A +F ++ + +Y+SMI+ A HG AA+KLF EM+
Sbjct: 271 TVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVA 330
Query: 337 TEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLE 396
I PN+VT +GVL AC+H+GLV++G S M YGVVP + HY C+ D+LGR G ++
Sbjct: 331 GRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVD 390
Query: 397 KALQLVETMPV--EPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNT 454
+A +L +T+ V E +WGALL A +HG ++ S+ L + Y+ LSN
Sbjct: 391 EAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNA 450
Query: 455 YASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDD 514
YA +G W+D +R M+ K SW+E+++ V + F AGD+ E EI++ L D
Sbjct: 451 YAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSV-YVFHAGDLSCDESGEIERFLKD 509
Query: 515 LLERLKAIGY------LPNLSSVPYDIGDKEKRFLLMAHSEKLALAFGLLNTDAGSTIKI 568
L +R+K G+ + SSV D+ ++ K ++ H E+LALA+GLL+ AGSTI+I
Sbjct: 510 LEKRMKERGHRGSSSMITTSSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRI 569
Query: 569 MKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFLNGACSCGDFW 615
M NLR+C DCH S++ R+IVVRD RFH F NG+C+C D+W
Sbjct: 570 MNNLRMCRDCHEAFKLISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 116/251 (46%), Gaps = 38/251 (15%)
Query: 118 FSAVTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSW 177
S TN LH L LGFASD F N ++ YVK +++ARK+FDEM + +VVSW
Sbjct: 39 LSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSW 98
Query: 178 TELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLRE-AGM 236
T +I +GY P+ AL F+ + E +
Sbjct: 99 TSVI-------------------------------SGYNDMGKPQNALSMFQKMHEDRPV 127
Query: 237 ETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEA 296
+E T A AC+ L S+ + E SG RN++V S+LVDMY KC +VE A
Sbjct: 128 PPNEYTFASVFKACSALAESRIGKNIHARLEISGL--RRNIVVSSSLVDMYGKCNDVETA 185
Query: 297 YNVFRGM--KERNAFTYSSMIVGFAIHGRARAAIKLF--YEMLETEIKPNHVTFVGVLVA 352
VF M RN +++SMI +A + R AI+LF + T + N V+ A
Sbjct: 186 RRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISA 245
Query: 353 CTHAGLVDQGQ 363
C+ G + G+
Sbjct: 246 CSSLGRLQWGK 256
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 344 bits (883), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 198/615 (32%), Positives = 324/615 (52%), Gaps = 55/615 (8%)
Query: 15 ILNTCTTLRRAKQLHAHIYRHNLHQSSYIITN--------LLRHLTTTFPHLPIHSYPRL 66
+L+ C + AK LH H + S I+ N LL L T F R
Sbjct: 137 LLHACIS---AKSLH-----HGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARK 188
Query: 67 LFSQVPSPNPF---LYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA--- 120
+F V + +++A+ Y+ G +AL +Y M I P +F+ S A
Sbjct: 189 IFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVD 248
Query: 121 VTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTEL 180
+ +L +G +HA + D V N ++K+Y++SG D
Sbjct: 249 LKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDD------------------- 289
Query: 181 ITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
AR++FD + ++ V W ++++ ++ E FR ++E +
Sbjct: 290 ------------ARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSW 337
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
TL + AC+++ A + S P +V + ++L+DMY KCG VE + VF
Sbjct: 338 ATLTTILPACSRVAALLTGKEIHAQILKSKEKP--DVPLLNSLMDMYGKCGEVEYSRRVF 395
Query: 301 RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVD 360
M ++ +++ M+ +AI+G I LF M+E+ + P+ +TFV +L C+ GL +
Sbjct: 396 DVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTE 455
Query: 361 QGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGA 420
G LF M+ + V P+ +HYAC+ D+LGRAG +++A++++ETMP +P+ ++WG+LL +
Sbjct: 456 YGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNS 515
Query: 421 SHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNP 480
+HGN V EI ++ LF LEP+N GNY+++SN YA A WD+V ++R++M+ + +KK
Sbjct: 516 CRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEA 575
Query: 481 GYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEK 540
G SWV+ ++ + G + +E KK +L E ++ GY PN S V +D+ ++ K
Sbjct: 576 GCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETK 635
Query: 541 RFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMR 600
+ HSE+LA + L++T G I+I KNLR+C DCH M S+VT R IV+RD R
Sbjct: 636 ANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKR 695
Query: 601 FHHFLNGACSCGDFW 615
FHHF++G CSC D+W
Sbjct: 696 FHHFVDGICSCKDYW 710
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 344 bits (883), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 193/553 (34%), Positives = 316/553 (57%), Gaps = 37/553 (6%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL 124
+L+ +V + L +ALI Y+ +G TEA++ + SM +++ P +T++++ + NL
Sbjct: 221 KLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNL 280
Query: 125 T-LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
+G H L+ VKSG +SA + S T L+T
Sbjct: 281 KDIGNGKLIHGLM-----------------VKSG-FESA-----------LASQTSLLTM 311
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
Y R ++ + +F ++ ++V+WT++++G QN + AL FR + ++ + TL
Sbjct: 312 YLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTL 371
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
+ A+ C+ L ++ + I GF R+ GS L+D+Y KCG + A VF +
Sbjct: 372 SSALRGCSNLAMFEEGRQIHGIVTKYGFD--RDKYAGSGLIDLYGKCGCSDMARLVFDTL 429
Query: 304 KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQ 363
E + + ++MI +A +G R A+ LF M+ ++PN VT + VL+AC ++ LV++G
Sbjct: 430 SEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGC 489
Query: 364 YLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHV 423
LF + ++ + DHYACM DLLGRAG LE+A +++ T + P+ +W LL A V
Sbjct: 490 ELFDSFRK-DKIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKV 547
Query: 424 HGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYS 483
H ++AE ++R + E+EP + G +L+SN YAS G+W+ V ++ M+D LKKNP S
Sbjct: 548 HRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMS 607
Query: 484 WVESRNGVIHEFLAGDV-KHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRF 542
WVE N H F+AGD+ HP +I + L++L+++ K +GY+ + S V D+ + K
Sbjct: 608 WVEI-NKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKER 666
Query: 543 LLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFH 602
L HSEKLA+AF + + G +I+I+KNLR+C DCH + S+V R+I+ RD+ RFH
Sbjct: 667 SLHQHSEKLAIAFAVWR-NVGGSIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFH 725
Query: 603 HFLNGACSCGDFW 615
HF +G+CSCGD+W
Sbjct: 726 HFRDGSCSCGDYW 738
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 136/272 (50%), Gaps = 5/272 (1%)
Query: 175 VSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREA 234
+S ++L+ A + GD++ AR++FD + + V W +++ ++ KEA+E +R +
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 235 GMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVE 294
+ DE TL+ A + L K+A +A G NV VGSALVDMY K G
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGL-EVSNVFVGSALVDMYVKFGKTR 218
Query: 295 EAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACT 354
EA V ++E++ +++IVG++ G A+K F ML +++PN T+ VL++C
Sbjct: 219 EAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCG 278
Query: 355 HAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVW 414
+ + G+ + M G + + + R ++ +L++ + + PN W
Sbjct: 279 NLKDIGNGKLIHGLMVKS-GFESALASQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQVSW 336
Query: 415 GALLGASHVHGNPDVAEIVSRHLFE--LEPNN 444
+L+ +G ++A I R + ++PN+
Sbjct: 337 TSLISGLVQNGREEMALIEFRKMMRDSIKPNS 368
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 343 bits (881), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 206/592 (34%), Positives = 321/592 (54%), Gaps = 42/592 (7%)
Query: 27 QLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIRAY 86
QLH ++ + L + NL+ + + LP S R F P + +S++I +
Sbjct: 36 QLHGYVVKSGLSLIPLVANNLINFYSKS--QLPFDS--RRAFEDSPQKSSTTWSSIISCF 91
Query: 87 TLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT---LGTQLHAHALLLGFASDI 143
+L M + P + + L+ +G +H ++ G+ +D+
Sbjct: 92 AQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADV 151
Query: 144 FVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVK 203
FV ++++ MY K G + ARK+FDEMPQR+VV+W+ ++ YA+ G+ A LF
Sbjct: 152 FVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLF------ 205
Query: 204 DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVR 263
KEAL + ++ + + IS CA + +
Sbjct: 206 ------------------KEAL-------FENLAVNDYSFSSVISVCANSTLLELGRQIH 240
Query: 264 CIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGR 323
++ S + VGS+LV +YSKCG E AY VF + +N +++M+ +A H
Sbjct: 241 GLSIKS--SFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSH 298
Query: 324 ARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYA 383
+ I+LF M + +KPN +TF+ VL AC+HAGLVD+G+Y F M+ + P+ HYA
Sbjct: 299 TQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESR-IEPTDKHYA 357
Query: 384 CMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPN 443
+ D+LGRAG L++AL+++ MP++P +VWGALL + VH N ++A + +FEL P
Sbjct: 358 SLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPV 417
Query: 444 NIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVKHP 503
+ G ++ LSN YA+ GR++D ++ RKL+RD+ KK G SWVE RN V H F AG+ +H
Sbjct: 418 SSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKV-HTFAAGERRHE 476
Query: 504 EINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFLLMAHSEKLALAFGLLNTDAG 563
+ EI + L +L E ++ GY+ + S V ++ EK + HSE+LA+AFGL+ A
Sbjct: 477 KSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPAD 536
Query: 564 STIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFLNGACSCGDFW 615
I++MKNLR+C DCH + S T R I+VRDN RFH F +G CSC D+W
Sbjct: 537 RPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 340 bits (871), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 195/602 (32%), Positives = 307/602 (50%), Gaps = 63/602 (10%)
Query: 25 AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIR 84
+Q+HAH+ R L ++ I T ++ + + +F Q+ P + L+
Sbjct: 203 GRQIHAHVIRAGLCSNTSIETGIV----NMYVKCGWLVGAKRVFDQMAVKKPVACTGLMV 258
Query: 85 AYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL---TLGTQLHAHALLLGFAS 141
YT G +AL+L+ + + + SF FS + A +L LG Q+HA LG S
Sbjct: 259 GYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLES 318
Query: 142 DIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELD 201
++ V ++ Y+K +SA + F E+
Sbjct: 319 EVSVGTPLVDFYIKCSSFESACRA-------------------------------FQEIR 347
Query: 202 VKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET-DEVTLAGAISACAQL-----GA 255
+ V+W+A+++GY Q + +EA++ F+ LR + T AC+ L G
Sbjct: 348 EPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGG 407
Query: 256 SKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMI 315
AD ++ S +G SAL+ MYSKCG +++A VF M + +++ I
Sbjct: 408 QVHADAIKRSLIGSQYGE-------SALITMYSKCGCLDDANEVFESMDNPDIVAWTAFI 460
Query: 316 VGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGV 375
G A +G A A++LF +M+ +KPN VTF+ VL AC+HAGLV+QG++ M Y V
Sbjct: 461 SGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNV 520
Query: 376 VPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSR 435
P+ DHY CM D+ R+G L++AL+ ++ MP EP+ W L H N ++ EI
Sbjct: 521 APTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGE 580
Query: 436 HLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEF 495
L +L+P + Y+L N Y AG+W++ + + KLM ++ LKK SW++ + G IH F
Sbjct: 581 ELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEK-GKIHRF 639
Query: 496 LAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFLLMAHSEKLALAF 555
+ GD HP+ EI + L + ++ + N++ E+R L+ HSE+LA+AF
Sbjct: 640 IVGDKHHPQTQEIYEKLKEFDGFMEGDMFQCNMT---------ERREQLLDHSERLAIAF 690
Query: 556 GLLNT--DAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFLNGACSCGD 613
GL++ +A + IK+ KNLR C DCH S VTG +IV+RD+ RFHHF G CSC D
Sbjct: 691 GLISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCND 750
Query: 614 FW 615
+W
Sbjct: 751 YW 752
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 171/390 (43%), Gaps = 51/390 (13%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN--- 123
LF ++ N + +I AY +G +A+ L++ M P S ++ L ++ N
Sbjct: 140 LFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRA 199
Query: 124 LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
L G Q+HAH + G S+ + ++ MYVK G L A++VFD+M + V+ T L+
Sbjct: 200 LDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVG 259
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
Y + G A +LF +L V + V W + V F + +A +E+ L
Sbjct: 260 YTQAGRARDALKLFVDL-VTEGVEWDSFV---------------FSVVLKACASLEELNL 303
Query: 244 AGAISAC-AQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
I AC A+LG + V VG+ LVD Y KC + E A F+
Sbjct: 304 GKQIHACVAKLGLESE------------------VSVGTPLVDFYIKCSSFESACRAFQE 345
Query: 303 MKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKP-NHVTFVGVLVACTHAGLVDQ 361
++E N ++S++I G+ + A+K F + N T+ + AC+ +
Sbjct: 346 IREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNI 405
Query: 362 GQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGAS 421
G + ++ ++ S + + + + G L+ A ++ E+M P+ W A +
Sbjct: 406 GGQVHADAIK-RSLIGSQYGESALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISGH 463
Query: 422 HVHGNPDVAEIVSRHLFE------LEPNNI 445
+GN A LFE ++PN++
Sbjct: 464 AYYGNASEA----LRLFEKMVSCGMKPNSV 489
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 139/318 (43%), Gaps = 50/318 (15%)
Query: 15 ILNTCTTLRR---AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLL--FS 69
+L C +L KQ+HA + + L + T L+ ++ S+ F
Sbjct: 291 VLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDF------YIKCSSFESACRAFQ 344
Query: 70 QVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPI-SFTFSALFSAVTNL---T 125
++ PN +SA+I Y F EA++ + S+R++ + + SFT++++F A + L
Sbjct: 345 EIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCN 404
Query: 126 LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYA 185
+G Q+HA A+ + + +I MY K GCLD A +VF+ M D+V+WT I+ +A
Sbjct: 405 IGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHA 464
Query: 186 RNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
G+ + EAL F + GM+ + VT
Sbjct: 465 YYGNAS-------------------------------EALRLFEKMVSCGMKPNSVTFIA 493
Query: 246 AISACAQLGASKDADWVRCIAES-SGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK 304
++AC+ G + C+ + A + ++D+Y++ G ++EA + M
Sbjct: 494 VLTACSHAGLVEQGK--HCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMP 551
Query: 305 -ERNAFTYSSMIVGFAIH 321
E +A ++ + G H
Sbjct: 552 FEPDAMSWKCFLSGCWTH 569
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 135/333 (40%), Gaps = 40/333 (12%)
Query: 92 FTEALRLYTSMRNQRITPISFTFSALFSA---VTNLTLGTQLHAHALLLGFASDIFVNNT 148
EA M ++ S+++ LF A + +L+ G LH + + + N
Sbjct: 64 LNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNC 123
Query: 149 MIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAW 208
+++MY + L+ A K LFDE+ + V+
Sbjct: 124 VLQMYCECRSLEDADK-------------------------------LFDEMSELNAVSR 152
Query: 209 TAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCI-AE 267
T M++ YA+ + +A+ F + +G D+ + + L + D+ R I A
Sbjct: 153 TTMISAYAEQGILDKAVGLFSGMLASG---DKPPSSMYTTLLKSLVNPRALDFGRQIHAH 209
Query: 268 SSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAA 327
G N + + +V+MY KCG + A VF M + + ++VG+ GRAR A
Sbjct: 210 VIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDA 269
Query: 328 IKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMAD 387
+KLF +++ ++ + F VL AC ++ G+ + + + G+ + D
Sbjct: 270 LKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAK-LGLESEVSVGTPLVD 328
Query: 388 LLGRAGHLEKALQLVETMPVEPNGAVWGALLGA 420
+ E A + + + EPN W A++
Sbjct: 329 FYIKCSSFESACRAFQEIR-EPNDVSWSAIISG 360
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 15/232 (6%)
Query: 10 WQVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFS 69
+Q S+L C Q+HA + +L S Y + L+ T + +F
Sbjct: 394 FQACSVLADCNI---GGQVHADAIKRSLIGSQYGESALI----TMYSKCGCLDDANEVFE 446
Query: 70 QVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQ 129
+ +P+ ++A I + G +EALRL+ M + + P S TF A+ +A ++ L Q
Sbjct: 447 SMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQ 506
Query: 130 -LHAHALLL---GFASDIFVNNTMIKMYVKSGCLDSARKVFDEMP-QRDVVSWTELITAY 184
H +L A I + MI +Y +SG LD A K MP + D +SW ++
Sbjct: 507 GKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGC 566
Query: 185 ARNGDM---NSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLRE 233
+ ++ A E +LD +D + Y +EA E + + E
Sbjct: 567 WTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNE 618
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 340 bits (871), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 200/586 (34%), Positives = 310/586 (52%), Gaps = 79/586 (13%)
Query: 2 VGERRALEWQVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFP-HLPI 60
V RR E + + L C L + KQLHA I R NLH+ +I L+ L+ +L +
Sbjct: 13 VSSRRIFE-ERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAV 71
Query: 61 HSYPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA 120
+F+QV PN L ++LIRA+ +A +++ M+ + +FT+ L A
Sbjct: 72 R-----VFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKA 126
Query: 121 VTN---LTLGTQLHAHALLLGFASDIFVNNTMIKMY------------------------ 153
+ L + +H H LG +SDI+V N +I Y
Sbjct: 127 CSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTV 186
Query: 154 ---------VKSGCLDSARKVFDEMPQRDVVSWTELITAYAR------------------ 186
VK+G L AR++FDEMPQRD++SW ++ YAR
Sbjct: 187 SWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERN 246
Query: 187 -------------NGDMNSARELFDE--LDVKDKVAWTAMVTGYAQNAMPKEALEFFRCL 231
GDM AR +FD+ L K+ V WT ++ GYA+ + KEA +
Sbjct: 247 TVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQM 306
Query: 232 REAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCG 291
+G++ D + ++AC + G + I + S G N V +AL+DMY+KCG
Sbjct: 307 VASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLG--SNAYVLNALLDMYAKCG 364
Query: 292 NVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLV 351
N+++A++VF + +++ ++++M+ G +HG + AI+LF M I+P+ VTF+ VL
Sbjct: 365 NLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLC 424
Query: 352 ACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNG 411
+C HAGL+D+G F +ME Y +VP +HY C+ DLLGR G L++A+++V+TMP+EPN
Sbjct: 425 SCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNV 484
Query: 412 AVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLM 471
+WGALLGA +H D+A+ V +L +L+P + GNY LLSN YA+A W+ V+ +R M
Sbjct: 485 VIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKM 544
Query: 472 RDKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLE 517
+ ++K G S VE +G IHEF D HP+ ++I + L L+E
Sbjct: 545 KSMGVEKPSGASSVELEDG-IHEFTVFDKSHPKSDQIYQMLGSLIE 589
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 167/447 (37%), Positives = 271/447 (60%), Gaps = 6/447 (1%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT-- 122
R +F + P + ++ LI Y G +A+ +Y M ++ + P T L S+ +
Sbjct: 211 RKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSML 270
Query: 123 -NLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
+L G + + + G I + N ++ M+ K G + AR++FD + +R +VSWT +I
Sbjct: 271 GDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMI 330
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
+ YAR G ++ +R+LFD+++ KD V W AM+ G Q ++AL F+ ++ + + DE+
Sbjct: 331 SGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEI 390
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
T+ +SAC+QLGA W+ E + + NV +G++LVDMY+KCGN+ EA +VF
Sbjct: 391 TMIHCLSACSQLGALDVGIWIHRYIEK--YSLSLNVALGTSLVDMYAKCGNISEALSVFH 448
Query: 302 GMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
G++ RN+ TY+++I G A+HG A AI F EM++ I P+ +TF+G+L AC H G++
Sbjct: 449 GIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQT 508
Query: 362 GQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGAS 421
G+ FS M+ + + P HY+ M DLLGRAG LE+A +L+E+MP+E + AVWGALL
Sbjct: 509 GRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGC 568
Query: 422 HVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPG 481
+HGN ++ E ++ L EL+P++ G Y+LL Y A W+D R R++M ++ ++K PG
Sbjct: 569 RMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPG 628
Query: 482 YSWVESRNGVIHEFLAGDVKHPEINEI 508
S +E NG++ EF+ D PE +I
Sbjct: 629 CSSIEV-NGIVCEFIVRDKSRPESEKI 654
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 199/457 (43%), Gaps = 76/457 (16%)
Query: 12 VVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
++S+L C L KQ+ A + + L + + L+ + Y + +
Sbjct: 56 LLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYL--DYSVKILKGI 113
Query: 72 PSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQ---RITPISFTFSALFSAVTNL---T 125
+PN F ++ IR ++ E+ LY M P FT+ LF +L +
Sbjct: 114 ENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSS 173
Query: 126 LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYA 185
LG + H L L V+N I M+ G +++ARKVFDE P RD+VSW LI Y
Sbjct: 174 LGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYK 233
Query: 186 RNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
+ G+ ++A+ ++ + G++ D+VT+ G
Sbjct: 234 KIGE-------------------------------AEKAIYVYKLMESEGVKPDDVTMIG 262
Query: 246 AISACAQLG-ASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK 304
+S+C+ LG ++ ++ + E+ G + + +AL+DM+SKCG++ EA +F ++
Sbjct: 263 LVSSCSMLGDLNRGKEFYEYVKEN---GLRMTIPLVNALMDMFSKCGDIHEARRIFDNLE 319
Query: 305 ERNAFTYSSMIVGFAIHG-------------------------------RARAAIKLFYE 333
+R ++++MI G+A G R + A+ LF E
Sbjct: 320 KRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQE 379
Query: 334 MLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAG 393
M + KP+ +T + L AC+ G +D G ++ +E Y + + + D+ + G
Sbjct: 380 MQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEK-YSLSLNVALGTSLVDMYAKCG 438
Query: 394 HLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVA 430
++ +AL + + N + A++G +HG+ A
Sbjct: 439 NISEALSVFHGIQTR-NSLTYTAIIGGLALHGDASTA 474
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 338 bits (868), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 195/552 (35%), Positives = 298/552 (53%), Gaps = 44/552 (7%)
Query: 15 ILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSP 74
I+ C+T + + A + + +L+Q ++ + T+F L + +Q+ P
Sbjct: 779 IIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFIT-ACTSFKRLDLAVST---MTQMQEP 834
Query: 75 NPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT-LGTQLHAH 133
N F+Y+AL + + +L LY M ++P S+T+S+L A + + G L AH
Sbjct: 835 NVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAH 894
Query: 134 ALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSA 193
GF + + T+I Y +G + ARKVFDEMP+RD ++WT +++AY R DM+SA
Sbjct: 895 IWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSA 954
Query: 194 -------------------------------RELFDELDVKDKVAWTAMVTGYAQNAMPK 222
LF+++ VKD ++WT M+ GY+QN +
Sbjct: 955 NSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYR 1014
Query: 223 EALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSA 282
EA+ F + E G+ DEVT++ ISACA LG + V +GF +V +GSA
Sbjct: 1015 EAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGF--VLDVYIGSA 1072
Query: 283 LVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPN 342
LVDMYSKCG++E A VF + ++N F ++S+I G A HG A+ A+K+F +M +KPN
Sbjct: 1073 LVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPN 1132
Query: 343 HVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLV 402
VTFV V ACTHAGLVD+G+ ++ +M Y +V + +HY M L +AG + +AL+L+
Sbjct: 1133 AVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELI 1192
Query: 403 ETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWD 462
M EPN +WGALL +H N +AEI L LEP N G Y LL + YA RW
Sbjct: 1193 GNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWR 1252
Query: 463 DVSRVRKLMRDKNLKK-NPGYSW--VESRNGVIHEFLAGDVKHPEINEIKKALDDLLERL 519
DV+ +R MR+ ++K PG S ++ R+ H F A D H +E+ LD++ +++
Sbjct: 1253 DVAEIRGRMRELGIEKICPGTSSIRIDKRD---HLFAAADKSHSASDEVCLLLDEIYDQM 1309
Query: 520 KAIGYLPNLSSV 531
GY+ +V
Sbjct: 1310 GLAGYVQETENV 1321
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 337 bits (865), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 184/521 (35%), Positives = 287/521 (55%), Gaps = 50/521 (9%)
Query: 5 RRALEWQVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYP 64
RR WQ C +R KQ+HA + + L + ++ L+ + + P Y
Sbjct: 14 RRPKLWQ------NCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVP--GALKYA 65
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL 124
LF ++P P+ + + ++R + + LYT M + ++P +TF+ + A + L
Sbjct: 66 HKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKL 125
Query: 125 TLGTQ-------------------------LHAHALLLGFASDIFVNN---------TMI 150
+ HA+ LG AS++F ++ +M
Sbjct: 126 EWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMT 185
Query: 151 KMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTA 210
Y K G +D A ++FDEMP +D V+W +IT + +M+SARELFD KD V W A
Sbjct: 186 SGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNA 245
Query: 211 MVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRC-IAESS 269
M++GY PKEAL F+ +R+AG D VT+ +SACA LG + + I E++
Sbjct: 246 MISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETA 305
Query: 270 GFGPARNVLVGS----ALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRAR 325
+ ++ VG+ AL+DMY+KCG+++ A VFRG+K+R+ T++++IVG A+H A
Sbjct: 306 SV--SSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAE 362
Query: 326 AAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACM 385
+I++F EM ++ PN VTF+GV++AC+H+G VD+G+ FS M Y + P+ HY CM
Sbjct: 363 GSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCM 422
Query: 386 ADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNI 445
D+LGRAG LE+A VE+M +EPN VW LLGA ++GN ++ + + L + +
Sbjct: 423 VDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDES 482
Query: 446 GNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVE 486
G+Y+LLSN YAS G+WD V +VRK+ D +KK G S +E
Sbjct: 483 GDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 336 bits (862), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 195/620 (31%), Positives = 324/620 (52%), Gaps = 46/620 (7%)
Query: 3 GERRALEWQVVSILNTCTT---LRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLP 59
GE R E+ + +C+ + KQ H ++ L ++ L+ +
Sbjct: 130 GESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLV----YMYSLCS 185
Query: 60 IHSYPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSA--- 116
+ + +P + ++S+ + Y G F E L + N+ + T+ +
Sbjct: 186 GNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLR 245
Query: 117 LFSAVTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVS 176
LFS + +L L Q+H+ + GF +++ +I MY K G + A++V
Sbjct: 246 LFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRV----------- 294
Query: 177 WTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGM 236
FD+ ++ T ++ Y Q+ +EAL F + +
Sbjct: 295 --------------------FDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEV 334
Query: 237 ETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARN-VLVGSALVDMYSKCGNVEE 295
+E T A +++ A+L K D + + SG+ RN V+VG+ALV+MY+K G++E+
Sbjct: 335 PPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGY---RNHVMVGNALVNMYAKSGSIED 391
Query: 296 AYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTH 355
A F GM R+ T+++MI G + HG R A++ F M+ T PN +TF+GVL AC+H
Sbjct: 392 ARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSH 451
Query: 356 AGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWG 415
G V+QG + F+ + + V P HY C+ LL +AG + A + T P+E + W
Sbjct: 452 IGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWR 511
Query: 416 ALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKN 475
LL A +V N + + V+ + E PN+ G Y+LLSN +A + W+ V++VR LM ++
Sbjct: 512 TLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRG 571
Query: 476 LKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDI 535
+KK PG SW+ RN H FLA D +HPEI I + +++ ++K +GY P+++ +D+
Sbjct: 572 VKKEPGVSWIGIRNQT-HVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDV 630
Query: 536 GDKEKRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVV 595
++++ L HSEKLA+A+GL+ T S + + KN+RIC+DCH + SK++ R IV+
Sbjct: 631 DEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVI 690
Query: 596 RDNMRFHHFLNGACSCGDFW 615
RD+ RFHHFL+G CSC D+W
Sbjct: 691 RDSNRFHHFLDGQCSCCDYW 710
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 24/211 (11%)
Query: 124 LTLGTQLHAHALLLGFAS---DIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTEL 180
L +G +HAH ++ +S D + N++I +YVK ARK+FD MP+R+VVSW +
Sbjct: 47 LRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAM 106
Query: 181 ITAYARNGDMNSARELFDEL-----DVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAG 235
+ Y +G +LF + ++ T + + + +E +F C + G
Sbjct: 107 MKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYG 166
Query: 236 METDEV---TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGN 292
+ + E TL S C S + + +R + + P ++ V S+ + Y +CG
Sbjct: 167 LISHEFVRNTLVYMYSLC-----SGNGEAIRVLDDL----PYCDLSVFSSALSGYLECGA 217
Query: 293 VEEAYNVFRGMKER----NAFTYSSMIVGFA 319
+E +V R N TY S + F+
Sbjct: 218 FKEGLDVLRKTANEDFVWNNLTYLSSLRLFS 248
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 335 bits (860), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 191/561 (34%), Positives = 304/561 (54%), Gaps = 47/561 (8%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRIT--PISFTFSALFSAVTNL 124
+F ++ + ++A+I + G ++AL + M+ I P FT ++L A ++
Sbjct: 164 VFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSST 223
Query: 125 TL---GTQLHAHALLLGF--ASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTE 179
+ G Q+H + GF S + +++ +YVK G L
Sbjct: 224 GMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYL-------------------- 263
Query: 180 LITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETD 239
SAR+ FD++ K ++W++++ GYAQ EA+ F+ L+E + D
Sbjct: 264 -----------FSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQID 312
Query: 240 EVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNV 299
L+ I A + ++ +A G +VL +++VDMY KCG V+EA
Sbjct: 313 SFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL--NSVVDMYLKCGLVDEAEKC 370
Query: 300 FRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLV 359
F M+ ++ +++ +I G+ HG + ++++FYEML I+P+ V ++ VL AC+H+G++
Sbjct: 371 FAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMI 430
Query: 360 DQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLG 419
+G+ LFS + +G+ P +HYAC+ DLLGRAG L++A L++TMP++PN +W LL
Sbjct: 431 KEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLS 490
Query: 420 ASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKN 479
VHG+ ++ + V + L ++ N NY+++SN Y AG W++ R+L K LKK
Sbjct: 491 LCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKE 550
Query: 480 PGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLK-AIGYLPNLSSVPYDIGDK 538
G SWVE V H F +G+ HP I++ L + RL+ +GY+ L +DI D+
Sbjct: 551 AGMSWVEIEREV-HFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDE 609
Query: 539 EKRFLLMAHSEK----LALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIV 594
K L AHSEK LALA G LN G TI++ KNLR+C DCH + G SK+T V
Sbjct: 610 SKEENLRAHSEKLAIGLALATGGLN-QKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYV 668
Query: 595 VRDNMRFHHFLNGACSCGDFW 615
VRD +RFH F +G CSCGD+W
Sbjct: 669 VRDAVRFHSFEDGCCSCGDYW 689
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 159/366 (43%), Gaps = 51/366 (13%)
Query: 12 VVSILNTCTTL---RRAKQLHAHIYRH----NLHQSSYIITNLLRHLTTTFPHLPIHSYP 64
+VSIL CT + Q+H ++ + NL S+Y+I + P+ +Y
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCK------CREPLMAYK 62
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---V 121
+F +P N +SAL+ + L G +L L++ M Q I P FTFS A +
Sbjct: 63 --VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 122 TNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
L G Q+H L +GF + V N+++ MY K G ++ A KVF + R ++SW
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISW---- 176
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET--D 239
AM+ G+ +AL+ F ++EA ++ D
Sbjct: 177 ---------------------------NAMIAGFVHAGYGSKALDTFGMMQEANIKERPD 209
Query: 240 EVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNV 299
E TL + AC+ G + SGF + + +LVD+Y KCG + A
Sbjct: 210 EFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKA 269
Query: 300 FRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLV 359
F +KE+ ++SS+I+G+A G A+ LF + E + + ++ L+
Sbjct: 270 FDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALL 329
Query: 360 DQGQYL 365
QG+ +
Sbjct: 330 RQGKQM 335
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 132/295 (44%), Gaps = 37/295 (12%)
Query: 127 GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYAR 186
G Q+H + L G ++ +N +I MY K A KVFD MP+R+V
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNV------------ 72
Query: 187 NGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGA 246
V+W+A+++G+ N K +L F + G+ +E T +
Sbjct: 73 -------------------VSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTN 113
Query: 247 ISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER 306
+ AC L A + + GF V VG++LVDMYSKCG + EA VFR + +R
Sbjct: 114 LKACGLLNALEKGLQIHGFCLKIGF--EMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDR 171
Query: 307 NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIK--PNHVTFVGVLVACTHAGLVDQGQY 364
+ ++++MI GF G A+ F M E IK P+ T +L AC+ G++ G+
Sbjct: 172 SLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQ 231
Query: 365 LFSNM-EGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALL 418
+ + + SA + DL + G+L A + + + E W +L+
Sbjct: 232 IHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK-EKTMISWSSLI 285
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 82/185 (44%), Gaps = 9/185 (4%)
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
L + C + G S V C SG G N++ + L+DMY KC AY VF
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGL--NLITSNYLIDMYCKCREPLMAYKVFD 65
Query: 302 GMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
M ERN ++S+++ G ++G + ++ LF EM I PN TF L AC +++
Sbjct: 66 SMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEK 125
Query: 362 GQYL--FSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLG 419
G + F G +V + M GR EK + + V+ + W A++
Sbjct: 126 GLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI----VDRSLISWNAMI- 180
Query: 420 ASHVH 424
A VH
Sbjct: 181 AGFVH 185
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 335 bits (859), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 206/613 (33%), Positives = 314/613 (51%), Gaps = 49/613 (7%)
Query: 14 SILNTCTT---LRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
S L C T + + LH + L + II N L + + + S R + Q
Sbjct: 350 SALAACFTPDFFEKGRILHGLVVVSGLFYNQ-IIGNAL---VSMYGKIGEMSESRRVLLQ 405
Query: 71 VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV----TNLTL 126
+P + ++ALI Y +AL + +MR + ++ T ++ SA L
Sbjct: 406 MPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER 465
Query: 127 GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYAR 186
G LHA+ + GF SD V N+ LIT YA+
Sbjct: 466 GKPLHAYIVSAGFESDEHVKNS-------------------------------LITMYAK 494
Query: 187 NGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGA 246
GD++S+++LF+ LD ++ + W AM+ A + +E L+ +R G+ D+ + +
Sbjct: 495 CGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEG 554
Query: 247 ISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER 306
+SA A+L ++ + +A GF + + +A DMYSKCG + E + R
Sbjct: 555 LSAAAKLAVLEEGQQLHGLAVKLGF--EHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNR 612
Query: 307 NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLF 366
+ +++ +I HG F+EMLE IKP HVTFV +L AC+H GLVD+G +
Sbjct: 613 SLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYY 672
Query: 367 SNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGN 426
+ +G+ P+ +H C+ DLLGR+G L +A + MP++PN VW +LL + +HGN
Sbjct: 673 DMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGN 732
Query: 427 PDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVE 486
D + +L +LEP + Y+L SN +A+ GRW+DV VRK M KN+KK SWV+
Sbjct: 733 LDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVK 792
Query: 487 SRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFLLMA 546
++ V F GD HP+ EI L+D+ + +K GY+ + S D +++K L
Sbjct: 793 LKDKV-SSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWN 851
Query: 547 HSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFLN 606
HSE+LALA+ L++T GST++I KNLRIC DCH V S+V GR+IV+RD RFHHF
Sbjct: 852 HSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFER 911
Query: 607 GACSCG----DFW 615
G G FW
Sbjct: 912 GLFGKGSGFQQFW 924
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 182/431 (42%), Gaps = 56/431 (12%)
Query: 12 VVSILNTC----TTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLL 67
+ S++ C + R Q+H + + L Y+ T +L HL + + S R +
Sbjct: 44 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAIL-HLYGVYG---LVSCSRKV 99
Query: 68 FSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTNL 124
F ++P N +++L+ Y+ +G E + +Y MR + + + S + S+ + +
Sbjct: 100 FEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDE 159
Query: 125 TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAY 184
+LG Q+ + G S + V N++I M
Sbjct: 160 SLGRQIIGQVVKSGLESKLAVENSLISML------------------------------- 188
Query: 185 ARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLA 244
G+++ A +FD++ +D ++W ++ YAQN +E+ F +R E + T++
Sbjct: 189 GSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVS 248
Query: 245 GAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK 304
+S + K + + GF V V + L+ MY+ G EA VF+ M
Sbjct: 249 TLLSVLGHVDHQKWGRGIHGLVVKMGFDSV--VCVCNTLLRMYAGAGRSVEANLVFKQMP 306
Query: 305 ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQY 364
++ +++S++ F GR+ A+ L M+ + N+VTF L AC ++G+
Sbjct: 307 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 366
Query: 365 LFSNMEGCYGVVPSADHY-----ACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLG 419
L VV S Y + + G+ G + ++ +++ MP + W AL+G
Sbjct: 367 LHGL------VVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIG 419
Query: 420 ASHVHGNPDVA 430
+PD A
Sbjct: 420 GYAEDEDPDKA 430
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 187/430 (43%), Gaps = 49/430 (11%)
Query: 15 ILNTCTTLRR---AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
++++C L+ +Q+ + + L +S + N L + + ++ Y +F Q+
Sbjct: 149 VISSCGLLKDESLGRQIIGQVVKSGL-ESKLAVENSLISMLGSMGNV---DYANYIFDQM 204
Query: 72 PSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTNLTLGT 128
+ ++++ AY G E+ R+++ MR S T S L S V + G
Sbjct: 205 SERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGR 264
Query: 129 QLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNG 188
+H + +GF S + V NT+++MY +G A VF +MP +D++SW L+ ++ +G
Sbjct: 265 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG 324
Query: 189 DMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAIS 248
R L +AL + +G + VT A++
Sbjct: 325 -----RSL--------------------------DALGLLCSMISSGKSVNYVTFTSALA 353
Query: 249 ACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNA 308
AC + + + SG N ++G+ALV MY K G + E+ V M R+
Sbjct: 354 ACFTPDFFEKGRILHGLVVVSGL--FYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDV 411
Query: 309 FTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAG-LVDQGQYLFS 367
++++I G+A A+ F M + N++T V VL AC G L+++G+ L +
Sbjct: 412 VAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHA 471
Query: 368 NMEGCYGVVPSADHYA-CMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGN 426
+ S +H + + + G L + L + N W A+L A+ HG+
Sbjct: 472 YI--VSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGH 528
Query: 427 -PDVAEIVSR 435
+V ++VS+
Sbjct: 529 GEEVLKLVSK 538
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 169/367 (46%), Gaps = 45/367 (12%)
Query: 66 LLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSM--RNQRITPISFTFSALFSAVTN 123
L+F Q+P+ + +++L+ ++ G +AL L SM + + ++FT SAL + T
Sbjct: 300 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFT-SALAACFTP 358
Query: 124 --LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
G LH ++ G + + N ++ MY
Sbjct: 359 DFFEKGRILHGLVVVSGLFYNQIIGNALVSMY---------------------------- 390
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
+ G+M+ +R + ++ +D VAW A++ GYA++ P +AL F+ +R G+ ++ +
Sbjct: 391 ---GKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYI 447
Query: 242 TLAGAISACAQLG-ASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
T+ +SAC G + + S+GF + V ++L+ MY+KCG++ + ++F
Sbjct: 448 TVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEH--VKNSLITMYAKCGDLSSSQDLF 505
Query: 301 RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVD 360
G+ RN T+++M+ A HG +KL +M + + +F L A +++
Sbjct: 506 NGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLE 565
Query: 361 QGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAV--WGALL 418
+GQ L + G + + AD+ + G + ++V+ +P N ++ W L+
Sbjct: 566 EGQQL-HGLAVKLGFEHDSFIFNAAADMYSKCGEIG---EVVKMLPPSVNRSLPSWNILI 621
Query: 419 GASHVHG 425
A HG
Sbjct: 622 SALGRHG 628
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 158/361 (43%), Gaps = 53/361 (14%)
Query: 71 VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV----TNLTL 126
+P N ++ ++ G + E + + M + I P SF ++L +A +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 127 GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYAR 186
G Q+H G SD++V+ ++ +Y G + +RKVF+EMP R+VVSWT L+ Y+
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 187 NGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGA 246
G+ P+E ++ ++ +R G+ +E +++
Sbjct: 121 KGE-------------------------------PEEVIDIYKGMRGEGVGCNENSMSLV 149
Query: 247 ISACAQLGASKDADWVR-CIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE 305
IS+C L KD R I + G + V ++L+ M GNV+ A +F M E
Sbjct: 150 ISSCGLL---KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE 206
Query: 306 RNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYL 365
R+ +++S+ +A +G + ++F M + N T +L H VD ++
Sbjct: 207 RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH---VDHQKW- 262
Query: 366 FSNMEGCYGVVPSA--DHYACMADLLGR----AGHLEKALQLVETMPVEPNGAVWGALLG 419
G +G+V D C+ + L R AG +A + + MP + + W +L+
Sbjct: 263 ---GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMA 318
Query: 420 A 420
+
Sbjct: 319 S 319
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 334 bits (856), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 161/437 (36%), Positives = 268/437 (61%), Gaps = 7/437 (1%)
Query: 180 LITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFR-CLREAGMET 238
+I + + G+ A+++ ++ + W M+ GY +N +EAL+ + L ++
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 239 DEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYN 298
++ + A +++ACA+LG A WV + SG N ++ SALVD+Y+KCG++ +
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGI--ELNAILSSALVDVYAKCGDIGTSRE 221
Query: 299 VFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGL 358
VF +K + +++MI GFA HG A AI++F EM + P+ +TF+G+L C+H GL
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 359 VDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALL 418
+++G+ F M + + P +HY M DLLGRAG +++A +L+E+MP+EP+ +W +LL
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 419 GASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKK 478
+S + NP++ EI ++L + + G+Y+LLSN Y+S +W+ +VR+LM + ++K
Sbjct: 342 SSSRTYKNPELGEIAIQNLSKAKS---GDYVLLSNIYSSTKKWESAQKVRELMSKEGIRK 398
Query: 479 NPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDK 538
G SW+E G+IH F AGD H E I K L+ L+++ K+ G++ + V D+ ++
Sbjct: 399 AKGKSWLEF-GGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEE 457
Query: 539 EKRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDN 598
EK L HSEKLALA+ +L + G+ I+I KN+R+C DCH + SK+ R I++RD
Sbjct: 458 EKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDR 517
Query: 599 MRFHHFLNGACSCGDFW 615
+RFH F +G CSC D+W
Sbjct: 518 IRFHRFEDGLCSCRDYW 534
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 102/236 (43%), Gaps = 42/236 (17%)
Query: 75 NPFLYSALIRAYTLRGPFTEALRLYTSMRN-QRITPISFTFSALFSAVTNLTLGTQLHA- 132
N ++ +I Y + EAL+ +M + I P F+F++ +A L G HA
Sbjct: 128 NVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARL--GDLHHAK 185
Query: 133 --HALLL--GFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNG 188
H+L++ G + +++ ++ +Y K G + ++R+VF + + DV W +IT +A +G
Sbjct: 186 WVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHG 245
Query: 189 DMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAIS 248
A +F E++ A++ P D +T G ++
Sbjct: 246 LATEAIRVFSEME--------------AEHVSP-----------------DSITFLGLLT 274
Query: 249 ACAQLGASKDA-DWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
C+ G ++ ++ ++ P A+VD+ + G V+EAY + M
Sbjct: 275 TCSHCGLLEEGKEYFGLMSRRFSIQPKLEHY--GAMVDLLGRAGRVKEAYELIESM 328
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 183/516 (35%), Positives = 298/516 (57%), Gaps = 17/516 (3%)
Query: 12 VVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
+ ++++ L KQ+ + + L S ++ LLR T +L SY R +F +
Sbjct: 27 ISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNL---SYARFIFDRF 83
Query: 72 PSPNPFLYSALIRAYTLRGPF--TEALRLYTSMRNQRIT-PISFTFSALFSAVTNLT--L 126
PN LY+A++ AY+ P + A + M N+ + P F + + + L+
Sbjct: 84 SFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAF 143
Query: 127 GTQL-HAHALLLGFASDIFVNNTMIKMYVKS-GCLDSARKVFDEMPQRDVVSWTELITAY 184
T L H H GF + V ++ Y S + AR++FDEM +R+VVSWT +++ Y
Sbjct: 144 STPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGY 203
Query: 185 ARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFR-CLREAGMETDEVTL 243
AR+GD+++A LF+++ +D +W A++ QN + EA+ FR + E + +EVT+
Sbjct: 204 ARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTV 263
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
+SACAQ G + A + A + +V V ++LVD+Y KCGN+EEA +VF+
Sbjct: 264 VCVLSACAQTGTLQLAKGIHAFAYRRDL--SSDVFVSNSLVDLYGKCGNLEEASSVFKMA 321
Query: 304 KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLE---TEIKPNHVTFVGVLVACTHAGLVD 360
+++ ++SMI FA+HGR+ AI +F EM++ +IKP+H+TF+G+L ACTH GLV
Sbjct: 322 SKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVS 381
Query: 361 QGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGA 420
+G+ F M +G+ P +HY C+ DLLGRAG ++AL+++ TM ++ + A+WG+LL A
Sbjct: 382 KGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNA 441
Query: 421 SHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNP 480
+HG+ D+AE+ ++L L PNN G +++N Y G W++ R RK+++ +N K P
Sbjct: 442 CKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPP 501
Query: 481 GYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLL 516
G+S +E N V H+F + D HPE EI LD L+
Sbjct: 502 GWSRIEIDNEV-HQFYSLDKSHPETEEIYMILDSLI 536
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 326 bits (835), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 166/482 (34%), Positives = 277/482 (57%), Gaps = 9/482 (1%)
Query: 8 LEWQVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLL 67
+E +++ +L+ T R ++HAH+ RH LH S+ LL H + L Y +
Sbjct: 3 IERKLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNL----LLAHFISICGSLSNSDYANRV 58
Query: 68 FSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALF---SAVTNL 124
FS + +PN +++A+I+ Y+L GP E+L ++SM+++ I +T++ L S++++L
Sbjct: 59 FSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDL 118
Query: 125 TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAY 184
G +H + GF + ++++Y G + A+KVFDEM +R+VV W +I +
Sbjct: 119 RFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGF 178
Query: 185 ARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLA 244
+GD+ LF ++ + V+W +M++ ++ +EALE F + + G + DE T+
Sbjct: 179 CDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVV 238
Query: 245 GAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK 304
+ A LG W+ AESSG + VG+ALVD Y K G++E A +FR M+
Sbjct: 239 TVLPISASLGVLDTGKWIHSTAESSGLFKDF-ITVGNALVDFYCKSGDLEAATAIFRKMQ 297
Query: 305 ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLET-EIKPNHVTFVGVLVACTHAGLVDQGQ 363
RN +++++I G A++G+ I LF M+E ++ PN TF+GVL C++ G V++G+
Sbjct: 298 RRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGE 357
Query: 364 YLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHV 423
LF M + + +HY M DL+ R+G + +A + ++ MPV N A+WG+LL A
Sbjct: 358 ELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRS 417
Query: 424 HGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYS 483
HG+ +AE+ + L ++EP N GNY+LLSN YA GRW DV +VR LM+ L+K+ G S
Sbjct: 418 HGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQS 477
Query: 484 WV 485
+
Sbjct: 478 TI 479
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 324 bits (831), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 187/559 (33%), Positives = 295/559 (52%), Gaps = 43/559 (7%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL 124
R LF ++P N + Y ++I + G + EA L+ M + + TF+ + A L
Sbjct: 178 RRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGL 237
Query: 125 T---LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
+G QLH AL LG + FV+ +I MY K G
Sbjct: 238 GSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCG------------------------ 273
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
D+ AR F+ + K VAW ++ GYA + +EAL +R++G+ D+
Sbjct: 274 -------DIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQF 326
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
TL+ I +L + +GF ++ +ALVD YSK G V+ A VF
Sbjct: 327 TLSIMIRISTKLAKLELTKQAHASLIRNGF--ESEIVANTALVDFYSKWGRVDTARYVFD 384
Query: 302 GMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
+ +N ++++++ G+A HGR A+KLF +M+ + PNHVTF+ VL AC ++GL +Q
Sbjct: 385 KLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQ 444
Query: 362 GQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGAS 421
G +F +M +G+ P A HYACM +LLGR G L++A+ + P++ +W ALL A
Sbjct: 445 GWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNAC 504
Query: 422 HVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPG 481
+ N ++ +V+ L+ + P +GNY+++ N Y S G+ + + V + + K L P
Sbjct: 505 RMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPA 564
Query: 482 YSWVESRNGVIHEFLAGDVKHPEINE-----IKKALDDLLERLKAIGYLPNLSSVPYDIG 536
+WVE + H FL+GD + NE I + +D+L+E + GY + D+
Sbjct: 565 CTWVEVGDQT-HSFLSGD-RFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVD 622
Query: 537 DKEKRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVR 596
+KE+ + HSEKLA+A+GL+NT + ++I +N RIC++CH V+ S VTGR++VVR
Sbjct: 623 EKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVR 682
Query: 597 DNMRFHHFLNGACSCGDFW 615
D RFHHF G CSCG +W
Sbjct: 683 DASRFHHFKEGKCSCGGYW 701
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 165/378 (43%), Gaps = 45/378 (11%)
Query: 83 IRAYTLRGPFTEALRLYT--SMRNQRITPISFTFSALFSAVTNLT---LGTQLHAHALLL 137
I L F EA L+ +R +S T+ AL A L +++ +
Sbjct: 94 IEKLVLCNRFREAFELFEILEIRCSFKVGVS-TYDALVEACIRLKSIRCVKRVYGFMMSN 152
Query: 138 GFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELF 197
GF + ++ N ++ M+VK G + AR++FDE+P+R++ S+ +I+ + G+ A ELF
Sbjct: 153 GFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELF 212
Query: 198 DELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASK 257
K+ W + + ET T A + A A LG+
Sbjct: 213 -------KMMWEEL----------------------SDCETH--TFAVMLRASAGLGSIY 241
Query: 258 DADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVG 317
+ A G N V L+DMYSKCG++E+A F M E+ ++++I G
Sbjct: 242 VGKQLHVCALK--LGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAG 299
Query: 318 FAIHGRARAAIKLFYEMLETEIKPNHVTF-VGVLVACTHAGLVDQGQYLFSNMEGCYGVV 376
+A+HG + A+ L Y+M ++ + + T + + ++ A L Q S + +
Sbjct: 300 YALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESE 359
Query: 377 PSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHG-NPDVAEIVSR 435
A+ + D + G ++ A + + +P N W AL+G HG D ++ +
Sbjct: 360 IVAN--TALVDFYSKWGRVDTARYVFDKLP-RKNIISWNALMGGYANHGRGTDAVKLFEK 416
Query: 436 HL-FELEPNNIGNYLLLS 452
+ + PN++ +LS
Sbjct: 417 MIAANVAPNHVTFLAVLS 434
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 323 bits (829), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 190/608 (31%), Positives = 321/608 (52%), Gaps = 47/608 (7%)
Query: 12 VVSILNTCTTL---RRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLF 68
+ S+++ C L R + +HA++ + + ++ LT + + LF
Sbjct: 300 LTSVISACELLGDRRLGRDIHAYV----ITTGFAVDISVCNSLTQMYLNAGSWREAEKLF 355
Query: 69 SQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT---NLT 125
S++ + ++ +I Y +A+ Y M + P T +A+ SA +L
Sbjct: 356 SRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLD 415
Query: 126 LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYA 185
G +LH A+ S + V N +I MY K C+D A +F +P+
Sbjct: 416 TGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPR-------------- 461
Query: 186 RNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
K+ ++WT+++ G N EAL F R ++ ++ + +TL
Sbjct: 462 -----------------KNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTA 503
Query: 246 AISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE 305
A++ACA++GA + +G G + + +AL+DMY +CG + A++ F K
Sbjct: 504 ALAACARIGALMCGKEIHAHVLRTGVGL--DDFLPNALLDMYVRCGRMNTAWSQFNSQK- 560
Query: 306 RNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYL 365
++ +++ ++ G++ G+ ++LF M+++ ++P+ +TF+ +L C+ + +V QG
Sbjct: 561 KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMY 620
Query: 366 FSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHG 425
FS ME YGV P+ HYAC+ DLLGRAG L++A + ++ MPV P+ AVWGALL A +H
Sbjct: 621 FSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHH 679
Query: 426 NPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWV 485
D+ E+ ++H+FEL+ ++G Y+LL N YA G+W +V++VR++M++ L + G SWV
Sbjct: 680 KIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWV 739
Query: 486 ESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFLLM 545
E + G +H FL+ D HP+ EI L+ E++ +G S D + + +
Sbjct: 740 EVK-GKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFC 798
Query: 546 AHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFL 605
HSE+ A+AFGL+NT G I + KNL +CE+CH + SK R+I VRD FHHF
Sbjct: 799 GHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFK 858
Query: 606 NGACSCGD 613
+G CSCGD
Sbjct: 859 DGECSCGD 866
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 192/448 (42%), Gaps = 48/448 (10%)
Query: 5 RRALEWQVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYP 64
R A++ V L +RA++ + +Y L S + L F
Sbjct: 89 RVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDA 148
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMR-NQRITPISFTFSALF---SA 120
+F ++ N F ++ L+ Y +G F EA+ LY M + P +TF +
Sbjct: 149 WYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGG 208
Query: 121 VTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTEL 180
+ +L G ++H H + G+ DI V N +I MYVK
Sbjct: 209 IPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKC------------------------ 244
Query: 181 ITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
GD+ SAR LFD + +D ++W AM++GY +N M E LE F +R ++ D
Sbjct: 245 -------GDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDL 297
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
+TL ISAC LG + + ++GF A ++ V ++L MY G+ EA +F
Sbjct: 298 MTLTSVISACELLGDRRLGRDIHAYVITTGF--AVDISVCNSLTQMYLNAGSWREAEKLF 355
Query: 301 RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVD 360
M+ ++ ++++MI G+ + AI + M + +KP+ +T VL AC G +D
Sbjct: 356 SRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLD 415
Query: 361 QGQYLFSNMEGCYGVVPSADHYACMA----DLLGRAGHLEKALQLVETMPVEPNGAVWGA 416
G L + Y +A ++ + ++KAL + +P N W +
Sbjct: 416 TGVELHK-----LAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTS 469
Query: 417 LLGASHVHGNPDVAEIVSRHL-FELEPN 443
++ ++ A I R + L+PN
Sbjct: 470 IIAGLRLNNRCFEALIFLRQMKMTLQPN 497
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 5/213 (2%)
Query: 214 GYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGP 273
G N +EA++ ++E + DE + C A ++ V IA SS
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSM--S 125
Query: 274 ARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYE 333
+ V +G+A + M+ + GN+ +A+ VF M ERN F+++ ++ G+A G A+ L++
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 334 MLET-EIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRA 392
ML +KP+ TF VL C + +G+ + ++ YG D + + +
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVR-YGYELDIDVVNALITMYVKC 244
Query: 393 GHLEKALQLVETMPVEPNGAVWGALLGASHVHG 425
G ++ A L + MP + W A++ +G
Sbjct: 245 GDVKSARLLFDRMP-RRDIISWNAMISGYFENG 276
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 175/520 (33%), Positives = 286/520 (55%), Gaps = 54/520 (10%)
Query: 22 LRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSA 81
L KQ+H +I RH++ ++ + L+ + S + +FSQ S + +++A
Sbjct: 356 LEYCKQIHCYIMRHSISLDIFLTSALI----DAYFKCRGVSMAQNIFSQCNSVDVVVFTA 411
Query: 82 LIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV---TNLTLGTQLHAHALLLG 138
+I Y G + ++L ++ + +I+P T ++ + L LG +LH + G
Sbjct: 412 MISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKG 471
Query: 139 FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFD 198
F + + +I MY A+ G MN A E+F+
Sbjct: 472 FDNRCNIGCAVIDMY-------------------------------AKCGRMNLAYEIFE 500
Query: 199 ELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKD 258
L +D V+W +M+T AQ+ P A++ FR + +G+ D V+++ A+SACA L +
Sbjct: 501 RLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESF 560
Query: 259 ADWVRCIAESSGF----GPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSM 314
+ GF A +V S L+DMY+KCGN++ A NVF+ MKE+N +++S+
Sbjct: 561 GKAIH------GFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSI 614
Query: 315 IVGFAIHGRARAAIKLFYEMLETE-IKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCY 373
I HG+ + ++ LF+EM+E I+P+ +TF+ ++ +C H G VD+G F +M Y
Sbjct: 615 IAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDY 674
Query: 374 GVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIV 433
G+ P +HYAC+ DL GRAG L +A + V++MP P+ VWG LLGA +H N ++AE+
Sbjct: 675 GIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVA 734
Query: 434 SRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIH 493
S L +L+P+N G Y+L+SN +A+A W+ V++VR LM+++ ++K PGYSW+E N H
Sbjct: 735 SSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEI-NKRTH 793
Query: 494 EFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPY 533
F++GDV HPE + I L+ LL L+ GY+P PY
Sbjct: 794 LFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQ----PY 829
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 165/388 (42%), Gaps = 60/388 (15%)
Query: 64 PRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN 123
P LF +V + +++ ++ Y G ++ ++ MR +I+P + TF + S +
Sbjct: 192 PSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCAS 251
Query: 124 ---LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTEL 180
+ LG QLH ++ G + + N+++ MY K G D
Sbjct: 252 KLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDD------------------- 292
Query: 181 ITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
A +LF + D V W M++GY Q+ + +E+L FF + +G+ D
Sbjct: 293 ------------ASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
+T + + + ++ + + C + ++ + SAL+D Y KC V A N+F
Sbjct: 341 ITFSSLLPSVSKFENLEYCKQIHCYIMRHSI--SLDIFLTSALIDAYFKCRGVSMAQNIF 398
Query: 301 RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFV------GVLVACT 354
+ +++MI G+ +G ++++F +++ +I PN +T V G+L+A
Sbjct: 399 SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALK 458
Query: 355 -----HAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEP 409
H ++ +G N+ GC + D+ + G + A ++ E + +
Sbjct: 459 LGRELHGFIIKKGFDNRCNI-GC-----------AVIDMYAKCGRMNLAYEIFERLS-KR 505
Query: 410 NGAVWGALLGASHVHGNPDVAEIVSRHL 437
+ W +++ NP A + R +
Sbjct: 506 DIVSWNSMITRCAQSDNPSAAIDIFRQM 533
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 149/366 (40%), Gaps = 55/366 (15%)
Query: 15 ILNTCTT---LRRAKQLHAHIYRHNLHQSSYIITNLL--RHLTTTFPHLPIHSYPRLLFS 69
+L C+ LR+ KQ+HA + +++ SY +L + +F Y L
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 70 QVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQ 129
P ++++I ++ G +AL Y M ++P TF L A L
Sbjct: 101 SSIRP----WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALK---- 152
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGD 189
F F+++T V S +D V + LI AY G
Sbjct: 153 --------NFKGIDFLSDT-----VSSLGMDCNEFV-----------ASSLIKAYLEYGK 188
Query: 190 MNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISA 249
++ +LFD + KD V W M+ GYA+ ++ F +R + + VT +S
Sbjct: 189 IDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSV 248
Query: 250 CAQLGASKDADWVRCIAESSGF---GPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER 306
CA + + SG G +N +L+ MYSKCG ++A +FR M
Sbjct: 249 CASKLLIDLGVQLHGLVVVSGVDFEGSIKN-----SLLSMYSKCGRFDDASKLFRMMSRA 303
Query: 307 NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLF 366
+ T++ MI G+ G ++ FYEM+ + + P+ +TF +L + + F
Sbjct: 304 DTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSK----------F 353
Query: 367 SNMEGC 372
N+E C
Sbjct: 354 ENLEYC 359
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 316 bits (809), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 175/495 (35%), Positives = 273/495 (55%), Gaps = 27/495 (5%)
Query: 15 ILNTCTTLRRAKQLHAHIYRH----NLHQSSYIITNLLRHLTTTFPHLP----IHSYPRL 66
+L C TL+ Q HA N + + + N+L +T+ P + SY
Sbjct: 10 LLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATS 69
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFT-EALRLYTSMRNQRITPISFTFSALFSAVT--- 122
+F + +P+ F ++ +IR TL P + + R + MR + + P TF +F A
Sbjct: 70 VFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKK 129
Query: 123 --NLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTEL 180
+LTL LH AL G SD+F NT+I++Y +DSA ++FDE PQRDVV++ L
Sbjct: 130 NGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVL 189
Query: 181 ITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
I + ++ ARELFD + ++D V+W ++++GYAQ +EA++ F + G++ D
Sbjct: 190 IDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDN 249
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPAR---NVLVGSALVDMYSKCGNVEEAY 297
V + +SACAQ G DW + A R + + + LVD Y+KCG ++ A
Sbjct: 250 VAIVSTLSACAQSG-----DWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAM 304
Query: 298 NVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAG 357
+F ++ FT+++MI G A+HG + F +M+ + IKP+ VTF+ VLV C+H+G
Sbjct: 305 EIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSG 364
Query: 358 LVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNG----AV 413
LVD+ + LF M Y V HY CMADLLGRAG +E+A +++E MP +
Sbjct: 365 LVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLA 424
Query: 414 WGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLM-R 472
W LLG +HGN ++AE + + L P + G Y ++ YA+A RW++V +VR+++ R
Sbjct: 425 WSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDR 484
Query: 473 DKNLKKNPGYSWVES 487
DK +KKN G+S V S
Sbjct: 485 DKKVKKNVGFSKVLS 499
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 316 bits (809), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 175/471 (37%), Positives = 271/471 (57%), Gaps = 11/471 (2%)
Query: 61 HSYPRLL-FSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFS 119
H+ P++ +Q S +++ I T G EA + ++ M + P TF AL S
Sbjct: 20 HANPKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLS 79
Query: 120 AVTNLT-----LGTQLHAHALLLGFASD-IFVNNTMIKMYVKSGCLDSARKVFDEMPQRD 173
+ T LG LH +A LG + + V +I MY K G AR VFD M ++
Sbjct: 80 GCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKN 139
Query: 174 VVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLRE 233
V+W +I Y R+G +++A ++FD++ +D ++WTAM+ G+ + +EAL +FR ++
Sbjct: 140 SVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQI 199
Query: 234 AGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNV 293
+G++ D V + A++AC LGA WV S F NV V ++L+D+Y +CG V
Sbjct: 200 SGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDF--KNNVRVSNSLIDLYCRCGCV 257
Query: 294 EEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVAC 353
E A VF M++R +++S+IVGFA +G A ++ F +M E KP+ VTF G L AC
Sbjct: 258 EFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTAC 317
Query: 354 THAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAV 413
+H GLV++G F M+ Y + P +HY C+ DL RAG LE AL+LV++MP++PN V
Sbjct: 318 SHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVV 377
Query: 414 WGALLGASHVHGNPDV-AEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMR 472
G+LL A HGN V AE + +HL +L + NY++LSN YA+ G+W+ S++R+ M+
Sbjct: 378 IGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMK 437
Query: 473 DKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIG 523
LKK PG+S +E + +H F+AGD H E I++ L+ + L+ G
Sbjct: 438 GLGLKKQPGFSSIEI-DDCMHVFMAGDNAHVETTYIREVLELISSDLRLQG 487
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 189/615 (30%), Positives = 316/615 (51%), Gaps = 51/615 (8%)
Query: 10 WQVVSILNTCTTL---RRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRL 66
+ +S L C+ + + K++H H R + ++ + + + + + SY
Sbjct: 232 FSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEV---SYAER 288
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQR-ITPISFTFSALFSAVTNLT 125
+F+ + N ++ +I Y G T+A + M Q + P T L A L
Sbjct: 289 IFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE 348
Query: 126 LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYA 185
G +H +A+ GF +P +V T LI Y
Sbjct: 349 -GRTIHGYAMRRGF-----------------------------LPH--MVLETALIDMYG 376
Query: 186 RNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
G + SA +FD + K+ ++W +++ Y QN ALE F+ L ++ + D T+A
Sbjct: 377 ECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIAS 436
Query: 246 AISACAQ-LGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK 304
+ A A+ L S+ + I +S + N ++ ++LV MY+ CG++E+A F +
Sbjct: 437 ILPAYAESLSLSEGREIHAYIVKSRYWS---NTIILNSLVHMYAMCGDLEDARKCFNHIL 493
Query: 305 ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQY 364
++ +++S+I+ +A+HG R ++ LF EM+ + + PN TF +L AC+ +G+VD+G
Sbjct: 494 LKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWE 553
Query: 365 LFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVH 424
F +M+ YG+ P +HY CM DL+GR G+ A + +E MP P +WG+LL AS H
Sbjct: 554 YFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNH 613
Query: 425 GNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSW 484
+ +AE + +F++E +N G Y+LL N YA AGRW+DV+R++ LM K + + S
Sbjct: 614 KDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRST 673
Query: 485 VESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIG----YLPNLSSVPYDIGDKEK 540
VE++ G H F GD H N+I + L D++ R+ +G Y+ +S + + K +
Sbjct: 674 VEAK-GKSHVFTNGDRSHVATNKIYEVL-DVVSRM--VGEEDIYVHCVSRLRPETLVKSR 729
Query: 541 RFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMR 600
HS +LA FGL++T+ G + + N RIC CH + AS++T R+IVV D+
Sbjct: 730 SNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKI 789
Query: 601 FHHFLNGACSCGDFW 615
FHHF NG CSCG++W
Sbjct: 790 FHHFSNGRCSCGNYW 804
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 176/358 (49%), Gaps = 42/358 (11%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV---TN 123
LF ++ + FL++ +I+ +T G + EA++ Y+ M + +FT+ + +V ++
Sbjct: 86 LFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISS 145
Query: 124 LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
L G ++HA + LGF SD++V N++I +Y+K GC A KVF+EMP+RD+VSW +I+
Sbjct: 146 LEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISG 205
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
Y GD S+ LF E+ +C G + D +
Sbjct: 206 YLALGDGFSSLMLFKEM---------------------------LKC----GFKPDRFST 234
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
A+ AC+ + + K + C A S +V+V ++++DMYSK G V A +F GM
Sbjct: 235 MSALGACSHVYSPKMGKEIHCHAVRSRIETG-DVMVMTSILDMYSKYGEVSYAERIFNGM 293
Query: 304 KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETE-IKPNHVTFVGVLVACTHAGLVDQG 362
+RN ++ MI +A +GR A F +M E ++P+ +T + +L A + +G
Sbjct: 294 IQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEG 349
Query: 363 QYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGA 420
+ + G +P + D+ G G L+ A + + M E N W +++ A
Sbjct: 350 RTIHGYAMR-RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMA-EKNVISWNSIIAA 405
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 134/291 (46%), Gaps = 16/291 (5%)
Query: 178 TELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGME 237
T + +A + M A +LFDE++ D W M+ G+ + EA++F+ + AG++
Sbjct: 68 TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127
Query: 238 TDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAY 297
D T I + A + + ++ + + GF +V V ++L+ +Y K G +A
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGF--VSDVYVCNSLISLYMKLGCAWDAE 185
Query: 298 NVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAG 357
VF M ER+ +++SMI G+ G +++ LF EML+ KP+ + + L AC+H
Sbjct: 186 KVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVY 245
Query: 358 LVDQGQYLFSNMEGCYGVVPSADHYACMA-----DLLGRAGHLEKALQLVETMPVEPNGA 412
G+ + C+ V + M D+ + G + A ++ M ++ N
Sbjct: 246 SPKMGKEIH-----CHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIV 299
Query: 413 VWGALLGASHVHGNPDVAEIVSRHLFE---LEPNNIGNYLLLSNTYASAGR 460
W ++G +G A + + + E L+P+ I + LL + GR
Sbjct: 300 AWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGR 350
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 151/375 (40%), Positives = 231/375 (61%), Gaps = 3/375 (0%)
Query: 142 DIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELD 201
DI + NTMI Y++ G + AR +FD+MP RDV+SW ++ YA GDM + +FD++
Sbjct: 89 DIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMP 148
Query: 202 VKDKVAWTAMVTGYAQNAMPKEAL-EFFRCLREAGMETDEVTLAGAISACAQLGASKDAD 260
++ +W ++ GYAQN E L F R + E + ++ T+ +SACA+LGA
Sbjct: 149 ERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGK 208
Query: 261 WVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAI 320
WV E+ G+ +V V +AL+DMY KCG +E A VF+G+K R+ ++++MI G A
Sbjct: 209 WVHKYGETLGYNKV-DVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAA 267
Query: 321 HGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSAD 380
HG A+ LF+EM + I P+ VTFVGVL AC H GLV+ G F++M + ++P +
Sbjct: 268 HGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIE 327
Query: 381 HYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFEL 440
H C+ DLL RAG L +A++ + MPV+ + +W LLGAS V+ D+ E+ L +L
Sbjct: 328 HCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKL 387
Query: 441 EPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDV 500
EP N N+++LSN Y AGR+DD +R++ MRD KK G SW+E+ +G++ + +G+
Sbjct: 388 EPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGE- 446
Query: 501 KHPEINEIKKALDDL 515
KHP E+++ L +L
Sbjct: 447 KHPRTEELQRILREL 461
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 118/272 (43%), Gaps = 45/272 (16%)
Query: 157 GCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYA 216
G + SA KVF EM +++VV WT +I Y N D+ SAR FD +D V W M++GY
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYI 101
Query: 217 QNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARN 276
+ EA F + P R+
Sbjct: 102 EMGNMLEARSLFDQM-----------------------------------------PCRD 120
Query: 277 VLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEML- 335
V+ + +++ Y+ G++E VF M ERN F+++ +I G+A +GR + F M+
Sbjct: 121 VMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVD 180
Query: 336 ETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHL 395
E + PN T VL AC G D G+++ E + + D+ G+ G +
Sbjct: 181 EGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAI 240
Query: 396 EKALQLVETMPVEPNGAVWGALLG--ASHVHG 425
E A+++ + + + W ++ A+H HG
Sbjct: 241 EIAMEVFKGIK-RRDLISWNTMINGLAAHGHG 271
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 311 bits (798), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 177/511 (34%), Positives = 291/511 (56%), Gaps = 22/511 (4%)
Query: 15 ILNTCTTLRR---AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
+L + LR+ +++H + + L SY+ +N L + + + I +F ++
Sbjct: 52 VLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYV-SNSLMGMYASLGKIEI---THKVFDEM 107
Query: 72 PSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITP-----ISFTFSALFSAVTNLTL 126
P + ++ LI +Y G F +A+ ++ M + I T SA SA+ NL +
Sbjct: 108 PQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSAC-SALKNLEI 166
Query: 127 GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYAR 186
G +++ ++ F + + N ++ M+ K GCLD AR VFD M ++V WT ++ Y
Sbjct: 167 GERIY-RFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVS 225
Query: 187 NGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGA 246
G ++ AR LF+ VKD V WTAM+ GY Q EALE FRC++ AG+ D L
Sbjct: 226 TGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSL 285
Query: 247 ISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER 306
++ CAQ GA + W+ + + +VG+ALVDMY+KCG +E A VF +KER
Sbjct: 286 LTGCAQTGALEQGKWIHGYINENRVTVDK--VVGTALVDMYAKCGCIETALEVFYEIKER 343
Query: 307 NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLF 366
+ +++S+I G A++G + A+ L+YEM ++ + +TFV VL AC H G V +G+ +F
Sbjct: 344 DTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIF 403
Query: 367 SNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGA---VWGALLGASHV 423
+M + V P ++H +C+ DLL RAG L++A +L++ M E + V+ +LL A+
Sbjct: 404 HSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARN 463
Query: 424 HGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYS 483
+GN +AE V+ L ++E ++ + LL++ YASA RW+DV+ VR+ M+D ++K PG S
Sbjct: 464 YGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCS 523
Query: 484 WVESRNGVIHEFLAGD--VKHPEINEIKKAL 512
+E +GV HEF+ GD + HP+++EI L
Sbjct: 524 SIEI-DGVGHEFIVGDDLLSHPKMDEINSML 553
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 181/396 (45%), Gaps = 77/396 (19%)
Query: 68 FSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL--- 124
S + +P+ +Y+ ++++ FT+ L L+ +R Q + P +FT + ++ L
Sbjct: 3 MSLLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKV 62
Query: 125 TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAY 184
G ++H +A+ G D +V+N+++ MY G ++ KVFDEMPQRDVVSW LI++Y
Sbjct: 63 IEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSY 122
Query: 185 ARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLA 244
NG A +F R +E+ ++ DE T+
Sbjct: 123 VGNGRFEDAIGVFK------------------------------RMSQESNLKFDEGTIV 152
Query: 245 GAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK 304
+SAC+ L K+ + I +V +G+ALVDM+ KCG +++A VF M+
Sbjct: 153 STLSACSAL---KNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMR 209
Query: 305 ERNAFTYSSMIVGFAIHGR---ARA----------------------------AIKLFYE 333
++N ++SM+ G+ GR AR A++LF
Sbjct: 210 DKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRC 269
Query: 334 MLETEIKPNHVTFVGVLVACTHAGLVDQGQ----YLFSNMEGCYGVVPSADHYACMADLL 389
M I+P++ V +L C G ++QG+ Y+ N VV +A + D+
Sbjct: 270 MQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTA-----LVDMY 324
Query: 390 GRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHG 425
+ G +E AL++ + E + A W +L+ ++G
Sbjct: 325 AKCGCIETALEVFYEIK-ERDTASWTSLIYGLAMNG 359
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 311 bits (798), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 173/507 (34%), Positives = 288/507 (56%), Gaps = 13/507 (2%)
Query: 15 ILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSP 74
I C+T+R KQ+HA + + L + + +L + + +Y L+F+++
Sbjct: 31 IDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDM---NYAYLVFTRINHK 87
Query: 75 NPFLYSALIRAYTLRGPFTE-ALRLYTSM--RNQRITPISFTFSALFSAVTNLTL---GT 128
NPF+++ +IR ++ R F E A+ ++ M + + P T+ ++F A L G
Sbjct: 88 NPFVWNTIIRGFS-RSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGR 146
Query: 129 QLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNG 188
QLH + G D F+ NTM+ MYV GCL A ++F M DVV+W +I +A+ G
Sbjct: 147 QLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCG 206
Query: 189 DMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAIS 248
++ A+ LFDE+ ++ V+W +M++G+ +N K+AL+ FR ++E ++ D T+ ++
Sbjct: 207 LIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLN 266
Query: 249 ACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNA 308
ACA LGAS+ W+ + F N +V +AL+DMY KCG +EE NVF ++
Sbjct: 267 ACAYLGASEQGRWIHEYIVRNRF--ELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQL 324
Query: 309 FTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSN 368
++SMI+G A +G A+ LF E+ + ++P+ V+F+GVL AC H+G V + F
Sbjct: 325 SCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRL 384
Query: 369 MEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPD 428
M+ Y + PS HY M ++LG AG LE+A L++ MPVE + +W +LL A GN +
Sbjct: 385 MKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVE 444
Query: 429 VAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESR 488
+A+ ++ L +L+P+ Y+LLSN YAS G +++ R LM+++ ++K G S +E
Sbjct: 445 MAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEV- 503
Query: 489 NGVIHEFLAGDVKHPEINEIKKALDDL 515
+ +HEF++ HP+ EI LD L
Sbjct: 504 DFEVHEFISCGGTHPKSAEIYSLLDIL 530
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 197/652 (30%), Positives = 318/652 (48%), Gaps = 120/652 (18%)
Query: 9 EWQVVSILNTCTTL---RRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPR 65
E+ + S+L CT+L R +Q+H H + ++ LL + S
Sbjct: 125 EYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLL----AMYAQCKRISEAE 180
Query: 66 LLFSQVP-SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL 124
LF + N +++++ Y+ G +A+ + +R + +TF ++ +A ++
Sbjct: 181 YLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASV 240
Query: 125 T---LGTQLHAHALLLGFASDIFVNNTMIKMY---------------------------- 153
+ +G Q+H + GF ++I+V + +I MY
Sbjct: 241 SACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMI 300
Query: 154 ---VKSGCLDSARKVFDEMPQRDV---------------VSWTE---------------- 179
V+ G + A +F M +RD+ +S TE
Sbjct: 301 VGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGY 360
Query: 180 ---------LITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRC 230
L+ YA+ G M+SA ++F+ + KD ++WTA+VTG N EAL+ F
Sbjct: 361 ATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCN 420
Query: 231 LREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKC 290
+R G+ D++ A +SA A+L + V SGF P+ ++ V ++LV MY+KC
Sbjct: 421 MRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGF-PS-SLSVNNSLVTMYTKC 478
Query: 291 GNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVL 350
G++E+A +F M+ R+ T++ +IVG+A +G
Sbjct: 479 GSLEDANVIFNSMEIRDLITWTCLIVGYAKNG---------------------------- 510
Query: 351 VACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPN 410
L++ Q F +M YG+ P +HYACM DL GR+G K QL+ M VEP+
Sbjct: 511 -------LLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPD 563
Query: 411 GAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKL 470
VW A+L AS HGN + E ++ L ELEPNN Y+ LSN Y++AGR D+ + VR+L
Sbjct: 564 ATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRL 623
Query: 471 MRDKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSS 530
M+ +N+ K PG SWVE + G +H F++ D +HP + EI +D+++ +K GY ++S
Sbjct: 624 MKSRNISKEPGCSWVEEK-GKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSF 682
Query: 531 VPYDIGDKEKRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVM 582
+D+ + K L HSEKLA+AFGLL +G+ I+I+KNLR+C DCH M
Sbjct: 683 ALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAM 734
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 148/294 (50%), Gaps = 10/294 (3%)
Query: 126 LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYA 185
G+ +H++A S++ + + KSG +D AR++FD+MP+RD +W +I AY+
Sbjct: 16 FGSCIHSYADRTKLHSNLLLGD-----LSKSGRVDEARQMFDKMPERDEFTWNTMIVAYS 70
Query: 186 RNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
+ ++ A +LF VK+ ++W A+++GY ++ EA F ++ G++ +E TL
Sbjct: 71 NSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGS 130
Query: 246 AISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK- 304
+ C L + + +GF NV+ G L+ MY++C + EA +F M+
Sbjct: 131 VLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNG--LLAMYAQCKRISEAEYLFETMEG 188
Query: 305 ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQY 364
E+N T++SM+ G++ +G A AI+ F ++ + N TF VL AC G
Sbjct: 189 EKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQ 248
Query: 365 LFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALL 418
+ + G + + + D+ + +E A L+E M V+ + W +++
Sbjct: 249 VHCCIVKS-GFKTNIYVQSALIDMYAKCREMESARALLEGMEVD-DVVSWNSMI 300
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 309 bits (792), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 181/531 (34%), Positives = 270/531 (50%), Gaps = 74/531 (13%)
Query: 63 YPRLLFSQVPS-PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQR-ITPISFTFSALFSA 120
Y R LF Q P + FL +++I+AY + ++ LY +R + P +FTF+ L +
Sbjct: 28 YARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKS 87
Query: 121 VT---NLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSW 177
+ + G QLH+ GF +D++V+ ++ MY K G + AR FDEMP R VSW
Sbjct: 88 CSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSW 147
Query: 178 TELITAYAR--------------------------------NGDMNSARELFDEL----- 200
T LI+ Y R +GDM SAR LFDE+
Sbjct: 148 TALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTV 207
Query: 201 -----------DVKD---------------KVAWTAMVTGYAQNAMPKEALEFFRCLR-E 233
++KD V+W M+ GY QN P+E + F+ ++
Sbjct: 208 ITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQAT 267
Query: 234 AGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNV 293
++ D+VT+ + A + GA +W C + + V V +A++DMYSKCG +
Sbjct: 268 TSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLD--KKVKVCTAILDMYSKCGEI 325
Query: 294 EEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVAC 353
E+A +F M E+ ++++MI G+A++G ARAA+ LF M+ E KP+ +T + V+ AC
Sbjct: 326 EKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMM-IEEKPDEITMLAVITAC 384
Query: 354 THAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAV 413
H GLV++G+ F M G+ +HY CM DLLGRAG L++A L+ MP EPNG +
Sbjct: 385 NHGGLVEEGRKWFHVMRE-MGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGII 443
Query: 414 WGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRD 473
+ L A + + + AE + + ELEP N GNY+LL N YA+ RWDD V+ +MR
Sbjct: 444 LSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRK 503
Query: 474 KNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGY 524
KK G S +E N ++ EF++GD HP I L DLL + Y
Sbjct: 504 NQAKKEVGCSLIEI-NYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKY 553
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 147/362 (40%), Gaps = 44/362 (12%)
Query: 171 QRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWT-AMVTGYAQNAMPKEALEFFR 229
+ +V +T+ + A + AR+LFD+ +D + +M+ Y + ++ +R
Sbjct: 7 ETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYR 66
Query: 230 CLR-EAGMETDEVTL-----AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSAL 283
LR E D T + ++S C G + R FG ++ V + +
Sbjct: 67 DLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWR-------FGFCADMYVSTGV 119
Query: 284 VDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNH 343
VDMY+K G + A N F M R+ +++++I G+ G A KLF +M + +
Sbjct: 120 VDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVK---DV 176
Query: 344 VTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVE 403
V + ++ +G + + LF M + + M ++ A +L +
Sbjct: 177 VIYNAMMDGFVKSGDMTSARRLFDEMTH-----KTVITWTTMIHGYCNIKDIDAARKLFD 231
Query: 404 TMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHL---FELEPNNIGNYLLL---SNTYA- 456
MP E N W ++G + P + + + L+P+++ +L S+T A
Sbjct: 232 AMP-ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGAL 290
Query: 457 SAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLL 516
S G W RK + DK +K V L K EI + K+ D++
Sbjct: 291 SLGEWCHCFVQRKKL-DKKVK-------------VCTAILDMYSKCGEIEKAKRIFDEMP 336
Query: 517 ER 518
E+
Sbjct: 337 EK 338
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 308 bits (789), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 166/492 (33%), Positives = 267/492 (54%), Gaps = 43/492 (8%)
Query: 27 QLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIRAY 86
Q HAHI + L ++ +L+ +++ + + LF + ++A+I +
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSS----GLFDFASRLFDGAEDKDVVTWTAMIDGF 179
Query: 87 TLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTNLTLGTQLHAHALLLG-FASD 142
G +EA+ + M+ + T ++ A V ++ G +H L G D
Sbjct: 180 VRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCD 239
Query: 143 IFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDV 202
+F+ ++++ MY K C D A+KV FDE+
Sbjct: 240 VFIGSSLVDMYGKCSCYDDAQKV-------------------------------FDEMPS 268
Query: 203 KDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWV 262
++ V WTA++ GY Q+ + + F + ++ + +E TL+ +SACA +GA V
Sbjct: 269 RNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRV 328
Query: 263 RCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHG 322
C + N G+ L+D+Y KCG +EEA VF + E+N +T+++MI GFA HG
Sbjct: 329 HCYMIKNSI--EINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHG 386
Query: 323 RARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHY 382
AR A LFY ML + + PN VTF+ VL AC H GLV++G+ LF +M+G + + P ADHY
Sbjct: 387 YARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHY 446
Query: 383 ACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEP 442
ACM DL GR G LE+A L+E MP+EP VWGAL G+ +H + ++ + + + +L+P
Sbjct: 447 ACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQP 506
Query: 443 NNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVKH 502
++ G Y LL+N Y+ + WD+V+RVRK M+D+ + K+PG+SW+E + G + EF+A D K
Sbjct: 507 SHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVK-GKLCEFIAFDDKK 565
Query: 503 P-EINEIKKALD 513
P E +++ K LD
Sbjct: 566 PLESDDLYKTLD 577
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 299 bits (765), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 168/503 (33%), Positives = 261/503 (51%), Gaps = 38/503 (7%)
Query: 12 VVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
++S +L +Q HA + + L ++ + L+ T P SY + +++
Sbjct: 42 ILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATN-PEPKTVSYAHSILNRI 100
Query: 72 PSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALF---SAVTNLTLGT 128
SPN F ++++IRAY AL ++ M + P ++F+ + +A G
Sbjct: 101 GSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGR 160
Query: 129 QLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNG 188
Q+H + G +D+FV NT++ +Y +SG + ARKV D MP RD VSW L++AY G
Sbjct: 161 QIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKG 220
Query: 189 DMNSARELFDELD-------------------------------VKDKVAWTAMVTGYAQ 217
++ AR LFDE++ V+D V+W AMVT YA
Sbjct: 221 LVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAH 280
Query: 218 NAMPKEALEFF-RCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARN 276
E LE F + L ++ + D TL +SACA LG+ +WV + G
Sbjct: 281 VGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGI--EIE 338
Query: 277 VLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLE 336
+ +ALVDMYSKCG +++A VFR +R+ T++S+I ++HG + A+++F EM+
Sbjct: 339 GFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVY 398
Query: 337 TEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLE 396
KPN +TF+GVL AC H G++DQ + LF M Y V P+ +HY CM DLLGR G +E
Sbjct: 399 EGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIE 458
Query: 397 KALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYA 456
+A +LV +P + + +LLGA G + AE ++ L EL + Y +SN YA
Sbjct: 459 EAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYA 518
Query: 457 SAGRWDDVSRVRKLMRDKNLKKN 479
S GRW+ V R+ MR + + ++
Sbjct: 519 SDGRWEKVIDGRRNMRAERVNRS 541
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 298 bits (764), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 173/538 (32%), Positives = 279/538 (51%), Gaps = 70/538 (13%)
Query: 14 SILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPS 73
++ C + Q+HA I R L Q +I+ + +++ SY +F +VPS
Sbjct: 15 TLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSS---SSSLSYSSSVFERVPS 71
Query: 74 PNPFLYSALIRAYTLRGPFTEALR-LYTSMRNQRITPISFTFSALFSAVTN---LTLGTQ 129
P +L++ LI+ Y+ + F E + L MR P +TF + +N + +G+
Sbjct: 72 PGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSS 131
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAY----- 184
+H L +GF D+ V + + Y K L SARKVF EMP+R+ VSWT L+ AY
Sbjct: 132 VHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGE 191
Query: 185 --------------------------ARNGDMNSARELFDELDVKDKVAWTAMVT----- 213
++GD+ +A++LFDE+ +D +++T+M+
Sbjct: 192 LEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKG 251
Query: 214 --------------------------GYAQNAMPKEALEFFRCLREAGMETDEVTLAGAI 247
GYAQN P EA + F + ++ DE + G +
Sbjct: 252 GDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLM 311
Query: 248 SACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERN 307
SAC+Q+G + + V + + +V AL+DM +KCG+++ A +F M +R+
Sbjct: 312 SACSQMGCFELCEKVDSYLHQRMNKFSSHYVV-PALIDMNAKCGHMDRAAKLFEEMPQRD 370
Query: 308 AFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFS 367
+Y SM+ G AIHG AI+LF +M++ I P+ V F +L C + LV++G F
Sbjct: 371 LVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFE 430
Query: 368 NMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNP 427
M Y ++ S DHY+C+ +LL R G L++A +L+++MP E + + WG+LLG +HGN
Sbjct: 431 LMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNT 490
Query: 428 DVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWV 485
++AE+V+RHLFELEP + G+Y+LLSN YA+ RW DV+ +R M + + K G SW+
Sbjct: 491 EIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 298 bits (764), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 162/434 (37%), Positives = 244/434 (56%), Gaps = 39/434 (8%)
Query: 79 YSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN---LTLGTQLHAHAL 135
++++ +AY++ G +A LY M + P TF L ++ N LT G +H+HA+
Sbjct: 224 WNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAI 283
Query: 136 LLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARE 195
LG DI NT I MY KS D SAR
Sbjct: 284 HLGTDQDIEAINTFISMYSKSE-------------------------------DTCSARL 312
Query: 196 LFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGA 255
LFD + + V+WT M++GYA+ EAL F + ++G + D VTL IS C + G+
Sbjct: 313 LFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGS 372
Query: 256 SKDADWVRCIAESSGFGPAR-NVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSM 314
+ W+ A + +G R NV++ +AL+DMYSKCG++ EA ++F E+ T+++M
Sbjct: 373 LETGKWID--ARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTM 430
Query: 315 IVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYG 374
I G+A++G A+KLF +M++ + KPNH+TF+ VL AC H+G +++G F M+ Y
Sbjct: 431 IAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYN 490
Query: 375 VVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVS 434
+ P DHY+CM DLLGR G LE+AL+L+ M +P+ +WGALL A +H N +AE +
Sbjct: 491 ISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAA 550
Query: 435 RHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHE 494
LF LEP Y+ ++N YA+AG WD +R+R +M+ +N+KK PG S ++ NG H
Sbjct: 551 ESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQV-NGKNHS 609
Query: 495 FLAGDVKHPEINEI 508
F G+ H E NE+
Sbjct: 610 FTVGEHGHVE-NEV 622
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 127/291 (43%), Gaps = 38/291 (13%)
Query: 83 IRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT---LGTQLHAHALLLGF 139
IR R E+L L+ M+ P +FTF + A L +HAH + F
Sbjct: 24 IREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPF 83
Query: 140 ASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDE 199
SD+FV + M+VK +D A KVF+ MP+RD +W +++ + ++G + A LF E
Sbjct: 84 WSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFRE 143
Query: 200 LDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDA 259
+ + + + V Q+A +++L+ + G+
Sbjct: 144 MRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIR---------------------- 181
Query: 260 DWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK--ERNAFTYSSMIVG 317
G V V + + Y KCG+++ A VF + +R +++SM
Sbjct: 182 -----------LGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKA 230
Query: 318 FAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSN 368
+++ G A A L+ ML E KP+ TF+ + +C + + QG+ + S+
Sbjct: 231 YSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSH 281
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 141/350 (40%), Gaps = 52/350 (14%)
Query: 21 TLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYS 80
TL + + +H+H Q I + + + RLLF + S ++
Sbjct: 271 TLTQGRLIHSHAIHLGTDQDIEAINTFI----SMYSKSEDTCSARLLFDIMTSRTCVSWT 326
Query: 81 ALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV---TNLTLGTQLHAHALLL 137
+I Y +G EAL L+ +M P T +L S +L G + A A +
Sbjct: 327 VMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIY 386
Query: 138 GFASD-IFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSAREL 196
G D + + N +I MY K G + AR +FD P++ VV+WT +I YA NG
Sbjct: 387 GCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNG-------- 438
Query: 197 FDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGA- 255
+ EAL+ F + + + + +T + ACA G+
Sbjct: 439 -----------------------IFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSL 475
Query: 256 SKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER-NAFTYSSM 314
K ++ + + P + S +VD+ + G +EEA + R M + +A + ++
Sbjct: 476 EKGWEYFHIMKQVYNISPGLDHY--SCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGAL 533
Query: 315 IVGFAIHGRAR----AAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVD 360
+ IH + AA LF LE ++ +V + A AG+ D
Sbjct: 534 LNACKIHRNVKIAEQAAESLFN--LEPQMAAPYVEMANIYAA---AGMWD 578
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 98/224 (43%), Gaps = 12/224 (5%)
Query: 207 AWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIA 266
AW + P E+L FR ++ G E + T ACA+L + V
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 267 ESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARA 326
S F +V VG+A VDM+ KC +V+ A VF M ER+A T+++M+ GF G
Sbjct: 79 IKSPFWS--DVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDK 136
Query: 327 AIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMA 386
A LF EM EI P+ VT + ++ + + ++ L M G+ D +A
Sbjct: 137 AFSLFREMRLNEITPDSVTVMTLIQSAS----FEKSLKLLEAMHAV-GIRLGVDVQVTVA 191
Query: 387 D----LLGRAGHLEKALQLVETMPVEPNGAV-WGALLGASHVHG 425
+ G+ G L+ A + E + V W ++ A V G
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFG 235
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 297 bits (760), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 188/596 (31%), Positives = 295/596 (49%), Gaps = 68/596 (11%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL---GTQ 129
+ + F ++A+I G +AL ++ M + P + T + SA + L + G++
Sbjct: 314 TADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSE 373
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYA---- 185
+H+ A+ +GF D+ V N+++ MY K G L+ ARKVFD + +DV +W +IT Y
Sbjct: 374 VHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGY 433
Query: 186 -------------------------------RNGDMNSARELFDELDVKDKV-----AWT 209
+NGD A +LF ++ KV W
Sbjct: 434 CGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWN 493
Query: 210 AMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESS 269
++ GY QN EALE FR ++ + + VT+ + ACA L +K + E
Sbjct: 494 LIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAK------MVREIH 547
Query: 270 GFGPARNV----LVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRAR 325
G RN+ V +AL D Y+K G++E + +F GM+ ++ T++S+I G+ +HG
Sbjct: 548 GCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYG 607
Query: 326 AAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACM 385
A+ LF +M I PN T +++A G VD+G+ +F ++ Y ++P+ +H + M
Sbjct: 608 PALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAM 667
Query: 386 ADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNI 445
L GRA LE+ALQ ++ M ++ +W + L +HG+ D+A + +LF LEP N
Sbjct: 668 VYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENT 727
Query: 446 GNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEI 505
++S YA + K RD LKK G SW+E RN +IH F GD
Sbjct: 728 ATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRN-LIHTFTTGD------ 780
Query: 506 NEIKKALDDLLERLKAIGYLPNLSSVPYD----IGDKEKRFLLMAHSEKLALAFGLLNTD 561
+ K D L ++ + L N S Y+ I ++ + HSEK A+AFGL+++
Sbjct: 781 -QSKLCTDVLYPLVEKMSRLDNRSD-QYNGELWIEEEGREETCGIHSEKFAMAFGLISSS 838
Query: 562 AGS--TIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFLNGACSCGDFW 615
S TI+I+KNLR+C DCH SK G I++ D HHF NG CSC D+W
Sbjct: 839 GASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 129/445 (28%), Positives = 207/445 (46%), Gaps = 56/445 (12%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN- 123
R +F + N F +SA+I AY+ + E +L+ M + P F F + N
Sbjct: 135 RKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANC 194
Query: 124 --LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
+ G +H+ + LG +S + V+N+++ +Y K G LD A K F M +RDV++W ++
Sbjct: 195 GDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVL 254
Query: 182 TAYARNGDMNSARELFDELD---------------------------------------V 202
AY +NG A EL E++
Sbjct: 255 LAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGIT 314
Query: 203 KDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWV 262
D WTAM++G N M +AL+ FR + AG+ + VT+ A+SAC+ L V
Sbjct: 315 ADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEV 374
Query: 263 RCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHG 322
IA GF +VLVG++LVDMYSKCG +E+A VF +K ++ +T++SMI G+ G
Sbjct: 375 HSIAVKMGF--IDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAG 432
Query: 323 RARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHY 382
A +LF M + ++PN +T+ ++ G + LF ME V + +
Sbjct: 433 YCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATW 492
Query: 383 ACMADLLGRAGHLEKALQLVETMPVE---PNGAVWGALLGA-SHVHGNPDVAEI----VS 434
+ + G ++AL+L M PN +LL A +++ G V EI +
Sbjct: 493 NLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLR 552
Query: 435 RHLFELEPNNIGNYLLLSNTYASAG 459
R+L + + N L++TYA +G
Sbjct: 553 RNLDAIHA--VKN--ALTDTYAKSG 573
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 184/443 (41%), Gaps = 61/443 (13%)
Query: 56 PHL-PIHSYPRLLFSQVPSPNPF---LYSALIRAYTLRGPFTEALRLYTSMRNQRITPIS 111
P L P L F++ PN + L R G EA + S+ Q
Sbjct: 26 PELHPKSRKKNLSFTKKKEPNIIPDEQFDYLCR----NGSLLEAEKALDSLFQQGSKVKR 81
Query: 112 FTFSALFSAVTN---LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDE 168
T+ L + + + LG LHA L D+FV ++ MY K GC+ ARKVFD
Sbjct: 82 STYLKLLESCIDSGSIHLGRILHARFGLFT-EPDVFVETKLLSMYAKCGCIADARKVFDS 140
Query: 169 MPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFF 228
M +R++ +W+ +I AY+R W +E + F
Sbjct: 141 MRERNLFTWSAMIGAYSREN------------------RW-------------REVAKLF 169
Query: 229 RCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYS 288
R + + G+ D+ + CA G + + + G + V ++++ +Y+
Sbjct: 170 RLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSC--LRVSNSILAVYA 227
Query: 289 KCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVG 348
KCG ++ A FR M+ER+ ++S+++ + +G+ A++L EM + I P VT+
Sbjct: 228 KCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNI 287
Query: 349 VLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM--- 405
++ G D L ME +G+ + M L G +AL + M
Sbjct: 288 LIGGYNQLGKCDAAMDLMQKME-TFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLA 346
Query: 406 PVEPNGAVWGALLGASH----VHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRW 461
V PN + + A ++ +V I + F ++ +GN L+ + Y+ G+
Sbjct: 347 GVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGF-IDDVLVGNSLV--DMYSKCGKL 403
Query: 462 DDVSRVRKLMRDKNLKKNPGYSW 484
+D +V +++K++ Y+W
Sbjct: 404 EDARKVFDSVKNKDV-----YTW 421
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 116/262 (44%), Gaps = 26/262 (9%)
Query: 276 NVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEML 335
+V V + L+ MY+KCG + +A VF M+ERN FT+S+MI ++ R R KLF M+
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMM 173
Query: 336 ETEIKPNHVTFVGVLVACTHAGLVDQGQYLFS-----NMEGCYGVVPSADHYACMADLLG 390
+ + P+ F +L C + G V+ G+ + S M C V S + +
Sbjct: 174 KDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNS------ILAVYA 227
Query: 391 RAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVA-EIVSRHLFELEPNNIGNYL 449
+ G L+ A + M E + W ++L A +G + A E+V E + +
Sbjct: 228 KCGELDFATKFFRRMR-ERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWN 286
Query: 450 LLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIK 509
+L Y G+ D + + M + + ++W +G+IH N ++
Sbjct: 287 ILIGGYNQLGKCDAAMDLMQKMETFGITADV-FTWTAMISGLIH------------NGMR 333
Query: 510 KALDDLLERLKAIGYLPNLSSV 531
D+ ++ G +PN ++
Sbjct: 334 YQALDMFRKMFLAGVVPNAVTI 355
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 12 VVSILNTCTTLRRAK---QLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLF 68
++S+L C L AK ++H + R NL I + LT T+ Y R +F
Sbjct: 527 ILSLLPACANLLGAKMVREIHGCVLRRNLDA----IHAVKNALTDTYAKSGDIEYSRTIF 582
Query: 69 SQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGT 128
+ + + +++LI Y L G + AL L+ M+ Q ITP T S++ A + +G
Sbjct: 583 LGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILA--HGLMGN 640
Query: 129 QLHAHALLLGFASDIFV------NNTMIKMYVKSGCLDSARKVFDEMP-QRDVVSWTELI 181
+ A+D + + M+ +Y ++ L+ A + EM Q + W +
Sbjct: 641 VDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFL 700
Query: 182 TAYARNGDMNSA 193
T +GD++ A
Sbjct: 701 TGCRIHGDIDMA 712
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/442 (33%), Positives = 250/442 (56%), Gaps = 7/442 (1%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT-- 122
R++F +P + ++ ++ Y G EAL Y R I F+F+ L +A
Sbjct: 133 RVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKS 192
Query: 123 -NLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
L L Q H L+ GF S++ ++ ++I Y K G ++SA++ FDEM +D+ WT LI
Sbjct: 193 RQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLI 252
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
+ YA+ GDM +A +LF E+ K+ V+WTA++ GY + AL+ FR + G++ ++
Sbjct: 253 SGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQF 312
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
T + + A A + + + + + P N +V S+L+DMYSK G++E + VFR
Sbjct: 313 TFSSCLCASASIASLRHGKEIHGYMIRTNVRP--NAIVISSLIDMYSKSGSLEASERVFR 370
Query: 302 GMKER-NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVD 360
++ + +++MI A HG A+++ +M++ ++PN T V +L AC+H+GLV+
Sbjct: 371 ICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVE 430
Query: 361 QGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGA 420
+G F +M +G+VP +HYAC+ DLLGRAG ++ ++ +E MP EP+ +W A+LG
Sbjct: 431 EGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGV 490
Query: 421 SHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNP 480
+HGN ++ + + L +L+P + Y+LLS+ YA G+W+ V ++R +M+ + + K
Sbjct: 491 CRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEK 550
Query: 481 GYSWVESRNGVIHEFLAGDVKH 502
SW+E V F D H
Sbjct: 551 AVSWIEIEKKV-EAFTVSDGSH 571
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 177/393 (45%), Gaps = 45/393 (11%)
Query: 72 PSPNPF-LYSALIRAYTLRGPFTEALRLYTSMRNQRIT-PISFTFSALFSA--VTNLTLG 127
P P + + + + + ++A+ S+ Q I P S L +L G
Sbjct: 6 PRKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQG 65
Query: 128 TQLHAHALLLGFAS-DIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYAR 186
+H H + GF + ++N +I MY+K G A KVFD+M R++ SW +++ Y +
Sbjct: 66 KWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVK 125
Query: 187 NGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGA 246
+G + AR +FD + +D V+W MV GYAQ+ EAL F++ R +G++ +E + AG
Sbjct: 126 SGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGL 185
Query: 247 ISACA---QLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
++AC QL ++ A +A G NV++ +++D Y+KCG +E A F M
Sbjct: 186 LTACVKSRQLQLNRQAHGQVLVA-----GFLSNVVLSCSIIDAYAKCGQMESAKRCFDEM 240
Query: 304 K-------------------------------ERNAFTYSSMIVGFAIHGRARAAIKLFY 332
E+N +++++I G+ G A+ LF
Sbjct: 241 TVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFR 300
Query: 333 EMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRA 392
+M+ +KP TF L A + G+ + M V P+A + + D+ ++
Sbjct: 301 KMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKS 359
Query: 393 GHLEKALQLVETMPVEPNGAVWGALLGASHVHG 425
G LE + ++ + + W ++ A HG
Sbjct: 360 GSLEASERVFRICDDKHDCVFWNTMISALAQHG 392
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/492 (34%), Positives = 268/492 (54%), Gaps = 15/492 (3%)
Query: 15 ILNTCTTLRRAK---QLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
+L C+ L K Q+H + + L S + N L L L + R +F ++
Sbjct: 127 VLKACSRLGFVKGGMQIHGFLKKTGL-WSDLFLQNCLIGLYLKCGCLGL---SRQMFDRM 182
Query: 72 PSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLH 131
P + Y+++I Y G A L+ M + IS+ +++ S + G +
Sbjct: 183 PKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISW--NSMISGYAQTSDGVDIA 240
Query: 132 AHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMN 191
+ D+ N+MI YVK G ++ A+ +FD MP+RDVV+W +I YA+ G ++
Sbjct: 241 SKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVH 300
Query: 192 SARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCL-REAGMETDEVTLAGAISAC 250
A+ LFD++ +D VA+ +M+ GY QN EALE F + +E+ + D+ TL + A
Sbjct: 301 HAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAI 360
Query: 251 AQLG-ASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAF 309
AQLG SK D I E + + +G AL+DMYSKCG+++ A VF G++ ++
Sbjct: 361 AQLGRLSKAIDMHLYIVEKQFYLGGK---LGVALIDMYSKCGSIQHAMLVFEGIENKSID 417
Query: 310 TYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNM 369
+++MI G AIHG +A + ++ +KP+ +TFVGVL AC+H+GLV +G F M
Sbjct: 418 HWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELM 477
Query: 370 EGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDV 429
+ + P HY CM D+L R+G +E A L+E MPVEPN +W L A H +
Sbjct: 478 RRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFET 537
Query: 430 AEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRN 489
E+V++HL N +Y+LLSN YAS G W DV RVR +M+++ ++K PG SW+E +
Sbjct: 538 GELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIE-LD 596
Query: 490 GVIHEFLAGDVK 501
G +HEF ++
Sbjct: 597 GRVHEFFVDSIE 608
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/487 (25%), Positives = 233/487 (47%), Gaps = 45/487 (9%)
Query: 13 VSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLL-------RHLTTTFPHLPIHSYPR 65
+ +L +C T Q+H + + + ++S + T ++ R F H Y
Sbjct: 16 IHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHV 75
Query: 66 LLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT 125
FS +PFL++A+I++++ +AL L M ++ F+ S + A + L
Sbjct: 76 CSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLG 135
Query: 126 L---GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELIT 182
G Q+H G SD+F+ N +I +Y+K GCL +R++FD MP+RD VS+ +I
Sbjct: 136 FVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMID 195
Query: 183 AYARNGDMNSARELFD--ELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
Y + G + SARELFD +++K+ ++W +M++GYAQ + + ++ L E D
Sbjct: 196 GYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTS---DGVDIASKLFADMPEKDL 252
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
++ I + G +DA + + P R+V+ + ++D Y+K G V A +F
Sbjct: 253 ISWNSMIDGYVKHGRIEDAKGLFDVM------PRRDVVTWATMIDGYAKLGFVHHAKTLF 306
Query: 301 RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEM-LETEIKPNHVTFVGVLVACTHAG-- 357
M R+ Y+SM+ G+ + A+++F +M E+ + P+ T V VL A G
Sbjct: 307 DQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRL 366
Query: 358 --LVDQGQYLFSN---MEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGA 412
+D Y+ + G GV + D+ + G ++ A+ + E + N +
Sbjct: 367 SKAIDMHLYIVEKQFYLGGKLGVA--------LIDMYSKCGSIQHAMLVFEGI---ENKS 415
Query: 413 V--WGALLGASHVHGNPDVA--EIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVR 468
+ W A++G +HG + A ++ L+P++I ++ + N + +G +
Sbjct: 416 IDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDI-TFVGVLNACSHSGLVKEGLLCF 474
Query: 469 KLMRDKN 475
+LMR K+
Sbjct: 475 ELMRRKH 481
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 164/474 (34%), Positives = 256/474 (54%), Gaps = 18/474 (3%)
Query: 23 RRAKQLHAHIYRHNLHQSSYI-ITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSA 81
+ K++HA I + I I L+ HL SY R +F ++P P Y+
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCG-----CLSYARQVFDELPKPTLSAYNY 105
Query: 82 LIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA--------VTNLTLGTQLHAH 133
+I Y G E L L M +T S + A + +L +HA
Sbjct: 106 MISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHAR 165
Query: 134 ALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSA 193
+ D + ++ YVKSG L+SAR VF+ M +VV T +I+ Y G + A
Sbjct: 166 IIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDA 225
Query: 194 RELFDELDVKDKVAWTAMVTGYAQNA-MPKEALEFFRCLREAGMETDEVTLAGAISACAQ 252
E+F+ VKD V + AMV G++++ K +++ + ++ AG + T A I AC+
Sbjct: 226 EEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSV 285
Query: 253 LGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYS 312
L + + V SG ++ +GS+L+DMY+KCG + +A VF M+E+N F+++
Sbjct: 286 LTSHEVGQQVHAQIMKSGV--YTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWT 343
Query: 313 SMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGC 372
SMI G+ +G A++LF M E I+PN+VTF+G L AC+H+GLVD+G +F +M+
Sbjct: 344 SMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRD 403
Query: 373 YGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEI 432
Y + P +HYAC+ DL+GRAG L KA + MP P+ +W ALL + ++HGN ++A I
Sbjct: 404 YSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASI 463
Query: 433 VSRHLFELEPNN-IGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWV 485
+ LF+L + G YL LSN YAS +WD+VS++R++M+ + + K G SW
Sbjct: 464 AASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWT 517
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 160/478 (33%), Positives = 263/478 (55%), Gaps = 14/478 (2%)
Query: 12 VVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
+V++ C LR A + I + H S +I+ + + + R LF +
Sbjct: 228 LVNVYAKCGDLRMASYMLEQIREPDDHSLSALISG--------YANCGRVNESRGLFDRK 279
Query: 72 PSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL---GT 128
+ L++++I Y EAL L+ MRN+ S T +A+ +A L G
Sbjct: 280 SNRCVILWNSMISGYIANNMKMEALVLFNEMRNE-TREDSRTLAAVINACIGLGFLETGK 338
Query: 129 QLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNG 188
Q+H HA G DI V +T++ MY K G A K+F E+ D + +I Y G
Sbjct: 339 QMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCG 398
Query: 189 DMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAIS 248
++ A+ +F+ ++ K ++W +M G++QN E LE+F + + + TDEV+L+ IS
Sbjct: 399 RIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVIS 458
Query: 249 ACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNA 308
ACA + + + + V A ++ G + +V S+L+D+Y KCG VE VF M + +
Sbjct: 459 ACASISSLELGEQV--FARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDE 516
Query: 309 FTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSN 368
++SMI G+A +G+ AI LF +M I+P +TF+ VL AC + GLV++G+ LF +
Sbjct: 517 VPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFES 576
Query: 369 MEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPD 428
M+ +G VP +H++CM DLL RAG++E+A+ LVE MP + +G++W ++L +G
Sbjct: 577 MKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKA 636
Query: 429 VAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVE 486
+ + + + ELEP N Y+ LS +A++G W+ + VRKLMR+ N+ KNPG SW +
Sbjct: 637 MGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 187/399 (46%), Gaps = 42/399 (10%)
Query: 62 SYPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV 121
S R LF+ +P + ++L+ Y L G EALRL+ + + + T + + A
Sbjct: 141 SVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELN---FSADAITLTTVLKAC 197
Query: 122 TNL---TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWT 178
L G Q+HA L+ G D +N++++ +Y K G L A + +++ + D S +
Sbjct: 198 AELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLS 257
Query: 179 ELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET 238
LI+ YA G +N +R LFD + + W +M++GY N M EAL F +R E
Sbjct: 258 ALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETRE- 316
Query: 239 DEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGN------ 292
D TLA I+AC LG + + C A FG +++V S L+DMYSKCG+
Sbjct: 317 DSRTLAAVINACIGLGFLETGKQMHCHA--CKFGLIDDIVVASTLLDMYSKCGSPMEACK 374
Query: 293 -------------------------VEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAA 327
+++A VF ++ ++ +++SM GF+ +G
Sbjct: 375 LFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVET 434
Query: 328 IKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMAD 387
++ F++M + ++ + V+ V+ AC ++ G+ +F+ G+ + + D
Sbjct: 435 LEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARAT-IVGLDSDQVVSSSLID 493
Query: 388 LLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGN 426
L + G +E ++ +TM V+ + W +++ +G
Sbjct: 494 LYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYATNGQ 531
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 143/336 (42%), Gaps = 62/336 (18%)
Query: 125 TLGTQLHAHALLLGFASDI-FVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
TL Q + L GF S I V N +++MY +SG + AR +FDEMP R+ SW +I
Sbjct: 43 TLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEG 102
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQ-----------NAMPKE--------- 223
Y +G+ ++ FD + +D +W +V+G+A+ NAMP++
Sbjct: 103 YMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLL 162
Query: 224 --------ALEFFRCLREAGMETDEVTLAGAISACAQLGASK------------------ 257
A E R +E D +TL + ACA+L A K
Sbjct: 163 HGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDS 222
Query: 258 --DADWVRCIAESSGFGPARNVLVG---------SALVDMYSKCGNVEEAYNVFRGMKER 306
++ V A+ A +L SAL+ Y+ CG V E+ +F R
Sbjct: 223 KMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNR 282
Query: 307 NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLF 366
++SMI G+ + A+ LF EM E + + T V+ AC G ++ G+ +
Sbjct: 283 CVILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGKQM- 340
Query: 367 SNMEGC-YGVVPSADHYACMADLLGRAGHLEKALQL 401
+ C +G++ + + D+ + G +A +L
Sbjct: 341 -HCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKL 375
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 171/508 (33%), Positives = 267/508 (52%), Gaps = 57/508 (11%)
Query: 19 CTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLP-----IHSYPRLLFSQVPS 73
C T+++ K H+ H LH+++Y I+ LL T F HLP H Y +F +
Sbjct: 21 CNTVKQIKSTHSLFIIHGLHRNTYAISKLL----TAFLHLPNLNKHFH-YASSIFDSIEI 75
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSM---RNQRITPISFTFSALFSAVTN---LTLG 127
PN F+Y +IR + LR + M + I P TF L A ++G
Sbjct: 76 PNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVG 135
Query: 128 TQLHAHALLLG-FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYAR 186
Q+H + G F SD V ++++YV+ L ARKV
Sbjct: 136 KQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKV--------------------- 174
Query: 187 NGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGA 246
FDE+ D V W ++ GY + + E LE FR + G+E DE ++ A
Sbjct: 175 ----------FDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTA 224
Query: 247 ISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER 306
++ACAQ+GA W+ + + + +V VG+ALVDMY+KCG +E A VF+ + R
Sbjct: 225 LTACAQVGALAQGKWIHEFVKKKSWIES-DVFVGTALVDMYAKCGCIETAVEVFKKLTRR 283
Query: 307 NAFTYSSMIVGFAIHGRARAAIKLFYEMLETE--IKPNHVTFVGVLVACTHAGLVDQGQY 364
N F+++++I G+A +G A+ A+ E LE E IKP+ V +GVL AC H G +++G+
Sbjct: 284 NVFSWAALIGGYAAYGYAKKAMTCL-ERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRS 342
Query: 365 LFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVH 424
+ NME Y + P +HY+C+ DL+ RAG L+ AL L+E MP++P +VWGALL H
Sbjct: 343 MLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTH 402
Query: 425 GNPDVAEIVSRHLFELEPNNI----GNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNP 480
N ++ E+ ++L +LE N+ + LSN Y S R + S+VR ++ + ++K P
Sbjct: 403 KNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTP 462
Query: 481 GYSWVESRNGVIHEFLAGDVKHPEINEI 508
G+S +E +G + +F++GDV HP + +I
Sbjct: 463 GWSVLEV-DGNVTKFVSGDVSHPNLLQI 489
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 162/516 (31%), Positives = 280/516 (54%), Gaps = 17/516 (3%)
Query: 15 ILNTCTTLRRAKQLHAHIYRHN-LHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPS 73
++ + L KQ+H HI L +Y+ +L++ + L +F+++P
Sbjct: 139 LMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKF----YMELGNFGVAEKVFARMPH 194
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTNLTLGTQL 130
P+ ++ +I Y +G EAL+LY M + I P +T +L ++++ LG +
Sbjct: 195 PDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGV 254
Query: 131 HAHALLLG--FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNG 188
H G ++S++ ++N ++ MY K A++ FD M ++D+ SW ++ + R G
Sbjct: 255 HGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLG 314
Query: 189 DMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALE--FFRCLREAGMETDEVTLAGA 246
DM +A+ +FD++ +D V+W +++ GY++ + + F+ ++ D VT+
Sbjct: 315 DMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSL 374
Query: 247 ISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER 306
IS A G WV + + + SAL+DMY KCG +E A+ VF+ E+
Sbjct: 375 ISGAANNGELSHGRWVHGLVIR--LQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEK 432
Query: 307 NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLF 366
+ ++SMI G A HG + A++LF M E + PN+VT + VL AC+H+GLV++G ++F
Sbjct: 433 DVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVF 492
Query: 367 SNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVE-TMPVEPNGAVWGALLGASHVHG 425
++M+ +G P +HY + DLL RAG +E+A +V+ MP+ P+ ++WG++L A
Sbjct: 493 NHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGE 552
Query: 426 NPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWV 485
+ + AE+ L +LEP G Y+LLSN YA+ GRW + R+ M ++ +KK GYS V
Sbjct: 553 DIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSV 612
Query: 486 ESRNGVIHEFLAGDVK-HPEINEIKKALDDLLERLK 520
G +H F+A + + HP EIK+ L L +K
Sbjct: 613 VGVEG-LHRFVAAEKQNHPRWTEIKRILQHLYNEMK 647
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/480 (25%), Positives = 211/480 (43%), Gaps = 84/480 (17%)
Query: 8 LEWQVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLL 67
L Q + +L C + + KQ+ A I R NL ++ ++ L+ T+P + L
Sbjct: 33 LNHQSLVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPE-NLDLAKLLF 91
Query: 68 FSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLG 127
+ P+PN F+Y+ +I A + E LY+SM R++P TF L A + L+
Sbjct: 92 LNFTPNPNVFVYNTMISAVS--SSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEV 149
Query: 128 TQLHAHALLLGFAS-DIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYAR 186
Q+H H ++ G S ++ N+++K Y++ G A KVF MP DV S+ +I YA+
Sbjct: 150 KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAK 209
Query: 187 NGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGA 246
G EAL+ + + G+E DE T+
Sbjct: 210 QG-------------------------------FSLEALKLYFKMVSDGIEPDEYTVLSL 238
Query: 247 ISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKC---------------- 290
+ C L + V E G + N+++ +AL+DMY KC
Sbjct: 239 LVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKK 298
Query: 291 ---------------GNVEEAYNVFRGMKERNAFTYSSMIVGFAIHG-RARAAIKLFYEM 334
G++E A VF M +R+ +++S++ G++ G R +LFYEM
Sbjct: 299 DMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEM 358
Query: 335 LETE-IKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVP----SADHY--ACMAD 387
E +KP+ VT V ++ + G + G+++ +G+V D + + + D
Sbjct: 359 TIVEKVKPDRVTMVSLISGAANNGELSHGRWV-------HGLVIRLQLKGDAFLSSALID 411
Query: 388 LLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVA-EIVSRHLFE-LEPNNI 445
+ + G +E+A + +T E + A+W +++ HGN A ++ R E + PNN+
Sbjct: 412 MYCKCGIIERAFMVFKT-ATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNV 470
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 289 bits (739), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 169/508 (33%), Positives = 267/508 (52%), Gaps = 57/508 (11%)
Query: 19 CTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLP-----IHSYPRLLFSQVPS 73
C T+++ K H+ H LH+++Y I+ LL T F HLP H Y +F +
Sbjct: 21 CNTVKQIKSTHSLFIIHGLHRNTYAISKLL----TAFLHLPNLNKHFH-YASSIFDSIEI 75
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSM---RNQRITPISFTFSALFSAVTN---LTLG 127
PN F+Y +IR + LR + M + ITP TF L A ++G
Sbjct: 76 PNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVG 135
Query: 128 TQLHAHALLLG-FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYAR 186
Q+H + G F SD V ++++YV+ L ARKV
Sbjct: 136 KQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKV--------------------- 174
Query: 187 NGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGA 246
FDE+ D V W ++ GY + + E LE F+ + G+E DE ++ A
Sbjct: 175 ----------FDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTA 224
Query: 247 ISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER 306
++ACAQ+GA W+ + + + +V VG+ALVDMY+KCG +E A VF + R
Sbjct: 225 LTACAQVGALAQGKWIHEFVKKKRWIES-DVFVGTALVDMYAKCGCIETAVEVFEKLTRR 283
Query: 307 NAFTYSSMIVGFAIHGRARAAIKLFYEMLETE--IKPNHVTFVGVLVACTHAGLVDQGQY 364
N F+++++I G+A +G A+ A + +E E IKP+ V +GVL AC H G +++G+
Sbjct: 284 NVFSWAALIGGYAAYGYAKKATTCL-DRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRT 342
Query: 365 LFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVH 424
+ NME YG+ P +HY+C+ DL+ RAG L+ AL L+E MP++P +VWGALL H
Sbjct: 343 MLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTH 402
Query: 425 GNPDVAEIVSRHLFELEPNNI----GNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNP 480
N ++ E+ ++L +LE N+ + LSN Y S R + +VR ++ + ++K P
Sbjct: 403 KNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTP 462
Query: 481 GYSWVESRNGVIHEFLAGDVKHPEINEI 508
G+S +E +G++ +F++GDV HP + +I
Sbjct: 463 GWSLLEV-DGIVTKFVSGDVSHPNLLQI 489
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 129/301 (42%), Gaps = 49/301 (16%)
Query: 12 VVSILNTCTTLRRAKQLHAHIYRHNLHQSS-YIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
+V+ L C KQ+H + ++ + S ++ T +LR + + R +F +
Sbjct: 123 IVACLKACF-FSVGKQIHCWVVKNGVFLSDGHVQTGVLR----IYVEDKLLFDARKVFDE 177
Query: 71 VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTNLTLG 127
+P P+ + L+ Y G +E L ++ M + I P F+ + +A V L G
Sbjct: 178 IPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQG 237
Query: 128 TQLHAHALLLGF-ASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYAR 186
+H + SD+FV ++ MY K GC+++A +VF+++ +R+V SW LI YA
Sbjct: 238 KWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAA 297
Query: 187 NGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGA 246
G A D ++ RE G++ D V L G
Sbjct: 298 YGYAKKATTCLDRIE------------------------------REDGIKPDSVVLLGV 327
Query: 247 ISACAQLGASKDADWVRCIAESS----GFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
++ACA G ++ R + E+ G P S +VD+ + G +++A ++
Sbjct: 328 LAACAHGGFLEEG---RTMLENMEARYGITPKHEHY--SCIVDLMCRAGRLDDALDLIEK 382
Query: 303 M 303
M
Sbjct: 383 M 383
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 163/556 (29%), Positives = 290/556 (52%), Gaps = 39/556 (7%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTN 123
+F+ V N Y+AL+ + G +AL+L+T M + + F+ ++ A V+
Sbjct: 373 IFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSE 432
Query: 124 LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
+ Q+H + G A + + ++ M + + A ++FD+ P
Sbjct: 433 KKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWP------------- 479
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFF-RCLREAGMETDEVT 242
+++S++ A T+++ GYA+N +P +A+ F R L E + DEV+
Sbjct: 480 ----SNLDSSK------------ATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVS 523
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
L ++ C LG + + C A +G+ ++ +G++L+ MY+KC + ++A +F
Sbjct: 524 LTLILAVCGTLGFREMGYQIHCYALKAGY--FSDISLGNSLISMYAKCCDSDDAIKIFNT 581
Query: 303 MKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVAC--THAGLVD 360
M+E + +++S+I + + A+ L+ M E EIKP+ +T V+ A T + +
Sbjct: 582 MREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLS 641
Query: 361 QGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGA 420
+ LF +M+ Y + P+ +HY +LG G LE+A + +MPV+P +V ALL +
Sbjct: 642 SCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDS 701
Query: 421 SHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNP 480
+H N VA+ V++ + +P Y+L SN Y+++G W +R+ MR++ +K+P
Sbjct: 702 CRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHP 761
Query: 481 GYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEK 540
SW+ N IH F A D HP+ +I + L+ L+ +GY PN V ++ + K
Sbjct: 762 AKSWIIHENK-IHSFHARDTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMK 820
Query: 541 RFLLMAHSEKLALAFGLLNTDA-GSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNM 599
+ L HS KLA+ +G+L+++ G +++MKN+ +C DCH S V R+IV+RD+
Sbjct: 821 KSFLFHHSAKLAVTYGILSSNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSS 880
Query: 600 RFHHFLNGACSCGDFW 615
FHHF+NG CSC D W
Sbjct: 881 GFHHFVNGKCSCRDLW 896
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 217/464 (46%), Gaps = 34/464 (7%)
Query: 9 EWQVVSILNTCTTLRRAK---QLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPR 65
E+ V+IL C + R Q+H I + S ++ +N L L +
Sbjct: 181 EYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFV-SNSLMSLYDKDSGSSCDDVLK 239
Query: 66 LLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSM-RNQRITPISFTFSALFSAVTN- 123
L F ++P + ++ ++ + G +A L+ M R + SFT S L S+ T+
Sbjct: 240 L-FDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDS 298
Query: 124 --LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
L G +LH A+ +G ++ VNN +I Y K + +++ M +D V++TE+I
Sbjct: 299 SVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMI 358
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
TAY G ++SA E+F + K+ + + A++ G+ +N +AL+ F + + G+E +
Sbjct: 359 TAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDF 418
Query: 242 TLAGAISACAQLGASKDADWVR--CIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNV 299
+L A+ AC + K ++ + CI FG A N + +AL+DM ++C + +A +
Sbjct: 419 SLTSAVDACGLVSEKKVSEQIHGFCIK----FGTAFNPCIQTALLDMCTRCERMADAEEM 474
Query: 300 FRGMKER--NAFTYSSMIVGFAIHGRARAAIKLFYEML-ETEIKPNHVTFVGVLVACTHA 356
F ++ +S+I G+A +G A+ LF+ L E ++ + V+ +L C
Sbjct: 475 FDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTL 534
Query: 357 GLVDQGQYLFSNMEGCYGVVPSADHYA------CMADLLGRAGHLEKALQLVETMPVEPN 410
G + G + CY + A +++ + + + + A+++ TM E +
Sbjct: 535 GFREMGYQI-----HCYAL--KAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMR-EHD 586
Query: 411 GAVWGALLGASHVHGNPDVAEIVSRHL--FELEPNNIGNYLLLS 452
W +L+ + N D A + + E++P+ I L++S
Sbjct: 587 VISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVIS 630
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 183/387 (47%), Gaps = 30/387 (7%)
Query: 63 YPR---LLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQ-RITPISFTFSALF 118
+PR L+F + SP Y+ALI ++ EAL+++ MR + P +TF A+
Sbjct: 129 FPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAIL 188
Query: 119 SA---VTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVK---SGCLDSARKVFDEMPQR 172
+A V+ +LG Q+H + GF + +FV+N+++ +Y K S C D K+FDE+PQR
Sbjct: 189 TACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSC-DDVLKLFDEIPQR 247
Query: 173 DVVSWTELITAYARNGDMNSARELFDELDV-----KDKVAWTAMVTGYAQNAMPKEALEF 227
DV SW ++++ + G + A +LF E++ D + +++ +++ E
Sbjct: 248 DVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGREL 307
Query: 228 F-RCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDM 286
R +R M+ E+++ A+ D V + E A++ + + ++
Sbjct: 308 HGRAIRIGLMQ--ELSVNNAL--IGFYSKFWDMKKVESLYE---MMMAQDAVTFTEMITA 360
Query: 287 YSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTF 346
Y G V+ A +F + E+N TY++++ GF +G A+KLF +ML+ ++ +
Sbjct: 361 YMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSL 420
Query: 347 VGVLVACTHAGLVDQGQYLFSNMEGC--YGVVPSADHYACMADLLGRAGHLEKALQLVET 404
+ AC GLV + + C +G + + D+ R + A ++ +
Sbjct: 421 TSAVDAC---GLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQ 477
Query: 405 MPVEPNGA-VWGALLGASHVHGNPDVA 430
P + + +++G +G PD A
Sbjct: 478 WPSNLDSSKATTSIIGGYARNGLPDKA 504
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 98/190 (51%), Gaps = 6/190 (3%)
Query: 180 LITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGM-ET 238
LI+ Y + G A +F L V++TA+++G+++ + EAL+ F +R+AG+ +
Sbjct: 120 LISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQP 179
Query: 239 DEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSK--CGNVEEA 296
+E T ++AC ++ + + SGF +V V ++L+ +Y K + ++
Sbjct: 180 NEYTFVAILTACVRVSRFSLGIQIHGLIVKSGF--LNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 297 YNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETE-IKPNHVTFVGVLVACTH 355
+F + +R+ ++++++ G++ A LFYEM E + T +L +CT
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTD 297
Query: 356 AGLVDQGQYL 365
+ ++ +G+ L
Sbjct: 298 SSVLLRGREL 307
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 279 VGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETE 338
+G+AL+ Y K G EA VF + +Y+++I GF+ A+K+F+ M +
Sbjct: 116 LGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAG 175
Query: 339 -IKPNHVTFVGVLVACTHAGLVDQG 362
++PN TFV +L AC G
Sbjct: 176 LVQPNEYTFVAILTACVRVSRFSLG 200
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 159/457 (34%), Positives = 266/457 (58%), Gaps = 12/457 (2%)
Query: 63 YPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALF---S 119
Y S++ P + ++ +IR ++ +++ +Y M + P T+ L S
Sbjct: 60 YAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSS 119
Query: 120 AVTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTE 179
++N LG LH + G D+F+ NT+I MY SARK+FDEMP +++V+W
Sbjct: 120 RLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNS 179
Query: 180 LITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFF-RCLREAGMET 238
++ AYA++GD+ SAR +FDE+ +D V W++M+ GY + +ALE F + +R +
Sbjct: 180 ILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKA 239
Query: 239 DEVTLAGAISACAQLGASKDADWV-RCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAY 297
+EVT+ I ACA LGA V R I + V++ ++L+DMY+KCG++ +A+
Sbjct: 240 NEVTMVSVICACAHLGALNRGKTVHRYILD---VHLPLTVILQTSLIDMYAKCGSIGDAW 296
Query: 298 NVF--RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTH 355
+VF +KE +A ++++I G A HG R +++LF++M E++I P+ +TF+ +L AC+H
Sbjct: 297 SVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSH 356
Query: 356 AGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWG 415
GLV + + F +++ G P ++HYACM D+L RAG ++ A + MP++P G++ G
Sbjct: 357 GGLVKEAWHFFKSLKES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLG 415
Query: 416 ALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKN 475
ALL HGN ++AE V + L EL+P+N G Y+ L+N YA ++ +R+ M K
Sbjct: 416 ALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKG 475
Query: 476 LKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKAL 512
+KK G+S ++ +G H F+A D H ++I L
Sbjct: 476 VKKIAGHSILD-LDGTRHRFIAHDKTHFHSDKIYAVL 511
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 125/283 (44%), Gaps = 34/283 (12%)
Query: 175 VSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREA 234
VS T +A + +GD++ A + +L W ++ G++ + P++++ + +
Sbjct: 43 VSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRF 102
Query: 235 GMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFG---------------------- 272
G+ D +T + + ++L K + C SG
Sbjct: 103 GLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASA 162
Query: 273 -------PARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRAR 325
P +N++ ++++D Y+K G+V A VF M ER+ T+SSMI G+ G
Sbjct: 163 RKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYN 222
Query: 326 AAIKLFYEMLET-EIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVP-SADHYA 383
A+++F +M+ K N VT V V+ AC H G +++G+ + + + +P +
Sbjct: 223 KALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVH--LPLTVILQT 280
Query: 384 CMADLLGRAGHLEKALQLVETMPV-EPNGAVWGALLGASHVHG 425
+ D+ + G + A + V E + +W A++G HG
Sbjct: 281 SLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHG 323
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 176/570 (30%), Positives = 276/570 (48%), Gaps = 102/570 (17%)
Query: 15 ILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSP 74
L C L +AKQ+HA + + + I+ + H T F I +Y + +
Sbjct: 9 FLQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSR-NIVTYVKRILKGFNGH 67
Query: 75 NPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTNLTLGTQLH 131
+ F + L+R + F E + +Y M N I P S +++ A + N+ G +H
Sbjct: 68 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIH 127
Query: 132 AHALLLGFASDIFVN-------------------------------NTMIKMYVKSGCLD 160
A AL G ++V N+++ Y++SG LD
Sbjct: 128 AQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELD 187
Query: 161 SARKVFDEMPQRDVVSWTELITAYARNGDMNS---------------------------- 192
AR+VFD++P++D VSW +I++YA+ GDM +
Sbjct: 188 EARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCRE 247
Query: 193 ---ARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFR---------------CLREA 234
AR FD + K+ V+W M++GY + + A E FR C +
Sbjct: 248 MKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQN 307
Query: 235 G------------------METDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARN 276
G ++ DE+TL+ +SA +QLG + WV G +
Sbjct: 308 GKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGI--KID 365
Query: 277 VLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLE 336
L+ ++L+D+Y K G+ +A+ +F + +++ +YS+MI+G I+G A A LF M+E
Sbjct: 366 DLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIE 425
Query: 337 TEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLE 396
+I PN VTF G+L A +H+GLV +G F++M+ + + PSADHY M D+LGRAG LE
Sbjct: 426 KKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMVDMLGRAGRLE 484
Query: 397 KALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYA 456
+A +L+++MP++PN VWGALL AS +H N + EI H +LE + G L+ Y+
Sbjct: 485 EAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYS 544
Query: 457 SAGRWDDVSRVRKLMRDKNLKKNPGYSWVE 486
S GRWDD VR +++K L K G SWVE
Sbjct: 545 SVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 163/497 (32%), Positives = 261/497 (52%), Gaps = 46/497 (9%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPI-SFTFSALFSAVTN 123
R LF ++ N ++A+I Y G F + L+ MR + + S T + +F A +
Sbjct: 228 RSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRD 287
Query: 124 LTL---GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVF-------------- 166
G+Q+H + D+F+ N+++ MY K G + A+ VF
Sbjct: 288 FVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSL 347
Query: 167 -----------------DEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWT 209
++MP +D+VSWT++I ++ G+++ ELF + KD + WT
Sbjct: 348 ITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWT 407
Query: 210 AMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCI---A 266
AM++ + N +EAL +F + + + + T + +SA A L AD + +
Sbjct: 408 AMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASL-----ADLIEGLQIHG 462
Query: 267 ESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARA 326
++ V ++LV MY KCGN +AY +F + E N +Y++MI G++ +G +
Sbjct: 463 RVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKK 522
Query: 327 AIKLFYEMLETEIK-PNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACM 385
A+KLF MLE+ K PN VTF+ +L AC H G VD G F +M+ Y + P DHYACM
Sbjct: 523 ALKLF-SMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACM 581
Query: 386 ADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNI 445
DLLGR+G L+ A L+ TMP +P+ VWG+LL AS H D+AE+ ++ L ELEP++
Sbjct: 582 VDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSA 641
Query: 446 GNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEI 505
Y++LS Y+ G+ D R+ + + K +KK+PG SW+ + G +H FLAGD +
Sbjct: 642 TPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILK-GEVHNFLAGDESQLNL 700
Query: 506 NEIKKALDDLLERLKAI 522
EI L + + ++ I
Sbjct: 701 EEIGFTLKMIRKEMELI 717
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 180/420 (42%), Gaps = 60/420 (14%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL 126
LF +P N Y+ +I + G F EA LY TP+ F
Sbjct: 135 LFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE------TPVKF-------------- 174
Query: 127 GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYAR 186
D +N ++ Y+++G + A +VF M ++VVS + ++ Y +
Sbjct: 175 --------------RDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCK 220
Query: 187 NGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAG-METDEVTLAG 245
G + AR LFD + ++ + WTAM+ GY + ++ F +R+ G ++ + TLA
Sbjct: 221 MGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAV 280
Query: 246 AISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE 305
AC ++ + + S ++ +G++L+ MYSK G + EA VF MK
Sbjct: 281 MFKACRDFVRYREGSQIHGLV--SRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKN 338
Query: 306 RNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYL 365
+++ +++S+I G R I YE+ E + V++ ++ + G + + L
Sbjct: 339 KDSVSWNSLITGLV----QRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVEL 394
Query: 366 FSNMEGCYGVVPSADH--YACMADLLGRAGHLEKALQLVETM---PVEPNGAVWGALLGA 420
F G++P D+ + M G+ E+AL M V PN + ++L A
Sbjct: 395 F-------GMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
Query: 421 SHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNT----YASAGRWDDVSRVRKLMRDKNL 476
+ D+ E + H + NI N L + N+ Y G +D ++ + + N+
Sbjct: 448 TASLA--DLIEGLQIH-GRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNI 504
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 116/233 (49%), Gaps = 17/233 (7%)
Query: 140 ASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDE 199
++ IF N+ I + ++G L A +F +M R +VSW +I+AYA NG M+ A ++FDE
Sbjct: 47 STAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDE 106
Query: 200 LDVKDKVAWTAMVTGYAQNAMP-KEALEFFRCLREAGMETDEVTLAGAISACAQLGASKD 258
+ V+ ++ AM+T +N +A E F + E + V+ A I+ + G +
Sbjct: 107 MPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIP----EKNAVSYATMITGFVRAGRFDE 162
Query: 259 ADWVRCIAESSGFGPA--RNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIV 316
A+++ AE+ P R+ + + L+ Y + G EA VF+GM + + SSM+
Sbjct: 163 AEFL--YAET----PVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVH 216
Query: 317 GFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNM 369
G+ GR A LF M E N +T+ ++ AG + G LF M
Sbjct: 217 GYCKMGRIVDARSLFDRMTER----NVITWTAMIDGYFKAGFFEDGFGLFLRM 265
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 285 bits (728), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 170/519 (32%), Positives = 275/519 (52%), Gaps = 50/519 (9%)
Query: 12 VVSILNTCT---TLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLF 68
+ S L CT L + KQ+H + L + + ++L+ + I R +F
Sbjct: 532 LASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLI----DMYSKCGIIKDARKVF 587
Query: 69 SQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV---TNLT 125
S +P + +ALI Y+ + EA+ L+ M + + P TF+ + A +LT
Sbjct: 588 SSLPEWSVVSMNALIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLT 646
Query: 126 LGTQLHAHALLLGFASD-IFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAY 184
LGTQ H GF+S+ ++ +++ MY+ S + A +F E+
Sbjct: 647 LGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSP------------ 694
Query: 185 ARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLA 244
K V WT M++G++QN +EAL+F++ +R G+ D+ T
Sbjct: 695 ------------------KSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFV 736
Query: 245 GAISACAQLGASKDADWVRCIAESSGFGPARNV--LVGSALVDMYSKCGNVEEAYNVFRG 302
+ C+ L + ++ + + F A ++ L + L+DMY+KCG+++ + VF
Sbjct: 737 TVLRVCSVLSSLREGRAIHSLI----FHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDE 792
Query: 303 MKER-NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
M+ R N +++S+I G+A +G A A+K+F M ++ I P+ +TF+GVL AC+HAG V
Sbjct: 793 MRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSD 852
Query: 362 GQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGAS 421
G+ +F M G YG+ DH ACM DLLGR G+L++A +E ++P+ +W +LLGA
Sbjct: 853 GRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGAC 912
Query: 422 HVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPG 481
+HG+ EI + L ELEP N Y+LLSN YAS G W+ + +RK+MRD+ +KK PG
Sbjct: 913 RIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPG 972
Query: 482 YSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLK 520
YSW++ H F AGD H EI +I+ L+DL + +K
Sbjct: 973 YSWIDVEQRT-HIFAAGDKSHSEIGKIEMFLEDLYDLMK 1010
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 176/381 (46%), Gaps = 44/381 (11%)
Query: 79 YSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV---TNLTLGTQLHAHAL 135
+++++ Y+ G + LR + S+ +I P FTFS + S TN+ G Q+H +
Sbjct: 128 WNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMI 187
Query: 136 LLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTEL--------------- 180
+G + + ++ MY K + AR+VF+ + + V WT L
Sbjct: 188 KMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVL 247
Query: 181 --------------------ITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAM 220
I Y R G + AR LF E+ D VAW M++G+ +
Sbjct: 248 VFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGC 307
Query: 221 PKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCI-AESSGFGPARNVLV 279
A+E+F +R++ +++ TL +SA +G + D + AE+ G A N+ V
Sbjct: 308 ETVAIEYFFNMRKSSVKSTRSTLGSVLSA---IGIVANLDLGLVVHAEAIKLGLASNIYV 364
Query: 280 GSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEI 339
GS+LV MYSKC +E A VF ++E+N +++MI G+A +G + ++LF +M +
Sbjct: 365 GSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGY 424
Query: 340 KPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKAL 399
+ TF +L C + ++ G F ++ + + + D+ + G LE A
Sbjct: 425 NIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDAR 483
Query: 400 QLVETMPVEPNGAVWGALLGA 420
Q+ E M + + W ++G+
Sbjct: 484 QIFERM-CDRDNVTWNTIIGS 503
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 171/391 (43%), Gaps = 57/391 (14%)
Query: 2 VGERRALEWQVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIH 61
V R+ V+S + L +HA + L + Y+ ++L+ + +
Sbjct: 323 VKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLV----SMYSKCEKM 378
Query: 62 SYPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFS-- 119
+F + N ++A+IR Y G + + L+ M++ FTF++L S
Sbjct: 379 EAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTC 438
Query: 120 -AVTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWT 178
A +L +G+Q H+ + A ++FV N ++ MY K G L+ AR++F+ M RD V+W
Sbjct: 439 AASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWN 498
Query: 179 ELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET 238
+I +Y Q+ EA + F+ + G+ +
Sbjct: 499 TIIGSY-------------------------------VQDENESEAFDLFKRMNLCGIVS 527
Query: 239 DEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYN 298
D LA + AC + V C++ G R++ GS+L+DMYSKCG +++A
Sbjct: 528 DGACLASTLKACTHVHGLYQGKQVHCLSVKCGLD--RDLHTGSSLIDMYSKCGIIKDARK 585
Query: 299 VFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVAC----- 353
VF + E + + +++I G++ A+ LF EML + P+ +TF ++ AC
Sbjct: 586 VFSSLPEWSVVSMNALIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPES 644
Query: 354 -----------THAGLVDQGQYLFSNMEGCY 373
T G +G+YL ++ G Y
Sbjct: 645 LTLGTQFHGQITKRGFSSEGEYLGISLLGMY 675
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 173/399 (43%), Gaps = 43/399 (10%)
Query: 107 ITPISFTFSALFSAVTNLT----LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSA 162
+TP S F + FS V L+ LG +++ H L S ++ ++++ + L +
Sbjct: 7 LTPSSAMFDS-FSFVRRLSYSPDLGRRIYGHVL----PSHDQIHQRLLEICLGQCKLFKS 61
Query: 163 RKVFDEMPQRDVVSW----------------------TELITAYARNGDMNSARELFDEL 200
RKVFDEMPQR ++ ++ YA+ ++ A + FD L
Sbjct: 62 RKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL 121
Query: 201 DVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDAD 260
+ KD AW +M++ Y+ P + L F L E + ++ T + +S CA+ +
Sbjct: 122 E-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGR 180
Query: 261 WVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAI 320
+ C G RN G ALVDMY+KC + +A VF + + N ++ + G+
Sbjct: 181 QIHC--SMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVK 238
Query: 321 HGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSAD 380
G A+ +F M + +P+H+ FV V+ G + + LF M P
Sbjct: 239 AGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVV 293
Query: 381 HYACMADLLGRAGHLEKALQLVETM---PVEPNGAVWGALLGASHVHGNPDVAEIVSRHL 437
+ M G+ G A++ M V+ + G++L A + N D+ +V
Sbjct: 294 AWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEA 353
Query: 438 FELE-PNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKN 475
+L +NI L + Y+ + + ++V + + +KN
Sbjct: 354 IKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKN 392
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 169/518 (32%), Positives = 261/518 (50%), Gaps = 48/518 (9%)
Query: 14 SILNTCTTLRR---AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
SIL +C +L Q+HA+ + NL SY+ +L+ + + R +F
Sbjct: 355 SILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLI----DMYAKCDCLTDARKVFDI 410
Query: 71 VPSPNPFLYSALIRAYTLRG---PFTEALRLYTSMRNQRITPISFTFSALFSA---VTNL 124
+ + L++A+I Y+ G EAL ++ MR + I P TF +L A +T+L
Sbjct: 411 FAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSL 470
Query: 125 TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAY 184
L Q+H G DIF + +I +Y CL +R V
Sbjct: 471 GLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLV------------------- 511
Query: 185 ARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLA 244
FDE+ VKD V W +M GY Q + +EAL F L+ + DE T A
Sbjct: 512 ------------FDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFA 559
Query: 245 GAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK 304
++A L + + C G N + +AL+DMY+KCG+ E+A+ F
Sbjct: 560 NMVTAAGNLASVQLGQEFHCQLLKRGLEC--NPYITNALLDMYAKCGSPEDAHKAFDSAA 617
Query: 305 ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQY 364
R+ ++S+I +A HG + A+++ +M+ I+PN++TFVGVL AC+HAGLV+ G
Sbjct: 618 SRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLK 677
Query: 365 LFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVH 424
F M +G+ P +HY CM LLGRAG L KA +L+E MP +P VW +LL
Sbjct: 678 QFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKA 736
Query: 425 GNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSW 484
GN ++AE + +P + G++ +LSN YAS G W + +VR+ M+ + + K PG SW
Sbjct: 737 GNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSW 796
Query: 485 VESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAI 522
+ N +H FL+ D H + N+I + LDDLL +++ +
Sbjct: 797 I-GINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIRGV 833
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 194/444 (43%), Gaps = 52/444 (11%)
Query: 14 SILNTCTTL---RRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
++L+ C+ L KQ+HAHI R+ L + ++ L+ + H LF+
Sbjct: 254 TVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHK----LFNG 309
Query: 71 VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN---LTLG 127
+P+ N ++ L+ Y EA+ L+TSM + P + S++ ++ + L G
Sbjct: 310 MPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFG 369
Query: 128 TQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARN 187
TQ+HA+ + +D +V N++I MY K CL ARKVFD DVV + +I Y+R
Sbjct: 370 TQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRL 429
Query: 188 GDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAI 247
G W EAL FR +R + +T +
Sbjct: 430 G-----------------TQWEL-----------HEALNIFRDMRFRLIRPSLLTFVSLL 461
Query: 248 SACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERN 307
A A L + + + + +G ++ GSAL+D+YS C ++++ VF MK ++
Sbjct: 462 RASASLTSLGLSKQIHGLMFK--YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKD 519
Query: 308 AFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQ---- 363
++SM G+ A+ LF E+ + +P+ TF ++ A + V GQ
Sbjct: 520 LVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHC 579
Query: 364 YLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHV 423
L C + +A + D+ + G E A + ++ + W +++ +
Sbjct: 580 QLLKRGLECNPYITNA-----LLDMYAKCGSPEDAHKAFDS-AASRDVVCWNSVISSYAN 633
Query: 424 HGNPDVA-EIVSRHLFE-LEPNNI 445
HG A +++ + + E +EPN I
Sbjct: 634 HGEGKKALQMLEKMMSEGIEPNYI 657
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 140/308 (45%), Gaps = 42/308 (13%)
Query: 63 YPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT 122
Y RL+F +P + ++ +I G +L+L+ + + P + S + SA +
Sbjct: 201 YARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACS 260
Query: 123 NLTL---GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTE 179
L G Q+HAH L G D + N +I YVK G + +A K+F+ MP ++++SWT
Sbjct: 261 ILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTT 320
Query: 180 LITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETD 239
L++ Y QNA+ KEA+E F + + G++ D
Sbjct: 321 LLSGY-------------------------------KQNALHKEAMELFTSMSKFGLKPD 349
Query: 240 EVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNV 299
+ +++CA L A V + G + V ++L+DMY+KC + +A V
Sbjct: 350 MYACSSILTSCASLHALGFGTQVHAYTIKANLG--NDSYVTNSLIDMYAKCDCLTDARKV 407
Query: 300 FRGMKERNAFTYSSMIVGFAIHG---RARAAIKLFYEMLETEIKPNHVTFVGVLVAC--- 353
F + +++MI G++ G A+ +F +M I+P+ +TFV +L A
Sbjct: 408 FDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASL 467
Query: 354 THAGLVDQ 361
T GL Q
Sbjct: 468 TSLGLSKQ 475
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 129/249 (51%), Gaps = 17/249 (6%)
Query: 180 LITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEAL----EFFRCLREAG 235
LI Y+R G M AR++F+++ ++ V+W+ MV+ + + +E+L EF+R +++
Sbjct: 85 LINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDS- 143
Query: 236 METDEVTLAGAISACAQLGASKDADWVRCIAES----SGFGPARNVLVGSALVDMYSKCG 291
+E L+ I AC+ G W+ +S SGF R+V VG+ L+D Y K G
Sbjct: 144 --PNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKSGFD--RDVYVGTLLIDFYLKDG 197
Query: 292 NVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLV 351
N++ A VF + E++ T+++MI G GR+ +++LFY+++E + P+ VL
Sbjct: 198 NIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLS 257
Query: 352 ACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNG 411
AC+ ++ G+ + +++ YG+ A + D + G + A +L MP N
Sbjct: 258 ACSILPFLEGGKQIHAHILR-YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP-NKNI 315
Query: 412 AVWGALLGA 420
W LL
Sbjct: 316 ISWTTLLSG 324
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 149/327 (45%), Gaps = 33/327 (10%)
Query: 28 LHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIRAYT 87
+H I L +Y+ +N+L +L + + Y R +F ++P N +S ++ A
Sbjct: 66 VHGQIIVWGLELDTYL-SNILINLYSRAGGMV---YARKVFEKMPERNLVSWSTMVSACN 121
Query: 88 LRGPFTEALRLYTSM-RNQRITPISFTFSALFSAVTNLTLGTQLHAHALLLGFASDIFVN 146
G + E+L ++ R ++ +P + S+ A + L + F F+
Sbjct: 122 HHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLD------GRGRWMVFQLQSFL- 174
Query: 147 NTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKV 206
VKSG FD RDV T LI Y ++G+++ AR +FD L K V
Sbjct: 175 -------VKSG--------FD----RDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTV 215
Query: 207 AWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIA 266
WT M++G + +L+ F L E + D L+ +SAC+ L + + A
Sbjct: 216 TWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIH--A 273
Query: 267 ESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARA 326
+G + + + L+D Y KCG V A+ +F GM +N ++++++ G+ + +
Sbjct: 274 HILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKE 333
Query: 327 AIKLFYEMLETEIKPNHVTFVGVLVAC 353
A++LF M + +KP+ +L +C
Sbjct: 334 AMELFTSMSKFGLKPDMYACSSILTSC 360
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 177/569 (31%), Positives = 276/569 (48%), Gaps = 89/569 (15%)
Query: 5 RRALEWQVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYP 64
R LE + +L C ++ + +Q+ A + H++ + +++I + L +Y
Sbjct: 33 RGDLERDFLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAV--------ELGDFNYS 84
Query: 65 RLLFSQVPSPNPFLYSALIRAYT-LRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN 123
LFS PN + ++ +IR T AL LY M+ + P FT++ +F A
Sbjct: 85 SFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAK 144
Query: 124 LT---LGTQLHAHALLLGFASDIFVN-------------------------------NTM 149
L +G +H+ +G D+ +N N+M
Sbjct: 145 LEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSM 204
Query: 150 IKMYVKSGCLDSARKVFDEMPQ-------RDVVSW------------------------- 177
I Y ++G A +F +M + R +VS
Sbjct: 205 ISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKI 264
Query: 178 -------TELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRC 230
++LI+ Y + GD++SAR +F+++ KD+VAWTAM+T Y+QN EA + F
Sbjct: 265 GLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFE 324
Query: 231 LREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKC 290
+ + G+ D TL+ +SAC +GA + + +S N+ V + LVDMY KC
Sbjct: 325 MEKTGVSPDAGTLSTVLSACGSVGALELGKQIE--THASELSLQHNIYVATGLVDMYGKC 382
Query: 291 GNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVL 350
G VEEA VF M +N T+++MI +A G A+ A+ LF M + P+ +TF+GVL
Sbjct: 383 GRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVL 439
Query: 351 VACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPN 410
AC HAGLV QG F M +G+VP +HY + DLL RAG L++A + +E P +P+
Sbjct: 440 SACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPD 499
Query: 411 GAVWGALLGASHVHGNPDVAEIVSRHLFEL-EPNNIGNYLLLSNTYASAGRWDDVSRVRK 469
+ A+LGA H + + E R L E+ E N GNY++ SN A WD+ +++R
Sbjct: 500 EIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRA 559
Query: 470 LMRDKNLKKNPGYSWVESRNGVIHEFLAG 498
LMRD+ + K PG SW+E G + EFLAG
Sbjct: 560 LMRDRGVVKTPGCSWIEI-EGELMEFLAG 587
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 279 bits (713), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 159/457 (34%), Positives = 247/457 (54%), Gaps = 17/457 (3%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL 126
+F ++ + ++A+I A+ G E L L+ SM RI P FTF ++ A T +L
Sbjct: 439 VFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSL 498
Query: 127 GTQLHAHALLL--GFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAY 184
G + H+ ++ G AS+ V ++I MY K G ++ A K+ QR VS
Sbjct: 499 GYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS-------- 550
Query: 185 ARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLA 244
G M ++ ++ + V+W ++++GY ++A F + E G+ D+ T A
Sbjct: 551 ---GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYA 607
Query: 245 GAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK 304
+ CA L ++ + A+ +V + S LVDMYSKCG++ ++ +F
Sbjct: 608 TVLDTCANLASAGLGKQIH--AQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSL 665
Query: 305 ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQY 364
R+ T+++MI G+A HG+ AI+LF M+ IKPNHVTF+ +L AC H GL+D+G
Sbjct: 666 RRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE 725
Query: 365 LFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVH 424
F M+ YG+ P HY+ M D+LG++G +++AL+L+ MP E + +W LLG +H
Sbjct: 726 YFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIH 785
Query: 425 -GNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYS 483
N +VAE + L L+P + Y LLSN YA AG W+ VS +R+ MR LKK PG S
Sbjct: 786 RNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCS 845
Query: 484 WVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLK 520
WVE ++ +H FL GD HP EI + L + +K
Sbjct: 846 WVELKDE-LHVFLVGDKAHPRWEEIYEELGLIYSEMK 881
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 135/258 (52%), Gaps = 5/258 (1%)
Query: 99 YTSMRNQRITPISFTFSALFSAVTN---LTLGTQLHAHALLLGFASDIFVNNTMIKMYVK 155
+T NQ + + FS +F L LG Q HAH ++ GF FV N ++++Y
Sbjct: 36 FTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTN 95
Query: 156 SGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGY 215
S SA VFD+MP RDVVSW ++I Y+++ DM A F+ + V+D V+W +M++GY
Sbjct: 96 SRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGY 155
Query: 216 AQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPAR 275
QN +++E F + G+E D T A + C+ L + + I G
Sbjct: 156 LQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDT-- 213
Query: 276 NVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEML 335
+V+ SAL+DMY+K E+ VF+G+ E+N+ ++S++I G + A+K F EM
Sbjct: 214 DVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQ 273
Query: 336 ETEIKPNHVTFVGVLVAC 353
+ + + VL +C
Sbjct: 274 KVNAGVSQSIYASVLRSC 291
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 160/338 (47%), Gaps = 38/338 (11%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALF---SAVTN 123
+F +P N +SA+I + AL+ + M+ ++++ +A++
Sbjct: 237 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 296
Query: 124 LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
L LG QLHAHAL FA+D V + MY
Sbjct: 297 LRLGGQLHAHALKSDFAADGIVRTATLDMY------------------------------ 326
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
A+ +M A+ LFD + ++ ++ AM+TGY+Q +AL F L +G+ DE++L
Sbjct: 327 -AKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISL 385
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
+G ACA + + + +A S + +V V +A +DMY KC + EA+ VF M
Sbjct: 386 SGVFRACALVKGLSEGLQIYGLAIKSSL--SLDVCVANAAIDMYGKCQALAEAFRVFDEM 443
Query: 304 KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQ 363
+ R+A +++++I +G+ + LF ML + I+P+ TF +L ACT G + G
Sbjct: 444 RRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGM 502
Query: 364 YLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQL 401
+ S++ G+ ++ + D+ + G +E+A ++
Sbjct: 503 EIHSSIVKS-GMASNSSVGCSLIDMYSKCGMIEEAEKI 539
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 195/467 (41%), Gaps = 82/467 (17%)
Query: 14 SILNTC---TTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
S+L +C + LR QLHAH + + + T L + ++LF
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATL----DMYAKCDNMQDAQILFDN 341
Query: 71 VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTNLTLG 127
+ N Y+A+I Y+ +AL L+ + + + + S +F A V L+ G
Sbjct: 342 SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEG 401
Query: 128 TQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARN 187
Q++ A+ + D+ V N I MY K L A +VFDEM +RD VSW +I A+ +N
Sbjct: 402 LQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQN 461
Query: 188 GDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAI 247
G GY E L F + + +E DE T +
Sbjct: 462 G------------------------KGY-------ETLFLFVSMLRSRIEPDEFTFGSIL 490
Query: 248 SACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAY---------- 297
AC + I +S G A N VG +L+DMYSKCG +EEA
Sbjct: 491 KACTGGSLGYGMEIHSSIVKS---GMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRA 547
Query: 298 NVFRGMKERNAF----------TYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFV 347
NV M+E +++S+I G+ + ++ A LF M+E I P+ T+
Sbjct: 548 NVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYA 607
Query: 348 GVLVACTH---AGLVDQ--GQYLFSNMEGCYGVVPSADHYAC--MADLLGRAGHLEKALQ 400
VL C + AGL Q Q + ++ +D Y C + D+ + G L +
Sbjct: 608 TVLDTCANLASAGLGKQIHAQVIKKELQ--------SDVYICSTLVDMYSKCGDLHDSRL 659
Query: 401 LVETMPVEPNGAVWGALLGASHVHGNPDVA-EIVSRHLFE-LEPNNI 445
+ E + + W A++ HG + A ++ R + E ++PN++
Sbjct: 660 MFEK-SLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHV 705
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 89/438 (20%), Positives = 188/438 (42%), Gaps = 73/438 (16%)
Query: 22 LRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTT---------FPHLPIH---SYPRLL-- 67
L KQ HAH+ +++++ LL+ T + F +P+ S+ +++
Sbjct: 64 LELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMING 123
Query: 68 -------------FSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTF 114
F+ +P + +++++ Y G +++ ++ M + I TF
Sbjct: 124 YSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTF 183
Query: 115 SALF---SAVTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQ 171
+ + S + + +LG Q+H + V+ GC
Sbjct: 184 AIILKVCSFLEDTSLGMQIHG-------------------IVVRVGC------------D 212
Query: 172 RDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCL 231
DVV+ + L+ YA+ + +F + K+ V+W+A++ G QN + AL+FF+ +
Sbjct: 213 TDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEM 272
Query: 232 REAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCG 291
++ + A + +CA L + + A S F A + +V +A +DMY+KC
Sbjct: 273 QKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDF--AADGIVRTATLDMYAKCD 330
Query: 292 NVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLV 351
N+++A +F + N +Y++MI G++ A+ LF+ ++ + + + ++ GV
Sbjct: 331 NMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFR 390
Query: 352 ACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMA----DLLGRAGHLEKALQLVETMPV 407
AC + +G ++ + S C+A D+ G+ L +A ++ + M
Sbjct: 391 ACALVKGLSEGLQIYG-----LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR- 444
Query: 408 EPNGAVWGALLGASHVHG 425
+ W A++ A +G
Sbjct: 445 RRDAVSWNAIIAAHEQNG 462
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 16/231 (6%)
Query: 14 SILNTCTTLRRA---KQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
++L+TC L A KQ+HA + + L YI + L+ + +H RL+F +
Sbjct: 608 TVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGD---LHD-SRLMFEK 663
Query: 71 VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQL 130
+ ++A+I Y G EA++L+ M + I P TF ++ A ++ L +
Sbjct: 664 SLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKG 723
Query: 131 HAHALLL----GFASDIFVNNTMIKMYVKSGCLDSARKVFDEMP-QRDVVSWTELI---T 182
+ ++ G + + M+ + KSG + A ++ EMP + D V W L+ T
Sbjct: 724 LEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCT 783
Query: 183 AYARNGDM-NSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLR 232
+ N ++ A LD +D A+T + YA M ++ + R +R
Sbjct: 784 IHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMR 834
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 171/586 (29%), Positives = 286/586 (48%), Gaps = 81/586 (13%)
Query: 10 WQVVSILNTCTTLRRAK---QLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRL 66
+ +VS L C AK ++HA + + + H S + N L + T +P
Sbjct: 285 YTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMP---QAER 341
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTN 123
+ Q+ + + +++LI+ Y + EAL ++ M + +++ +A ++N
Sbjct: 342 ILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSN 401
Query: 124 LTLGTQLHAHALLLGFASDIFVNN-------------------------------TMIKM 152
L G +LHA+ + G+ S++ V N T+I
Sbjct: 402 LLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAG 461
Query: 153 YVKSGCLDSARKVFDEMPQR--------------------------------------DV 174
Y ++ C A ++F ++ ++ D
Sbjct: 462 YAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDT 521
Query: 175 VSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREA 234
V EL+ Y + +M A +F+ + KD V+WT+M++ A N EA+E FR + E
Sbjct: 522 VIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVET 581
Query: 235 GMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVE 294
G+ D V L +SA A L A + C GF ++ V A+VDMY+ CG+++
Sbjct: 582 GLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAV--AVVDMYACCGDLQ 639
Query: 295 EAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACT 354
A VF ++ + Y+SMI + +HG +AA++LF +M + P+H++F+ +L AC+
Sbjct: 640 SAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACS 699
Query: 355 HAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVW 414
HAGL+D+G+ ME Y + P +HY C+ D+LGRA + +A + V+ M EP VW
Sbjct: 700 HAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVW 759
Query: 415 GALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDK 474
ALL A H ++ EI ++ L ELEP N GN +L+SN +A GRW+DV +VR M+
Sbjct: 760 CALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKAS 819
Query: 475 NLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLK 520
++K+PG SW+E +G +H+F A D HPE EI + L ++ +L+
Sbjct: 820 GMEKHPGCSWIE-MDGKVHKFTARDKSHPESKEIYEKLSEVTRKLE 864
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 199/436 (45%), Gaps = 52/436 (11%)
Query: 14 SILNTCTTLRRAK---QLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
++L C LR + +LH+ + + H + +I+ L+ + + S R LF
Sbjct: 187 ALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALV----SMYAKNDDLSAARRLFDG 242
Query: 71 VPSP-NPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT---L 126
+ L+++++ +Y+ G E L L+ M P S+T + +A + L
Sbjct: 243 FQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKL 302
Query: 127 GTQLHAHALLLG-FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYA 185
G ++HA L +S+++V N +I MY + G +MPQ
Sbjct: 303 GKEIHASVLKSSTHSSELYVCNALIAMYTRCG----------KMPQ-------------- 338
Query: 186 RNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
A + +++ D V W +++ GY QN M KEALEFF + AG ++DEV++
Sbjct: 339 -------AERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTS 391
Query: 246 AISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE 305
I+A +L S + A G N+ VG+ L+DMYSKC F M +
Sbjct: 392 IIAASGRL--SNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD 449
Query: 306 RNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACT--HAGLVDQGQ 363
++ +++++I G+A + A++LF ++ + ++ + + +L A + + L+ +
Sbjct: 450 KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEI 509
Query: 364 YLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHV 423
+ +G V + + D+ G+ ++ A ++ E++ + + W +++ +S +
Sbjct: 510 HCHILRKGLLDTVIQNE----LVDVYGKCRNMGYATRVFESIKGK-DVVSWTSMISSSAL 564
Query: 424 HGNPDVAEIVSRHLFE 439
+GN A + R + E
Sbjct: 565 NGNESEAVELFRRMVE 580
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 155/350 (44%), Gaps = 52/350 (14%)
Query: 15 ILNTCTTLR---RAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
+L C R + +QLH+ I++ S+ + L L + +F ++
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTF---PSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM 142
Query: 72 PSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL---TLGT 128
P F ++ +I AY G AL LY +MR + + +F AL A L G+
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGS 202
Query: 129 QLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR-DVVSWTELITAYARN 187
+LH+ + LG+ S F+ N ++ MY K+ L +AR++FD ++ D V W ++++Y+ +
Sbjct: 203 ELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTS 262
Query: 188 GDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAI 247
G E LE FR + G + T+ A+
Sbjct: 263 GK-------------------------------SLETLELFREMHMTGPAPNSYTIVSAL 291
Query: 248 SAC-----AQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
+AC A+LG A ++ SS + V +AL+ MY++CG + +A + R
Sbjct: 292 TACDGFSYAKLGKEIHASVLKSSTHSS------ELYVCNALIAMYTRCGKMPQAERILRQ 345
Query: 303 MKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVA 352
M + T++S+I G+ + + A++ F +M+ K + V+ ++ A
Sbjct: 346 MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 167/404 (41%), Gaps = 75/404 (18%)
Query: 42 YIITNLLRHLTTTFPHLPIHSYPRL-LFSQVPSP-----NPFLYS------ALIRAYTLR 89
Y +TN+ R L+ S+PR+ L +P+ NPF S +
Sbjct: 3 YAVTNM-RLLSNMMYSASAISFPRVRLHCSIPTEPSCRRNPFRQSNQPVQVPSPKLACFD 61
Query: 90 GPFTEAL-RLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHAHAL--LLGFASDIFVN 146
G TEA RL S N + ++ L ++ G QLH+ F D F+
Sbjct: 62 GVLTEAFQRLDVSENNSPVEAFAYVLE-LCGKRRAVSQGRQLHSRIFKTFPSFELD-FLA 119
Query: 147 NTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKV 206
++ MY K G LD A KVFDEMP R +W +I AY NG+
Sbjct: 120 GKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGE----------------- 162
Query: 207 AWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQL-----GASKDADW 261
P AL + +R G+ + + ACA+L G+ +
Sbjct: 163 --------------PASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLL 208
Query: 262 VRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER-NAFTYSSMIVGFAI 320
V+ S+GF + +ALV MY+K ++ A +F G +E+ +A ++S++ ++
Sbjct: 209 VKLGYHSTGF-------IVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261
Query: 321 HGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSAD 380
G++ ++LF EM T PN T V L AC G+ + ++ V+ S+
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHAS------VLKSST 315
Query: 381 H----YACMA--DLLGRAGHLEKALQLVETMPVEPNGAVWGALL 418
H Y C A + R G + +A +++ M + W +L+
Sbjct: 316 HSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 275 bits (702), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 160/524 (30%), Positives = 283/524 (54%), Gaps = 27/524 (5%)
Query: 12 VVSILNTC---TTLRRAKQLHAHIYRHNLHQSSYII--TNLLRHLTTTFPHLPIHSYPRL 66
++SIL C T L K++H++I RH SY++ T++ L + + S
Sbjct: 333 IISILPVCAQLTDLASGKEIHSYILRH-----SYLLEDTSVGNALISFYARFGDTSAAYW 387
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT- 125
FS + + + ++A++ A+ + L L + N+ IT S T +L N+
Sbjct: 388 AFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQG 447
Query: 126 LGT--QLHAHALLLGFASD---IFVNNTMIKMYVKSGCLDSARKVFDEMPQR-DVVSWTE 179
+G ++H +++ G D + N ++ Y K G ++ A K+F + +R +VS+
Sbjct: 448 IGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNS 507
Query: 180 LITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETD 239
L++ Y +G + A+ LF E+ D W+ MV YA++ P EA+ FR ++ GM +
Sbjct: 508 LLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPN 567
Query: 240 EVTLAGAISACAQLGASKDADWVRCIAESSGF---GPARNVLVGSALVDMYSKCGNVEEA 296
VT+ + CAQL + + + + G+ G ++ + L+D+Y+KCG+++ A
Sbjct: 568 TVTIMNLLPVCAQLAS------LHLVRQCHGYIIRGGLGDIRLKGTLLDVYAKCGSLKHA 621
Query: 297 YNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHA 356
Y+VF+ R+ +++M+ G+A+HGR + A+ ++ M E+ IKP+HV +L AC HA
Sbjct: 622 YSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHA 681
Query: 357 GLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGA 416
GL+ G ++ ++ +G+ P+ + YAC DL+ R G L+ A V MPVEPN +WG
Sbjct: 682 GLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGT 741
Query: 417 LLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNL 476
LL A + D+ V+ HL + E ++ GN++L+SN YA+ +W+ V +R LM+ K +
Sbjct: 742 LLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEM 801
Query: 477 KKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLK 520
KK G SW+E +G + F++GD HP + I ++ L ++K
Sbjct: 802 KKPAGCSWLEV-DGQRNVFVSGDCSHPRRDSIFDLVNALYLQMK 844
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 113/225 (50%), Gaps = 9/225 (4%)
Query: 135 LLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTEL----ITAYARNGDM 190
LL GF +D V ++K L S R + + + ++ +E+ + YA+ M
Sbjct: 13 LLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRM 72
Query: 191 NSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGM-ETDEVTLAGAISA 249
+ +++F ++D D V W ++TG + + +E + FF+ + A + VT A +
Sbjct: 73 DDCQKMFRQMDSLDPVVWNIVLTGLSVSC-GRETMRFFKAMHFADEPKPSSVTFAIVLPL 131
Query: 250 CAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNV-EEAYNVFRGMKERNA 308
C +LG S + + +G ++ LVG+ALV MY+K G + +AY F G+ +++
Sbjct: 132 CVRLGDSYNGKSMHSYIIKAGL--EKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDV 189
Query: 309 FTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVAC 353
+++++I GF+ + A + F ML+ +PN+ T VL C
Sbjct: 190 VSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVC 234
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 132/309 (42%), Gaps = 40/309 (12%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMR-NQRITPISFTFSALFSAVTNLT 125
+F Q+ S +P +++ ++ ++ E +R + +M P S TF+ + L
Sbjct: 78 MFRQMDSLDPVVWNIVLTGLSVSCG-RETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLG 136
Query: 126 L---GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELIT 182
G +H++ + G D V N ++ MY K G +
Sbjct: 137 DSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFI----------------------- 173
Query: 183 AYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
A FD + KD V+W A++ G+++N M +A F + + E + T
Sbjct: 174 -------FPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYAT 226
Query: 243 LAGAISACAQLG---ASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNV 299
+A + CA + A + + + +V V ++LV Y + G +EEA ++
Sbjct: 227 IANVLPVCASMDKNIACRSGRQIHSYVVQRSW-LQTHVFVCNSLVSFYLRVGRIEEAASL 285
Query: 300 FRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEML-ETEIKPNHVTFVGVLVACTHAGL 358
F M ++ +++ +I G+A + A +LF+ ++ + ++ P+ VT + +L C
Sbjct: 286 FTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTD 345
Query: 359 VDQGQYLFS 367
+ G+ + S
Sbjct: 346 LASGKEIHS 354
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/302 (19%), Positives = 124/302 (41%), Gaps = 41/302 (13%)
Query: 25 AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIR 84
K +H++I + L + + ++ N L + F + +Y F + + ++A+I
Sbjct: 141 GKSMHSYIIKAGLEKDT-LVGNALVSMYAKFGFIFPDAYTA--FDGIADKDVVSWNAIIA 197
Query: 85 AYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL------GTQLHAHALLLG 138
++ +A R + M + P T + + ++ G Q+H++ +
Sbjct: 198 GFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRS 257
Query: 139 F-ASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELF 197
+ + +FV N+++ Y++ G ++ A +F M +D+VSW +I YA N + A +LF
Sbjct: 258 WLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLF 317
Query: 198 DELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASK 257
L + + + D VT+ + CAQL
Sbjct: 318 HNL------------------------------VHKGDVSPDSVTIISILPVCAQLTDLA 347
Query: 258 DADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVG 317
+ + + VG+AL+ Y++ G+ AY F M ++ ++++++
Sbjct: 348 SGKEIHSYILRHSY-LLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDA 406
Query: 318 FA 319
FA
Sbjct: 407 FA 408
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 275 bits (702), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 166/508 (32%), Positives = 264/508 (51%), Gaps = 46/508 (9%)
Query: 14 SILNTCTTL---RRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
S+L++C + R K +H R L + ++ L L L S +
Sbjct: 308 SVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKL---SDCETVLRV 364
Query: 71 VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN---LTLG 127
V N +++LI Y RG +AL L+ M QRI P +FT ++ SA N + LG
Sbjct: 365 VSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLG 424
Query: 128 TQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARN 187
Q+H H + SD FV N++I MY KS
Sbjct: 425 KQIHGHVIRTD-VSDEFVQNSLIDMYSKS------------------------------- 452
Query: 188 GDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAI 247
G ++SA +F+++ + V W +M+ G++QN EA+ F + + +E +EVT I
Sbjct: 453 GSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVI 512
Query: 248 SACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERN 307
AC+ +G+ + WV SG +++ +AL+DMY+KCG++ A VFR M R+
Sbjct: 513 QACSSIGSLEKGKWVHHKLIISGL---KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRS 569
Query: 308 AFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFS 367
++SSMI + +HGR +AI F +M+E+ KPN V F+ VL AC H+G V++G+Y F
Sbjct: 570 IVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYF- 628
Query: 368 NMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNP 427
N+ +GV P+++H+AC DLL R+G L++A + ++ MP + +VWG+L+ +H
Sbjct: 629 NLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKM 688
Query: 428 DVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVES 487
D+ + + L ++ ++ G Y LLSN YA G W++ R+R M+ NLKK PGYS +E
Sbjct: 689 DIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEI 748
Query: 488 RNGVIHEFLAGDVKHPEINEIKKALDDL 515
V F AG+ + +EI + L +L
Sbjct: 749 DQKVFR-FGAGEENRIQTDEIYRFLGNL 775
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 170/358 (47%), Gaps = 42/358 (11%)
Query: 11 QVVSILNTCTTLRRAKQLHAHIY-RHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFS 69
Q + + +C++LR QLHAH+ L + +T L+ + F P S RL+F
Sbjct: 3 QYMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIE--SYAFMGSPDSS--RLVFE 58
Query: 70 QVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT----NLT 125
P P+ F+Y LI+ A+ LY + ++ F F ++ A +L+
Sbjct: 59 AFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLS 118
Query: 126 LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYA 185
+G ++H +K G D D V T L+ Y
Sbjct: 119 VGGKVHGR-------------------IIKGGVDD------------DAVIETSLLCMYG 147
Query: 186 RNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
+ G+++ A ++FD + V+D VAW+ +V+ +N +AL F+C+ + G+E D VT+
Sbjct: 148 QTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMIS 207
Query: 246 AISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE 305
+ CA+LG + A V F + ++L+ MYSKCG++ + +F + +
Sbjct: 208 VVEGCAELGCLRIARSVHGQITRKMFDLDETLC--NSLLTMYSKCGDLLSSERIFEKIAK 265
Query: 306 RNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQ 363
+NA ++++MI + + A++ F EM+++ I+PN VT VL +C GL+ +G+
Sbjct: 266 KNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGK 323
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 160/360 (44%), Gaps = 45/360 (12%)
Query: 14 SILNTCTTLRR----AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFS 69
S+L C R ++H I + + + I T+LL + S +F
Sbjct: 105 SVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLL----CMYGQTGNLSDAEKVFD 160
Query: 70 QVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQ 129
+P + +S L+ + G +ALR++ M + + P + T ++ L
Sbjct: 161 GMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAEL----- 215
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYA 185
GCL AR V ++ ++ D L+T Y+
Sbjct: 216 ---------------------------GCLRIARSVHGQITRKMFDLDETLCNSLLTMYS 248
Query: 186 RNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
+ GD+ S+ +F+++ K+ V+WTAM++ Y + ++AL F + ++G+E + VTL
Sbjct: 249 KCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYS 308
Query: 246 AISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE 305
+S+C +G ++ V A P L ALV++Y++CG + + V R + +
Sbjct: 309 VLSSCGLIGLIREGKSVHGFAVRRELDPNYESL-SLALVELYAECGKLSDCETVLRVVSD 367
Query: 306 RNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYL 365
RN ++S+I +A G A+ LF +M+ IKP+ T + AC +AGLV G+ +
Sbjct: 368 RNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQI 427
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 161/401 (40%), Gaps = 72/401 (17%)
Query: 114 FSALFSAVTNLTLGTQLHAHALLLG-FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR 172
+ LF + ++L L +QLHAH L+ G D +I+ Y G DS+R VF+ P
Sbjct: 4 YMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP 63
Query: 173 DVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLR 232
D + LI +++A +L+ L V+ T ++ + F LR
Sbjct: 64 DSFMYGVLIKCNVWCHLLDAAIDLYHRL-----VSETTQISKFV----------FPSVLR 108
Query: 233 EAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGN 292
+ +++ G + G D + ++ ++L+ MY + GN
Sbjct: 109 ACAGSREHLSVGGKVHGRIIKGGVDD-----------------DAVIETSLLCMYGQTGN 151
Query: 293 VEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVA 352
+ +A VF GM R+ +S+++ +G A+++F M++ ++P+ VT + V+
Sbjct: 152 LSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEG 211
Query: 353 CTHAGLVD-----QGQY--------------LFSNMEGCYGVVPS-----------ADHY 382
C G + GQ L + C ++ S A +
Sbjct: 212 CAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSW 271
Query: 383 ACMADLLGRAGHLEKALQLVETM---PVEPNGAVWGALLGASHVHGNPDVAEIVSRHLF- 438
M R EKAL+ M +EPN ++L + + G + E S H F
Sbjct: 272 TAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGL--IREGKSVHGFA 329
Query: 439 ---ELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNL 476
EL+PN L L YA G+ D V +++ D+N+
Sbjct: 330 VRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNI 370
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 151/510 (29%), Positives = 266/510 (52%), Gaps = 42/510 (8%)
Query: 22 LRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPS-PNPFLYS 80
L K++H ++ Y+ + L+ T++ + +F ++P + L++
Sbjct: 176 LSDVKKVHGLAFKLGFDSDCYVGSGLV----TSYSKFMSVEDAQKVFDELPDRDDSVLWN 231
Query: 81 ALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT---NLTLGTQLHAHALLL 137
AL+ Y+ F +AL +++ MR + + T +++ SA T ++ G +H A+
Sbjct: 232 ALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKT 291
Query: 138 GFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELF 197
G SDI V+N +I MY KS L+ A +F+ M +RD+ +W ++ + GD + LF
Sbjct: 292 GSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALF 351
Query: 198 DELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASK 257
+ + C +G+ D VTL + C +L + +
Sbjct: 352 ERM----------------------------LC---SGIRPDIVTLTTVLPTCGRLASLR 380
Query: 258 DADWVRCIAESSGF--GPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMI 315
+ SG + N + ++L+DMY KCG++ +A VF M+ +++ +++ MI
Sbjct: 381 QGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMI 440
Query: 316 VGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGV 375
G+ + A+ +F M +KP+ +TFVG+L AC+H+G +++G+ + ME Y +
Sbjct: 441 NGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNI 500
Query: 376 VPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSR 435
+P++DHYAC+ D+LGRA LE+A +L + P+ N VW ++L + +HGN D+A + +
Sbjct: 501 LPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGK 560
Query: 436 HLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEF 495
L ELEP + G Y+L+SN Y AG++++V VR MR +N+KK PG SW+ +NGV H F
Sbjct: 561 RLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGV-HTF 619
Query: 496 LAGDVKHPEINEIKKALDDLLERLKAIGYL 525
G+ HPE I L ++ + Y+
Sbjct: 620 FTGNQTHPEFKSIHDWLSLVISHMHGHEYM 649
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 165/360 (45%), Gaps = 40/360 (11%)
Query: 77 FLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLG--TQLHAHA 134
F Y+ALI + + G +A+ Y MR I P +TF +L + L ++H A
Sbjct: 127 FGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVHGLA 186
Query: 135 LLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSAR 194
LGF SD YV SG L+T+Y++ + A+
Sbjct: 187 FKLGFDSDC---------YVGSG----------------------LVTSYSKFMSVEDAQ 215
Query: 195 ELFDEL-DVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQL 253
++FDEL D D V W A+V GY+Q ++AL F +RE G+ T+ +SA
Sbjct: 216 KVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVS 275
Query: 254 GASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSS 313
G + + +A +G G +++V +AL+DMY K +EEA ++F M ER+ FT++S
Sbjct: 276 GDIDNGRSIHGLAVKTGSGS--DIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNS 333
Query: 314 MIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNM--EG 371
++ G + LF ML + I+P+ VT VL C + QG+ + M G
Sbjct: 334 VLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSG 393
Query: 372 CYGVVPSADH-YACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVA 430
S + + + D+ + G L A + ++M V+ + A W ++ V ++A
Sbjct: 394 LLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVK-DSASWNIMINGYGVQSCGELA 452
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 280 GSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEI 339
G++LV+MY+KCG + A VF G ER+ F Y+++I GF ++G A++ + EM I
Sbjct: 99 GTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGI 157
Query: 340 KPNHVTFVGVLVACTHAGLVDQGQ-----YLFSNMEGCY---GVVPSADHYACMADLLGR 391
P+ TF +L L D + + CY G+V S +
Sbjct: 158 LPDKYTFPSLLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFM-------- 209
Query: 392 AGHLEKALQLVETMPVEPNGAVWGALL-GASHVHGNPDVAEIVSR 435
+E A ++ + +P + +W AL+ G S + D + S+
Sbjct: 210 --SVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSK 252
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/495 (33%), Positives = 278/495 (56%), Gaps = 24/495 (4%)
Query: 134 ALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARN-----G 188
A LL S ++ ++ ++ V CL ++ + +V+ TE+ TA +
Sbjct: 262 ATLLNICSSLYKSSDLVPNEVSKCCL----QLHSLTVKSGLVTQTEVATALIKVYSEMLE 317
Query: 189 DMNSARELFDELD-VKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAI 247
D +LF E+ +D VAW ++T +A P+ A+ F LR+ + D T + +
Sbjct: 318 DYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVL 376
Query: 248 SACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERN 307
ACA L ++ A + GF + ++ ++L+ Y+KCG+++ VF M R+
Sbjct: 377 KACAGLVTARHALSIHAQVIKGGF--LADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRD 434
Query: 308 AFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFS 367
+++SM+ +++HG+ + + +F +M +I P+ TF+ +L AC+HAG V++G +F
Sbjct: 435 VVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFR 491
Query: 368 NMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNP 427
+M +P +HYAC+ D+L RA +A ++++ MP++P+ VW ALLG+ HGN
Sbjct: 492 SMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNT 551
Query: 428 DVAEIVSRHLFEL-EPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVE 486
+ ++ + L EL EP N +Y+ +SN Y + G +++ + K M ++K P SW E
Sbjct: 552 RLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTE 611
Query: 487 SRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFL-LM 545
N V HEF +G P+ + + L L+ LK +GY+P + S DI D+E+ L+
Sbjct: 612 IGNKV-HEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLL 670
Query: 546 AHSEKLALAFGLL----NTDAG-STIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMR 600
HSEKLALAF ++ ++D G + I+IMKN RIC DCH M ASK+ G++I++RD+ R
Sbjct: 671 HHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNR 730
Query: 601 FHHFLNGACSCGDFW 615
FHHF + +CSC D+W
Sbjct: 731 FHHFKDSSCSCNDYW 745
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 114/236 (48%), Gaps = 19/236 (8%)
Query: 14 SILNTCTTLRRAK------------QLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIH 61
++LN C++L ++ QLH+ + L + + T L++ +
Sbjct: 263 TLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYT-- 320
Query: 62 SYPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV 121
+L + ++ +I A+ + P A+ L+ +R ++++P +TFS++ A
Sbjct: 321 DCYKLFMEMSHCRDIVAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKAC 379
Query: 122 TNLTLGTQ---LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWT 178
L +HA + GF +D +NN++I Y K G LD +VFD+M RDVVSW
Sbjct: 380 AGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWN 439
Query: 179 ELITAYARNGDMNSARELFDELDVK-DKVAWTAMVTGYAQNAMPKEALEFFRCLRE 233
++ AY+ +G ++S +F ++D+ D + A+++ + +E L FR + E
Sbjct: 440 SMLKAYSLHGQVDSILPVFQKMDINPDSATFIALLSACSHAGRVEEGLRIFRSMFE 495
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 128/311 (41%), Gaps = 56/311 (18%)
Query: 51 LTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPI 110
+ T+ + + R S +PS + +R G A+ L+ S P+
Sbjct: 1 MITSLSQISFGTLRRFGSSVLPSALKREFVEGLRTLVRSGDIRRAVSLFYS------APV 54
Query: 111 SF----TFSALFSAVT---NLTLGTQLHAHALL--LGFASDIFVNNTMIKMYVKSGCLDS 161
++ALF A NL G LH H L ++ ++ + N +I MY K G +
Sbjct: 55 ELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILY 114
Query: 162 ARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMP 221
AR+VFD MP+R+VVSWT LIT Y + G+ LF + + P
Sbjct: 115 ARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM---------------LSHCFP 159
Query: 222 KEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGS 281
+E TL+ +++C + V +A G + + V +
Sbjct: 160 -----------------NEFTLSSVLTSCRY----EPGKQVHGLALKLGLHCS--IYVAN 196
Query: 282 ALVDMYSKCGN---VEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETE 338
A++ MY +C + EA+ VF +K +N T++SMI F + AI +F M
Sbjct: 197 AVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDG 256
Query: 339 IKPNHVTFVGV 349
+ + T + +
Sbjct: 257 VGFDRATLLNI 267
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 274 ARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYE 333
++NV++ + L++MY+KCGN+ A VF M ERN +++++I G+ G + LF
Sbjct: 93 SQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSS 152
Query: 334 MLETEIKPNHVTFVGVLVACTH 355
ML + PN T VL +C +
Sbjct: 153 ML-SHCFPNEFTLSSVLTSCRY 173
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 271 bits (694), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 152/505 (30%), Positives = 258/505 (51%), Gaps = 11/505 (2%)
Query: 25 AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIR 84
A+Q+H + R ++ ++ + T I S R +F ++ + ++++I
Sbjct: 151 ARQVHGFVIRGGFDSDVFVGNGMITYYTKC---DNIES-ARKVFDEMSERDVVSWNSMIS 206
Query: 85 AYTLRGPFTEALRLYTSMRN-QRITPISFTFSALFSAV---TNLTLGTQLHAHALLLGFA 140
Y+ G F + ++Y +M P T ++F A ++L G ++H +
Sbjct: 207 GYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQ 266
Query: 141 SDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDEL 200
D+ + N +I Y K G LD AR +FDEM ++D V++ +I+ Y +G + A LF E+
Sbjct: 267 MDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEM 326
Query: 201 DVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDAD 260
+ W AM++G QN +E + FR + G + VTL+ + + K
Sbjct: 327 ESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGK 386
Query: 261 WVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAI 320
+ A +G N+ V ++++D Y+K G + A VF K+R+ ++++I +A+
Sbjct: 387 EIHAFAIRNG--ADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAV 444
Query: 321 HGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSAD 380
HG + +A LF +M KP+ VT VL A H+G D Q++F +M Y + P +
Sbjct: 445 HGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVE 504
Query: 381 HYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFEL 440
HYACM +L RAG L A++ + MP++P VWGALL + V G+ ++A LFE+
Sbjct: 505 HYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEM 564
Query: 441 EPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDV 500
EP N GNY +++N Y AGRW++ VR M+ LKK PG SW+E+ G + F+A D
Sbjct: 565 EPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKG-LRSFIAKDS 623
Query: 501 KHPEINEIKKALDDLLERLKAIGYL 525
E+ + ++ L+E + Y+
Sbjct: 624 SCERSKEMYEIIEGLVESMSDKEYI 648
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 194/429 (45%), Gaps = 45/429 (10%)
Query: 27 QLHAHIYRHNLHQSSYIITNLLRHLTTT--FPHLPIHSYPRLLFSQVPSPNPFLYSALIR 84
QLHA I ++ +++ + L+ T F +H +F ++ N F Y+AL+
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQ-ALH-----VFDEITVRNAFSYNALLI 96
Query: 85 AYTLRGPFTEALRLYTS------MRNQRITPISFTFSALFSAVTNL------TLGTQLHA 132
AYT R + +A L+ S + P S + S + A++ +L Q+H
Sbjct: 97 AYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHG 156
Query: 133 HALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNS 192
+ GF SD+FV N MI Y K ++SARKVFDEM +RDVVSW +I+ Y+++G
Sbjct: 157 FVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFED 216
Query: 193 ARELFDEL----DVK-DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAI 247
++++ + D K + V ++ Q++ LE + + E ++ D I
Sbjct: 217 CKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVI 276
Query: 248 SACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERN 307
A+ G+ D+ R + + ++ + A++ Y G V+EA +F M+
Sbjct: 277 GFYAKCGS---LDYARALFDEM---SEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIG 330
Query: 308 AFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYL-- 365
T+++MI G + I F EM+ +PN VT +L + T++ + G+ +
Sbjct: 331 LSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHA 390
Query: 366 FSNMEGC----YGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGAS 421
F+ G Y D+YA + LLG Q V + + W A++ A
Sbjct: 391 FAIRNGADNNIYVTTSIIDNYAKLGFLLGA--------QRVFDNCKDRSLIAWTAIITAY 442
Query: 422 HVHGNPDVA 430
VHG+ D A
Sbjct: 443 AVHGDSDSA 451
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 148/462 (32%), Positives = 245/462 (53%), Gaps = 11/462 (2%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT---- 122
+F ++P F ++ +I + G L L+ M P +TFS+L +A +
Sbjct: 160 VFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSS 219
Query: 123 NLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELIT 182
N+ G +HA L G++S + N+++ Y K G D A + + + VSW +I
Sbjct: 220 NVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIID 279
Query: 183 AYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
A + G+ A E+F K+ V WT M+TGY +N ++AL FF + ++G+++D
Sbjct: 280 ACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFA 339
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
+ AC+ L + GF VG+ALV++Y+KCG+++EA F
Sbjct: 340 YGAVLHACSGLALLGHGKMIHGCLIHCGF--QGYAYVGNALVNLYAKCGDIKEADRAFGD 397
Query: 303 MKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQG 362
+ ++ ++++M+ F +HG A A+KL+ M+ + IKP++VTF+G+L C+H+GLV++G
Sbjct: 398 IANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEG 457
Query: 363 QYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVET----MPVEPNGAVWGALL 418
+F +M Y + DH CM D+ GR GHL +A L T + N + W LL
Sbjct: 458 CMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLL 517
Query: 419 GASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKK 478
GA H + ++ VS+ L EP+ +++LLSN Y S GRW + VR+ M ++ +KK
Sbjct: 518 GACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKK 577
Query: 479 NPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLK 520
PG SW+E N V F+ GD HP + E+ + L+ L ++
Sbjct: 578 TPGCSWIEVGNQV-STFVVGDSSHPRLEELSETLNCLQHEMR 618
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 196/424 (46%), Gaps = 51/424 (12%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFS---AV 121
R +F +P + ++ ++ +Y+ G EA+ L+T +R P ++F+A+ S ++
Sbjct: 24 RQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASL 83
Query: 122 TNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEM--PQRDVVSWTE 179
N+ G ++ + + GF + + VNN++I MY K SA KVF +M R+ V+W
Sbjct: 84 GNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCS 143
Query: 180 LITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETD 239
L+ AY +A ++F E+ + AW M++G+A + L F+ + E+ + D
Sbjct: 144 LLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPD 203
Query: 240 EVTLAGAISACAQLGASKDADWVRCI-------AESSGFGPARNVL-----VGS------ 281
T + ++AC+ S + + R + SS +VL +GS
Sbjct: 204 CYTFSSLMNACS--ADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMR 261
Query: 282 --------------ALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAA 327
+++D K G E+A VF E+N T+++MI G+ +G A
Sbjct: 262 ELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQA 321
Query: 328 IKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGC----YGVVPSADHYA 383
++ F EM+++ + +H + VL AC+ L+ G+ + + C Y V +A
Sbjct: 322 LRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNA---- 377
Query: 384 CMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFE--LE 441
+ +L + G +++A + + + W +L A VHG D A + ++ ++
Sbjct: 378 -LVNLYAKCGDIKEADRAFGDI-ANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIK 435
Query: 442 PNNI 445
P+N+
Sbjct: 436 PDNV 439
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 35/214 (16%)
Query: 174 VVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLRE 233
+V T I + A++G + SAR++FD + D VAW M+T Y++ + +EA+ F LR
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 234 AGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNV 293
+ + D+ + +S CA LG K ++ + SGF ++ V ++L+DMY KC +
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGF--CASLPVNNSLIDMYGKCSDT 121
Query: 294 ---------------------------------EEAYNVFRGMKERNAFTYSSMIVGFAI 320
E A +VF M +R AF ++ MI G A
Sbjct: 122 LSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAH 181
Query: 321 HGRARAAIKLFYEMLETEIKPNHVTFVGVLVACT 354
G+ + + LF EMLE+E KP+ TF ++ AC+
Sbjct: 182 CGKLESCLSLFKEMLESEFKPDCYTFSSLMNACS 215
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 158/483 (32%), Positives = 242/483 (50%), Gaps = 46/483 (9%)
Query: 11 QVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
+ +++++ C +L+ KQ+HA I L +Y ++ LL HL++T SY + Q
Sbjct: 11 RCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLL-HLSSTV----CLSYALSILRQ 65
Query: 71 VPSPNPFLYSALIRAYTLRGPFTE---ALRLYT---SMRNQRITPISFTFSALFSA---- 120
+P+P+ FLY+ LI + T+ A LY S R+ + P FT+ +LF A
Sbjct: 66 IPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFD 125
Query: 121 VTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTEL 180
G LHAH L F E D L
Sbjct: 126 AQWHRHGRALHAHVL-----------------------------KFLEPVNHDRFVQAAL 156
Query: 181 ITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
+ YA G + AR LF+ + D W ++ YA + E + +E
Sbjct: 157 VGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNE 216
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
++L I +CA LG W + N VG++L+D+YSKCG + A VF
Sbjct: 217 LSLVALIKSCANLGEFVRGVWAHVYVLKNNL--TLNQFVGTSLIDLYSKCGCLSFARKVF 274
Query: 301 RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVD 360
M +R+ Y++MI G A+HG + I+L+ ++ + P+ TFV + AC+H+GLVD
Sbjct: 275 DEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVD 334
Query: 361 QGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGA 420
+G +F++M+ YG+ P +HY C+ DLLGR+G LE+A + ++ MPV+PN +W + LG+
Sbjct: 335 EGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGS 394
Query: 421 SHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNP 480
S HG+ + EI +HL LE N GNY+LLSN YA RW DV + R+LM+D + K+P
Sbjct: 395 SQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSP 454
Query: 481 GYS 483
G S
Sbjct: 455 GIS 457
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 165/545 (30%), Positives = 282/545 (51%), Gaps = 62/545 (11%)
Query: 22 LRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSA 81
+ KQ HA + + + + T+LL + + + Y ++F ++ + ++
Sbjct: 290 VEEGKQSHAIAIVNGMELDNILGTSLLNF----YCKVGLIEYAEMVFDRMFEKDVVTWNL 345
Query: 82 LIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT---NLTLGTQLHAHALLLG 138
+I Y +G +A+ + MR +++ T + L SA NL LG ++ + +
Sbjct: 346 IISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHS 405
Query: 139 FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYA------------- 185
F SDI + +T++ MY K G + A+KVFD ++D++ W L+ AYA
Sbjct: 406 FESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFY 465
Query: 186 ----------------------RNGDMNSARELFDELD----VKDKVAWTAMVTGYAQNA 219
RNG ++ A+++F ++ + + ++WT M+ G QN
Sbjct: 466 GMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNG 525
Query: 220 MPKEALEFFRCLREAGMETDEVTLAGAISACAQL-----GASKDADWVRCIAESSGFGPA 274
+EA+ F R ++E+G+ + ++ A+SACA L G + +R + SS
Sbjct: 526 CSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSS----- 580
Query: 275 RNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYS-SMIVGFAIHGRARAAIKLFYE 333
V + ++LVDMY+KCG++ +A VF G K + S +MI +A++G + AI L+
Sbjct: 581 -LVSIETSLVDMYAKCGDINKAEKVF-GSKLYSELPLSNAMISAYALYGNLKEAIALYRS 638
Query: 334 MLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAG 393
+ +KP+++T VL AC HAG ++Q +F+++ + P +HY M DLL AG
Sbjct: 639 LEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAG 698
Query: 394 HLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSN 453
EKAL+L+E MP +P+ + +L+ + + ++ + +SR L E EP N GNY+ +SN
Sbjct: 699 ETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISN 758
Query: 454 TYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVE--SRNGVIHEFLAGDVKHPEINEIKKA 511
YA G WD+V ++R++M+ K LKK PG SW++ GV H F+A D H INEI+
Sbjct: 759 AYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGV-HVFVANDKTHTRINEIQMM 817
Query: 512 LDDLL 516
L LL
Sbjct: 818 LALLL 822
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/492 (24%), Positives = 207/492 (42%), Gaps = 57/492 (11%)
Query: 15 ILNTCT---TLRRAKQLHAHIYRHN--LHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFS 69
IL C L KQ+HA I ++ ++ YI T L+ + +LFS
Sbjct: 76 ILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLV----IFYAKCDALEIAEVLFS 131
Query: 70 QVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT---L 126
++ N F ++A+I G AL + M I P +F + A L
Sbjct: 132 KLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRF 191
Query: 127 GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYAR 186
G +H + + G +FV +++ MY K G LD A KV
Sbjct: 192 GRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKV--------------------- 230
Query: 187 NGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGA 246
FDE+ ++ VAW A++ GY QN +EA+ F +R+ G+E VT++
Sbjct: 231 ----------FDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTC 280
Query: 247 ISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER 306
+SA A +G ++ IA +G N+L G++L++ Y K G +E A VF M E+
Sbjct: 281 LSASANMGGVEEGKQSHAIAIVNGM-ELDNIL-GTSLLNFYCKVGLIEYAEMVFDRMFEK 338
Query: 307 NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLF 366
+ T++ +I G+ G AI + M ++K + VT ++ A + G+ +
Sbjct: 339 DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEV- 397
Query: 367 SNMEGCYGVVPSADHYACMA----DLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASH 422
CY + S + +A D+ + G + A ++ ++ VE + +W LL A
Sbjct: 398 ----QCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS-TVEKDLILWNTLLAAYA 452
Query: 423 VHG-NPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPG 481
G + + + E P N+ + L+ + G+ D+ + M+ + N
Sbjct: 453 ESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNL- 511
Query: 482 YSWVESRNGVIH 493
SW NG++
Sbjct: 512 ISWTTMMNGMVQ 523
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 131/299 (43%), Gaps = 38/299 (12%)
Query: 70 QVPSPNPFLYSALIRAYTLRGPFTEALRLYTSM--RNQRITPISFTFSALFSAVT---NL 124
Q SP+ Y + + G EAL L T M RN RI P + + +L
Sbjct: 29 QAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGP--EIYGEILQGCVYERDL 86
Query: 125 TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAY 184
+ G Q+HA L G D + N I+ T+L+ Y
Sbjct: 87 STGKQIHARILKNG---DFYARNEYIE--------------------------TKLVIFY 117
Query: 185 ARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLA 244
A+ + A LF +L V++ +W A++ + + + AL F + E + D +
Sbjct: 118 AKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVP 177
Query: 245 GAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK 304
AC L S+ V SG V V S+L DMY KCG +++A VF +
Sbjct: 178 NVCKACGALKWSRFGRGVHGYVVKSGLEDC--VFVASSLADMYGKCGVLDDASKVFDEIP 235
Query: 305 ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQ 363
+RNA +++++VG+ +G+ AI+LF +M + ++P VT L A + G V++G+
Sbjct: 236 DRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGK 294
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/455 (32%), Positives = 255/455 (56%), Gaps = 11/455 (2%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT---N 123
+F ++P + +A+I + EA + + + I P FTF + + T +
Sbjct: 49 VFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRD 108
Query: 124 LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
+ LG QLH +AL +G AS++FV + ++ YVK L AR+ FD+ +VVS T LI+
Sbjct: 109 VKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISG 168
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALE-FFRCLREAGMETDEVT 242
Y + + A LF + + V W A++ G++Q +EA+ F LRE + +E T
Sbjct: 169 YLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNEST 228
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
AI+A + + + + A G NV V ++L+ YSKCGN+E++ F
Sbjct: 229 FPCAITAISNIASHGAGKSIHACA-IKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNK 287
Query: 303 MKE--RNAFTYSSMIVGFAIHGRARAAIKLFYEML-ETEIKPNHVTFVGVLVACTHAGLV 359
++E RN +++SMI G+A +GR A+ +F +M+ +T ++PN+VT +GVL AC HAGL+
Sbjct: 288 LEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLI 347
Query: 360 DQGQYLFSNMEGCYG--VVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGAL 417
+G F+ Y + +HYACM D+L R+G ++A +L+++MP++P W AL
Sbjct: 348 QEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKAL 407
Query: 418 LGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLK 477
LG +H N +A++ + + EL+P ++ +Y++LSN Y++ W +VS +R+ M++ LK
Sbjct: 408 LGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLK 467
Query: 478 KNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKAL 512
+ G SW+E R+ I F+ D + +E+ + L
Sbjct: 468 RFTGCSWIEVRDQ-IRVFVNADKNNELKDEVYRML 501
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 145/333 (43%), Gaps = 45/333 (13%)
Query: 153 YVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDE---LDVKDKVAWT 209
++ S + +A KVFDE+P+ DV+S T +I + + A + F L ++
Sbjct: 37 HIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTF 96
Query: 210 AMVTGYAQNAMPKEALEFFRCLR-EAGMETDEVTLAGAISACAQLGASKDADWVRCIAES 268
V G + + + + C + G+ ++ + ++ +L DA RC ++
Sbjct: 97 GTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDAR--RCFDDT 154
Query: 269 SGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAI 328
NV+ + L+ Y K EEA ++FR M ER+ T++++I GF+ GR A+
Sbjct: 155 RD----PNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAV 210
Query: 329 KLFYEML-ETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMAD 387
F +ML E + PN TF + A ++ G+ + +AC
Sbjct: 211 NTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSI----------------HACAIK 254
Query: 388 LLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGN 447
LG+ N VW +L+ GN + + +++ + E E NI +
Sbjct: 255 FLGK----------------RFNVFVWNSLISFYSKCGNMEDS-LLAFNKLEEEQRNIVS 297
Query: 448 YLLLSNTYASAGRWDD-VSRVRKLMRDKNLKKN 479
+ + YA GR ++ V+ K+++D NL+ N
Sbjct: 298 WNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPN 330
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 150/439 (34%), Positives = 240/439 (54%), Gaps = 14/439 (3%)
Query: 15 ILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSP 74
L TC+ + KQ+H I +HNL L+R L + Y L+F+Q+ SP
Sbjct: 26 FLRTCSNFSQLKQIHTKIIKHNLTNDQL----LVRQLISVSSSFGETQYASLVFNQLQSP 81
Query: 75 NPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPIS-FTFSALFSAV---TNLTLGTQL 130
+ F ++ +IR+ ++ EAL L+ M + FTF + A +++ LGTQ+
Sbjct: 82 STFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQV 141
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDM 190
H A+ GF +D+F NT++ +Y K G DS RKVFD+MP R +VSWT ++ N +
Sbjct: 142 HGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQL 201
Query: 191 NSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISAC 250
+SA +F+++ +++ V+WTAM+T Y +N P EA + FR ++ ++ +E T+ + A
Sbjct: 202 DSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAS 261
Query: 251 AQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFT 310
QLG+ WV A +GF + +G+AL+DMYSKCG++++A VF M+ ++ T
Sbjct: 262 TQLGSLSMGRWVHDYAHKNGF--VLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLAT 319
Query: 311 YSSMIVGFAIHGRARAAIKLF-YEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNM 369
++SMI +HG A+ LF E ++P+ +TFVGVL AC + G V G F+ M
Sbjct: 320 WNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRM 379
Query: 370 EGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDV 429
YG+ P +H ACM LL +A +EKA LVE+M +P+ + + G + G +
Sbjct: 380 IQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD---FNSSFGNEYTDGMNET 436
Query: 430 AEIVSRHLFELEPNNIGNY 448
E S+H + G +
Sbjct: 437 NETPSQHQIMFTKWDTGRF 455
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/480 (30%), Positives = 253/480 (52%), Gaps = 68/480 (14%)
Query: 12 VVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
+ ++L+ CT+L R +++H I+R + + YP
Sbjct: 50 LATLLSNCTSLARVRRIHGDIFRSRI----------------------LDQYPI------ 81
Query: 72 PSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTNLTLGT 128
FL++ ++R+Y +A+++Y M + P ++ + A + + TLG
Sbjct: 82 ----AFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGK 137
Query: 129 QLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNG 188
+LH+ A+ LGF D F + I +Y K+G
Sbjct: 138 ELHSVAVRLGFVGDEFCESGFITLYCKAG------------------------------- 166
Query: 189 DMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAIS 248
+ +AR++FDE + +W A++ G EA+E F ++ +G+E D+ T+ +
Sbjct: 167 EFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTA 226
Query: 249 ACAQLGASKDADWV-RCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERN 307
+C LG A + +C+ ++ ++++ ++L+DMY KCG ++ A ++F M++RN
Sbjct: 227 SCGGLGDLSLAFQLHKCVLQAKT-EEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRN 285
Query: 308 AFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFS 367
++SSMIVG+A +G A++ F +M E ++PN +TFVGVL AC H GLV++G+ F+
Sbjct: 286 VVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFA 345
Query: 368 NMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNP 427
M+ + + P HY C+ DLL R G L++A ++VE MP++PN VWG L+G G+
Sbjct: 346 MMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDV 405
Query: 428 DVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVES 487
++AE V+ ++ ELEP N G Y++L+N YA G W DV RVRKLM+ K + K P YS+ +
Sbjct: 406 EMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSYAST 465
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 156/484 (32%), Positives = 251/484 (51%), Gaps = 42/484 (8%)
Query: 9 EWQVVSILNTCT---TLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPR 65
E+ +++ CT L + K H + + + SS ++T+LL + S R
Sbjct: 242 EYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLL----DMYVKCGDISNAR 297
Query: 66 LLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VT 122
+F++ + +++A+I YT G EAL L+ M+ I P T +++ S +
Sbjct: 298 RVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIE 357
Query: 123 NLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELIT 182
NL LG +H ++ +G D V N ++ MY K RD
Sbjct: 358 NLELGRSVHGLSIKVGIW-DTNVANALVHMYAKC------------YQNRD--------- 395
Query: 183 AYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
A+ +F+ KD VAW ++++G++QN EAL F + + + VT
Sbjct: 396 ----------AKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVT 445
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
+A SACA LG+ + + GF + +V VG+AL+D Y+KCG+ + A +F
Sbjct: 446 VASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDT 505
Query: 303 MKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQG 362
++E+N T+S+MI G+ G +++LF EML+ + KPN TF +L AC H G+V++G
Sbjct: 506 IEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEG 565
Query: 363 QYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASH 422
+ FS+M Y PS HY CM D+L RAG LE+AL ++E MP++P+ +GA L
Sbjct: 566 KKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCG 625
Query: 423 VHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGY 482
+H D+ EIV + + +L P++ Y+L+SN YAS GRW+ VR LM+ + L K G+
Sbjct: 626 MHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGH 685
Query: 483 SWVE 486
S +E
Sbjct: 686 STME 689
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 162/351 (46%), Gaps = 46/351 (13%)
Query: 15 ILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSP 74
+L+ CT + +Q H + + L I T L+ + + RL+F Q+P P
Sbjct: 50 LLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLV----SLYGFFGYTKDARLVFDQIPEP 105
Query: 75 NPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHAHA 134
+ +L+ ++R Y L E ++LY +
Sbjct: 106 DFYLWKVMLRCYCLNKESVEVVKLYDLLMKH----------------------------- 136
Query: 135 LLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEM---PQRDVVSWTELITAYARNGDMN 191
GF D V + +K + LD+ +K+ ++ P D V T L+ YA+ G++
Sbjct: 137 ---GFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIK 193
Query: 192 SARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACA 251
SA ++F+++ +++ V WT+M+ GY +N + +E L F +RE + +E T I AC
Sbjct: 194 SAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACT 253
Query: 252 QLGASKDADWVR-CIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFT 310
+L A W C+ +S G + + ++L+DMY KCG++ A VF +
Sbjct: 254 KLSALHQGKWFHGCLVKS---GIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVM 310
Query: 311 YSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
+++MIVG+ +G A+ LF +M EIKPN VT VL C GL++
Sbjct: 311 WTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC---GLIEN 358
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 131/283 (46%), Gaps = 23/283 (8%)
Query: 173 DVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLR 232
D+ T+L++ Y G AR +FD++ D W M+ Y N E ++ + L
Sbjct: 75 DISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLM 134
Query: 233 EAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGN 292
+ G D++ + A+ AC +L + + C P+ + +V + L+DMY+KCG
Sbjct: 135 KHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKV---PSFDNVVLTGLLDMYAKCGE 191
Query: 293 VEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVA 352
++ A+ VF + RN ++SMI G+ + + LF M E + N T+ +++A
Sbjct: 192 IKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMA 251
Query: 353 CTHAGLVDQGQYLFSNMEGCY---GVVPSADHYACMADLLGRAGHLEKALQLVETMPVEP 409
CT + QG++ GC G+ S+ + D+ + G + A ++
Sbjct: 252 CTKLSALHQGKWF----HGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHS-HV 306
Query: 410 NGAVWGALL-GASHVHGNPDVAEIVSRHLF------ELEPNNI 445
+ +W A++ G +H N V E +S LF E++PN +
Sbjct: 307 DLVMWTAMIVGYTH---NGSVNEALS--LFQKMKGVEIKPNCV 344
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 161/534 (30%), Positives = 269/534 (50%), Gaps = 46/534 (8%)
Query: 9 EWQVVSILNTCTTLR---RAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPR 65
E+ + S+L +C ++ +H + + + S Y+ ++ T +
Sbjct: 111 EFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAAC--- 167
Query: 66 LLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSM--RNQRITPISFTFSALFSA-VT 122
L+F + N ++ LI +T G L++Y M N +TP T + SA +
Sbjct: 168 LIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASID 227
Query: 123 NLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELIT 182
++T G Q+HA + GF S++ V N+++ +Y + G L
Sbjct: 228 SVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYL----------------------- 264
Query: 183 AYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
+ A+ F E++ KD + W +++ + + EAL F+ G + T
Sbjct: 265 --------SEAKHYFHEMEDKDLITWNTLISEL-ERSDSSEALLMFQRFESQGFVPNCYT 315
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
++ACA + A + GF +NV + +AL+DMY+KCGN+ ++ VF
Sbjct: 316 FTSLVAACANIAALNCGQQLHGRIFRRGFN--KNVELANALIDMYAKCGNIPDSQRVFGE 373
Query: 303 MKER-NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
+ +R N +++SM++G+ HG A++LF +M+ + I+P+ + F+ VL AC HAGLV++
Sbjct: 374 IVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEK 433
Query: 362 GQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGAS 421
G F+ ME YG+ P D Y C+ DLLGRAG + +A +LVE MP +P+ + WGA+LGA
Sbjct: 434 GLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGAC 493
Query: 422 HVHG-NPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNP 480
H N ++ + +R + EL+P +G Y++LS YA+ G+W D +RVRK+MR KK
Sbjct: 494 KAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEA 553
Query: 481 GYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYD 534
G SW+ N V F D P + + L L+E + GY+P L S+ D
Sbjct: 554 GMSWILVENQVF-SFAVSDKMCPNASSVYSVLGLLIEETREAGYVPELDSLVND 606
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 121/254 (47%), Gaps = 13/254 (5%)
Query: 170 PQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFR 229
P++ + T LI +Y G + AR LFDE+ +D VAWTAM+TGYA + A E F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 230 CLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSK 289
+ + G +E TL+ + +C + V + G ++ V +A+++MY+
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVK--LGMEGSLYVDNAMMNMYAT 158
Query: 290 CG-NVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEML--ETEIKPNHVTF 346
C +E A +FR +K +N T++++I GF G +K++ +ML E+ P +T
Sbjct: 159 CSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI 218
Query: 347 VGVLVACTHAGLVDQGQYLFSNM--EGCYGVVPSADHYACMADLLGRAGHLEKALQLVET 404
+ A V G+ + +++ G +P + + DL R G+L +A
Sbjct: 219 --AVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNS---ILDLYCRCGYLSEAKHYFHE 273
Query: 405 MPVEPNGAVWGALL 418
M + + W L+
Sbjct: 274 ME-DKDLITWNTLI 286
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%)
Query: 267 ESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARA 326
E + P ++ ++ + L+ Y + G VEEA ++F M +R+ +++MI G+A
Sbjct: 35 EYPPYKPKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNAR 94
Query: 327 AIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQG 362
A + F+EM++ PN T VL +C + ++ G
Sbjct: 95 AWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYG 130
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 161/463 (34%), Positives = 250/463 (53%), Gaps = 47/463 (10%)
Query: 79 YSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL---TLGTQLHAHAL 135
++ +I A+ G E L L M+ Q T +AL SA +NL +G Q HA +
Sbjct: 387 WNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLI 446
Query: 136 LLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARE 195
G + +N+ +I MY KSG + ++K+F+ + YA
Sbjct: 447 RQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEG-------------SGYAE--------- 483
Query: 196 LFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGA 255
+D+ W +M++GY QN ++ FR + E + + VT+A + AC+Q+G+
Sbjct: 484 -------RDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGS 536
Query: 256 SKDADWVRCIAESSGFGPAR----NVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTY 311
V + GF + NV V SALVDMYSK G ++ A ++F KERN+ TY
Sbjct: 537 ------VDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTY 590
Query: 312 SSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEG 371
++MI+G+ HG AI LF M E+ IKP+ +TFV VL AC+++GL+D+G +F M
Sbjct: 591 TTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMRE 650
Query: 372 CYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGA-VWGALLGASHVHGNPDVA 430
Y + PS++HY C+ D+LGR G + +A + V+ + E N A +WG+LLG+ +HG ++A
Sbjct: 651 VYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELA 710
Query: 431 EIVSRHL--FELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESR 488
E VS L F+ N G +LLSN YA +W V +VR+ MR+K LKK G S +E
Sbjct: 711 ETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIA 770
Query: 489 NGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSV 531
G ++ F++ D +HP +EI +D L + ++ +L L +V
Sbjct: 771 -GYVNCFVSRDQEHPHSSEIYDVIDGLAKDMRGDSFLTTLPTV 812
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 194/461 (42%), Gaps = 79/461 (17%)
Query: 14 SILNTCT---TLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPI---HSYPRLL 67
S L C L+ K +H H+ R L SS ++ N L ++ + + P + R +
Sbjct: 112 STLKACAETKNLKAGKAVHCHLIRC-LQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKV 170
Query: 68 FSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT---NL 124
F + N ++ LI Y G EA R + M + P +F +F AV+ ++
Sbjct: 171 FDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSI 230
Query: 125 TLGTQLHAHALLLG--FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELIT 182
+ L LG + D+FV ++ I MY
Sbjct: 231 KKANVFYGLMLKLGDEYVKDLFVVSSAISMY----------------------------- 261
Query: 183 AYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFF-RCLREAGMETDEV 241
A GD+ S+R +FD ++ W M+ Y QN E++E F + + +DEV
Sbjct: 262 --AELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEV 319
Query: 242 TL---AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYN 298
T A A+SA Q+ + S F V+V S +V MYS+CG+V +++
Sbjct: 320 TYLLAASAVSALQQVELGRQFHGFV----SKNFRELPIVIVNSLMV-MYSRCGSVHKSFG 374
Query: 299 VFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVAC----- 353
VF M+ER+ ++++MI F +G + L YEM + K +++T +L A
Sbjct: 375 VFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRN 434
Query: 354 ------THAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVE-TMP 406
THA L+ QG F M + + D+ ++G + + +L E +
Sbjct: 435 KEIGKQTHAFLIRQG-IQFEGMN------------SYLIDMYSKSGLIRISQKLFEGSGY 481
Query: 407 VEPNGAVWGALLGASHVHGNPDVAEIVSRHLFE--LEPNNI 445
E + A W +++ +G+ + +V R + E + PN +
Sbjct: 482 AERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAV 522
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 135/327 (41%), Gaps = 49/327 (14%)
Query: 12 VVSILNTCTTLRR---AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLF 68
V ++L+ + LR KQ HA + R + + +L + + + LF
Sbjct: 422 VTALLSAASNLRNKEIGKQTHAFLIRQGIQ-----FEGMNSYLIDMYSKSGLIRISQKLF 476
Query: 69 --SQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALF---SAVTN 123
S + ++++I YT G + ++ M Q I P + T +++ S + +
Sbjct: 477 EGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGS 536
Query: 124 LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
+ LG QLH ++ ++FV + ++ MY K+G + A +F + +R+ V++T
Sbjct: 537 VDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYT----- 591
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
M+ GY Q+ M + A+ F ++E+G++ D +T
Sbjct: 592 --------------------------TMILGYGQHGMGERAISLFLSMQESGIKPDAITF 625
Query: 244 AGAISACAQLGASKDADWV-RCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
+SAC+ G + + + E P+ + DM + G V EAY +G
Sbjct: 626 VAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYC--CITDMLGRVGRVNEAYEFVKG 683
Query: 303 MKERN--AFTYSSMIVGFAIHGRARAA 327
+ E A + S++ +HG A
Sbjct: 684 LGEEGNIAELWGSLLGSCKLHGELELA 710
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 159/380 (41%), Gaps = 53/380 (13%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPIS----FTFSALFSA 120
R LF +P P L++ +I + EAL Y+ M+ + P + +T+S+ A
Sbjct: 59 RQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMK--KTAPFTNCDAYTYSSTLKA 116
Query: 121 ---VTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCL--------DSARKVFDEM 169
NL G +H H + S V+N+++ MYV CL D RKVFD M
Sbjct: 117 CAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYV--SCLNAPDCFEYDVVRKVFDNM 174
Query: 170 PQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFR 229
+++VV+W LI+ Y + G +NA EA F
Sbjct: 175 RRKNVVAWNTLISWYVKTG----------------------------RNA---EACRQFG 203
Query: 230 CLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSK 289
+ ++ V+ A + + K A+ + G +++ V S+ + MY++
Sbjct: 204 IMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAE 263
Query: 290 CGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLET-EIKPNHVTFVG 348
G++E + VF ERN +++MI + + +I+LF E + + EI + VT++
Sbjct: 264 LGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLL 323
Query: 349 VLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVE 408
A + V+ G+ + + +P + M + R G + K+ + +M E
Sbjct: 324 AASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMV-MYSRCGSVHKSFGVFLSMR-E 381
Query: 409 PNGAVWGALLGASHVHGNPD 428
+ W ++ A +G D
Sbjct: 382 RDVVSWNTMISAFVQNGLDD 401
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 117/259 (45%), Gaps = 34/259 (13%)
Query: 181 ITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET-- 238
++ ++G+ AR+LFD + V W ++ G+ N +P EAL F+ +++ T
Sbjct: 46 LSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNC 105
Query: 239 DEVTLAGAISACAQL-----GASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNV 293
D T + + ACA+ G + +RC+ SS +V ++L++MY C N
Sbjct: 106 DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSR-------VVHNSLMNMYVSCLNA 158
Query: 294 EEAY------NVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFV 347
+ + VF M+ +N ++++I + GR A + F M+ E+KP+ V+FV
Sbjct: 159 PDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFV 218
Query: 348 GVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHY-------ACMADLLGRAGHLEKALQ 400
V A + + + + + M + D Y + + G +E + +
Sbjct: 219 NVFPAVSISRSIKKANVFYGLM------LKLGDEYVKDLFVVSSAISMYAELGDIESSRR 272
Query: 401 LVETMPVEPNGAVWGALLG 419
+ ++ VE N VW ++G
Sbjct: 273 VFDSC-VERNIEVWNTMIG 290
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/426 (35%), Positives = 239/426 (56%), Gaps = 9/426 (2%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV---TN 123
LF Q+ + + +I + EAL YT M + P L SA
Sbjct: 261 LFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVG 320
Query: 124 LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
+ G QLH + GF F+ T+I Y S + A + F+ + + S LI
Sbjct: 321 SSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAG 380
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFR-CLREAGMETDEVT 242
+ +NG + ARE+FD+ KD +W AM++GYAQ+ P+ AL FR + + ++ D +T
Sbjct: 381 FVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAIT 440
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
+ SA + LG+ ++ S P N+ +A++DMY+KCG++E A N+F
Sbjct: 441 MVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLT--AAIIDMYAKCGSIETALNIFHQ 498
Query: 303 MKERNAFT---YSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLV 359
K ++ T ++++I G A HG A+ A+ L+ ++ IKPN +TFVGVL AC HAGLV
Sbjct: 499 TKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLV 558
Query: 360 DQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLG 419
+ G+ F +M+ +G+ P HY CM DLLG+AG LE+A ++++ MPV+ + +WG LL
Sbjct: 559 ELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLS 618
Query: 420 ASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKN 479
AS HGN ++AE+ + L ++P++ G ++LSN YA AGRW+DV+ VR+ MR ++++ +
Sbjct: 619 ASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWS 678
Query: 480 PGYSWV 485
+S V
Sbjct: 679 RAFSGV 684
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 131/515 (25%), Positives = 234/515 (45%), Gaps = 78/515 (15%)
Query: 3 GERRALEWQVVSILNTCTT---LRRAKQLHAHIYRHNLHQSSYIITNLLR---------- 49
GE E +VS L +C + + +Q+H + + L + YI ++L
Sbjct: 35 GESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLAD 94
Query: 50 ---------HLTTTFPHLPIHSYPR--------LLFSQVPSPNPFLYSALIRAYTLRGPF 92
L + ++ + Y R LF +P + Y+ LI+ Y +
Sbjct: 95 AESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQW 154
Query: 93 TEALRLYTSMRNQRITPISFTFSALFSAVTNLT---LGTQLHAHALLLGFASDIFVNNTM 149
+EA+ L+ MRN I T + + SA ++L L + A+ L +FV+ +
Sbjct: 155 SEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNL 214
Query: 150 IKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWT 209
+ MY CL ARK+FDEMP+R++V+W ++ Y++ G + A ELFD++ KD V+W
Sbjct: 215 LHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWG 274
Query: 210 AMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQ-LGASK----------- 257
M+ G + EAL ++ + GM+ EV + +SA A+ +G+SK
Sbjct: 275 TMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKR 334
Query: 258 --------DADWVRCIAESSGFGPARNVLVGS---------ALVDMYSKCGNVEEAYNVF 300
A + A S+ A S AL+ + K G VE+A VF
Sbjct: 335 GFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVF 394
Query: 301 RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEML-ETEIKPNHVTFVGVLVACTHAGLV 359
+++ F++++MI G+A + A+ LF EM+ +++KP+ +T V V A + G +
Sbjct: 395 DQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSL 454
Query: 360 DQGQYLFSNMEGCYGVVPSADHY-ACMADLLGRAGHLEKALQL------VETMPVEPNGA 412
++G+ + + +P D+ A + D+ + G +E AL + + + + P
Sbjct: 455 EEGKRAHDYLN--FSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISP--- 509
Query: 413 VWGALLGASHVHGNPDVAEIVSRHL--FELEPNNI 445
W A++ S HG+ +A + L ++PN+I
Sbjct: 510 -WNAIICGSATHGHAKLALDLYSDLQSLPIKPNSI 543
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 139/458 (30%), Positives = 245/458 (53%), Gaps = 36/458 (7%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN- 123
R +F Q+ P+ ++ +I G EA+ +++ MR+ P + + +L A T
Sbjct: 325 RRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKP 384
Query: 124 --LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
L+ G Q+H++ + GF +D+ V N+++ MY L +F++
Sbjct: 385 MALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDF------------ 432
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
RN D V+W ++T Q+ P E L F+ + + E D +
Sbjct: 433 ----RNN--------------ADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHI 474
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
T+ + C ++ + K V C + +G P + + + L+DMY+KCG++ +A +F
Sbjct: 475 TMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQ--FIKNGLIDMYAKCGSLGQARRIFD 532
Query: 302 GMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
M R+ ++S++IVG+A G A+ LF EM I+PNHVTFVGVL AC+H GLV++
Sbjct: 533 SMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEE 592
Query: 362 GQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGAS 421
G L++ M+ +G+ P+ +H +C+ DLL RAG L +A + ++ M +EP+ VW LL A
Sbjct: 593 GLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSAC 652
Query: 422 HVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPG 481
GN +A+ + ++ +++P N ++LL + +AS+G W++ + +R M+ ++KK PG
Sbjct: 653 KTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPG 712
Query: 482 YSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERL 519
SW+E + IH F A D+ HPE ++I L ++ ++
Sbjct: 713 QSWIEIEDK-IHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 194/450 (43%), Gaps = 53/450 (11%)
Query: 13 VSILNTCTTLR---RAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFS 69
+S++ C++ R + +++H HI N + I+ N H+ + + R +F
Sbjct: 71 ISLICACSSSRSLAQGRKIHDHILNSNCKYDT-ILNN---HILSMYGKCGSLRDAREVFD 126
Query: 70 QVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV---TNLTL 126
+P N Y+++I Y+ G EA+RLY M + + P F F ++ A +++ L
Sbjct: 127 FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGL 186
Query: 127 GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYAR 186
G QLHA + L +S + N +I MYV R
Sbjct: 187 GKQLHAQVIKLESSSHLIAQNALIAMYV-------------------------------R 215
Query: 187 NGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGM-ETDEVTLAG 245
M+ A +F + +KD ++W++++ G++Q EAL + + G+ +E
Sbjct: 216 FNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGS 275
Query: 246 AISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE 305
++ AC+ L + + S A N + G +L DMY++CG + A VF ++
Sbjct: 276 SLKACSSLLRPDYGSQIHGLCIKSEL--AGNAIAGCSLCDMYARCGFLNSARRVFDQIER 333
Query: 306 RNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYL 365
+ +++ +I G A +G A A+ +F +M + P+ ++ +L A T + QG +
Sbjct: 334 PDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQI 393
Query: 366 FSNMEGCYGVVPSADHYAC--MADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHV 423
S + +G + AD C + + L L E + W +L A
Sbjct: 394 HSYIIK-WGFL--ADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQ 450
Query: 424 HGNP-DVAEIVSRHLF-ELEPNNI--GNYL 449
H P ++ + L E EP++I GN L
Sbjct: 451 HEQPVEMLRLFKLMLVSECEPDHITMGNLL 480
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 194/447 (43%), Gaps = 59/447 (13%)
Query: 14 SILNTCTT---LRRAKQLHAHIYRHNLHQSSYIIT-NLLRHLTTTFPHLPIHSYPRLLFS 69
SI+ C + + KQLHA + + L SS++I N L + F + S +F
Sbjct: 173 SIIKACASSSDVGLGKQLHAQVIK--LESSSHLIAQNALIAMYVRFNQM---SDASRVFY 227
Query: 70 QVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRI-TPISFTFSALFSAVTNL---T 125
+P + +S++I ++ G EAL M + + P + F + A ++L
Sbjct: 228 GIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPD 287
Query: 126 LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYA 185
G+Q+H L S++ N +GC L YA
Sbjct: 288 YGSQIHG----LCIKSELAGNAI-------AGC--------------------SLCDMYA 316
Query: 186 RNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
R G +NSAR +FD+++ D +W ++ G A N EA+ F +R +G D ++L
Sbjct: 317 RCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRS 376
Query: 246 AISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE 305
+ CAQ + ++ + +G ++ V ++L+ MY+ C ++ +N+F +
Sbjct: 377 LL--CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRN 434
Query: 306 R-NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQY 364
++ ++++++ H + ++LF ML +E +P+H+T +L C + G
Sbjct: 435 NADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQ 494
Query: 365 LFSNMEGCY----GVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGA 420
+ CY G+ P + D+ + G L +A ++ ++M + W L+
Sbjct: 495 VH-----CYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD-NRDVVSWSTLIVG 548
Query: 421 SHVHGNPDVAEIVSRHLFE--LEPNNI 445
G + A I+ + + +EPN++
Sbjct: 549 YAQSGFGEEALILFKEMKSAGIEPNHV 575
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/413 (34%), Positives = 232/413 (56%), Gaps = 18/413 (4%)
Query: 83 IRAYTLRGPFTEALRLYTSMRNQRITPI-SFTFSALF---SAVTNLTLGTQLHAHALLLG 138
+ +Y +G +AL L+ M + P+ + FS +A LG +HAH++
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 139 FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFD 198
F S+ FV ++ MY K + ARK+FDE+PQR+ V W +I+ Y G + A EL++
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 199 ELDV-KDKVAWTAMVTGY-AQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGAS 256
+DV ++ ++ A++ G A+EF+R + E + + +TL +SAC+ +GA
Sbjct: 139 AMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGA- 197
Query: 257 KDADWVRCIAESSGFGPARNVL-----VGSALVDMYSKCGNVEEAYNVFRGMKERNAFTY 311
R I E + RN++ + S LV+ Y +CG++ VF M++R+ +
Sbjct: 198 -----FRLIKEIHSYA-FRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAW 251
Query: 312 SSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEG 371
SS+I +A+HG A +A+K F EM ++ P+ + F+ VL AC+HAGL D+ F M+G
Sbjct: 252 SSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQG 311
Query: 372 CYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAE 431
YG+ S DHY+C+ D+L R G E+A ++++ MP +P WGALLGA +G ++AE
Sbjct: 312 DYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAE 371
Query: 432 IVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSW 484
I +R L +EP N NY+LL Y S GR ++ R+R M++ +K +PG SW
Sbjct: 372 IAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 157/384 (40%), Gaps = 87/384 (22%)
Query: 8 LEWQVVSI-LNTCTTLRR---AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSY 63
L+ V S+ L +C R +HAH + N + ++ LL S+
Sbjct: 46 LDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSV----SH 101
Query: 64 PRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMR---NQ--------------- 105
R LF ++P N +++A+I YT G EA+ LY +M N+
Sbjct: 102 ARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTED 161
Query: 106 ---------------RITPISFTFSALFSAVTNL---TLGTQLHAHALLLGFASDIFVNN 147
R P T AL SA + + L ++H++A + +
Sbjct: 162 GSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKS 221
Query: 148 TMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVK---- 203
+++ Y + G + + VFD M RDVV+W+ LI+AYA +GD SA + F E+++
Sbjct: 222 GLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTP 281
Query: 204 DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVR 263
D +A+ ++ + + EAL +F+ M+ D L ASKD
Sbjct: 282 DDIAFLNVLKACSHAGLADEALVYFK-----RMQGD-----------YGLRASKDHY--- 322
Query: 264 CIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER-NAFTYSSMIVGFAIHG 322
S LVD+ S+ G EEAY V + M E+ A T+ +++ +G
Sbjct: 323 -----------------SCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYG 365
Query: 323 RARAAIKLFYE--MLETEIKPNHV 344
A E M+E E N+V
Sbjct: 366 EIELAEIAARELLMVEPENPANYV 389
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/434 (34%), Positives = 233/434 (53%), Gaps = 21/434 (4%)
Query: 78 LYSA--LIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN---LTLGTQLHA 132
LY A + +AY + +AL Y + P S+TF +L S + + G H
Sbjct: 83 LYCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHG 142
Query: 133 HALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNS 192
A+ G + V N+++ MY G LD A+K+F E+P+RD+VSW +I RNGD+ +
Sbjct: 143 QAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLA 202
Query: 193 ARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACA- 251
A +LFDE+ K+ ++W M++ Y P ++ FR + AG + +E TL ++AC
Sbjct: 203 AHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGR 262
Query: 252 ----QLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERN 307
+ G S A +R SS V++ +AL+DMY KC V A +F + RN
Sbjct: 263 SARLKEGRSVHASLIRTFLNSS-------VVIDTALIDMYGKCKEVGLARRIFDSLSIRN 315
Query: 308 AFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFS 367
T++ MI+ +HGR ++LF M+ ++P+ VTFVGVL C AGLV QGQ +S
Sbjct: 316 KVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYS 375
Query: 368 NMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMP---VEPNGAVWGALLGASHVH 424
M + + P+ H CMA+L AG E+A + ++ +P V P W LL +S
Sbjct: 376 LMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFT 435
Query: 425 GNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSW 484
GNP + E +++ L E +P N Y LL N Y+ GRW+DV+RVR++++++ + + PG
Sbjct: 436 GNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGL 495
Query: 485 VESRNGVIHEFLAG 498
V+ + ++H G
Sbjct: 496 VDLKE-IVHGLRLG 508
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 163/506 (32%), Positives = 260/506 (51%), Gaps = 48/506 (9%)
Query: 24 RAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALI 83
R + LHAH+ + + +T + L T + R +F ++P + +I
Sbjct: 34 RGRVLHAHLVTSGIAR----LTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMI 89
Query: 84 RAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL---TLGTQLHAHALLLGFA 140
A G + E+L + M + +F +L A NL G +H L +
Sbjct: 90 GACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYE 149
Query: 141 SDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDEL 200
SD F+ +++I MY K G + +ARKVF ++ ++D+V + +I+ YA N + A L ++
Sbjct: 150 SDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDM 209
Query: 201 DV---------------------------------------KDKVAWTAMVTGYAQNAMP 221
+ D V+WT++++G N
Sbjct: 210 KLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQN 269
Query: 222 KEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGS 281
++A + F+ + G+ + T+ + AC L K + + +G + V S
Sbjct: 270 EKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGL--EDHGFVRS 327
Query: 282 ALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKP 341
AL+DMY KCG + EA +FR ++ T++SMI +A HG A A++LF +M T K
Sbjct: 328 ALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKL 387
Query: 342 NHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQL 401
+H+TF +L AC+HAGL D GQ LF M+ Y +VP +HYACM DLLGRAG L +A ++
Sbjct: 388 DHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEM 447
Query: 402 VETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRW 461
++ M +EP+ VWGALL A HGN ++A I ++HL ELEP N GN LLL++ YA+AG W
Sbjct: 448 IKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSW 507
Query: 462 DDVSRVRKLMRDKNLKKNPGYSWVES 487
+ V R++K+++ K ++ G SWVE+
Sbjct: 508 ESVVRMKKMIKKKRFRRFLGSSWVET 533
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 118/263 (44%), Gaps = 42/263 (15%)
Query: 102 MRNQRITPISFTFSALFSAVTNLTL---------GTQLHAHALLLGFASDIFVNNTMIKM 152
M+ I P SF ++ S V + G LHAH + G A + ++
Sbjct: 1 MKKLTIVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTF 60
Query: 153 YVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMV 212
YV+ G + ARKVFDEMP+RD+ +I A ARN
Sbjct: 61 YVECGKVLDARKVFDEMPKRDISGCVVMIGACARN------------------------- 95
Query: 213 TGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFG 272
GY Q E+L+FFR + + G++ D + + A L + + C+ F
Sbjct: 96 -GYYQ-----ESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLK--FS 147
Query: 273 PARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFY 332
+ + S+L+DMYSK G V A VF + E++ +++MI G+A + +A A+ L
Sbjct: 148 YESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVK 207
Query: 333 EMLETEIKPNHVTFVGVLVACTH 355
+M IKP+ +T+ ++ +H
Sbjct: 208 DMKLLGIKPDVITWNALISGFSH 230
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 261 bits (666), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 162/511 (31%), Positives = 254/511 (49%), Gaps = 47/511 (9%)
Query: 11 QVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
Q + L C++++ Q+H I+ +L S+II+ L+R ++ ++ R L
Sbjct: 15 QCLIFLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVR--VSSLSLAKDLAFARTLLLH 72
Query: 71 VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN---LTLG 127
P ++ L R Y+ E++ +Y+ M+ + I P TF L A + LT G
Sbjct: 73 SSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAG 132
Query: 128 TQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARN 187
Q+ L GF D++V N +I +Y + +K D
Sbjct: 133 RQIQVEVLKHGFDFDVYVGNNLIHLY------GTCKKTSD-------------------- 166
Query: 188 GDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAI 247
AR++FDE+ ++ V+W +++T +N E F + DE T+ +
Sbjct: 167 -----ARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLL 221
Query: 248 SACA-QLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER 306
SAC L K + E N +G+ALVDMY+K G +E A VF M ++
Sbjct: 222 SACGGNLSLGKLVHSQVMVRELE-----LNCRLGTALVDMYAKSGGLEYARLVFERMVDK 276
Query: 307 NAFTYSSMIVGFAIHGRARAAIKLFYEML-ETEIKPNHVTFVGVLVACTHAGLVDQGQYL 365
N +T+S+MIVG A +G A A++LF +M+ E+ ++PN+VTF+GVL AC+H GLVD G
Sbjct: 277 NVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKY 336
Query: 366 FSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHG 425
F ME + + P HY M D+LGRAG L +A ++ MP EP+ VW LL A +H
Sbjct: 337 FHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHH 396
Query: 426 NPD---VAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGY 482
+ D + E V + L ELEP GN ++++N +A A W + + VR++M++ +KK G
Sbjct: 397 DEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGE 456
Query: 483 SWVESRNGVIHEFLAGDVKHPEINEIKKALD 513
S +E G H F +G E I + LD
Sbjct: 457 SCLE-LGGSFHRFFSGYDPRSEYVSIYELLD 486
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 161/558 (28%), Positives = 288/558 (51%), Gaps = 56/558 (10%)
Query: 15 ILNTCTTLRR---AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
IL C L R + H + + L ++ +++ LL T +P LF ++
Sbjct: 164 ILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELL----TLYPKAGRMGDAYNLFVEM 219
Query: 72 PSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFS------------ 119
P N ++ +I+ ++ A++++ M+ + P T++++ S
Sbjct: 220 PVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVL 279
Query: 120 -----------AVTN---------------LTLGTQLHAHALLLGFASDIFVNNTMIKMY 153
AV+ L++ ++H + + GF + N +I +Y
Sbjct: 280 KYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVY 339
Query: 154 VKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELD-------VK-DK 205
K G + A +F ++ + + SW LIT++ G ++ A LF EL+ VK +
Sbjct: 340 GKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANV 399
Query: 206 VAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCI 265
V WT+++ G ++LE+FR ++ + + + VT+ +S CA+L A +
Sbjct: 400 VTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGH 459
Query: 266 AESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRAR 325
+ + N+LV +ALV+MY+KCG + E VF +++++ +++S+I G+ +HG A
Sbjct: 460 VIRTSM--SENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAE 517
Query: 326 AAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACM 385
A+ +F M+ + P+ + V VL AC+HAGLV++G+ +F +M +G+ P +HYAC+
Sbjct: 518 KALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACI 577
Query: 386 ADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNI 445
DLLGR G L++A ++V+ MP+EP V GALL + +H N D+AE ++ L LEP
Sbjct: 578 VDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERT 637
Query: 446 GNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEI 505
G+Y+LLSN Y++ GRW++ + VR L + K+LKK G SW+E + ++F +G + E
Sbjct: 638 GSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKK-YKFSSGSIVQSEF 696
Query: 506 NEIKKALDDLLERLKAIG 523
I L+DL+ + G
Sbjct: 697 ETIYPVLEDLVSHMLKKG 714
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 182/374 (48%), Gaps = 27/374 (7%)
Query: 15 ILNTCTTLRRAKQLHAHIYRHN-LHQSSYIITNLLRHLTTTFPHLPIHSYPRLLF---SQ 70
+L C T ++ +Q+HA + + + +S + NL+ + + L + R +F S
Sbjct: 62 LLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLI----SVYARLGLLLDARNVFETVSL 117
Query: 71 VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT---LG 127
V + L++++++A G + AL LY MR + +T + + A L L
Sbjct: 118 VLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLC 177
Query: 128 TQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARN 187
H + +G ++ V N ++ +Y K+G + A +F EMP R+ +SW +I +++
Sbjct: 178 RAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQE 237
Query: 188 GDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
D SA ++F+ + + D+V WT++++ ++Q ++ L++F +R +G L
Sbjct: 238 YDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEAL 297
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFG---PARNVLVGSALVDMYSKCGNVEEAYNVF 300
A S CA+L A A+ V GF P+RN AL+ +Y K G V++A ++F
Sbjct: 298 AVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRN-----ALIHVYGKQGKVKDAEHLF 352
Query: 301 RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLE----TEIKPNHVTFVGVLVACTHA 356
R ++ + +++S+I F G+ A+ LF E+ E +K N VT+ V+ C
Sbjct: 353 RQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQ 412
Query: 357 GLVDQGQYLFSNME 370
G D F M+
Sbjct: 413 GRGDDSLEYFRQMQ 426
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 134/355 (37%), Positives = 201/355 (56%), Gaps = 15/355 (4%)
Query: 179 ELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET 238
+L+ YA +GD+ +A LF L ++D + W AM++GY Q + +E L + +R+ +
Sbjct: 148 KLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVP 207
Query: 239 DEVTLAGAISACA---QLGASKDADWV---RCIAESSGFGPARNVLVGSALVDMYSKCGN 292
D+ T A AC+ +L K A V RCI N++V SALVDMY KC +
Sbjct: 208 DQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKS--------NIIVDSALVDMYFKCSS 259
Query: 293 VEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVA 352
+ + VF + RN T++S+I G+ HG+ +K F +M E +PN VTF+ VL A
Sbjct: 260 FSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTA 319
Query: 353 CTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGA 412
C H GLVD+G F +M+ YG+ P HYA M D LGRAG L++A + V P + +
Sbjct: 320 CNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPP 379
Query: 413 VWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMR 472
VWG+LLGA +HGN + E+ + EL+P N GNY++ +N YAS G + S+VR+ M
Sbjct: 380 VWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKME 439
Query: 473 DKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPN 527
+ +KK+PGYS +E + G +H F+ D H +I K + ++ I Y P+
Sbjct: 440 NAGVKKDPGYSQIELQ-GEVHRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYPD 493
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 128/296 (43%), Gaps = 42/296 (14%)
Query: 66 LLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALF---SAVT 122
+LF + + ++A+I Y +G E L +Y MR RI P +TF+++F SA+
Sbjct: 164 ILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALD 223
Query: 123 NLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELIT 182
L G + HA + S+I V++ ++ MY K +VFD++ R+V++WT LI+
Sbjct: 224 RLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLIS 283
Query: 183 AYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
Y +G ++ E L+ F ++E G + VT
Sbjct: 284 GYGYHGKVS-------------------------------EVLKCFEKMKEEGCRPNPVT 312
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYN-VFR 301
++AC G D W + +G +A+VD + G ++EAY V +
Sbjct: 313 FLVVLTACNH-GGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMK 371
Query: 302 GMKERNAFTYSSMIVGFAIHGRAR----AAIKLFYEMLETEIKPNHVTFVGVLVAC 353
+ + + S++ IHG + AA K F E+ T N+V F +C
Sbjct: 372 SPCKEHPPVWGSLLGACRIHGNVKLLELAATK-FLELDPTN-GGNYVVFANGYASC 425
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 231 LREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKC 290
L +G++ + T A + C Q R A+ G A N + L+ +Y+
Sbjct: 99 LWSSGLQVEPETYAVLLQECKQRKEYTKGK--RIHAQMFVVGFALNEYLKVKLLILYALS 156
Query: 291 GNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVL 350
G+++ A +FR +K R+ +++MI G+ G + + ++Y+M + I P+ TF V
Sbjct: 157 GDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVF 216
Query: 351 VACTHAGLVDQGQ 363
AC+ ++ G+
Sbjct: 217 RACSALDRLEHGK 229
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/512 (28%), Positives = 255/512 (49%), Gaps = 46/512 (8%)
Query: 12 VVSILNTCTTL---RRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLF 68
++++++ CT L R + +H + R ++ +LL + LF
Sbjct: 166 LITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLL----NCYAKSRAFKEAVNLF 221
Query: 69 SQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT---NLT 125
+ + +S +I Y G EAL ++ M + P T + A +L
Sbjct: 222 KMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLE 281
Query: 126 LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYA 185
G + H A+ G +++ V+ ++ MY+K + A VF +P++DV
Sbjct: 282 QGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDV----------- 330
Query: 186 RNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRC-LREAGMETDEVTLA 244
V+W A+++G+ N M ++E F L E D + +
Sbjct: 331 --------------------VSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMV 370
Query: 245 GAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK 304
+ +C++LG + A GF N +G++LV++YS+CG++ A VF G+
Sbjct: 371 KVLGSCSELGFLEQAKCFHSYVIKYGFDS--NPFIGASLVELYSRCGSLGNASKVFNGIA 428
Query: 305 ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLET-EIKPNHVTFVGVLVACTHAGLVDQGQ 363
++ ++S+I G+ IHG+ A++ F M+++ E+KPN VTF+ +L AC+HAGL+ +G
Sbjct: 429 LKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGL 488
Query: 364 YLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHV 423
+F M Y + P+ +HYA + DLLGR G L+ A+++ + MP P + G LLGA +
Sbjct: 489 RIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRI 548
Query: 424 HGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYS 483
H N ++AE V++ LFELE N+ G Y+L+SN Y G W++V ++R ++ + +KK S
Sbjct: 549 HQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAES 608
Query: 484 WVESRNGVIHEFLAGDVKHPEINEIKKALDDL 515
+E R V H F+A D HPE + L +L
Sbjct: 609 LIEIRRKV-HRFVADDELHPEKEPVYGLLKEL 639
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 113/488 (23%), Positives = 211/488 (43%), Gaps = 88/488 (18%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL 124
R +F ++ + + ++ L+++ + + E L ++ M P +FT A L
Sbjct: 14 RQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGEL 73
Query: 125 ---TLGTQLHAHALL-LGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTEL 180
G +H + SD++V +++I MY+K G + A ++FDE+ + D+V+W+ +
Sbjct: 74 REVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSM 133
Query: 181 ITAYARNGDMNSARELFDEL----DVK-DKVAWTAMVTG--------------------- 214
++ + +NG A E F + DV D+V +V+
Sbjct: 134 VSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRG 193
Query: 215 --------------YAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDA- 259
YA++ KEA+ F+ + E D ++ + I+ Q GA+ +A
Sbjct: 194 FSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI----AEKDVISWSTVIACYVQNGAAAEAL 249
Query: 260 ---------------DWVRCIAESSGF-----------------GPARNVLVGSALVDMY 287
V C+ ++ G V V +ALVDMY
Sbjct: 250 LVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMY 309
Query: 288 SKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEM-LETEIKPNHVTF 346
KC + EEAY VF + ++ ++ ++I GF ++G A +I+ F M LE +P+ +
Sbjct: 310 MKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILM 369
Query: 347 VGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMP 406
V VL +C+ G ++Q + S + YG + A + +L R G L A ++ +
Sbjct: 370 VKVLGSCSELGFLEQAKCFHSYVIK-YGFDSNPFIGASLVELYSRCGSLGNASKVFNGIA 428
Query: 407 VEPNGAVWGALLGASHVHGNPDVAEIVSRHLF---ELEPNNIGNYLLLSNTYASAGRWDD 463
++ + VW +L+ +HG A H+ E++PN + +L + + + AG +
Sbjct: 429 LK-DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEV-TFLSILSACSHAGLIHE 486
Query: 464 VSRVRKLM 471
R+ KLM
Sbjct: 487 GLRIFKLM 494
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 2/163 (1%)
Query: 193 ARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQ 252
AR++F E+ + W ++ ++ +E L F + + D TL A+ AC +
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 253 LGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYS 312
L + + + ++ VGS+L+ MY KCG + EA +F +++ + T+S
Sbjct: 73 LREVNYGEMIHGFVKKD-VTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 313 SMIVGFAIHGRARAAIKLFYEM-LETEIKPNHVTFVGVLVACT 354
SM+ GF +G A++ F M + +++ P+ VT + ++ ACT
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 254 bits (650), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 245/486 (50%), Gaps = 45/486 (9%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQ--RITPISFTFSALFSAVTNL 124
LF ++P N ++A+I + + EAL L+ M+ ++P T +L A L
Sbjct: 253 LFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGL 312
Query: 125 -----TLGTQLHAHAL--------------------------------LLGFASDIFVNN 147
LG QLHA + LL + D+ N
Sbjct: 313 GVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCN 372
Query: 148 TMIKMYVKSGCLDSARKVFDEMPQ-RDVVSWTELITAYARNGDMNSARELFDELDVKDKV 206
+I Y+K+G L+ A +F+ + D VSWT +I Y GD++ A LF +L KD V
Sbjct: 373 IIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGV 432
Query: 207 AWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIA 266
WT M++G QN + EA + G++ T + +S+ + C+
Sbjct: 433 TWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVI 492
Query: 267 ESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARA 326
+ ++++ ++LV MY+KCG +E+AY +F M +++ +++SMI+G + HG A
Sbjct: 493 AKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADK 552
Query: 327 AIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMA 386
A+ LF EML++ KPN VTF+GVL AC+H+GL+ +G LF M+ Y + P DHY M
Sbjct: 553 ALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMI 612
Query: 387 DLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPD----VAEIVSRHLFELEP 442
DLLGRAG L++A + + +P P+ V+GALLG ++ +AE + L EL+P
Sbjct: 613 DLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDP 672
Query: 443 NNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVKH 502
N ++ L N YA GR D +RK M K +KK PG SWV NG + FL+GD
Sbjct: 673 VNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWV-VVNGRANVFLSGDKSA 731
Query: 503 PEINEI 508
E ++
Sbjct: 732 SEAAQM 737
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 135/302 (44%), Gaps = 53/302 (17%)
Query: 63 YPRLLFSQVP---SPNPFLY-SALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALF 118
+ R L ++P S N +Y ++L+ Y G EA L+ M + I T +A+
Sbjct: 60 HARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIV----TCNAML 115
Query: 119 SAVTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWT 178
+ + A L ++ M+ G + A ++FDEMP+R+VVSW
Sbjct: 116 TGYVKCRRMNE--AWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWN 173
Query: 179 ELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET 238
L+T RNGDM A+++FD + +D V+W AM+ GY +N +EA F + E
Sbjct: 174 TLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSE----- 228
Query: 239 DEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYN 298
+NV+ +++V Y + G+V EAY
Sbjct: 229 ------------------------------------KNVVTWTSMVYGYCRYGDVREAYR 252
Query: 299 VFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLE--TEIKPNHVTFVGVLVACTHA 356
+F M ERN ++++MI GFA + R A+ LF EM + + PN T + + AC
Sbjct: 253 LFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGL 312
Query: 357 GL 358
G+
Sbjct: 313 GV 314
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 113/221 (51%), Gaps = 16/221 (7%)
Query: 124 LTLGTQLHAHALL-----LGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWT 178
L+ G +HA LL G + + +++ Y K+G LD AR +F+ MP+R++V+
Sbjct: 53 LSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCN 112
Query: 179 ELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET 238
++T Y + MN A LF E+ K+ V+WT M+T + ++A+E F + E + +
Sbjct: 113 AMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVS 171
Query: 239 DEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYN 298
+ G I A + D + P+R+V+ +A++ Y + +EEA
Sbjct: 172 WNTLVTGLIRNGDMEKAKQVFDAM----------PSRDVVSWNAMIKGYIENDGMEEAKL 221
Query: 299 VFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEI 339
+F M E+N T++SM+ G+ +G R A +LF EM E I
Sbjct: 222 LFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNI 262
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/423 (34%), Positives = 242/423 (57%), Gaps = 52/423 (12%)
Query: 113 TFSALF-----SAVTNLTL-GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVF 166
+FS LF SA +L G Q+HA LGF + I + +++ Y G +D AR+VF
Sbjct: 64 SFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVF 123
Query: 167 DEMPQR-DVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEAL 225
DE P++ ++V WT +I+AY N +N++ EA+
Sbjct: 124 DETPEKQNIVLWTAMISAYTEN-----------------------------ENSV--EAI 152
Query: 226 EFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVD 285
E F+ + +E D V + A+SACA LGA + + + + A ++ + ++L++
Sbjct: 153 ELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLN 212
Query: 286 MYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEM------LETEI 339
MY K G E+A +F ++ TY+SMI G+A++G+A+ +++LF +M +T I
Sbjct: 213 MYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVI 272
Query: 340 KPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKAL 399
PN VTF+GVL+AC+H+GLV++G+ F +M Y + P H+ CM DL R+GHL+ A
Sbjct: 273 TPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAH 332
Query: 400 QLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAG 459
+ + MP++PN +W LLGA +HGN ++ E V R +FEL+ +++G+Y+ LSN YAS G
Sbjct: 333 EFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKG 392
Query: 460 RWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERL 519
WD+ S++R +R + + PG SW+E +I+EF++G P+ N+ + + ++ E L
Sbjct: 393 MWDEKSKMRDRVRKRRM---PGKSWIE-LGSIINEFVSG----PDNNDEQLMMGEISEVL 444
Query: 520 KAI 522
+ +
Sbjct: 445 RCL 447
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 139/306 (45%), Gaps = 39/306 (12%)
Query: 25 AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSP-NPFLYSALI 83
+Q+HA + + + I T+L+ + + Y R +F + P N L++A+I
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLV----GFYSSVGDVDYARQVFDETPEKQNIVLWTAMI 139
Query: 84 RAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL---TLGTQLHAHALLLG-- 138
AYT EA+ L+ M ++I + SA +L +G ++++ ++
Sbjct: 140 SAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRR 199
Query: 139 FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFD 198
A D+ + N+++ MYVKSG + ARK+FDE ++DV ++T +I YA NG + ELF
Sbjct: 200 LAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFK 259
Query: 199 ELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKD 258
++ D+ T + ++VT G + AC+ G ++
Sbjct: 260 KMKTIDQSQDTVIT-------------------------PNDVTFIGVLMACSHSGLVEE 294
Query: 259 ADW-VRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER-NAFTYSSMIV 316
+ + P R G +VD++ + G++++A+ M + N + +++
Sbjct: 295 GKRHFKSMIMDYNLKP-REAHFG-CMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLG 352
Query: 317 GFAIHG 322
++HG
Sbjct: 353 ACSLHG 358
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 149/467 (31%), Positives = 236/467 (50%), Gaps = 37/467 (7%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN--- 123
+F N +SA++ Y+ G EA++L++ M + I P +T + +A ++
Sbjct: 278 MFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICY 337
Query: 124 LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
L G QLH+ L LGF +F ++ MY
Sbjct: 338 LEEGKQLHSFLLKLGFERHLFATTALVDMY------------------------------ 367
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
A+ G + AR+ FD L +D WT++++GY QN+ +EAL +R ++ AG+ ++ T+
Sbjct: 368 -AKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTM 426
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
A + AC+ L + V GFG V +GSAL MYSKCG++E+ VFR
Sbjct: 427 ASVLKACSSLATLELGKQVHGHTIKHGFGL--EVPIGSALSTMYSKCGSLEDGNLVFRRT 484
Query: 304 KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQ 363
++ ++++MI G + +G+ A++LF EML ++P+ VTFV ++ AC+H G V++G
Sbjct: 485 PNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGW 544
Query: 364 YLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHV 423
+ F+ M G+ P DHYACM DLL RAG L++A + +E+ ++ +W LL A
Sbjct: 545 FYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKN 604
Query: 424 HGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYS 483
HG ++ L L Y+ LS Y + GR DV RV K MR + K G S
Sbjct: 605 HGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCS 664
Query: 484 WVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSS 530
W+E +N H F+ GD HP I E K + + ++ G++ L S
Sbjct: 665 WIELKNQY-HVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFVTVLDS 710
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 187/382 (48%), Gaps = 49/382 (12%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEA---LRLYTSMRNQRITPISFTFSALFSAVTN 123
+F+ + + +++LI Y+ G + + ++L+ MR Q I P ++T + +F A ++
Sbjct: 71 IFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESS 130
Query: 124 L---TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTEL 180
L T+G Q HA + + DI+V+ +++ MY K+G ++ KVF MP+R+ +
Sbjct: 131 LQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYT---- 186
Query: 181 ITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCL---REAGME 237
W+ MV+GYA +EA++ F +E G +
Sbjct: 187 ---------------------------WSTMVSGYATRGRVEEAIKVFNLFLREKEEGSD 219
Query: 238 TDEVTLA--GAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEE 295
+D V A +++A +G + + CI +G V + +ALV MYSKC ++ E
Sbjct: 220 SDYVFTAVLSSLAATIYVGLGRQ---IHCITIKNGL--LGFVALSNALVTMYSKCESLNE 274
Query: 296 AYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTH 355
A +F +RN+ T+S+M+ G++ +G + A+KLF M IKP+ T VGVL AC+
Sbjct: 275 ACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSD 334
Query: 356 AGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWG 415
+++G+ L S + G + D+ +AG L A + + + E + A+W
Sbjct: 335 ICYLEEGKQLHSFLLK-LGFERHLFATTALVDMYAKAGCLADARKGFDCLQ-ERDVALWT 392
Query: 416 ALLGASHVHGNPDVAEIVSRHL 437
+L+ + + + A I+ R +
Sbjct: 393 SLISGYVQNSDNEEALILYRRM 414
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 178/388 (45%), Gaps = 46/388 (11%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSM--RNQRITPISFTFSALFS---AV 121
+F+ +P N + +S ++ Y RG EA++++ + + + F+A+ S A
Sbjct: 175 VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAAT 234
Query: 122 TNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
+ LG Q+H + G + ++N ++ MY K L
Sbjct: 235 IYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL---------------------- 272
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
N A ++FD ++ + W+AMVTGY+QN EA++ F + AG++ E
Sbjct: 273 ---------NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEY 323
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
T+ G ++AC+ + ++ + GF R++ +ALVDMY+K G + +A F
Sbjct: 324 TIVGVLNACSDICYLEEGKQLHSFLLKLGF--ERHLFATTALVDMYAKAGCLADARKGFD 381
Query: 302 GMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
++ER+ ++S+I G+ + A+ L+ M I PN T VL AC+ ++
Sbjct: 382 CLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLEL 441
Query: 362 GQYLFSN-MEGCYGV-VPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALL- 418
G+ + + ++ +G+ VP + ++ + + G LE + P + W A++
Sbjct: 442 GKQVHGHTIKHGFGLEVPIG---SALSTMYSKCGSLEDGNLVFRRTP-NKDVVSWNAMIS 497
Query: 419 GASHVHGNPDVAEIVSRHLFE-LEPNNI 445
G SH + E+ L E +EP+++
Sbjct: 498 GLSHNGQGDEALELFEEMLAEGMEPDDV 525
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 101/210 (48%), Gaps = 32/210 (15%)
Query: 123 NLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELIT 182
NL G +H + G ++ I N ++ Y K G L A +F+ + +DVVSW LIT
Sbjct: 29 NLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLIT 88
Query: 183 AYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
Y++NG ++S ++T M + FR +R + + T
Sbjct: 89 GYSQNGGISS--------------SYTVM--------------QLFREMRAQDILPNAYT 120
Query: 243 LAGAISACAQLGASKDADWVRC-IAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
LAG A + L +S + + S FG ++ V ++LV MY K G VE+ VF
Sbjct: 121 LAGIFKAESSLQSSTVGRQAHALVVKMSSFG---DIYVDTSLVGMYCKAGLVEDGLKVFA 177
Query: 302 GMKERNAFTYSSMIVGFAIHGRARAAIKLF 331
M ERN +T+S+M+ G+A GR AIK+F
Sbjct: 178 YMPERNTYTWSTMVSGYATRGRVEEAIKVF 207
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 272 GPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHG---RARAAI 328
G + + + LV+ Y+KCG + +A+++F + ++ +++S+I G++ +G + +
Sbjct: 44 GASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVM 103
Query: 329 KLFYEMLETEIKPNHVTFVGVLVA---CTHAGLVDQGQYLFSNMEGCYGVVPSADHYACM 385
+LF EM +I PN T G+ A + + Q L M + +
Sbjct: 104 QLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTS----L 159
Query: 386 ADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVA-EIVSRHLFELEPNN 444
+ +AG +E L++ MP E N W ++ G + A ++ + L E E +
Sbjct: 160 VGMYCKAGLVEDGLKVFAYMP-ERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGS 218
Query: 445 IGNYL-------LLSNTYASAGR 460
+Y+ L + Y GR
Sbjct: 219 DSDYVFTAVLSSLAATIYVGLGR 241
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 133/416 (31%), Positives = 231/416 (55%), Gaps = 14/416 (3%)
Query: 78 LYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN---LTLGTQLHAHA 134
+Y+ LIR+Y G + +L L+T M + P + TF +L A + ++ G LH A
Sbjct: 53 VYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQA 112
Query: 135 LLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSAR 194
L GF D FV + ++ Y + G L+S+RK+FD++ VV+ L+ A RNG+M+ A
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 195 ELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCL---REAGMETDEVTLAGAISACA 251
E F + V D V+WT ++ G+++ + +AL F + A + +E T +S+CA
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 252 QLGASKDADWVRCIAESSGFGPARNVLVGSALV----DMYSKCGNVEEAYNVFRGMKERN 307
D +R + G+ ++ +++ + L DMY K G++E A +F ++++
Sbjct: 233 NF----DQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKK 288
Query: 308 AFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFS 367
++++I A +GR + A+++F M + + PN +T + +L AC + LVD G LFS
Sbjct: 289 VCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFS 348
Query: 368 NMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNP 427
++ Y ++P+++HY C+ DL+GRAG L A ++++P EP+ +V GALLGA +H N
Sbjct: 349 SICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENT 408
Query: 428 DVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYS 483
++ V + L L+P + G Y+ LS A W + ++RK M + ++K P YS
Sbjct: 409 ELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 156/462 (33%), Positives = 244/462 (52%), Gaps = 29/462 (6%)
Query: 43 IITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSM 102
II L H TT S LL + S FL++ L+R Y+L A LY +
Sbjct: 52 IIHQLHSHFTT--------SGFLLLHQKQNSGKLFLFNPLLRCYSLGETPLHAYFLYDQL 103
Query: 103 R--------NQRITPI-SFTFSALFSAVTNLTLGTQLHAHALL-----LGFASDIFVNNT 148
+ N+ + P SFT+ L A +N + L L LGF S ++V
Sbjct: 104 QRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTA 163
Query: 149 MIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAW 208
++ MY+ G + A KVFDEMP+R+ V+W +IT GD A +++ + V+W
Sbjct: 164 LVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSW 223
Query: 209 TAMVTGYAQNAMPKEALEFF-RCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAE 267
T ++ GYA+ PKEA+ F R + ++ +E+T+ + A LG K V
Sbjct: 224 TTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVG 283
Query: 268 SSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK--ERNAFTYSSMIVGFAIHGRAR 325
GF P ++ V ++L+D Y+KCG ++ A+ F + +N ++++MI FAIHG +
Sbjct: 284 KRGFVPC-DIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGK 342
Query: 326 AAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYL--FSNMEGCYGVVPSADHYA 383
A+ +F +M +KPN VT + VL AC+H GL ++ ++L F+ M Y + P HY
Sbjct: 343 EAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEE-EFLEFFNTMVNEYKITPDVKHYG 401
Query: 384 CMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPN 443
C+ D+L R G LE+A ++ +P+E VW LLGA V+ + ++AE V+R L ELE +
Sbjct: 402 CLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERS 461
Query: 444 NIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWV 485
+ G+Y+L+SN + GR+ D R RK M + + K PG+S V
Sbjct: 462 HGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 251 bits (642), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 150/471 (31%), Positives = 236/471 (50%), Gaps = 44/471 (9%)
Query: 22 LRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSA 81
LR K +H + R + T +L + Y R +F N +SA
Sbjct: 221 LREGKAVHGYCTRMGFSNDLVVKTGIL----DVYAKSKCIIYARRVFDLDFKKNEVTWSA 276
Query: 82 LIRAYTLRGPFTEALRLYTSM----RNQRITPISFTFSALFSA-VTNLTLGTQLHAHALL 136
+I Y EA ++ M +TP++ + A +L+ G +H +A+
Sbjct: 277 MIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVK 336
Query: 137 LGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSAREL 196
GF D+ V NT+I Y A+ G + A
Sbjct: 337 AGFILDLTVQNTIISFY-------------------------------AKYGSLCDAFRQ 365
Query: 197 FDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGAS 256
F E+ +KD +++ +++TG N P+E+ F +R +G+ D TL G ++AC+ L A
Sbjct: 366 FSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAAL 425
Query: 257 KDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIV 316
C G A N + +AL+DMY+KCG ++ A VF M +R+ ++++M+
Sbjct: 426 GHGS--SCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLF 483
Query: 317 GFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNME-GCYGV 375
GF IHG + A+ LF M ET + P+ VT + +L AC+H+GLVD+G+ LF++M G + V
Sbjct: 484 GFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNV 543
Query: 376 VPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSR 435
+P DHY CM DLL RAG+L++A V MP EP+ V G LL A + N ++ VS+
Sbjct: 544 IPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSK 603
Query: 436 HLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVE 486
+ L + +LLSNTY++A RW+D +R+R + + + L K PGYSWV+
Sbjct: 604 KMQSLGETT-ESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVD 653
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 171/376 (45%), Gaps = 56/376 (14%)
Query: 13 VSILNTCTTLRR---AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFS 69
+S+L TC R + +H H+ + +L SS + +L +LT + R +F
Sbjct: 3 LSLLETCIRSRNLVLGQVIHQHLLKRSLTLSS---STVLVNLTRLYASCNEVELARHVFD 59
Query: 70 QVPSP--NPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL- 126
++P P NP + +IRAY +AL LY M N + P +T+ + A L
Sbjct: 60 EIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAI 119
Query: 127 --GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAY 184
G +H+H FA+D++V ++ Y K G L+ A KVFDEMP+RD+V+W +I+ +
Sbjct: 120 DDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGF 179
Query: 185 ARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLA 244
+ + + LF LD++ R G+ + T+
Sbjct: 180 SLHCCLTDVIGLF--LDMR----------------------------RIDGLSPNLSTIV 209
Query: 245 GAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK 304
G A + GA ++ V GF + +++V + ++D+Y+K + A VF
Sbjct: 210 GMFPALGRAGALREGKAVHGYCTRMGF--SNDLVVKTGILDVYAKSKCIIYARRVFDLDF 267
Query: 305 ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQY 364
++N T+S+MI G+ + + A ++F++ML + VT V + GL+ G
Sbjct: 268 KKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVND-NVAMVTPVAI-------GLILMGCA 319
Query: 365 LFSNMEG-----CYGV 375
F ++ G CY V
Sbjct: 320 RFGDLSGGRCVHCYAV 335
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/500 (28%), Positives = 253/500 (50%), Gaps = 41/500 (8%)
Query: 26 KQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFL-YSALIR 84
KQ+HA + + L I ++ +++ S + +F + + ++++I
Sbjct: 223 KQVHAKVLKLGLQHEITICNAMI----SSYADCGSVSDAKRVFDGLGGSKDLISWNSMIA 278
Query: 85 AYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT---NLTLGTQLHAHALLLGFAS 141
++ A L+ M+ + +T++ L SA + + G LH + G
Sbjct: 279 GFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQ 338
Query: 142 DIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELD 201
N +I MY+ + P G M A LF+ L
Sbjct: 339 VTSATNALISMYI-------------QFP----------------TGTMEDALSLFESLK 369
Query: 202 VKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADW 261
KD ++W +++TG+AQ + ++A++FF LR + ++ D+ + + +C+ L +
Sbjct: 370 SKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQ 429
Query: 262 VRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNA-FTYSSMIVGFAI 320
+ +A SGF N V S+L+ MYSKCG +E A F+ + +++ +++MI+G+A
Sbjct: 430 IHALATKSGF--VSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQ 487
Query: 321 HGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSAD 380
HG + ++ LF +M +K +HVTF +L AC+H GL+ +G L + ME Y + P +
Sbjct: 488 HGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRME 547
Query: 381 HYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFEL 440
HYA DLLGRAG + KA +L+E+MP+ P+ V LG G ++A V+ HL E+
Sbjct: 548 HYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEI 607
Query: 441 EPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDV 500
EP + Y+ LS+ Y+ +W++ + V+K+M+++ +KK PG+SW+E RN V F A D
Sbjct: 608 EPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQV-KAFNAEDR 666
Query: 501 KHPEINEIKKALDDLLERLK 520
+P +I + DL + ++
Sbjct: 667 SNPLCQDIYMMIKDLTQEMQ 686
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 135/296 (45%), Gaps = 36/296 (12%)
Query: 63 YPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALF---S 119
Y +LF ++P + ++ +I YT G +A L+T M+ ++FS L +
Sbjct: 53 YANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIA 112
Query: 120 AVTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTE 179
+V LG Q+H + G+ +++V ++++ MY K ++ A + F E+ + + VSW
Sbjct: 113 SVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNA 172
Query: 180 LITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETD 239
LI + + D+ +A L +++K V +AG
Sbjct: 173 LIAGFVQVRDIKTAFWLLGLMEMKAAVT------------------------MDAGTFAP 208
Query: 240 EVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNV 299
+TL C L + A+ G + + +A++ Y+ CG+V +A V
Sbjct: 209 LLTLLDDPMFCNLLK--------QVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRV 260
Query: 300 FRGM-KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACT 354
F G+ ++ +++SMI GF+ H +A +LF +M ++ + T+ G+L AC+
Sbjct: 261 FDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 33/188 (17%)
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDM 190
H +A+ G SDI+V+N ++ Y+K G L A +FDEMP+RD VSW +I+ Y G +
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 191 NSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISAC 250
AW F C++ +G + D + + +
Sbjct: 83 ED--------------AWC-----------------LFTCMKRSGSDVDGYSFSRLLKGI 111
Query: 251 AQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFT 310
A + + V + G+ NV VGS+LVDMY+KC VE+A+ F+ + E N+ +
Sbjct: 112 ASVKRFDLGEQVHGLVIKGGY--ECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVS 169
Query: 311 YSSMIVGF 318
++++I GF
Sbjct: 170 WNALIAGF 177
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 152/500 (30%), Positives = 249/500 (49%), Gaps = 32/500 (6%)
Query: 38 HQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALR 97
++SS + N L + F ++ I R LF ++ + ++A+I Y G ++EA
Sbjct: 175 YKSSLYVCNALISMYKRFRNMGI---ARRLFDRMFERDAVSWNAVINCYASEGMWSEAFE 231
Query: 98 LYTSMRNQRITPISFTFS----------------ALFSAVTNLTLGTQLHAHALLLGFAS 141
L+ M + T++ L S + N T L A+++G +
Sbjct: 232 LFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFP--TSLDPVAMIIGLKA 289
Query: 142 DIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELD 201
+ + + + S+ D + LIT Y++ D+ A +F + +
Sbjct: 290 CSLIGAIRLGKEIHGLAIHSSYDGIDNVRN-------TLITMYSKCKDLRHALIVFRQTE 342
Query: 202 VKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADW 261
W ++++GYAQ +EA R + AG + + +TLA + CA++ +
Sbjct: 343 ENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKE 402
Query: 262 VRC-IAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAI 320
C I F ++ ++LVD+Y+K G + A V M +R+ TY+S+I G+
Sbjct: 403 FHCYILRRKCF--KDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGN 460
Query: 321 HGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSAD 380
G A+ LF EM + IKP+HVT V VL AC+H+ LV +G+ LF M+ YG+ P
Sbjct: 461 QGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQ 520
Query: 381 HYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFEL 440
H++CM DL GRAG L KA ++ MP +P+GA W LL A H+HGN + + + L E+
Sbjct: 521 HFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEM 580
Query: 441 EPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDV 500
+P N G Y+L++N YA+AG W ++ VR +MRD +KK+PG +W+++ +G F GD
Sbjct: 581 KPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSG-FSLFSVGDT 639
Query: 501 KHPEINEIKKALDDLLERLK 520
PE LD L + +K
Sbjct: 640 SSPEACNTYPLLDGLNQLMK 659
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 164/360 (45%), Gaps = 16/360 (4%)
Query: 14 SILNTCTTLRR---AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
S+L+ C +R Q+HAH + S ++ L+ T + +H+ + +
Sbjct: 48 SLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLV----TFYSAFNLHNEAQSIIEN 103
Query: 71 VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTNLTLG 127
+P ++ LI +Y F E + Y M ++ I P +FT+ ++ A ++ G
Sbjct: 104 SDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFG 163
Query: 128 TQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARN 187
+H + + S ++V N +I MY + + AR++FD M +RD VSW +I YA
Sbjct: 164 RVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASE 223
Query: 188 GDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
G + A ELFD++ + W + G Q AL +R D V +
Sbjct: 224 GMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAM 283
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
+ AC+ +GA + + +A S + NV + L+ MYSKC ++ A VFR
Sbjct: 284 IIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVR--NTLITMYSKCKDLRHALIVFRQT 341
Query: 304 KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQ 363
+E + T++S+I G+A ++ A L EML +PN +T +L C + G+
Sbjct: 342 EENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGK 401
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/486 (30%), Positives = 249/486 (51%), Gaps = 55/486 (11%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN- 123
R +F + N +A+I + LRL++ MR + P S T+ + +A +
Sbjct: 210 RGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGS 269
Query: 124 --LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
+ G Q+HA G S++ + + ++ MY K G ++ A +F+ S TE+
Sbjct: 270 QRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFE--------STTEV- 320
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
D+V+ T ++ G AQN +EA++FF + +AG+E D
Sbjct: 321 ----------------------DEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDAN 358
Query: 242 TLAGAISAC---AQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYN 298
++ + LG K + + SG N V + L++MYSKCG++ ++
Sbjct: 359 VVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSG-----NTFVNNGLINMYSKCGDLTDSQT 413
Query: 299 VFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGL 358
VFR M +RN +++SMI FA HG AA+KL+ EM E+KP VTF+ +L AC+H GL
Sbjct: 414 VFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGL 473
Query: 359 VDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALL 418
+D+G+ L + M+ +G+ P +HY C+ D+LGRAG L++A ++++P++P+ +W ALL
Sbjct: 474 IDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALL 533
Query: 419 GASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKK 478
GA HG+ +V E + LF+ P++ ++L++N Y+S G+W + ++ K M+ + K
Sbjct: 534 GACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTK 593
Query: 479 NPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDK 538
G S +E + H F+ D HP+ I L L + GY P
Sbjct: 594 ETGISSIEIEHKT-HSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRP------------ 640
Query: 539 EKRFLL 544
+KRF+L
Sbjct: 641 DKRFIL 646
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 155/349 (44%), Gaps = 44/349 (12%)
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGD 189
+HA A+L G+ +I V N +I Y K GC S R VFD M R+V++
Sbjct: 177 IHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVIT------------- 223
Query: 190 MNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISA 249
TA+++G +N + ++ L F +R + + VT A++A
Sbjct: 224 ------------------LTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAA 265
Query: 250 CAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAF 309
C+ G+ + + + A +G + + SAL+DMYSKCG++E+A+ +F E +
Sbjct: 266 CS--GSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEV 323
Query: 310 TYSSMIVGFAIHGRARAAIKLFYEMLE--TEIKPNHVTFV-GVLVACTHAGLVDQGQYLF 366
+ + ++VG A +G AI+ F ML+ EI N V+ V GV GL Q L
Sbjct: 324 SMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLV 383
Query: 367 SNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGN 426
+ + + ++ + G L + + MP + N W +++ A HG+
Sbjct: 384 IKRKFSGNTFVNNG----LINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAAFARHGH 438
Query: 427 PDVAEIVSRHL--FELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRD 473
A + + E++P ++ +L L + + G D + M++
Sbjct: 439 GLAALKLYEEMTTLEVKPTDV-TFLSLLHACSHVGLIDKGRELLNEMKE 486
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 108/231 (46%), Gaps = 4/231 (1%)
Query: 174 VVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLRE 233
+V W L++ YA+ G + A +LFDE+ ++D ++ + G+ +N + + +
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 234 AGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNV 293
+G D TL +S C + +A SG+ + + VG+ L+ Y KCG
Sbjct: 150 SG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYD--KEISVGNKLITSYFKCGCS 206
Query: 294 EEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVAC 353
VF GM RN T +++I G + ++LF M + PN VT++ L AC
Sbjct: 207 VSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAAC 266
Query: 354 THAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVET 404
+ + + +GQ + + + YG+ + + D+ + G +E A + E+
Sbjct: 267 SGSQRIVEGQQIHALLWK-YGIESELCIESALMDMYSKCGSIEDAWTIFES 316
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 172/588 (29%), Positives = 281/588 (47%), Gaps = 89/588 (15%)
Query: 13 VSILNTCTTLRR-AKQLHAH-IYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
+ L + + L+R Q+HA I NL S I R L + + SY R +F +
Sbjct: 20 IKFLQSISKLKRHITQIHAFVISTGNLLNGSSIS----RDLIASCGRIGEISYARKVFDE 75
Query: 71 VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPIS--FTFSA------------ 116
+P +Y+++I Y+ E LRLY M ++I P S FT +
Sbjct: 76 LPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKG 135
Query: 117 -----------------LFSAVTNLTL--GTQLHAHALLLGFAS-DIFVNNTMIKMYVKS 156
+ S+V NL + G A L A D+ TM+ + ++
Sbjct: 136 EAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQA 195
Query: 157 GCLDSARKVFDEMPQR---------------------------------------DVVSW 177
G A + + EM +VV
Sbjct: 196 GKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVE 255
Query: 178 TELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGME 237
T L+ YA+ G + A +F + K V+W ++++G+AQN + +A E ++ G +
Sbjct: 256 TSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQ 315
Query: 238 TDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVL---VGSALVDMYSKCGNVE 294
D VTL G + AC+Q+G+ K V C + R+VL +AL+DMYSKCG +
Sbjct: 316 PDLVTLVGVLVACSQVGSLKTGRLVHC------YILKRHVLDRVTATALMDMYSKCGALS 369
Query: 295 EAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACT 354
+ +F + ++ +++MI + IHG + + LF +M E+ I+P+H TF +L A +
Sbjct: 370 SSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALS 429
Query: 355 HAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVW 414
H+GLV+QGQ+ FS M Y + PS HY C+ DLL RAG +E+AL ++ + ++ +W
Sbjct: 430 HSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIW 489
Query: 415 GALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDK 474
ALL H N V +I + + +L P++IG L+SN +A+A +W +V++VRKLMR+
Sbjct: 490 VALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNG 549
Query: 475 NLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAI 522
++K PGYS +E NG + FL D+ H E + + L +L ++ +
Sbjct: 550 AMEKVPGYSAIEV-NGELRTFLMEDLSHHEHYHMLQVLRNLKTEIRDV 596
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 227/431 (52%), Gaps = 44/431 (10%)
Query: 61 HSYPRLL--FSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSM-RNQRITPISFTFSAL 117
H +P L F +P N F ++ +I ++ G ++++ L+ M R + P FT +
Sbjct: 81 HLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLI 140
Query: 118 F---SAVTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDV 174
SA G +H L LGF+S +FV++ ++ MYV G L ARK+FD+MP RD
Sbjct: 141 LRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDS 200
Query: 175 VSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREA 234
V +T AM GY Q L FR + +
Sbjct: 201 VLYT-------------------------------AMFGGYVQQGEAMLGLAMFREMGYS 229
Query: 235 GMETDEVTLAGAISACAQLGASKDADWVR--CIAESSGFGPARNVLVGSALVDMYSKCGN 292
G D V + + AC QLGA K V CI S G + +G+A+ DMY KC
Sbjct: 230 GFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLG----LNLGNAITDMYVKCSI 285
Query: 293 VEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVA 352
++ A+ VF M R+ ++SS+I+G+ + G + KLF EML+ I+PN VTF+GVL A
Sbjct: 286 LDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSA 345
Query: 353 CTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGA 412
C H GLV++ F M+ Y +VP HYA +AD + RAG LE+A + +E MPV+P+ A
Sbjct: 346 CAHGGLVEKSWLYFRLMQE-YNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEA 404
Query: 413 VWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMR 472
V GA+L V+GN +V E V+R L +L+P Y+ L+ Y++AGR+D+ +R+ M+
Sbjct: 405 VMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMK 464
Query: 473 DKNLKKNPGYS 483
+K + K PG S
Sbjct: 465 EKQISKVPGCS 475
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 144/461 (31%), Positives = 250/461 (54%), Gaps = 19/461 (4%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL 126
LF ++P N ++++++A RG EA+ L+ M + + +S+T + V L
Sbjct: 162 LFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV--VSWT-----AMVDGLAK 214
Query: 127 GTQLHAHALLLGF--ASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAY 184
++ L +I N MI Y ++ +D A ++F MP+RD SW +IT +
Sbjct: 215 NGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGF 274
Query: 185 ARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFF-RCLREAGMETDEVTL 243
RN +MN A LFD + K+ ++WT M+TGY +N +EAL F + LR+ ++ + T
Sbjct: 275 IRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTY 334
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG- 302
+SAC+ L + + + S +N +V SAL++MYSK G + A +F
Sbjct: 335 VSILSACSDLAGLVEGQQIHQLISKSVH--QKNEIVTSALLNMYSKSGELIAARKMFDNG 392
Query: 303 -MKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
+ +R+ +++SMI +A HG + AI+++ +M + KP+ VT++ +L AC+HAGLV++
Sbjct: 393 LVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEK 452
Query: 362 GQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGAS 421
G F ++ + +HY C+ DL GRAG L+ + + + +GA+L A
Sbjct: 453 GMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSAC 512
Query: 422 HVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPG 481
+VH +A+ V + + E ++ G Y+L+SN YA+ G+ ++ + +R M++K LKK PG
Sbjct: 513 NVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPG 572
Query: 482 YSWVE--SRNGVIHEFLAGDVKHPEINEIKKALDDLLERLK 520
SWV+ +N H F+ GD HP+ + L DL +++
Sbjct: 573 CSWVKVGKQN---HLFVVGDKSHPQFEALDSILSDLRNKMR 610
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 152/303 (50%), Gaps = 20/303 (6%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL 124
R LF +P + ++ +I Y G EA L+ + + R +++T + V+
Sbjct: 66 RKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV-DSRKNVVTWT-----AMVSGY 119
Query: 125 TLGTQLHAHALLLGF--ASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELIT 182
QL +L ++ NTMI Y +SG +D A ++FDEMP+R++VSW ++
Sbjct: 120 LRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVK 179
Query: 183 AYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
A + G ++ A LF+ + +D V+WTAMV G A+N EA F C+ E + ++
Sbjct: 180 ALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI----IS 235
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
I+ AQ +AD + + P R+ + ++ + + + +A +F
Sbjct: 236 WNAMITGYAQNNRIDEADQLFQVM------PERDFASWNTMITGFIRNREMNKACGLFDR 289
Query: 303 MKERNAFTYSSMIVGFAIHGRARAAIKLFYEML-ETEIKPNHVTFVGVLVACTH-AGLVD 360
M E+N ++++MI G+ + A+ +F +ML + +KPN T+V +L AC+ AGLV+
Sbjct: 290 MPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVE 349
Query: 361 QGQ 363
Q
Sbjct: 350 GQQ 352
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 149/307 (48%), Gaps = 29/307 (9%)
Query: 149 MIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDV-KDKVA 207
+I K G + ARK+FD +P+RDVV+WT +IT Y + GDM ARELFD +D K+ V
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 208 WTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAE 267
WTAMV+GY ++ A F+ + E + V+ I AQ G A E
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPERNV----VSWNTMIDGYAQSGRIDKA------LE 161
Query: 268 SSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAA 327
P RN++ +++V + G ++EA N+F M R+ ++++M+ G A +G+ A
Sbjct: 162 LFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEA 221
Query: 328 IKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMAD 387
+LF M E I +++ ++ +D+ LF V+P D +
Sbjct: 222 RRLFDCMPERNI----ISWNAMITGYAQNNRIDEADQLFQ-------VMPERDFASWNTM 270
Query: 388 LLG--RAGHLEKALQLVETMPVEPNGAVWGALL-GASHVHGNPDVAEIVSRHLFE--LEP 442
+ G R + KA L + MP E N W ++ G N + + S+ L + ++P
Sbjct: 271 ITGFIRNREMNKACGLFDRMP-EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKP 329
Query: 443 NNIGNYL 449
N+G Y+
Sbjct: 330 -NVGTYV 335
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 151/479 (31%), Positives = 245/479 (51%), Gaps = 62/479 (12%)
Query: 22 LRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRL--------LFSQVPS 73
+R KQ+H + + + Y+ +L +H Y +F ++P
Sbjct: 122 IREGKQIHGIVTKMGFYDDIYVQNSL------------VHFYGVCGESRNACKVFGEMPV 169
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTNLTLGTQL 130
+ ++ +I +T G + EAL ++ M + P T+ + + V L+LG +
Sbjct: 170 RDVVSWTGIITGFTRTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGI 226
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDM 190
H L + N +I MYVK L A +V
Sbjct: 227 HGLILKRASLISLETGNALIDMYVKCEQLSDAMRV------------------------- 261
Query: 191 NSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLR-EAGMETDEVTLAGAISA 249
F EL+ KDKV+W +M++G KEA++ F ++ +G++ D L +SA
Sbjct: 262 ------FGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSA 315
Query: 250 CAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAF 309
CA LGA WV ++G + +G+A+VDMY+KCG +E A +F G++ +N F
Sbjct: 316 CASLGAVDHGRWVHEYILTAGI--KWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVF 373
Query: 310 TYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNM 369
T+++++ G AIHG +++ F EM++ KPN VTF+ L AC H GLVD+G+ F M
Sbjct: 374 TWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKM 433
Query: 370 EGC-YGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGN-P 427
+ Y + P +HY CM DLL RAG L++AL+LV+ MPV+P+ + GA+L A G
Sbjct: 434 KSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLM 493
Query: 428 DVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVE 486
++ + + ++E + G Y+LLSN +A+ RWDDV+R+R+LM+ K + K PG S++E
Sbjct: 494 ELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 189/424 (44%), Gaps = 54/424 (12%)
Query: 12 VVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
++ +++ C++LR KQ+ + +L + II ++ L + SY ++ +
Sbjct: 9 LLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKS---ADFASYSSVILHSI 65
Query: 72 PSP-NPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV---TNLTLG 127
S + F Y+ L+ +Y + + Y + + +P FTF +F A + + G
Sbjct: 66 RSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREG 125
Query: 128 TQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARN 187
Q+H +GF DI+V N+++ Y
Sbjct: 126 KQIHGIVTKMGFYDDIYVQNSLVHFY-------------------------------GVC 154
Query: 188 GDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAI 247
G+ +A ++F E+ V+D V+WT ++TG+ + + KEAL+ F + +E + T +
Sbjct: 155 GESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTF---SKMDVEPNLATYVCVL 211
Query: 248 SACAQLGASKDADWVRCIAESSGFGPARNVLV----GSALVDMYSKCGNVEEAYNVFRGM 303
+ ++G + G R L+ G+AL+DMY KC + +A VF +
Sbjct: 212 VSSGRVGCLSLGKGIH------GLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGEL 265
Query: 304 KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETE-IKPNHVTFVGVLVACTHAGLVDQG 362
++++ +++SMI G R++ AI LF M + IKP+ VL AC G VD G
Sbjct: 266 EKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHG 325
Query: 363 QYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASH 422
+++ + G+ + D+ + G++E AL++ + N W ALLG
Sbjct: 326 RWVHEYILTA-GIKWDTHIGTAIVDMYAKCGYIETALEIFNGIR-SKNVFTWNALLGGLA 383
Query: 423 VHGN 426
+HG+
Sbjct: 384 IHGH 387
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 248 bits (634), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 148/501 (29%), Positives = 253/501 (50%), Gaps = 38/501 (7%)
Query: 16 LNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPN 75
L C LR+ K A I+ H + + + L T + LF + +
Sbjct: 216 LKACAGLRQVKYGKA-IHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERD 274
Query: 76 PFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTNLTLGTQLHA 132
+++LI AY G +A+ + MRN ++ P TF+++FSA ++ L G QLH
Sbjct: 275 VVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHC 334
Query: 133 HALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNS 192
+ L LG + V+N+M+KMY S C G++ S
Sbjct: 335 NVLSLGLNDSLSVSNSMMKMY--STC-----------------------------GNLVS 363
Query: 193 ARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQ 252
A LF + +D ++W+ ++ GY Q +E ++F +R++G + + LA +S
Sbjct: 364 ASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGN 423
Query: 253 LGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYS 312
+ + V +A FG +N V S+L++MYSKCG+++EA +F + + +
Sbjct: 424 MAVIEGGRQVHALALC--FGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLT 481
Query: 313 SMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGC 372
+MI G+A HG+++ AI LF + L+ +P+ VTF+ VL ACTH+G +D G + F+ M+
Sbjct: 482 AMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQET 541
Query: 373 YGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEI 432
Y + P+ +HY CM DLL RAG L A +++ M + + VW LL A G+ +
Sbjct: 542 YNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRR 601
Query: 433 VSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVI 492
+ + EL+P + L+N Y+S G ++ + VRK M+ K + K PG+S ++ ++ +
Sbjct: 602 AAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKD-CV 660
Query: 493 HEFLAGDVKHPEINEIKKALD 513
F++GD HP+ +I L+
Sbjct: 661 SAFVSGDRFHPQSEDIYNILE 681
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 161/361 (44%), Gaps = 40/361 (11%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMR--NQRITPISFTFSALFSAV- 121
R +F ++P + ++++I+ Y EAL L+++MR + ++P + S + A
Sbjct: 60 RQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACG 119
Query: 122 --TNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTE 179
+N+ G LHA+A+ S ++V ++++ MY + G +D + +V
Sbjct: 120 QSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRV-------------- 165
Query: 180 LITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETD 239
F E+ ++ V WTA++TG KE L +F + + +D
Sbjct: 166 -----------------FSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSD 208
Query: 240 EVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNV 299
T A A+ ACA L K + GF + V ++L MY++CG +++ +
Sbjct: 209 TYTFAIALKACAGLRQVKYGKAIHTHVIVRGF--VTTLCVANSLATMYTECGEMQDGLCL 266
Query: 300 FRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLV 359
F M ER+ +++S+IV + G+ A++ F +M +++ PN TF + AC +
Sbjct: 267 FENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRL 326
Query: 360 DQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLG 419
G+ L N+ G+ S M + G+L A L + M + W ++G
Sbjct: 327 VWGEQLHCNVLS-LGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCR-DIISWSTIIG 384
Query: 420 A 420
Sbjct: 385 G 385
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 114/240 (47%), Gaps = 16/240 (6%)
Query: 188 GDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLR--EAGMETDEVTLAG 245
G++ +AR++FD++ D V+WT+++ Y EAL F +R + + D L+
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 246 AISACAQ-----LGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
+ AC Q G S A V+ SS V VGS+L+DMY + G ++++ VF
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSS-------VYVGSSLLDMYKRVGKIDKSCRVF 166
Query: 301 RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVD 360
M RNA T++++I G GR + + F EM +E + TF L AC V
Sbjct: 167 SEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVK 226
Query: 361 QGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGA 420
G+ + +++ G V + +A + G ++ L L E M E + W +L+ A
Sbjct: 227 YGKAIHTHVI-VRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS-ERDVVSWTSLIVA 284
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 248 bits (633), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 139/435 (31%), Positives = 223/435 (51%), Gaps = 40/435 (9%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN- 123
R +F ++ + ++ +I YT G AL L M+ + + P + T ++L S +
Sbjct: 273 RFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDA 332
Query: 124 --LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
+ G LH A+ SDI + T LI
Sbjct: 333 LKVNDGKCLHGWAVRQQVYSDIIIE-------------------------------TSLI 361
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
+ YA+ ++ +F W+A++ G QN + +AL F+ +R +E +
Sbjct: 362 SMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIA 421
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
TL + A A L + A + C +GF + + G LV +YSKCG +E A+ +F
Sbjct: 422 TLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATG--LVHVYSKCGTLESAHKIFN 479
Query: 302 GMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAG 357
G++E+ + + ++I G+ +HG A+++F EM+ + + PN +TF L AC+H+G
Sbjct: 480 GIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSG 539
Query: 358 LVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGAL 417
LV++G LF M Y + ++HY C+ DLLGRAG L++A L+ T+P EP VWGAL
Sbjct: 540 LVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGAL 599
Query: 418 LGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLK 477
L A H N + E+ + LFELEP N GNY+LL+N YA+ GRW D+ +VR +M + L+
Sbjct: 600 LAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLR 659
Query: 478 KNPGYSWVESRNGVI 492
K PG+S +E R+ +
Sbjct: 660 KKPGHSTIEIRSNSV 674
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 166/363 (45%), Gaps = 46/363 (12%)
Query: 11 QVVSILN---TCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLL 67
Q S+LN ++ + K LH H+ + ++L L+ T+ +Y R L
Sbjct: 17 QYQSLLNHFAATQSISKTKALHCHVI-----TGGRVSGHILSTLSVTYALCGHITYARKL 71
Query: 68 FSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQ--RITPISFTFSALFSA---VT 122
F ++P + Y+ +IR Y G + +A+ ++ M ++ + P +T+ + A +
Sbjct: 72 FEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELK 131
Query: 123 NLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELIT 182
++ LG +H L F D +V N ++ MY+ G ++ AR VFD M RDV+SW +I+
Sbjct: 132 SMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMIS 191
Query: 183 AYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
Y RNG MN A +FD W M E+++ D T
Sbjct: 192 GYYRNGYMNDALMMFD---------W-----------MVNESVDL-----------DHAT 220
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
+ + C L + V + E G + V +ALV+MY KCG ++EA VF
Sbjct: 221 IVSMLPVCGHLKDLEMGRNVHKLVEEKRLGD--KIEVKNALVNMYLKCGRMDEARFVFDR 278
Query: 303 MKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQG 362
M+ R+ T++ MI G+ G A++L M ++PN VT ++ C A V+ G
Sbjct: 279 MERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDG 338
Query: 363 QYL 365
+ L
Sbjct: 339 KCL 341
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 175/409 (42%), Gaps = 52/409 (12%)
Query: 28 LHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIRAYT 87
+H I R + Y+ N L + F + + R +F + + + ++ +I Y
Sbjct: 139 VHGRILRSWFGRDKYV-QNALLAMYMNFGKVEM---ARDVFDVMKNRDVISWNTMISGYY 194
Query: 88 LRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTNLTLGTQLHAHALLLGFASDIF 144
G +AL ++ M N+ + T ++ + +L +G +H I
Sbjct: 195 RNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIE 254
Query: 145 VNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKD 204
V N ++ MY+K G +D AR VFD M +RDV++WT +I Y +GD+
Sbjct: 255 VKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDV-------------- 300
Query: 205 KVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRC 264
+ ALE R ++ G+ + VT+A +S C D +
Sbjct: 301 -----------------ENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHG 343
Query: 265 IAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRA 324
A ++++ ++L+ MY+KC V+ + VF G + + +S++I G +
Sbjct: 344 WAVRQQV--YSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELV 401
Query: 325 RAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCY----GVVPSAD 380
A+ LF M +++PN T +L A +A L D Q + N+ CY G + S D
Sbjct: 402 SDALGLFKRMRREDVEPNIATLNSLLPA--YAALADLRQAM--NIH-CYLTKTGFMSSLD 456
Query: 381 HYACMADLLGRAGHLEKALQL---VETMPVEPNGAVWGALLGASHVHGN 426
+ + + G LE A ++ ++ + +WGAL+ +HG+
Sbjct: 457 AATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 114/281 (40%), Gaps = 47/281 (16%)
Query: 178 TELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGME 237
+ L YA G + AR+LF+E+ +++ ++ Y + + +A+ F + G++
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK 112
Query: 238 T--DEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEE 295
D T A +L + K V S FG R+ V +AL+ MY G VE
Sbjct: 113 CVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFG--RDKYVQNALLAMYMNFGKVEM 170
Query: 296 AYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTH 355
A +VF MK R+ ++++MI G+ +G A+ +F M+ + +H T V +L C H
Sbjct: 171 ARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGH 230
Query: 356 -----------------------------------AGLVDQGQYLFSNMEGCYGVVPSAD 380
G +D+ +++F ME
Sbjct: 231 LKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMER-----RDVI 285
Query: 381 HYACMADLLGRAGHLEKALQLVETMPVE---PNGAVWGALL 418
+ CM + G +E AL+L M E PN +L+
Sbjct: 286 TWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLV 326
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 150/485 (30%), Positives = 243/485 (50%), Gaps = 46/485 (9%)
Query: 15 ILNTCTTLRRAK---QLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
+L C+ LR + +H + + + Y+ T LL H+ + +Y +F +
Sbjct: 113 VLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLL-HMYMCCGEV---NYGLRVFEDI 168
Query: 72 PSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV---TNLTLGT 128
P N + +LI + F++A+ + M++ + L A ++ G
Sbjct: 169 PQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGK 228
Query: 129 QLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNG 188
H LGF F +V+ T LI YA+ G
Sbjct: 229 WFHGFLQGLGF-----------------------DPYFQSKVGFNVILATSLIDMYAKCG 265
Query: 189 DMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL----- 243
D+ +AR LFD + + V+W +++TGY+QN +EAL F + + G+ D+VT
Sbjct: 266 DLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIR 325
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
A I C+QLG S + +GF ++ + ALV+MY+K G+ E A F +
Sbjct: 326 ASMIQGCSQLGQS-----IHAYVSKTGF--VKDAAIVCALVNMYAKTGDAESAKKAFEDL 378
Query: 304 KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLET-EIKPNHVTFVGVLVACTHAGLVDQG 362
++++ ++ +I+G A HG A+ +F M E P+ +T++GVL AC+H GLV++G
Sbjct: 379 EKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEG 438
Query: 363 QYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASH 422
Q F+ M +G+ P+ +HY CM D+L RAG E+A +LV+TMPV+PN +WGALL
Sbjct: 439 QRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCD 498
Query: 423 VHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGY 482
+H N ++ + + + E E G Y+LLSN YA AGRW DV +R+ M+ K + K G+
Sbjct: 499 IHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGH 558
Query: 483 SWVES 487
S VE+
Sbjct: 559 SSVET 563
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 128/508 (25%), Positives = 230/508 (45%), Gaps = 83/508 (16%)
Query: 12 VVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
++S L C +L QLH + + ++ ++ ++ L+ TT P SY R +F +
Sbjct: 9 ILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLI-DFCTTCPETMNLSYARSVFESI 67
Query: 72 PSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL---TLGT 128
P+ ++++++IR Y+ +AL Y M + +P FTF + A + L G+
Sbjct: 68 DCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGS 127
Query: 129 QLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNG 188
+H + GF +++V+ ++ MY+ G ++ +VF+++PQ +VV+W LI+ + N
Sbjct: 128 CVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNN 187
Query: 189 DMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAIS 248
+ +A+E FR ++ G++ +E + +
Sbjct: 188 RFS-------------------------------DAIEAFREMQSNGVKANETIMVDLLV 216
Query: 249 ACAQLGASKDADWVRCIAESSGFGP------ARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
AC + W + GF P NV++ ++L+DMY+KCG++ A +F G
Sbjct: 217 ACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDG 276
Query: 303 MKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQG 362
M ER +++S+I G++ +G A A+ +F +ML+ I P+ VTF+ V+ A G G
Sbjct: 277 MPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLG 336
Query: 363 QYLFS------------------NMEGCYGVVPSA----------DHYACMADLLGRA-- 392
Q + + NM G SA D A ++G A
Sbjct: 337 QSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASH 396
Query: 393 GHLEKALQLVETMP----VEPNGAVW-GALLGASHV----HGNPDVAEIVSRHLFELEPN 443
GH +AL + + M P+G + G L SH+ G AE+ R L LEP
Sbjct: 397 GHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEM--RDLHGLEP- 453
Query: 444 NIGNYLLLSNTYASAGRWDDVSRVRKLM 471
+ +Y + + + AGR+++ R+ K M
Sbjct: 454 TVEHYGCMVDILSRAGRFEEAERLVKTM 481
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 245 bits (626), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 171/605 (28%), Positives = 289/605 (47%), Gaps = 56/605 (9%)
Query: 14 SILNTCTTLRR---AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
+IL+ C+ +R KQ+H+ + S+ + N L + + + +F
Sbjct: 330 AILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDV-GNALVDMYMKCSASEVEASR--VFGA 386
Query: 71 VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT---LG 127
+ SPN ++ LI G + L M + + P T S + A + L
Sbjct: 387 MVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRV 446
Query: 128 TQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARN 187
++HA+ L ++ V N+++ Y S +D A V M +R
Sbjct: 447 LEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRR--------------- 491
Query: 188 GDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAI 247
D + +T++VT + + + AL + G+ D+++L G I
Sbjct: 492 ----------------DNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFI 535
Query: 248 SACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERN 307
SA A LGA + + C + SGF A +VL ++LVDMYSKCG++E+A VF + +
Sbjct: 536 SASANLGALETGKHLHCYSVKSGFSGAASVL--NSLVDMYSKCGSLEDAKKVFEEIATPD 593
Query: 308 AFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFS 367
+++ ++ G A +G +A+ F EM E +P+ VTF+ +L AC++ L D G F
Sbjct: 594 VVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQ 653
Query: 368 NMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNP 427
M+ Y + P +HY + +LGRAG LE+A +VETM ++PN ++ LL A GN
Sbjct: 654 VMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNL 713
Query: 428 DVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVES 487
+ E ++ L P++ Y+LL++ Y +G+ + + R LM +K L K G S VE
Sbjct: 714 SLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEV 773
Query: 488 RNGVIHEFLAGDVKH-PEINEIKKALDDLLERLKAIGYLPNLSSVPYDIGDKEKRFLLMA 546
+ G +H F++ DV + N I ++ + E +K G PY G++ F
Sbjct: 774 Q-GKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFGS-------PYR-GNENASF---- 820
Query: 547 HSEKLALAFGLLNTDAGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFLN 606
HS K A+ +G + + + ++KN +C+DCH + +++ +KI VRD + H F N
Sbjct: 821 HSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKN 880
Query: 607 GACSC 611
G CSC
Sbjct: 881 GECSC 885
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 188/447 (42%), Gaps = 54/447 (12%)
Query: 8 LEWQVVSILNTCTTLRRAKQLHAH--IYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPR 65
L+ + IL+ C + LH H + + L ++ + NLL T R
Sbjct: 23 LQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWN----AR 78
Query: 66 LLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALF---SAVT 122
LF ++ F ++ +I A+T F AL L+ M P FTFS++ + +
Sbjct: 79 KLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLR 138
Query: 123 NLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELIT 182
+++ G ++H + GF + V +++ +Y K G
Sbjct: 139 DISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCG------------------------- 173
Query: 183 AYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
A ELF L D ++WT M++ +EAL+F+ + +AG+ +E T
Sbjct: 174 ------QFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFT 227
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGF-GPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
+ A + LG ++ + I + G NV++ ++LVD YS+ +E+A V
Sbjct: 228 FVKLLGASSFLGL----EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLN 283
Query: 302 GMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
E++ F ++S++ GF + RA+ A+ F EM ++PN+ T+ +L C+ +D
Sbjct: 284 SSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDF 343
Query: 362 GQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGAS 421
G+ + S G S D + D+ + E V V PN W L+
Sbjct: 344 GKQIHSQTIKV-GFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGL 402
Query: 422 HVHGNPD-----VAEIVSRHLFELEPN 443
HG + E+V R E+EPN
Sbjct: 403 VDHGFVQDCFGLLMEMVKR---EVEPN 426
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 114/242 (47%), Gaps = 17/242 (7%)
Query: 5 RRALEWQVVS---ILNTCTTLR---RAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHL 58
+R +E VV+ +L C+ LR R ++HA++ R ++ ++ N L +
Sbjct: 420 KREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHV-DGEMVVGN---SLVDAYASS 475
Query: 59 PIHSYPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALF 118
Y + + + Y++L+ + G AL + M I +
Sbjct: 476 RKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFI 535
Query: 119 SAVTNL---TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVV 175
SA NL G LH +++ GF+ V N+++ MY K G L+ A+KVF+E+ DVV
Sbjct: 536 SASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVV 595
Query: 176 SWTELITAYARNGDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCL 231
SW L++ A NG ++SA F+E+ +K D V + +++ + + LE+F+ +
Sbjct: 596 SWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVM 655
Query: 232 RE 233
++
Sbjct: 656 KK 657
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 147/464 (31%), Positives = 234/464 (50%), Gaps = 43/464 (9%)
Query: 28 LHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIRAYT 87
+H ++ L + Y+ +L+ + L + +F ++P N L+ L++ Y
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVE----MYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYL 186
Query: 88 LRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL---TLGTQLHAHALLLGF--ASD 142
E RL+ MR+ + + T L A N+ +G +H ++ F SD
Sbjct: 187 KYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSD 246
Query: 143 IFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDV 202
++ ++I MYVK LD+ARK+F+ T+ RN
Sbjct: 247 -YLQASIIDMYVKCRLLDNARKLFE--------------TSVDRN--------------- 276
Query: 203 KDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWV 262
V WT +++G+A+ EA + FR + + ++ TLA + +C+ LG+ + V
Sbjct: 277 --VVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSV 334
Query: 263 RCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHG 322
+G + + ++ +DMY++CGN++ A VF M ERN ++SSMI F I+G
Sbjct: 335 HGYMIRNGI--EMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGING 392
Query: 323 RARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHY 382
A+ F++M + PN VTFV +L AC+H+G V +G F +M YGVVP +HY
Sbjct: 393 LFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHY 452
Query: 383 ACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEP 442
ACM DLLGRAG + +A ++ MPV+P + WGALL A +H D+A ++ L +EP
Sbjct: 453 ACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEP 512
Query: 443 NNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVE 486
Y+LLSN YA AG W+ V+ VR+ M K +K+ G S E
Sbjct: 513 EKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATE 556
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 188/432 (43%), Gaps = 67/432 (15%)
Query: 12 VVSILNTCTTLRRAKQLHAHIYRHNLHQ---------SSYIITNLLRHLTTTFPHLPIHS 62
+++IL+ TL +Q+HA + H ++YI +N L T++F +P
Sbjct: 10 LLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIP--C 67
Query: 63 YPRLLFSQVPSPNPFLYSALIRAYTLRGP--FTEALRLYTSMRNQRITPISFTFSALFSA 120
+ R N ++ ++ Y+ +++ L LY MR SF A
Sbjct: 68 WKR---------NRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKA 118
Query: 121 VTNLTL---GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSW 177
L L G +H A+ G D +V ++++MY
Sbjct: 119 CVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMY------------------------ 154
Query: 178 TELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGME 237
A+ G M SA+++FDE+ V++ V W ++ GY + + E F +R+ G+
Sbjct: 155 -------AQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLA 207
Query: 238 TDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAY 297
D +TL + AC + A K V ++ F + L S ++DMY KC ++ A
Sbjct: 208 LDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQAS-IIDMYVKCRLLDNAR 266
Query: 298 NVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAG 357
+F +RN ++++I GFA RA A LF +ML I PN T +LV+C+ G
Sbjct: 267 KLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLG 326
Query: 358 LVDQGQ----YLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAV 413
+ G+ Y+ N G+ A ++ D+ R G+++ A + + MP E N
Sbjct: 327 SLRHGKSVHGYMIRN-----GIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP-ERNVIS 380
Query: 414 WGALLGASHVHG 425
W +++ A ++G
Sbjct: 381 WSSMINAFGING 392
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 148/494 (29%), Positives = 251/494 (50%), Gaps = 59/494 (11%)
Query: 7 ALEWQVVSILNTCTTL---RRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHL-PIHS 62
A E+ + S + C+ L R + H + H + +I ++T +L ++
Sbjct: 161 ANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFI--------SSTLAYLYGVNR 212
Query: 63 YP---RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSM-RNQRITPISFTFSALF 118
P R +F ++P P+ ++A++ A++ + EAL L+ +M R + + P TF +
Sbjct: 213 EPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVL 272
Query: 119 SAVTNL---TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVV 175
+A NL G ++H + G S++ V ++++ MY K
Sbjct: 273 TACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKC------------------- 313
Query: 176 SWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAG 235
G + AR++F+ + K+ V+W+A++ GY QN ++A+E FR + E
Sbjct: 314 ------------GSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEE-- 359
Query: 236 METDEVTLAGAISACAQLGASKDADWVRCIAESSG-FGPARNVLVGSALVDMYSKCGNVE 294
D + ACA L A + + G FG NV+V SAL+D+Y K G ++
Sbjct: 360 --KDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFG---NVIVESALIDLYGKSGCID 414
Query: 295 EAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACT 354
A V+ M RN T+++M+ A +GR A+ F +M++ IKP++++F+ +L AC
Sbjct: 415 SASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACG 474
Query: 355 HAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVW 414
H G+VD+G+ F M YG+ P +HY+CM DLLGRAG E+A L+E + ++W
Sbjct: 475 HTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLW 534
Query: 415 GALLGASHVHGNPD-VAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRD 473
G LLG + + VAE +++ + ELEP +Y+LLSN Y + GR D +RKLM
Sbjct: 535 GVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVR 594
Query: 474 KNLKKNPGYSWVES 487
+ + K G SW+++
Sbjct: 595 RGVAKTVGQSWIDA 608
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 168/391 (42%), Gaps = 47/391 (12%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTN 123
L + S P S ++ L G TEA+R+ S + I +++L V +
Sbjct: 18 LTPSISSSAPTKQSRILELCKL-GQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFS 76
Query: 124 LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
G Q HAH + G +D V N+++ +Y K G P
Sbjct: 77 FIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLG------------P------------- 111
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
M R +FD VKD ++WT+M++GY +ALE F + G++ +E TL
Sbjct: 112 -----GMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTL 166
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
+ A+ AC++LG + + + GF N + S L +Y +A VF M
Sbjct: 167 SSAVKACSELGEVRLGRCFHGVVITHGF--EWNHFISSTLAYLYGVNREPVDARRVFDEM 224
Query: 304 KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETE-IKPNHVTFVGVLVACTHAGLVDQG 362
E + +++++ F+ + A+ LFY M + + P+ TF VL AC + + QG
Sbjct: 225 PEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQG 284
Query: 363 Q----YLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALL 418
+ L +N G VV S+ + D+ G+ G + +A Q+ M + N W ALL
Sbjct: 285 KEIHGKLITNGIGSNVVVESS-----LLDMYGKCGSVREARQVFNGMS-KKNSVSWSALL 338
Query: 419 GASHVHGNPDVAEIVSRHLFELEPNNIGNYL 449
G +G + A + R + E + G L
Sbjct: 339 GGYCQNGEHEKAIEIFREMEEKDLYCFGTVL 369
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 147/512 (28%), Positives = 258/512 (50%), Gaps = 55/512 (10%)
Query: 14 SILNTC---TTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
S++ TC T L+ A+Q+H + ++S + N+L + + + + +F Q
Sbjct: 281 SVITTCCHETDLKLARQIHGLCIKRG-YESLLEVGNIL---MSRYSKCGVLEAVKSVFHQ 336
Query: 71 VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT---NLTLG 127
+ N ++ +I + +A+ ++ +MR + P TF L +AV + G
Sbjct: 337 MSERNVVSWTTMISSNK-----DDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEG 391
Query: 128 TQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARN 187
++H + GF S+ V N+ I +Y K L+ A+K
Sbjct: 392 LKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKA---------------------- 429
Query: 188 GDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET--DEVTLAG 245
F+++ ++ ++W AM++G+AQN EAL+ F A ET +E T
Sbjct: 430 ---------FEDITFREIISWNAMISGFAQNGFSHEALKMFL---SAAAETMPNEYTFGS 477
Query: 246 AISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE 305
++A A RC A G +V SAL+DMY+K GN++E+ VF M +
Sbjct: 478 VLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQ 537
Query: 306 RNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYL 365
+N F ++S+I ++ HG + LF++M++ + P+ VTF+ VL AC G+VD+G +
Sbjct: 538 KNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEI 597
Query: 366 FSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHG 425
F+ M Y + PS +HY+CM D+LGRAG L++A +L+ +P P ++ ++LG+ +HG
Sbjct: 598 FNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHG 657
Query: 426 NPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWV 485
N + V+ E++P G+Y+ + N YA WD + +RK MR KN+ K G+SW+
Sbjct: 658 NVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWI 717
Query: 486 ESRNG----VIHEFLAGDVKHPEINEIKKALD 513
+ + + F +GD HP+ +EI + ++
Sbjct: 718 DVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVE 749
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 169/421 (40%), Gaps = 79/421 (18%)
Query: 95 ALRLYTSMRNQRITPISFTFSALFS---AVTNLTLGTQLHAHALLLGFASDIFVNNTMIK 151
AL M++ + +FT+S S LG QL + + G SD+ V N+ I
Sbjct: 158 ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFIT 217
Query: 152 MYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAM 211
MY +SG AR+VFDEM +D++SW L++ ++ G
Sbjct: 218 MYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTF--------------------- 256
Query: 212 VTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGF 271
G+ EA+ FR + G+E D V+ I+ C K A + + G+
Sbjct: 257 --GF-------EAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGY 307
Query: 272 GPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLF 331
+ VG+ L+ YSKCG +E +VF M ERN ++++M I A+ +F
Sbjct: 308 ESL--LEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTM-----ISSNKDDAVSIF 360
Query: 332 YEMLETEIKPNHVTFVGVLVA----------------CTHAGLVDQGQY------LFSNM 369
M + PN VTFVG++ A C G V + L++
Sbjct: 361 LNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKF 420
Query: 370 EGCYGVVPSAD--------HYACMADLLGRAGHLEKALQLVETMPVE--PNGAVWGALLG 419
E + + + M + G +AL++ + E PN +G++L
Sbjct: 421 EALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLN 480
Query: 420 ASHVHGNPDV--AEIVSRHLFELEPNN---IGNYLLLSNTYASAGRWDDVSRVRKLMRDK 474
A + V + HL +L N+ + + LL + YA G D+ +V M K
Sbjct: 481 AIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALL--DMYAKRGNIDESEKVFNEMSQK 538
Query: 475 N 475
N
Sbjct: 539 N 539
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 152/335 (45%), Gaps = 34/335 (10%)
Query: 79 YSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT-----NLTLGTQLHAH 133
++A+I + G EAL+++ S + + P +TF ++ +A+ ++ G + HAH
Sbjct: 441 WNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAH 499
Query: 134 ALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSA 193
L LG S V++ ++ MY K G +D + KVF+EM Q++ WT +I+AY+ +GD +
Sbjct: 500 LLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETV 559
Query: 194 RELFDELDVKDKVA-----WTAMVTGYAQNAMPKEALEFFRCLREA-GMETDEVTLAGAI 247
LF ++ +K+ VA + +++T + M + E F + E +E + +
Sbjct: 560 MNLFHKM-IKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMV 618
Query: 248 SACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKC---GNVEEAYNVFR--- 301
+ G K+A+ ++E G GP S L M C GNV+ V
Sbjct: 619 DMLGRAGRLKEAE--ELMSEVPG-GPGE-----SMLQSMLGSCRLHGNVKMGAKVAELAM 670
Query: 302 GMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
MK + +Y M +A A ++ M + + F + V T L Q
Sbjct: 671 EMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNV-SKEAGFSWIDVGDTEGSLTMQ 729
Query: 362 GQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLE 396
G FS+ + + P +D M +++G +LE
Sbjct: 730 G---FSSGDKSH---PKSDEIYRMVEIIGLEMNLE 758
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 47/246 (19%)
Query: 116 ALFSAVTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVV 175
AL + +L G Q+H + GF S + V+N ++ MY K+G D+A +F+ + DVV
Sbjct: 84 ALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVV 143
Query: 176 SWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAG 235
SW +++ + N + AL F ++ AG
Sbjct: 144 SWNTILSGFDDN----------------------------------QIALNFVVRMKSAG 169
Query: 236 METDEVTLAGAISACAQ-----LGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKC 290
+ D T + A+S C LG + V+ ES +++VG++ + MYS+
Sbjct: 170 VVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLES-------DLVVGNSFITMYSRS 222
Query: 291 GNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGR-ARAAIKLFYEMLETEIKPNHVTFVGV 349
G+ A VF M ++ +++S++ G + G A+ +F +M+ ++ +HV+F V
Sbjct: 223 GSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSV 282
Query: 350 LVACTH 355
+ C H
Sbjct: 283 ITTCCH 288
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 152/491 (30%), Positives = 248/491 (50%), Gaps = 64/491 (13%)
Query: 21 TLRRAKQLHAHIYRHNLHQSSYIITNLLRHL--------TTTFPHLPIHSYPRLLFSQVP 72
TL +AKQ+HA + + H +S + L+ H ++ HL L+F +
Sbjct: 20 TLIQAKQIHAQLVINGCHDNS-LFGKLIGHYCSKPSTESSSKLAHL-------LVFPRFG 71
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMR--------NQRITPISFTFSALFSAVTNL 124
P+ FL++ L++ +++R++ + N+R A ++ + L
Sbjct: 72 HPDKFLFNTLLKCSKPE----DSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSAL 127
Query: 125 TLGTQLHAHALLLGFASDI-FVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
+G +H LGF + + T++ Y K+G L ARKVFDEMP+R V+W +I
Sbjct: 128 RVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGG 187
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLR--EAGMETDEV 241
Y + KDK N ++A+ FR +G+ +
Sbjct: 188 YCSH---------------KDK-----------GNHNARKAMVLFRRFSCCGSGVRPTDT 221
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
T+ +SA +Q G + V E GF P +V +G+ALVDMYSKCG + A++VF
Sbjct: 222 TMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFE 281
Query: 302 GMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
MK +N FT++SM G A++GR L M E+ IKPN +TF +L A H GLV++
Sbjct: 282 LMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEE 341
Query: 362 GQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGAS 421
G LF +M+ +GV P +HY C+ DLLG+AG +++A Q + MP++P+ + +L A
Sbjct: 342 GIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNAC 401
Query: 422 HVHGNPDVAEIVSRHLFELEPNN-------IGNYLLLSNTYASAGRWDDVSRVRKLMRDK 474
++G + E + + L E+E + +Y+ LSN A G+W +V ++RK M+++
Sbjct: 402 SIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKER 461
Query: 475 NLKKNPGYSWV 485
+K PGYS+V
Sbjct: 462 RIKTRPGYSFV 472
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 138/417 (33%), Positives = 232/417 (55%), Gaps = 42/417 (10%)
Query: 111 SFTFSALFSAVTNLTL------GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARK 164
SF L SAV + L G+ H AL GF SD+++ ++++ +Y
Sbjct: 117 SFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLY----------- 165
Query: 165 VFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEA 224
RD +G++ +A ++F+E+ ++ V+WTAM++G+AQ
Sbjct: 166 -------RD-------------SGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDIC 205
Query: 225 LEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALV 284
L+ + +R++ + ++ T +SAC GA V C ++ G + + ++L+
Sbjct: 206 LKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHC--QTLHMGLKSYLHISNSLI 263
Query: 285 DMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEML-ETEIKPNH 343
MY KCG++++A+ +F ++ +++SMI G+A HG A AI+LF M+ ++ KP+
Sbjct: 264 SMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDA 323
Query: 344 VTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVE 403
+T++GVL +C HAGLV +G+ F N+ +G+ P +HY+C+ DLLGR G L++AL+L+E
Sbjct: 324 ITYLGVLSSCRHAGLVKEGRKFF-NLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIE 382
Query: 404 TMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDD 463
MP++PN +WG+LL + VHG+ + LEP+ ++ L+N YAS G W +
Sbjct: 383 NMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKE 442
Query: 464 VSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLK 520
+ VRKLM+DK LK NPG SW+E N V F A D + + EI L L++ ++
Sbjct: 443 AATVRKLMKDKGLKTNPGCSWIEINNYVFM-FKAEDGSNCRMLEIVHVLHCLIDHME 498
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 129/292 (44%), Gaps = 38/292 (13%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN--- 123
+F ++P N ++A+I + L+LY+ MR P +TF+AL SA T
Sbjct: 177 VFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGA 236
Query: 124 LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
L G +H L +G S + ++N++I MY K G L A ++FD+ +DVVSW +I
Sbjct: 237 LGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAG 296
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
YA++G A ELF+ + MPK +G + D +T
Sbjct: 297 YAQHGLAMQAIELFELM-------------------MPK-----------SGTKPDAITY 326
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
G +S+C G K+ + G P N S LVD+ + G ++EA + M
Sbjct: 327 LGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHY--SCLVDLLGRFGLLQEALELIENM 384
Query: 304 KER-NAFTYSSMIVGFAIHGRARAAIKLFYE--MLETEIKPNHVTFVGVLVA 352
+ N+ + S++ +HG I+ E MLE + HV + +
Sbjct: 385 PMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYAS 436
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 148/462 (32%), Positives = 233/462 (50%), Gaps = 9/462 (1%)
Query: 67 LFSQVPSPNPFL-YSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALF---SAVT 122
+F + P N + ++ LI Y G EAL++ SM + +F A+ S++
Sbjct: 215 VFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLK 274
Query: 123 NLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELIT 182
+L +G ++HA L G S+ FV++ ++ +Y K G + A ++ S + +I
Sbjct: 275 SLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIV 334
Query: 183 AYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET-DEV 241
Y+ G M A+ LFD L K+ V WTAM GY P LE R T D +
Sbjct: 335 GYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSL 394
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
+ + AC+ + + + +G + ++ +A VDMYSKCGNVE A +F
Sbjct: 395 VMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLV--TAFVDMYSKCGNVEYAERIFD 452
Query: 302 GMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
ER+ Y++MI G A HG + + F +M E KP+ +TF+ +L AC H GLV +
Sbjct: 453 SSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLE 512
Query: 362 GQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM-PVEPNGAVWGALLGA 420
G+ F +M Y + P HY CM DL G+A L+KA++L+E + VE + + GA L A
Sbjct: 513 GEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNA 572
Query: 421 SHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNP 480
+ N ++ + V L +E +N Y+ ++N YAS+GRWD++ R+R MR K L+
Sbjct: 573 CSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFS 632
Query: 481 GYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAI 522
G SW + + H F + D+ H E I L + + L I
Sbjct: 633 GCSWA-NIDKQFHMFTSSDISHYETEAIYAMLHFVTKDLSEI 673
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/460 (22%), Positives = 196/460 (42%), Gaps = 55/460 (11%)
Query: 11 QVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
Q+V++ + LR A+ + + N++ + +I ++ F ++ R LF
Sbjct: 28 QLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVK-----FNNVK---EARELFES 79
Query: 71 VPSPNPFL-YSALIRAYT-LRGPFTEALRLYTSMRNQRITPI---SFTFSA---LFSAVT 122
+ Y+ L+ + G +EA+ ++ M + I FT + L + +T
Sbjct: 80 DNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLT 139
Query: 123 NLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDE--MPQRDVVSWTEL 180
N+ G QLH + G F +++I MY K G +F+ + D V+ +
Sbjct: 140 NVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAM 199
Query: 181 ITAYARNGDMNSARELF-DELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETD 239
I AY R GD++ A +F ++ D ++W ++ GYAQN +EAL+ + E G++ D
Sbjct: 200 IAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWD 259
Query: 240 EVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNV 299
E + ++ + L + K V A G N V S +VD+Y KCGN++ A +
Sbjct: 260 EHSFGAVLNVLSSLKSLKIGKEVH--ARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESA 317
Query: 300 FRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEI-------------------- 339
N ++ SSMIVG++ G+ A +LF + E +
Sbjct: 318 HLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVL 377
Query: 340 ------------KPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMAD 387
P+ + V VL AC+ ++ G+ + + G++ D
Sbjct: 378 ELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRT-GILMDKKLVTAFVD 436
Query: 388 LLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNP 427
+ + G++E A ++ ++ E + ++ A++ HG+
Sbjct: 437 MYSKCGNVEYAERIFDS-SFERDTVMYNAMIAGCAHHGHE 475
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 146 NNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDV-KD 204
+N ++ +Y KSG L AR VFDEM +R+V SW +I AY + ++ ARELF+ + +D
Sbjct: 26 SNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERD 85
Query: 205 KVAWTAMVTGYAQ-NAMPKEALEFFRCLREAGME---TDEVTLAGAISACAQLGASKDAD 260
+ + +++G+A+ + EA+E F + + D+ T+ + A+L +
Sbjct: 86 LITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGE 145
Query: 261 WVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG--MKERNAFTYSSMIVGF 318
+ + +G + + S+L+ MYSKCG +E N+F G ++ ++ ++MI +
Sbjct: 146 QLHGVLVKTGNDGTKFAV--SSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAY 203
Query: 319 AIHGRARAAIKLFY 332
G A+ +F+
Sbjct: 204 CREGDIDKALSVFW 217
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 142/429 (33%), Positives = 220/429 (51%), Gaps = 28/429 (6%)
Query: 77 FLYSALIRAYTLRGPFTEALRLYTSMRN-----------QRITPISFTFSALFSAVTNLT 125
+ Y+ LI Y RG A L+ + + +R +++++ A L
Sbjct: 236 YAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAY--LK 293
Query: 126 LGTQLHAHALLLGFAS-DIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAY 184
+G + A L D NTMI YV ++ A +F EMP RD SW +++ Y
Sbjct: 294 VGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGY 353
Query: 185 ARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLA 244
A G++ AR F++ K V+W +++ Y +N KEA++ F + G + D TL
Sbjct: 354 ASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLT 413
Query: 245 GAISACA-----QLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNV 299
+SA +LG V+ + +V V +AL+ MYS+CG + E+ +
Sbjct: 414 SLLSASTGLVNLRLGMQMHQIVVKTVIP--------DVPVHNALITMYSRCGEIMESRRI 465
Query: 300 FRGMK-ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGL 358
F MK +R T+++MI G+A HG A A+ LF M I P+H+TFV VL AC HAGL
Sbjct: 466 FDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGL 525
Query: 359 VDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALL 418
VD+ + F +M Y + P +HY+ + ++ G E+A+ ++ +MP EP+ VWGALL
Sbjct: 526 VDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALL 585
Query: 419 GASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKK 478
A ++ N +A + + + LEP + Y+LL N YA G WD+ S+VR M K +KK
Sbjct: 586 DACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKK 645
Query: 479 NPGYSWVES 487
G SWV+S
Sbjct: 646 ERGSSWVDS 654
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 159/381 (41%), Gaps = 59/381 (15%)
Query: 66 LLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT 125
LLF ++P N +SA+I + G A+ L+ M + +P+ + L
Sbjct: 157 LLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSE 216
Query: 126 LGTQLHAHALLLGFASD-IFVNNTMIKMYVKSGCLDSARKVFDEMPQ------------- 171
L + L+ D ++ NT+I Y + G +++AR +FD++P
Sbjct: 217 AAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRER 276
Query: 172 --RDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFR 229
++VVSW +I AY + GD+ SAR LFD++ +D ++W M+ GY + ++A F
Sbjct: 277 FCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFS 336
Query: 230 CLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSK 289
+ P R+ + +V Y+
Sbjct: 337 EM-----------------------------------------PNRDAHSWNMMVSGYAS 355
Query: 290 CGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGV 349
GNVE A + F E++ +++S+I + + + A+ LF M KP+ T +
Sbjct: 356 VGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSL 415
Query: 350 LVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEP 409
L A T GLV+ + + V+P + + + R G + ++ ++ + M ++
Sbjct: 416 LSAST--GLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKR 473
Query: 410 NGAVWGALLGASHVHGNPDVA 430
W A++G HGN A
Sbjct: 474 EVITWNAMIGGYAFHGNASEA 494
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 111/239 (46%), Gaps = 47/239 (19%)
Query: 142 DIFVNNTMIKMYVKSG---CLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFD 198
D+ NTMI YV G L+ ARK+FDEMP RD SW +I+ YA+N + A LF+
Sbjct: 101 DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFE 160
Query: 199 ELDVKDKVAWTAMVTGYAQNAMPKEALEFFR----------CLREAGMETDEVTLAGAIS 248
++ ++ V+W+AM+TG+ QN A+ FR C AG+ +E L+ A
Sbjct: 161 KMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNE-RLSEAAW 219
Query: 249 ACAQLGA--SKDADWV-------------------RCIAES------SGFGP------AR 275
Q G+ S D V RC+ + G +
Sbjct: 220 VLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCK 279
Query: 276 NVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEM 334
NV+ ++++ Y K G+V A +F MK+R+ ++++MI G+ R A LF EM
Sbjct: 280 NVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM 338
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 42/205 (20%)
Query: 137 LGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSAREL 196
LGF + N + ++SG + AR +F+++ R+ V+W +I+ Y + +MN AR+L
Sbjct: 38 LGFRA----TNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKL 93
Query: 197 FDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGAS 256
FD + +D V W M++GY + R L EA DE+
Sbjct: 94 FDVMPKRDVVTWNTMISGYV-------SCGGIRFLEEARKLFDEM--------------- 131
Query: 257 KDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIV 316
P+R+ + ++ Y+K + EA +F M ERNA ++S+MI
Sbjct: 132 ----------------PSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMIT 175
Query: 317 GFAIHGRARAAIKLFYEMLETEIKP 341
GF +G +A+ LF +M + P
Sbjct: 176 GFCQNGEVDSAVVLFRKMPVKDSSP 200
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 37/243 (15%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT-- 122
R F + P + ++++I AY + EA+ L+ M + P T ++L SA T
Sbjct: 363 RHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGL 422
Query: 123 -NLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMP-QRDVVSWTEL 180
NL LG Q+H ++ D+ V+N +I MY + G + +R++FDEM +R+V++W +
Sbjct: 423 VNLRLGMQMH-QIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAM 481
Query: 181 ITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
I YA +G+ EAL F ++ G+
Sbjct: 482 IGGYAFHGN-------------------------------ASEALNLFGSMKSNGIYPSH 510
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
+T ++ACA G +A + ++ S + + S+LV++ S G EEA +
Sbjct: 511 ITFVSVLNACAHAGLVDEAK-AQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYII 569
Query: 301 RGM 303
M
Sbjct: 570 TSM 572
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 143/495 (28%), Positives = 236/495 (47%), Gaps = 40/495 (8%)
Query: 13 VSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVP 72
+S+ T L + LH I + ++ T L+ T + + +P
Sbjct: 252 LSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALI----TMYLKCGKEEASYRVLETIP 307
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL---TLGTQ 129
+ + ++ +I G +AL +++ M S +++ ++ L LG
Sbjct: 308 NKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGAS 367
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGD 189
+H + L G+ D N++I MY K G LD + +F+ M +RD+VSW +I+ YA+N D
Sbjct: 368 VHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVD 427
Query: 190 MNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISA 249
+ A LF+E+ K + D T+ + A
Sbjct: 428 LCKALLLFEEMKFK------------------------------TVQQVDSFTVVSLLQA 457
Query: 250 CAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAF 309
C+ GA + CI S P LV +ALVDMYSKCG +E A F + ++
Sbjct: 458 CSSAGALPVGKLIHCIVIRSFIRPCS--LVDTALVDMYSKCGYLEAAQRCFDSISWKDVV 515
Query: 310 TYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNM 369
++ +I G+ HG+ A++++ E L + ++PNHV F+ VL +C+H G+V QG +FS+M
Sbjct: 516 SWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSM 575
Query: 370 EGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDV 429
+GV P+ +H AC+ DLL RA +E A + + P+ V G +L A +G +V
Sbjct: 576 VRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEV 635
Query: 430 AEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRN 489
+I+ + EL+P + G+Y+ L +++A+ RWDDVS MR LKK PG+S +E N
Sbjct: 636 EDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIE-MN 694
Query: 490 GVIHEFLAGDVKHPE 504
G F H +
Sbjct: 695 GKTTTFFMNHTSHSD 709
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 176/408 (43%), Gaps = 42/408 (10%)
Query: 14 SILNTCTTLRRAK---QLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
S+L C +L+R +H + + YI ++L+ + + ++ R +F +
Sbjct: 51 SLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLV----NLYAKFGLLAHARKVFEE 106
Query: 71 VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQL 130
+ + ++A+I Y+ G EA L MR Q I P T + S V +T L
Sbjct: 107 MRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCL 166
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDM 190
H A++ GF DI V N+M+ +Y K GD
Sbjct: 167 HDFAVIYGFDCDIAVMNSMLNLYCKCD----------------------------HVGD- 197
Query: 191 NSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISAC 250
A++LFD+++ +D V+W M++GYA E L+ +R G+ D+ T ++S
Sbjct: 198 --AKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVS 255
Query: 251 AQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFT 310
+ + + C +GF ++ + +AL+ MY KCG E +Y V + ++
Sbjct: 256 GTMCDLEMGRMLHCQIVKTGFDV--DMHLKTALITMYLKCGKEEASYRVLETIPNKDVVC 313
Query: 311 YSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNME 370
++ MI G GRA A+ +F EML++ + V+ +C G D G + +
Sbjct: 314 WTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVL 373
Query: 371 GCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALL 418
+G + + + GHL+K+L + E M E + W A++
Sbjct: 374 R-HGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAII 419
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 166/365 (45%), Gaps = 43/365 (11%)
Query: 79 YSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL---TLGTQLHAHAL 135
+++ I + G + L ++SM ++ P +FTF +L A +L + G +H L
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 136 LLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARE 195
+ GF+SD +++++++ +Y K G L AR+
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLL-------------------------------AHARK 102
Query: 196 LFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGA 255
+F+E+ +D V WTAM+ Y++ + EA +R G++ VTL +S ++
Sbjct: 103 VFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQ 162
Query: 256 SKDADWVRCIAE-SSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSM 314
++C+ + + +G ++ V ++++++Y KC +V +A ++F M++R+ ++++M
Sbjct: 163 ------LQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTM 216
Query: 315 IVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYG 374
I G+A G +KL Y M ++P+ TF L ++ G+ L + G
Sbjct: 217 ISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKT-G 275
Query: 375 VVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVS 434
+ + + G E + +++ET+P + W ++ G + A IV
Sbjct: 276 FDVDMHLKTALITMYLKCGKEEASYRVLETIP-NKDVVCWTVMISGLMRLGRAEKALIVF 334
Query: 435 RHLFE 439
+ +
Sbjct: 335 SEMLQ 339
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 147/521 (28%), Positives = 260/521 (49%), Gaps = 60/521 (11%)
Query: 14 SILNTCTTL---RRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
++++ C+ L K +HA +++ + +S I + LL T + L+F
Sbjct: 378 NVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALL----TLYSKCGCDPDAYLVFKS 433
Query: 71 VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQ--RITPISFTFSALFSAVTNLT--- 125
+ + + +LI G F EAL+++ M++ + P S +++ +A L
Sbjct: 434 MEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALR 493
Query: 126 LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYA 185
G Q+H + G ++FV +++I +Y K G + A KV
Sbjct: 494 FGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKV-------------------- 533
Query: 186 RNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
F + ++ VAW +M++ Y++N +P+ +++ F + G+ D V++
Sbjct: 534 -----------FTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITS 582
Query: 246 ---AISACAQL--GASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
AIS+ A L G S +R G + + +AL+DMY KCG + A N+F
Sbjct: 583 VLVAISSTASLLKGKSLHGYTLR-------LGIPSDTHLKNALIDMYVKCGFSKYAENIF 635
Query: 301 RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVD 360
+ M+ ++ T++ MI G+ HG A+ LF EM + P+ VTF+ ++ AC H+G V+
Sbjct: 636 KKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVE 695
Query: 361 QGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGA 420
+G+ +F M+ YG+ P+ +HYA M DLLGRAG LE+A ++ MP+E + ++W LL A
Sbjct: 696 EGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSA 755
Query: 421 SHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNP 480
S H N ++ + + L +EP Y+ L N Y AG ++ +++ LM++K L K P
Sbjct: 756 SRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQP 815
Query: 481 GYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKA 521
G SW+E + + F +G P +K + ++L RLK+
Sbjct: 816 GCSWIEVSDRT-NVFFSGGSSSP----MKAEIFNVLNRLKS 851
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 151/344 (43%), Gaps = 38/344 (11%)
Query: 25 AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIR 84
+Q+H + + LH Y+ T+LL + + + +FS V +++A++
Sbjct: 291 GRQIHCDVVKMGLHNDPYVCTSLL----SMYSKCGMVGEAETVFSCVVDKRLEIWNAMVA 346
Query: 85 AYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL---GTQLHAHALLLGFAS 141
AY AL L+ MR + + P SFT S + S + L L G +HA S
Sbjct: 347 AYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQS 406
Query: 142 DIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELD 201
+ + ++ +Y K GC A VF M ++D+V+W LI+ +NG A ++F D
Sbjct: 407 TSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFG--D 464
Query: 202 VKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADW 261
+KD + ++ D + +ACA L A +
Sbjct: 465 MKDD---------------------------DDSLKPDSDIMTSVTNACAGLEALRFGLQ 497
Query: 262 VRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIH 321
V +G NV VGS+L+D+YSKCG E A VF M N ++SMI ++ +
Sbjct: 498 VHGSMIKTGL--VLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRN 555
Query: 322 GRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYL 365
+I LF ML I P+ V+ VLVA + + +G+ L
Sbjct: 556 NLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSL 599
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 165/355 (46%), Gaps = 55/355 (15%)
Query: 83 IRAYTLRGPFTEALRLYTSMRNQRITPI---SFTFSALF---SAVTNLTLGTQLHAHALL 136
IRA +G + +AL LY+ ++ +P FTF +L SA+TNL+ G +H ++
Sbjct: 31 IRALIQKGEYLQALHLYS--KHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVV 88
Query: 137 LGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSAREL 196
LG+ D F+ +++ MYVK G LD A +VFD W++ +++G
Sbjct: 89 LGWRYDPFIATSLVNMYVKCGFLDYAVQVFD--------GWSQ-----SQSG-------- 127
Query: 197 FDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGAS 256
+ +D W +M+ GY + KE + FR + G+ D +L+ +S + G
Sbjct: 128 ---VSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNF 184
Query: 257 KDADWVRCIAESSGFGPARNVL-----VGSALVDMYSKCGNVEEAYNVFRGMKER-NAFT 310
+ + + GF RN L + +AL+DMY K G +A+ VF ++++ N
Sbjct: 185 RREEG----KQIHGF-MLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVL 239
Query: 311 YSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNME 370
++ MIVGF G +++ L+ +K +F G L AC+ + G+ + +
Sbjct: 240 WNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCD-- 297
Query: 371 GCYGVVPSA---DHYAC--MADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGA 420
VV D Y C + + + G + +A + V + V+ +W A++ A
Sbjct: 298 ----VVKMGLHNDPYVCTSLLSMYSKCGMVGEA-ETVFSCVVDKRLEIWNAMVAA 347
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/420 (21%), Positives = 168/420 (40%), Gaps = 53/420 (12%)
Query: 14 SILNTC---TTLRRAKQLHAHIYRHNLHQSSYIITNLLR-HLTTTFPHLPIHSYPRLLFS 69
S+L C T L K +H + +I T+L+ ++ F + + S
Sbjct: 65 SLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQS 124
Query: 70 Q--VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN---- 123
Q V + + +++++I Y F E + + M + P +F+ S + S +
Sbjct: 125 QSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNF 184
Query: 124 -LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELIT 182
G Q+H L +D F+ +I MY K G A +VF E+ + V
Sbjct: 185 RREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNV------- 237
Query: 183 AYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
V W M+ G+ + + + +L+ + + ++ +
Sbjct: 238 -----------------------VLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTS 274
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
GA+ AC+Q S + C + G + V ++L+ MYSKCG V EA VF
Sbjct: 275 FTGALGACSQSENSGFGRQIHC--DVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSC 332
Query: 303 MKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQG 362
+ ++ +++M+ +A + +A+ LF M + + P+ T V+ C+ GL + G
Sbjct: 333 VVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYG 392
Query: 363 QY----LFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALL 418
+ LF + SA + L + G A + ++M E + WG+L+
Sbjct: 393 KSVHAELFKRPIQSTSTIESA-----LLTLYSKCGCDPDAYLVFKSME-EKDMVAWGSLI 446
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 149/473 (31%), Positives = 246/473 (52%), Gaps = 52/473 (10%)
Query: 14 SILNTCTTLR---RAKQLHAHIYRHNLHQSSYIITNLLR-HLTTTFPHLPIHSYPRLLFS 69
S+L TC +LR ++H I + L + I + L+R + + + + + R+ S
Sbjct: 97 SLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRM--S 154
Query: 70 QVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTNLTL 126
+ S +PF +++LI Y G + +A+ LY M + P FTF + A + ++ +
Sbjct: 155 KRDS-SPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQI 213
Query: 127 GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYAR 186
G +H + GF D++V N ++ MY K
Sbjct: 214 GEAIHRDLVKEGFGYDVYVLNALVVMYAKC------------------------------ 243
Query: 187 NGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGA 246
GD+ AR +FD + KD V+W +M+TGY + + EAL+ FR + + G+E D+V ++
Sbjct: 244 -GDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSV 302
Query: 247 ISACAQLGASKDA-DWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE 305
++ + WV G + V +AL+ +YSK G + +A +F M E
Sbjct: 303 LARVLSFKHGRQLHGWV------IRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLE 356
Query: 306 RNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYL 365
R+ +++++I + H + +K F +M KP+ +TFV VL C + G+V+ G+ L
Sbjct: 357 RDTVSWNAII---SAHSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERL 413
Query: 366 FSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQL-VETMPVEPNGAVWGALLGASHVH 424
FS M YG+ P +HYACM +L GRAG +E+A + V+ M +E VWGALL A ++H
Sbjct: 414 FSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLH 473
Query: 425 GNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLK 477
GN D+ E+ ++ LFELEP+N N+ LL Y+ A R +DV RVR++M D+ L+
Sbjct: 474 GNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 143/457 (31%), Positives = 216/457 (47%), Gaps = 42/457 (9%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFT-----EALRLYTSMRNQRITPISFTFSALF--- 118
LFS +PS N Y+A+I + T EA +L+ M+ + + P TFS +
Sbjct: 309 LFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKAC 368
Query: 119 SAVTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWT 178
SA L G Q+HA F SD F+ + +I++Y G + + F ++D+
Sbjct: 369 SAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIA--- 425
Query: 179 ELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET 238
+WT+M+ + QN + A + FR L + +
Sbjct: 426 ----------------------------SWTSMIDCHVQNEQLESAFDLFRQLFSSHIRP 457
Query: 239 DEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYN 298
+E T++ +SACA A + ++ A SG +V S + MY+K GN+ A
Sbjct: 458 EEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSS--ISMYAKSGNMPLANQ 515
Query: 299 VFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGL 358
VF ++ + TYS+MI A HG A A+ +F M IKPN F+GVL+AC H GL
Sbjct: 516 VFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGL 575
Query: 359 VDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALL 418
V QG F M+ Y + P+ H+ C+ DLLGR G L A L+ + + + W ALL
Sbjct: 576 VTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALL 635
Query: 419 GASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKK 478
+ V+ + + + V+ L ELEP G+Y+LL N Y +G VR+LMRD+ +KK
Sbjct: 636 SSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKK 695
Query: 479 NPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDL 515
P SW+ N H F D+ HP I L+ +
Sbjct: 696 EPALSWIVIGNQT-HSFAVADLSHPSSQMIYTMLETM 731
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 141/314 (44%), Gaps = 44/314 (14%)
Query: 63 YPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV- 121
+ R LF ++P N +++LI YT G + +A+ L+ R + FT++
Sbjct: 100 FARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCG 159
Query: 122 --TNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTE 179
+L LG LH ++ G + +F+ N +I MY K G LD A +FD +RD VSW
Sbjct: 160 ERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNS 219
Query: 180 LITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETD 239
LI+ Y R G +E L + G+
Sbjct: 220 LISGYVRVG-------------------------------AAEEPLNLLAKMHRDGLNLT 248
Query: 240 EVTLAGAISACA---QLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEA 296
L + AC G + + C ++ G +++V +AL+DMY+K G+++EA
Sbjct: 249 TYALGSVLKACCINLNEGFIEKGMAIHCY--TAKLGMEFDIVVRTALLDMYAKNGSLKEA 306
Query: 297 YNVFRGMKERNAFTYSSMIVGF----AIHGRARA-AIKLFYEMLETEIKPNHVTFVGVLV 351
+F M +N TY++MI GF I A + A KLF +M ++P+ TF VL
Sbjct: 307 IKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLK 366
Query: 352 ACTHAGLVDQGQYL 365
AC+ A ++ G+ +
Sbjct: 367 ACSAAKTLEYGRQI 380
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 121/242 (50%), Gaps = 15/242 (6%)
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
Y + ++ AR+LFD + ++ +++ ++++GY Q ++A+E F REA ++ D+ T
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
AGA+ C + + + + +G ++ V + + L+DMYSKCG +++A ++F
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGL--SQQVFLINVLIDMYSKCGKLDQAMSLFDRC 209
Query: 304 KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACT---HAGLVD 360
ER+ +++S+I G+ G A + L +M + VL AC + G ++
Sbjct: 210 DERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIE 269
Query: 361 QGQYLFSNMEGCY----GVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGA 416
+G + CY G+ + D+ + G L++A++L MP N + A
Sbjct: 270 KGMAIH-----CYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNA 323
Query: 417 LL 418
++
Sbjct: 324 MI 325
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Query: 286 MYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVT 345
MY KC + A +F M ERN +++S+I G+ G A++LF E E +K + T
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 346 FVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM 405
+ G L C +D G+ L + G+ + D+ + G L++A+ L +
Sbjct: 151 YAGALGFCGERCDLDLGE-LLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRC 209
Query: 406 PVEPNGAVWGALL 418
E + W +L+
Sbjct: 210 D-ERDQVSWNSLI 221
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 142/496 (28%), Positives = 239/496 (48%), Gaps = 44/496 (8%)
Query: 22 LRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSA 81
L R K++H + Y+ + L+ + R +F ++P + +++
Sbjct: 224 LERGKEIHRKCVKKGFELDEYVNSALV----DMYGKCDCLEVAREVFQKMPRKSLVAWNS 279
Query: 82 LIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT---NLTLGTQLHAHALLLG 138
+I+ Y +G + + M + P T +++ A + NL G +H + +
Sbjct: 280 MIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSV 339
Query: 139 FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFD 198
+DI+VN ++I +Y K G + A VF + Q+DV
Sbjct: 340 VNADIYVNCSLIDLYFKCGEANLAETVFSK-TQKDVAE---------------------- 376
Query: 199 ELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKD 258
+W M++ Y +A+E + + G++ D VT + AC+QL A +
Sbjct: 377 --------SWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEK 428
Query: 259 ADWVR-CIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVG 317
+ I+ES + L+ SAL+DMYSKCGN +EA+ +F + +++ +++ MI
Sbjct: 429 GKQIHLSISESR---LETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISA 485
Query: 318 FAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVP 377
+ HG+ R A+ F EM + +KP+ VT + VL AC HAGL+D+G FS M YG+ P
Sbjct: 486 YGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEP 545
Query: 378 SADHYACMADLLGRAGHLEKALQLVETMP-VEPNGAVWGALLGASHVHGNPDVAEIVSRH 436
+HY+CM D+LGRAG L +A ++++ P N + L A +H + + ++R
Sbjct: 546 IIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARL 605
Query: 437 LFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFL 496
L E P++ Y++L N YAS WD RVR M++ L+K PG SW+E + V H F
Sbjct: 606 LVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCH-FF 664
Query: 497 AGDVKHPEINEIKKAL 512
A D H + + L
Sbjct: 665 AEDRSHLRAENVYECL 680
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 169/366 (46%), Gaps = 50/366 (13%)
Query: 11 QVVSILNTCT----TLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRL 66
+++S+L CT +LRR K +H I L + L + L + H R
Sbjct: 5 KLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRD----VVLCKSLINVYFTCKDHCSARH 60
Query: 67 LFSQVP-SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRI-TPISFTFSALFSAVTNL 124
+F + +++++L+ Y+ F + L ++ + N I P SFTF + A L
Sbjct: 61 VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGAL 120
Query: 125 T---LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
LG +H + G+ D+ V ++++ MY
Sbjct: 121 GREFLGRMIHTLVVKSGYVCDVVVASSLVGMY---------------------------- 152
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
A+ ++ ++FDE+ +D +W +++ + Q+ ++ALE F + +G E + V
Sbjct: 153 ---AKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSV 209
Query: 242 TLAGAISACAQLGASKDADWV--RCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNV 299
+L AISAC++L + + +C+ + G + V SALVDMY KC +E A V
Sbjct: 210 SLTVAISACSRLLWLERGKEIHRKCVKK----GFELDEYVNSALVDMYGKCDCLEVAREV 265
Query: 300 FRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLV 359
F+ M ++ ++SMI G+ G +++ +++ M+ +P+ T +L+AC+ + +
Sbjct: 266 FQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNL 325
Query: 360 DQGQYL 365
G+++
Sbjct: 326 LHGKFI 331
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 136/425 (32%), Positives = 226/425 (53%), Gaps = 13/425 (3%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL 124
R +F ++P N ++A+I Y G A L+ + R T + +
Sbjct: 101 RKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEI 160
Query: 125 TLGTQLHAHALLLGFA-SDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
+L + F ++ + M+ +YV + ++ ARK F+++P+++ W+ +++
Sbjct: 161 EKARELFER---MPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSG 217
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
Y R GD++ AR +F + +D V W ++ GYAQN +A++ F ++ G E D VT+
Sbjct: 218 YFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTV 277
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
+ +SACAQ G V + G N V +AL+DMY+KCG++E A +VF +
Sbjct: 278 SSILSACAQSGRLDVGREVHSLINHRGI--ELNQFVSNALIDMYAKCGDLENATSVFESI 335
Query: 304 KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQ 363
R+ +SMI AIHG+ + A+++F M ++KP+ +TF+ VL AC H G + +G
Sbjct: 336 SVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGL 395
Query: 364 YLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHV 423
+FS M+ V P+ H+ C+ LLGR+G L++A +LV+ M V+PN V GALLGA V
Sbjct: 396 KIFSEMK-TQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKV 454
Query: 424 HGNPDVAEIVSRHLFELEPNNIGNY-----LLLSNTYASAGRWDDVSRVRKLMRDKNLKK 478
H + ++AE V + + E + +Y +SN YA RW +R M + L+K
Sbjct: 455 HMDTEMAEQVMK-IIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEK 513
Query: 479 NPGYS 483
+PG S
Sbjct: 514 SPGLS 518
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 200/416 (48%), Gaps = 23/416 (5%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRIT-P--ISFTFSALFSAVTNLTLGTQ 129
S F S LI+ + RG +AL LY +R + + P + A V + LG
Sbjct: 8 SLGEFHVSNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKL 67
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGD 189
LH+ ++ G SD+ V +++I MY K GC+ SARKVFDEMP+R+V +W +I Y NGD
Sbjct: 68 LHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGD 127
Query: 190 MNSARELFDELDV-KDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAIS 248
A LF+E+ V ++ V W M+ GY + ++A E F E L +
Sbjct: 128 AVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELF--------ERMPFELKNVKA 179
Query: 249 ACAQLGASKDADWVRCIAESSGFG---PARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE 305
LG + R + ++ F P +N V S ++ Y + G+V EA +F +
Sbjct: 180 WSVMLGVYVNN---RKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFA 236
Query: 306 RNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYL 365
R+ ++++I G+A +G + AI F+ M +P+ VT +L AC +G +D G+ +
Sbjct: 237 RDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREV 296
Query: 366 FSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHG 425
S + G+ + + D+ + G LE A + E++ V + A +++ +HG
Sbjct: 297 HSLINH-RGIELNQFVSNALIDMYAKCGDLENATSVFESISVR-SVACCNSMISCLAIHG 354
Query: 426 N-PDVAEIVSR-HLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKN 479
+ E+ S +L+P+ I ++ + G + ++ M+ +++K N
Sbjct: 355 KGKEALEMFSTMESLDLKPDEI-TFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPN 409
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 134/483 (27%), Positives = 236/483 (48%), Gaps = 40/483 (8%)
Query: 6 RALEWQVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPR 65
R E+ V S+L+ L KQ+H + + L + ++L T +
Sbjct: 450 RTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLF----TLYSKCGSLEESY 505
Query: 66 LLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN-- 123
LF +P + ++++I + G EA+ L++ M + +P T +A+ + ++
Sbjct: 506 KLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHP 565
Query: 124 -LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELIT 182
L G ++H + L G + + + ++ MY K G L
Sbjct: 566 SLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSL----------------------- 602
Query: 183 AYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
AR+++D L D V+ +++++GY+Q+ + ++ FR + +G D
Sbjct: 603 --------KLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFA 654
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
++ + A A S V A + G VGS+L+ MYSK G++++ F
Sbjct: 655 ISSILKAAALSDESSLGAQVH--AYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQ 712
Query: 303 MKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQG 362
+ + ++++I +A HG+A A++++ M E KP+ VTFVGVL AC+H GLV++
Sbjct: 713 INGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEES 772
Query: 363 QYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASH 422
+ ++M YG+ P HY CM D LGR+G L +A + M ++P+ VWG LL A
Sbjct: 773 YFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACK 832
Query: 423 VHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGY 482
+HG ++ ++ ++ ELEP++ G Y+ LSN A G WD+V RKLM+ ++K PG+
Sbjct: 833 IHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGW 892
Query: 483 SWV 485
S V
Sbjct: 893 SSV 895
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 171/365 (46%), Gaps = 46/365 (12%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL 126
+FS++P+P+ ++ ++ YT AL ++ MR+ + + T +++ SA ++
Sbjct: 307 VFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSM 366
Query: 127 ---GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
+Q+HA GF D V +I MY KS
Sbjct: 367 VCEASQVHAWVFKSGFYLDSSVAAALISMYSKS--------------------------- 399
Query: 184 YARNGDMNSARELFDELD-VKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
GD++ + ++F++LD ++ + M+T ++Q+ P +A+ F + + G+ TDE +
Sbjct: 400 ----GDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFS 455
Query: 243 LAGAISA--CAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
+ +S C LG ++ G ++ VGS+L +YSKCG++EE+Y +F
Sbjct: 456 VCSLLSVLDCLNLGKQVHGYTLKS-------GLVLDLTVGSSLFTLYSKCGSLEESYKLF 508
Query: 301 RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVD 360
+G+ ++ ++SMI GF +G R AI LF EML+ P+ T VL C+ +
Sbjct: 509 QGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLP 568
Query: 361 QGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGA 420
+G+ + G+ D + + ++ + G L+ A Q+ + +P E + +L+
Sbjct: 569 RGKEIHGYTLRA-GIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP-ELDPVSCSSLISG 626
Query: 421 SHVHG 425
HG
Sbjct: 627 YSQHG 631
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 127/255 (49%), Gaps = 15/255 (5%)
Query: 166 FDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEAL 225
FD + ++SW Y+ +G M A +LFD + D V+ M++GY Q+ + +E+L
Sbjct: 82 FDVFLTKSLLSW------YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESL 135
Query: 226 EFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVD 285
FF + G E +E++ ISAC+ L A ++ V C G+ +V SAL+D
Sbjct: 136 RFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYE--VVESALID 193
Query: 286 MYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVT 345
++SK E+AY VFR N + ++++I G + A LF+EM KP+ T
Sbjct: 194 VFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYT 253
Query: 346 FVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMA--DLLGRAGHLEKALQLVE 403
+ VL AC + G+ + + + C + D + C A DL + GH+ +A+++
Sbjct: 254 YSSVLAACASLEKLRFGKVVQARVIKC----GAEDVFVCTAIVDLYAKCGHMAEAMEVFS 309
Query: 404 TMPVEPNGAVWGALL 418
+P P+ W +L
Sbjct: 310 RIP-NPSVVSWTVML 323
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 155/354 (43%), Gaps = 44/354 (12%)
Query: 12 VVSILNTC---TTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFP-HLPIHSYPRLL 67
V S+++ C + + A Q+HA +++ + S + L+ + + L + L
Sbjct: 354 VTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDL- 412
Query: 68 FSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLG 127
+ N + + +I +++ +A+RL+T M + + F+ +L S + L LG
Sbjct: 413 -DDIQRQN--IVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLG 469
Query: 128 TQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARN 187
Q+H + L G D+ V +++ +Y K G L+ + K+F +P +D W +I+ +
Sbjct: 470 KQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEY 529
Query: 188 GDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAI 247
G + A LF E + + G DE TLA +
Sbjct: 530 GYLREAIGLFSE-------------------------------MLDDGTSPDESTLAAVL 558
Query: 248 SACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERN 307
+ C+ + + +G + +GSALV+MYSKCG+++ A V+ + E +
Sbjct: 559 TVCSSHPSLPRGKEIHGYTLRAGIDKGMD--LGSALVNMYSKCGSLKLARQVYDRLPELD 616
Query: 308 AFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
+ SS+I G++ HG + LF +M+ + + +L A A L D+
Sbjct: 617 PVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKA---AALSDE 667
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 125/257 (48%), Gaps = 12/257 (4%)
Query: 172 RDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCL 231
DV T ++ YA+ G M A E+F + V+WT M++GY ++ ALE F+ +
Sbjct: 283 EDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEM 342
Query: 232 REAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCG 291
R +G+E + T+ ISAC + +A V SGF + V +AL+ MYSK G
Sbjct: 343 RHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGF--YLDSSVAAALISMYSKSG 400
Query: 292 NVEEAYNVFRGMKE-RNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVL 350
+++ + VF + + + + MI F+ + AI+LF ML+ ++ + + +L
Sbjct: 401 DIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL 460
Query: 351 --VACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVE 408
+ C + G G L S G+V + + L + G LE++ +L + +P +
Sbjct: 461 SVLDCLNLGKQVHGYTLKS------GLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFK 514
Query: 409 PNGAVWGALLGASHVHG 425
N A W +++ + +G
Sbjct: 515 DN-ACWASMISGFNEYG 530
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 146/346 (42%), Gaps = 50/346 (14%)
Query: 22 LRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSA 81
LR K L AH+ R L +T + L + + + + LF +P P+ +
Sbjct: 64 LRTTKILQAHLLRRYLLPFDVFLT---KSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNI 120
Query: 82 LIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT---LGTQLHAHALLLG 138
+I Y F E+LR ++ M ++ ++ SA + L + H + +G
Sbjct: 121 MISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMG 180
Query: 139 FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFD 198
+ V + +I ++ K+ + A KVF + +V W +I RN + + +LF
Sbjct: 181 YFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFH 240
Query: 199 ELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQL----- 253
E M G+ + D T + ++ACA L
Sbjct: 241 E-----------MCVGFQK--------------------PDSYTYSSVLAACASLEKLRF 269
Query: 254 GASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSS 313
G A ++C AE +V V +A+VD+Y+KCG++ EA VF + + +++
Sbjct: 270 GKVVQARVIKCGAE--------DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTV 321
Query: 314 MIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLV 359
M+ G+ A +A+++F EM + ++ N+ T V+ AC +V
Sbjct: 322 MLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMV 367
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 143/478 (29%), Positives = 239/478 (50%), Gaps = 44/478 (9%)
Query: 12 VVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
++ + T ++ QLH + + L S + T+L+ + + R +F V
Sbjct: 148 LIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHF----YGKCGLIVEARRVFEAV 203
Query: 72 PSPNPFLYSALIRAYTLRGPFTEA---LRLYTSMRNQRITPISFTFSALFSAVTNLTLGT 128
+ L++AL+ +Y L G EA L+L S +N R FTFS+L SA + G
Sbjct: 204 LDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKN-RFRGDYFTFSSLLSAC-RIEQGK 261
Query: 129 QLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNG 188
Q+HA + + DI V ++ MY KS L AR+ F+ M R+VVSW +I +A+NG
Sbjct: 262 QIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNG 321
Query: 189 DMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAIS 248
+ A LF ++ +++ ++ DE+T A +S
Sbjct: 322 EGREAMRLFGQMLLEN-------------------------------LQPDELTFASVLS 350
Query: 249 ACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNA 308
+CA+ A + V+ + G A + V ++L+ YS+ GN+ EA F ++E +
Sbjct: 351 SCAKFSAIWEIKQVQAMVTKK--GSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDL 408
Query: 309 FTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSN 368
+++S+I A HG A ++++F ML+ +++P+ +TF+ VL AC+H GLV +G F
Sbjct: 409 VSWTSVIGALASHGFAEESLQMFESMLQ-KLQPDKITFLEVLSACSHGGLVQEGLRCFKR 467
Query: 369 MEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPD 428
M Y + +HY C+ DLLGRAG +++A ++ +MP EP+ A G ++H +
Sbjct: 468 MTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRE 527
Query: 429 VAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLK-KNPGYSWV 485
+ ++ L E+EP NY +LSN Y S G W+ + +RK R K PG SW+
Sbjct: 528 SMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 157/365 (43%), Gaps = 45/365 (12%)
Query: 117 LFSAVTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVS 176
L +++ +L+ Q H + G + +F+ N +++ Y K D A K+FDEMP R++V+
Sbjct: 45 LSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVT 104
Query: 177 WTELI-TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAG 235
W LI R+GD N L G+ + +
Sbjct: 105 WNILIHGVIQRDGDTNHRAHL-----------------GFC----------YLSRILFTD 137
Query: 236 METDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEE 295
+ D V+ G I C K + C+ G + ++LV Y KCG + E
Sbjct: 138 VSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESS--CFPSTSLVHFYGKCGLIVE 195
Query: 296 AYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEM--LETEIKPNHVTFVGVLVAC 353
A VF + +R+ +++++ + ++G A L M + + ++ TF +L AC
Sbjct: 196 ARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC 255
Query: 354 THAGLVDQGQYLFSNM-EGCYGV-VPSADHYACMADLLGRAGHLEKALQLVETMPVEPNG 411
++QG+ + + + + Y +P A + ++ ++ HL A + E+M V N
Sbjct: 256 R----IEQGKQIHAILFKVSYQFDIPVA---TALLNMYAKSNHLSDARECFESMVVR-NV 307
Query: 412 AVWGALL-GASHVHGNPDVAEIVSRHLFE-LEPNNIGNYLLLSNTYASAGRWDDVSRVRK 469
W A++ G + + + + L E L+P+ + +LS+ + W ++ +V+
Sbjct: 308 VSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIW-EIKQVQA 366
Query: 470 LMRDK 474
++ K
Sbjct: 367 MVTKK 371
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 225 bits (574), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 220/435 (50%), Gaps = 36/435 (8%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL 124
R +FS +P P+ ++A++ Y+ + EA+ + M+ Q + P T S + S+ L
Sbjct: 370 RRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARL 429
Query: 125 TL---GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
G Q+H + + + + + +I +Y + ++ + +FD
Sbjct: 430 RFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFD-------------- 475
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLRE-AGMETDE 240
+ +ELD+ W +M++G+ N + +AL FR + + A + +E
Sbjct: 476 -------------DCINELDI---ACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNE 519
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
+ A +S+C++L + + SG+ + V +AL DMY KCG ++ A F
Sbjct: 520 TSFATVLSSCSRLCSLLHGRQFHGLVVKSGY--VSDSFVETALTDMYCKCGEIDSARQFF 577
Query: 301 RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVD 360
+ +N ++ MI G+ +GR A+ L+ +M+ + KP+ +TFV VL AC+H+GLV+
Sbjct: 578 DAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVE 637
Query: 361 QGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGA 420
G + S+M+ +G+ P DHY C+ D LGRAG LE A +L E P + + +W LL +
Sbjct: 638 TGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSS 697
Query: 421 SHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNP 480
VHG+ +A V+ L L+P + Y+LLSNTY+S +WDD + ++ LM + K P
Sbjct: 698 CRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTP 757
Query: 481 GYSWVESRNGVIHEF 495
G SW N + F
Sbjct: 758 GQSWTTYGNDLDSGF 772
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 140/292 (47%), Gaps = 19/292 (6%)
Query: 127 GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYAR 186
G +H + +G SD ++ N ++ +Y++ G D ARKVFDEM RDV SW +T +
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 187 NGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGA 246
GD+ A E+FD + +D V+W M++ + ++AL ++ + G TLA
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 247 ISACAQLGASKDADWV---RCIAESSGFGPARNVLVGSALVDMYSKCGN-VEEAYNVFRG 302
+SAC SK D V RC + G +N+ VG+AL+ MY+KCG V+ VF
Sbjct: 145 LSAC-----SKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFES 199
Query: 303 MKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQG 362
+ + N +Y+++I G A + A+++F M E ++ + V +L D
Sbjct: 200 LSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSL 259
Query: 363 QYLFSNMEGCYGVVPSADHYACMADLLGRAG--HLEKALQLVETMPVEPNGA 412
++ N G C+A LG G HL +L + + NGA
Sbjct: 260 SEIYGNELG--------KQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGA 303
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 185/420 (44%), Gaps = 53/420 (12%)
Query: 60 IHSYPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFS 119
I Y +F + PN Y+A+I EA++++ M + + S S + S
Sbjct: 189 IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Query: 120 ------------AVTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFD 167
+ LG Q+H AL LGF D+ +NN+++++Y K+ ++ A +F
Sbjct: 249 ISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFA 308
Query: 168 EMPQRDVVSWTELITAYA-----------------------------------RNGDMNS 192
EMP+ +VVSW +I + R+GD+ +
Sbjct: 309 EMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVET 368
Query: 193 ARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQ 252
R +F + AW AM++GY+ +EA+ FR ++ ++ D+ TL+ +S+CA+
Sbjct: 369 GRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCAR 428
Query: 253 LGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG-MKERNAFTY 311
L + + + + ++N + S L+ +YS+C +E + +F + E + +
Sbjct: 429 LRFLEGGKQIHGVVIRTEI--SKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACW 486
Query: 312 SSMIVGFAIHGRARAAIKLFYEMLETEIK-PNHVTFVGVLVACTHAGLVDQGQYLFSNME 370
+SMI GF + A+ LF M +T + PN +F VL +C+ + G+ F +
Sbjct: 487 NSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQ-FHGLV 545
Query: 371 GCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVA 430
G V + + D+ + G ++ A Q + + + N +W ++ +G D A
Sbjct: 546 VKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAV-LRKNTVIWNEMIHGYGHNGRGDEA 604
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 170/385 (44%), Gaps = 64/385 (16%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL-- 124
+F +P + ++ +I +G +AL +Y M P FT +++ SA + +
Sbjct: 94 VFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLD 153
Query: 125 -TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSG-CLDSARKVFDEMPQRDVVSWTELIT 182
G + H A+ G +IFV N ++ MY K G +D +VF+ + Q
Sbjct: 154 GVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQ----------- 202
Query: 183 AYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
++V++TA++ G A+ EA++ FR + E G++ D V
Sbjct: 203 --------------------PNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVC 242
Query: 243 LAGAISACA---------QLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNV 293
L+ +S A ++ ++ + C+A GFG ++ + ++L+++Y+K ++
Sbjct: 243 LSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGG--DLHLNNSLLEIYAKNKDM 300
Query: 294 EEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVAC 353
A +F M E N +++ MIVGF R+ +++ M ++ +PN VT + VL AC
Sbjct: 301 NGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC 360
Query: 354 THAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMP---VEPN 410
+G V+ G+ +FS++ PS + M H E+A+ M ++P+
Sbjct: 361 FRSGDVETGRRIFSSIPQ-----PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPD 415
Query: 411 GAVWGALL----------GASHVHG 425
+L G +HG
Sbjct: 416 KTTLSVILSSCARLRFLEGGKQIHG 440
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 118/259 (45%), Gaps = 17/259 (6%)
Query: 15 ILNTCTTLR---RAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ- 70
IL++C LR KQ+H + R + ++S+I++ L+ + +F
Sbjct: 422 ILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLI----AVYSECEKMEISECIFDDC 477
Query: 71 VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRI-TPISFTFSALFSAVTNLTL--- 126
+ + ++++I + T+AL L+ M + P +F+ + S+ + L
Sbjct: 478 INELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLH 537
Query: 127 GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYAR 186
G Q H + G+ SD FV + MY K G +DSAR+ FD + +++ V W E+I Y
Sbjct: 538 GRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGH 597
Query: 187 NGDMNSA----RELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCL-REAGMETDEV 241
NG + A R++ + D + + +++T + + + + LE + R G+E +
Sbjct: 598 NGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELD 657
Query: 242 TLAGAISACAQLGASKDAD 260
+ + G +DA+
Sbjct: 658 HYICIVDCLGRAGRLEDAE 676
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 144/483 (29%), Positives = 233/483 (48%), Gaps = 18/483 (3%)
Query: 12 VVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
V S+L C + QLH + Y+ T+L+ + + +F +V
Sbjct: 135 VASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLV----SMYSRCGEWVLAARMFEKV 190
Query: 72 PSPNPFLYSALIRAYTLRGPFTEALRLYTSMRN-QRITPISFTFSALFSA---VTNLTLG 127
P + Y+A I G ++ MR P TF +A + NL G
Sbjct: 191 PHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYG 250
Query: 128 TQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQ-RDVVSWTELITAYAR 186
QLH + F + V +I MY K C SA VF E+ R+++SW +I+
Sbjct: 251 RQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMI 310
Query: 187 NGDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
NG +A ELF++LD + D W ++++G++Q EA +FF + M
Sbjct: 311 NGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKC 370
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
L +SAC+ + K+ + R++ V ++L+DMY KCG A +F
Sbjct: 371 LTSLLSACSDIWTLKNGKEIH--GHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDR 428
Query: 303 M--KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVD 360
K ++ ++ MI G+ HG +AI++F + E +++P+ TF VL AC+H G V+
Sbjct: 429 FEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVE 488
Query: 361 QGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGA 420
+G +F M+ YG PS +H CM DLLGR+G L +A ++++ M + +LLG+
Sbjct: 489 KGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGS 547
Query: 421 SHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNP 480
H +P + E + L ELEP N +++LS+ YA+ RW+DV +R+++ K L K P
Sbjct: 548 CRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLP 607
Query: 481 GYS 483
G S
Sbjct: 608 GLS 610
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 164/379 (43%), Gaps = 44/379 (11%)
Query: 15 ILNTCTTLRRAKQ---LHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
+L +C L Q LHA + + + T L+ + + + + + ++
Sbjct: 37 LLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALV----SMYMKVKQVTDALKVLDEM 92
Query: 72 PSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLH 131
P +A + G +A R++ R S T +++ ++ G QLH
Sbjct: 93 PERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGGMQLH 152
Query: 132 AHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMN 191
A+ GF +++V +++ MY + G A ++F+++P + VV++ I+ NG MN
Sbjct: 153 CLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMN 212
Query: 192 SARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACA 251
+F N M K + E E ++VT AI+ACA
Sbjct: 213 LVPSVF--------------------NLMRKFSSE----------EPNDVTFVNAITACA 242
Query: 252 QLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE-RNAFT 310
L + + + F +VG+AL+DMYSKC + AY VF +K+ RN +
Sbjct: 243 SLLNLQYGRQLHGLVMKKEF--QFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLIS 300
Query: 311 YSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNME 370
++S+I G I+G+ A++LF ++ +KP+ T+ ++ + G V + F M
Sbjct: 301 WNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERML 360
Query: 371 GCYGVVPSADHYACMADLL 389
+VPS C+ LL
Sbjct: 361 SVV-MVPS---LKCLTSLL 375
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 118/278 (42%), Gaps = 50/278 (17%)
Query: 108 TPISFTFSALFSAVTNL---TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARK 164
+P FTF L + L G LHA + GF D+F ++ MY+K + A K
Sbjct: 28 SPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALK 87
Query: 165 VFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEA 224
V DEMP+R + S +N+A V+G +N ++A
Sbjct: 88 VLDEMPERGIAS-------------VNAA------------------VSGLLENGFCRDA 116
Query: 225 LEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALV 284
F R +G + VT+A + C + + C+A SGF V VG++LV
Sbjct: 117 FRMFGDARVSGSGMNSVTVASVLGGCGDIEGGMQ---LHCLAMKSGF--EMEVYVGTSLV 171
Query: 285 DMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLE-TEIKPNH 343
MYS+CG A +F + ++ TY++ I G +G +F M + + +PN
Sbjct: 172 SMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPND 231
Query: 344 VTFVGVLVACTHA----------GLVDQGQYLFSNMEG 371
VTFV + AC GLV + ++ F M G
Sbjct: 232 VTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVG 269
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/480 (28%), Positives = 240/480 (50%), Gaps = 38/480 (7%)
Query: 12 VVSILNTCTTL----RRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLL 67
V S+L CT + + A+ HA + Q S +++ L + F H+ +
Sbjct: 151 VASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDD---HAAAFHV 207
Query: 68 FSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLG 127
F Q+ N ++A+I + + L+ +M+ + + P T ++ A L G
Sbjct: 208 FDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYG 267
Query: 128 TQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARN 187
+ L + GF+ + GC R +T Y R
Sbjct: 268 SSLVKE--IHGFS-------------FRHGCHADERLT------------AAFMTMYCRC 300
Query: 188 GDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAI 247
G+++ +R LF+ V+D V W++M++GYA+ E + +R+ G+E + VTL +
Sbjct: 301 GNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIV 360
Query: 248 SACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERN 307
SAC A V GF ++L+G+AL+DMY+KCG++ A VF + E++
Sbjct: 361 SACTNSTLLSFASTVHSQILKCGF--MSHILLGNALIDMYAKCGSLSAAREVFYELTEKD 418
Query: 308 AFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFS 367
++SSMI + +HG A+++F M++ + + + F+ +L AC HAGLV++ Q +F+
Sbjct: 419 LVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFT 478
Query: 368 NMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNP 427
G Y + + +HYAC +LLGR G ++ A ++ MP++P+ +W +LL A HG
Sbjct: 479 Q-AGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRL 537
Query: 428 DVA-EIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVE 486
DVA +I++ L + EP+N NY+LLS + +G + VR++M+ + L K G+S +E
Sbjct: 538 DVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 155/357 (43%), Gaps = 57/357 (15%)
Query: 92 FTEALRLYTSMRNQRITPISFTFSALFSAVTN--------LTLGTQLHAHALLLGFASDI 143
+ EALRLY ++ + FT A+ +V LG QLH L G D
Sbjct: 26 YDEALRLY-KLKIHSLGTNGFT--AILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDT 82
Query: 144 FVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVK 203
V+N++I MY K + RKVFDEM RD VS+ +I + ++G + A +L E+
Sbjct: 83 VVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEM--- 139
Query: 204 DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVR 263
Y +PK L +A ++ C ++G+S +
Sbjct: 140 -----------YFYGFIPKSEL-----------------VASLLALCTRMGSSSKVARMF 171
Query: 264 CIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGR 323
+VL+ +ALVDMY K + A++VF M+ +N ++++MI G +
Sbjct: 172 HALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQN 231
Query: 324 ARAAIKLFYEMLETEIKPNHVTFVGVLVACTH----AGLVDQGQYLFSNMEGCYGVVPSA 379
+ LF M ++PN VT + VL AC + LV + + FS GC+ A
Sbjct: 232 YEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKE-IHGFSFRHGCH-----A 285
Query: 380 DH--YACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVS 434
D A + R G++ + L ET V + +W +++ G D +E+++
Sbjct: 286 DERLTAAFMTMYCRCGNVSLSRVLFETSKVR-DVVMWSSMISGYAETG--DCSEVMN 339
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 133/464 (28%), Positives = 236/464 (50%), Gaps = 39/464 (8%)
Query: 24 RAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSP-NPFLYSAL 82
+ K H + RH S + +LL + + + S LF ++ N ++ +
Sbjct: 349 QGKAFHGFVIRHCFSLDSTVCNSLL----SMYCKFELLSVAEKLFCRISEEGNKEAWNTM 404
Query: 83 IRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHAHALLLGFASD 142
++ Y + + L+ ++N I S + +++ S+ + H A+LLG +
Sbjct: 405 LKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCS--------HIGAVLLGKSLH 456
Query: 143 IFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDV 202
+V T + + + VV+ LI Y + GD+ A +F E D
Sbjct: 457 CYVVKTSLDLTIS------------------VVN--SLIDLYGKMGDLTVAWRMFCEADT 496
Query: 203 KDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWV 262
+ + W AM+ Y ++A+ F + + +TL + AC G+ + +
Sbjct: 497 -NVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMI 555
Query: 263 -RCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIH 321
R I E+ N+ + +AL+DMY+KCG++E++ +F +++A ++ MI G+ +H
Sbjct: 556 HRYITETE---HEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMH 612
Query: 322 GRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADH 381
G +AI LF +M E+++KP TF+ +L ACTHAGLV+QG+ LF M Y V P+ H
Sbjct: 613 GDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLKH 671
Query: 382 YACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELE 441
Y+C+ DLL R+G+LE+A V +MP P+G +WG LL + HG ++ ++ +
Sbjct: 672 YSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASD 731
Query: 442 PNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWV 485
P N G Y++L+N Y++AG+W++ R R++MR+ + K G+S V
Sbjct: 732 PQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 136/300 (45%), Gaps = 32/300 (10%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL 126
+F V + FL++++I+A+ G + +L + SM +P FT + SA
Sbjct: 81 VFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSAC----- 135
Query: 127 GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYAR 186
A LL F FV+ + +K G D R+ + Y++
Sbjct: 136 -------AELLWFHVGTFVHG----LVLKHGGFD-----------RNTAVGASFVYFYSK 173
Query: 187 NGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV---TL 243
G + A +FDE+ +D VAWTA+++G+ QN + L + + AG + D+ TL
Sbjct: 174 CGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTL 233
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
AC+ LGA K+ + A +G ++ V S++ YSK GN EAY FR +
Sbjct: 234 ECGFQACSNLGALKEGRCLHGFAVKNGLASSK--FVQSSMFSFYSKSGNPSEAYLSFREL 291
Query: 304 KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQ 363
+ + F+++S+I A G + +F+EM + P+ V ++ LV QG+
Sbjct: 292 GDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGK 351
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 149/370 (40%), Gaps = 52/370 (14%)
Query: 66 LLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRI---TPISFTFSALFSAVT 122
L+F ++P + ++A+I + G L M + P T F A +
Sbjct: 182 LVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACS 241
Query: 123 NLTL---GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTE 179
NL G LH A+ G AS FV ++M Y KSG A F E+ D+ SWT
Sbjct: 242 NLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTS 301
Query: 180 LITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETD 239
+I + AR+GDM + ++F E+ K GM D
Sbjct: 302 IIASLARSGDMEESFDMFWEMQNK-------------------------------GMHPD 330
Query: 240 EVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNV 299
V ++ I+ ++ F + + V ++L+ MY K + A +
Sbjct: 331 GVVISCLINELGKMMLVPQGKAFHGFVIRHCF--SLDSTVCNSLLSMYCKFELLSVAEKL 388
Query: 300 F-RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGL 358
F R +E N +++M+ G+ I+LF ++ I+ + + V+ +C+H G
Sbjct: 389 FCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGA 448
Query: 359 VDQGQYLFSNMEGCYGVVPSADH----YACMADLLGRAGHLEKALQLVETMPVEPNGAVW 414
V G+ L CY V S D + DL G+ G L A ++ + N W
Sbjct: 449 VLLGKSLH-----CYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF--CEADTNVITW 501
Query: 415 GALLGASHVH 424
A++ AS+VH
Sbjct: 502 NAMI-ASYVH 510
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 4/191 (2%)
Query: 178 TELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGME 237
++LI++YA G N + +F + +D W +++ + N +L FF + +G
Sbjct: 63 SKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQS 122
Query: 238 TDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAY 297
D T +SACA+L +V + G G RN VG++ V YSKCG +++A
Sbjct: 123 PDHFTAPMVVSACAELLWFHVGTFVHGLVLKHG-GFDRNTAVGASFVYFYSKCGFLQDAC 181
Query: 298 NVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEI---KPNHVTFVGVLVACT 354
VF M +R+ ++++I G +G + + +M KPN T AC+
Sbjct: 182 LVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACS 241
Query: 355 HAGLVDQGQYL 365
+ G + +G+ L
Sbjct: 242 NLGALKEGRCL 252
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 144/502 (28%), Positives = 246/502 (49%), Gaps = 45/502 (8%)
Query: 26 KQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIRA 85
+QLH ++ +H ++ + +L+R T+ H +F ++P P+ +++L+
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHK----VFDEMPDPDVISWNSLVSG 130
Query: 86 YTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL---TLGTQLHAHALLLGF-AS 141
Y G F E + L+ + + P F+F+A +A L LG +H+ + LG
Sbjct: 131 YVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKG 190
Query: 142 DIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWT----------------------- 178
++ V N +I MY K G +D A VF M ++D VSW
Sbjct: 191 NVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMP 250
Query: 179 --------ELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRC 230
ELI A+ ++GD N+A ++ ++ + +W ++TGY + EA EFF
Sbjct: 251 NPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTK 310
Query: 231 LREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKC 290
+ +G+ DE +L+ ++A A L + A G V+V SAL+DMYSKC
Sbjct: 311 MHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDS--RVVVASALIDMYSKC 368
Query: 291 GNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEM-LETEIKPNHVTFVGV 349
G ++ A +F M +N ++ MI G+A +G + AIKLF ++ E +KP+ TF+ +
Sbjct: 369 GMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNL 428
Query: 350 LVACTHAGL-VDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVE 408
L C+H + ++ F M Y + PS +H + +G+ G + +A Q+++
Sbjct: 429 LAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFG 488
Query: 409 PNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYL--LLSNTYASAGRWDDVSR 466
+G W ALLGA + A+ V+ + EL + YL ++SN YA RW +V +
Sbjct: 489 YDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQ 548
Query: 467 VRKLMRDKNLKKNPGYSWVESR 488
+RK+MR+ + K G SW++SR
Sbjct: 549 IRKIMRESGVLKEVGSSWIDSR 570
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 127/300 (42%), Gaps = 83/300 (27%)
Query: 124 LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
++L QLH + GF S+ ++N++++ Y S L+ A KVFDEMP DV+SW L++
Sbjct: 71 VSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSG 130
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
Y ++G LF EL D P +E +
Sbjct: 131 YVQSGRFQEGICLFLELHRSD--------------VFP-----------------NEFSF 159
Query: 244 AGAISACAQ-----LGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYN 298
A++ACA+ LGA + V+ E NV+VG+ L+DMY KCG +++A
Sbjct: 160 TAALAACARLHLSPLGACIHSKLVKLGLEKG------NVVVGNCLIDMYGKCGFMDDAVL 213
Query: 299 VFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGL 358
VF+ M+E++ ++++++ + +G+ + F++M PN
Sbjct: 214 VFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM------PN---------------- 251
Query: 359 VDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALL 418
P Y + D ++G A Q++ MP PN + W +L
Sbjct: 252 ------------------PDTVTYNELIDAFVKSGDFNNAFQVLSDMP-NPNSSSWNTIL 292
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 222 bits (566), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 151/533 (28%), Positives = 250/533 (46%), Gaps = 80/533 (15%)
Query: 26 KQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIRA 85
++LH+ + + L + Y T L R + R LF P + FL++++IRA
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLIS----ARKLFDVFPERSVFLWNSIIRA 80
Query: 86 YTLRGPFTEALRLYTSMRNQRITPISFTFSAL---FSAVTNLTLGTQLHAHALLLGFASD 142
Y FT L L++ + P +FT++ L FS + +H A++ G D
Sbjct: 81 YAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFD 140
Query: 143 IFVNNTMIKMYVKS----------------------------GCL---DSARKVFDEMPQ 171
+ ++K Y K+ GC D +F+ M
Sbjct: 141 QICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQH 200
Query: 172 RD---------------------VVSWT------------------ELITAYARNGDMNS 192
R +V+W+ L+ Y+R + S
Sbjct: 201 RGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIAS 260
Query: 193 ARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQ 252
A +F+ + D VA ++++TGY++ KEAL F LR +G + D V +A + +CA+
Sbjct: 261 ACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAE 320
Query: 253 LGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYS 312
L S V + G ++ V SAL+DMYSKCG ++ A ++F G+ E+N +++
Sbjct: 321 LSDSVSGKEVH--SYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFN 378
Query: 313 SMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGC 372
S+I+G +HG A A + F E+LE + P+ +TF +L C H+GL+++GQ +F M+
Sbjct: 379 SLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSE 438
Query: 373 YGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEI 432
+G+ P +HY M L+G AG LE+A + V ++ + + GALL VH N +AE+
Sbjct: 439 FGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEV 498
Query: 433 VSRHLFELEPNNIGNY-LLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSW 484
V+ ++ + Y ++LSN YA GRWD+V R+R + + K PG SW
Sbjct: 499 VAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 100/251 (39%), Gaps = 53/251 (21%)
Query: 118 FSAVTNLTLGTQ-LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVS 176
F+ L TQ LH+ A D + + + Y + L SARK+FD P+R V
Sbjct: 14 FTRKIQTRLNTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFL 73
Query: 177 WTELITAYARNGDMNSARELFDEL---DVK-DKVAWTAMVTGYAQNAMPKEALEFFRCLR 232
W +I AYA+ + LF ++ D + D + + G+++
Sbjct: 74 WNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSE--------------- 118
Query: 233 EAGMETDEVTLAGAISACAQLGASKDADWVRC---IAESSGFGPARNVLVGSALVDMYSK 289
S D +RC IA SG G + + GSA+V YSK
Sbjct: 119 -----------------------SFDTKGLRCIHGIAIVSGLG--FDQICGSAIVKAYSK 153
Query: 290 CGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGV 349
G + EA +F + + + ++ MI+G+ G I LF M +PN T V +
Sbjct: 154 AGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVAL 213
Query: 350 LVACTHAGLVD 360
+GL+D
Sbjct: 214 T-----SGLID 219
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 149/503 (29%), Positives = 237/503 (47%), Gaps = 84/503 (16%)
Query: 23 RRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPF-LYSA 81
A + +++ N+ S I NLL + H P+H L + N + ++
Sbjct: 234 EEAITVFKNMFEKNVEISPVTIINLL---SAHVSHEPLHC----LVVKCGMVNDISVVTS 286
Query: 82 LIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSAL------------FSAVTNLTL--- 126
L+ AY+ G A RLY S + I ++ S FS L +
Sbjct: 287 LVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKID 346
Query: 127 -------------------GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFD 167
G LH +A+ G + V N +I MY K +++ +F+
Sbjct: 347 AVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFE 406
Query: 168 EMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEF 227
++ + ++SW +I+ ++G ++A E+F ++ M+TG
Sbjct: 407 QLQETPLISWNSVISGCVQSGRASTAFEVFHQM----------MLTG------------- 443
Query: 228 FRCLREAGMETDEVTLAGAISACAQ-----LGASKDADWVRCIAESSGFGPARNVLVGSA 282
G+ D +T+A ++ C+Q LG +R E+ F V +A
Sbjct: 444 -------GLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENF-------VCTA 489
Query: 283 LVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPN 342
L+DMY+KCGN +A +VF+ +K T++SMI G+++ G A+ + EM E +KP+
Sbjct: 490 LIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPD 549
Query: 343 HVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLV 402
+TF+GVL AC H G VD+G+ F M +G+ P+ HYA M LLGRA +AL L+
Sbjct: 550 EITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLI 609
Query: 403 ETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWD 462
M ++P+ AVWGALL A +H +V E V+R +F L+ N G Y+L+SN YA+ WD
Sbjct: 610 WKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWD 669
Query: 463 DVSRVRKLMRDKNLKKNPGYSWV 485
DV RVR +M+D G S +
Sbjct: 670 DVVRVRNMMKDNGYDGYLGVSQI 692
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 117/265 (44%), Gaps = 38/265 (14%)
Query: 93 TEALRLYTSMRNQRITPISFTFSALFSAVT----NLTLGT-QLHAHALLLGFASDIFVNN 147
+ + ++ + +TP FT S A T + L Q+ H G ++V
Sbjct: 30 SSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKT 89
Query: 148 TMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVA 207
+++ +Y+K GC+ SA+ +FDEMP+RD V W LI Y+RNG E D A
Sbjct: 90 SLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG---------YECD-----A 135
Query: 208 WTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAE 267
W + F + + G TL + C Q G V +A
Sbjct: 136 W-----------------KLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAA 178
Query: 268 SSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAA 327
SG + V +AL+ YSKC + A +FR MK+++ ++++MI ++ G A
Sbjct: 179 KSGL--ELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEA 236
Query: 328 IKLFYEMLETEIKPNHVTFVGVLVA 352
I +F M E ++ + VT + +L A
Sbjct: 237 ITVFKNMFEKNVEISPVTIINLLSA 261
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/477 (21%), Positives = 187/477 (39%), Gaps = 90/477 (18%)
Query: 24 RAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALI 83
+ +Q+ H+ + L + Y+ T+LL + + ++LF ++P + +++ALI
Sbjct: 68 QVEQVQTHLTKSGLDRFVYVKTSLLN----LYLKKGCVTSAQMLFDEMPERDTVVWNALI 123
Query: 84 RAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN---LTLGTQLHAHALLLGFA 140
Y+ G +A +L+ M Q +P + T L ++ G +H A G
Sbjct: 124 CGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLE 183
Query: 141 SDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDEL 200
D V N +I Y K L SA +F EM + VSW +I AY+++G A +F +
Sbjct: 184 LDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNM 243
Query: 201 ---------------------------------DVKDKVAWTAMVTGYAQNAMPKEALEF 227
V D T++V Y++ A
Sbjct: 244 FEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERL 303
Query: 228 F---------------RCLREAG----------------METDEVTLAGAISACAQLGAS 256
+ C E G M+ D V L G + C +
Sbjct: 304 YASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHI 363
Query: 257 KDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIV 316
+ A SG LV + L+ MYSK +VE +F ++E +++S+I
Sbjct: 364 DIGMSLHGYAIKSGL--CTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVIS 421
Query: 317 GFAIHGRARAAIKLFYEMLET-EIKPNHVTFVGVLVACTHAGLVDQGQYLF-----SNME 370
G GRA A ++F++M+ T + P+ +T +L C+ ++ G+ L +N E
Sbjct: 422 GCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFE 481
Query: 371 GCYGVVPSADHYACMA--DLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHG 425
+++ C A D+ + G+ +A + +++ P A W +++ + G
Sbjct: 482 N--------ENFVCTALIDMYAKCGNEVQAESVFKSIKA-PCTATWNSMISGYSLSG 529
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 216 bits (549), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 228/459 (49%), Gaps = 42/459 (9%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSM-RNQRITPISFTFSALFSAVTN-- 123
+F ++ +PN ++++I + G +A+ +Y + R P +TFSA SA
Sbjct: 357 VFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPE 416
Query: 124 -LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELIT 182
G LH LG+ +FV T++ MY
Sbjct: 417 RFVHGKLLHGQVTKLGYERSVFVGTTLLSMYF---------------------------- 448
Query: 183 AYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
+N + SA+++FD + +D V WT M+ G+++ + A++FF + +D +
Sbjct: 449 ---KNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFS 505
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
L+ I AC+ + + + C+A +GF +V ALVDMY K G E A +F
Sbjct: 506 LSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVC--GALVDMYGKNGKYETAETIFSL 563
Query: 303 MKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQG 362
+ ++SM+ ++ HG A+ F ++LE P+ VT++ +L AC+H G QG
Sbjct: 564 ASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQG 623
Query: 363 QYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGA-VWGALLGAS 421
++L++ M+ G+ HY+CM +L+ +AG +++AL+L+E P N A +W LL A
Sbjct: 624 KFLWNQMKE-QGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSAC 682
Query: 422 HVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPG 481
N + + + +L+P + ++LLSN YA GRW+DV+ +R+ +R K+PG
Sbjct: 683 VNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPG 742
Query: 482 YSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLK 520
SW+E N F +GD +PE+ + +A D+ L RLK
Sbjct: 743 LSWIEVNNNNTQVFSSGDQSNPEV--VSQAQDE-LNRLK 778
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 167/354 (47%), Gaps = 52/354 (14%)
Query: 12 VVSILNTC---TTLRRAKQLHAHIYRHNL---HQSSYIITNLLRHLTTTFPHLPIHSYPR 65
VV + C T L+RA+Q+HA + +S Y NL+ + + R
Sbjct: 97 VVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLI----SMYVRCGSLEQAR 152
Query: 66 LLFSQVPSPNPFLYSALIRAYTLRGPFTE-ALRLYTSMRNQRITPISFTFSALF---SAV 121
+F ++P N Y+AL AY+ F A L T M + + P S TF++L + +
Sbjct: 153 KVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVL 212
Query: 122 TNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
++ +G+ L++ + LG++ ++ V +++ MY S C
Sbjct: 213 EDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMY--SSC----------------------- 247
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
GD+ SAR +FD ++ +D VAW M+ G +N ++ L FFR + +G++ +
Sbjct: 248 ------GDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQF 301
Query: 242 TLAGAISACAQLGASKDADWV--RCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNV 299
T + ++ C++LG+ + R I S ++ + +AL+DMY CG++ EA+ V
Sbjct: 302 TYSIVLNGCSKLGSYSLGKLIHARIIVSDS----LADLPLDNALLDMYCSCGDMREAFYV 357
Query: 300 FRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEI-KPNHVTFVGVLVA 352
F + N +++S+I G + +G A+ ++ +L +P+ TF + A
Sbjct: 358 FGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISA 411
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 159/369 (43%), Gaps = 47/369 (12%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL 124
R +F V + + ++ +I + L + +M + P FT+S + + + L
Sbjct: 254 RRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKL 313
Query: 125 ---TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
+LG +HA ++ +D+ ++N ++ MY G
Sbjct: 314 GSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCG------------------------ 349
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFR-CLREAGMETDE 240
DM A +F + + V+W ++++G ++N ++A+ +R LR + DE
Sbjct: 350 -------DMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDE 402
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
T + AISA A+ + + + G R+V VG+ L+ MY K E A VF
Sbjct: 403 YTFSAAISATAEPERFVHGKLLH--GQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVF 460
Query: 301 RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVD 360
MKER+ ++ MIVG + G + A++ F EM + + + + V+ AC+ ++
Sbjct: 461 DVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLR 520
Query: 361 QGQYLFSNMEGCYGVVPSADHY----ACMADLLGRAGHLEKALQLVETMPVEPNGAVWGA 416
QG+ C + D + D+ G+ G E A + + ++ P+ W +
Sbjct: 521 QGEVFH-----CLAIRTGFDCVMSVCGALVDMYGKNGKYETA-ETIFSLASNPDLKCWNS 574
Query: 417 LLGASHVHG 425
+LGA HG
Sbjct: 575 MLGAYSQHG 583
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 179/413 (43%), Gaps = 51/413 (12%)
Query: 76 PFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHAHAL 135
P+ + LI Y +A +++ M + I + F SA+F V+ +G+ LH+ +
Sbjct: 22 PYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTL-FGLSAVFEYVS---MGSSLHSQII 77
Query: 136 LLGFASDIF------VNNTMIKMY---VKSGCLDSARKVFDEMPQRDVVSWTE------- 179
LG IF + ++++++ V L AR++ + + TE
Sbjct: 78 KLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNN 137
Query: 180 LITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGME-- 237
LI+ Y R G + AR++FD++ ++ V++ A+ + Y++N P A F E
Sbjct: 138 LISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRN--PDFASYAFPLTTHMAFEYV 195
Query: 238 -TDEVTLAGAISACAQL-----GASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCG 291
+ T + CA L G+S ++ ++ G + NV+V ++++ MYS CG
Sbjct: 196 KPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIK-------LGYSDNVVVQTSVLGMYSSCG 248
Query: 292 NVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLV 351
++E A +F + R+A +++MIVG + + + F ML + + P T+ VL
Sbjct: 249 DLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLN 308
Query: 352 ACTHAGLVDQGQYLFSNMEGCYGVVPSADHYA------CMADLLGRAGHLEKALQLVETM 405
C+ G G+ + + + +D A + D+ G + +A + +
Sbjct: 309 GCSKLGSYSLGKLI-------HARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRI 361
Query: 406 PVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASA 458
PN W +++ +G + A ++ R L + Y + A+A
Sbjct: 362 H-NPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATA 413
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 215 bits (548), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 134/490 (27%), Positives = 237/490 (48%), Gaps = 52/490 (10%)
Query: 6 RALEWQVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPR 65
R + VS++ +C+ Q+H + ++ +++N + ++F
Sbjct: 288 RPTDLTFVSVMGSCSCAAMGHQVHGLAIKTG-YEKYTLVSNATMTMYSSFEDFGA---AH 343
Query: 66 LLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT 125
+F + + ++ +I +Y A+ +Y M + P FTF +L + +L
Sbjct: 344 KVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLD 403
Query: 126 LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYA 185
+ + A + G +S I ++N LI+AY+
Sbjct: 404 VLEMVQACIIKFGLSSKIEISNA-------------------------------LISAYS 432
Query: 186 RNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET--DEVTL 243
+NG + A LF+ K+ ++W A+++G+ N P E LE F CL E+ + D TL
Sbjct: 433 KNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTL 492
Query: 244 AGAISACAQ-----LGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYN 298
+ +S C LG+ A +R G + L+G+AL++MYS+CG ++ +
Sbjct: 493 STLLSICVSTSSLMLGSQTHAYVLR-------HGQFKETLIGNALINMYSQCGTIQNSLE 545
Query: 299 VFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEML-ETEIKPNHVTFVGVLVACTHAG 357
VF M E++ +++S+I ++ HG A+ + M E ++ P+ TF VL AC+HAG
Sbjct: 546 VFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAG 605
Query: 358 LVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVET--MPVEPNGAVWG 415
LV++G +F++M +GV+ + DH++C+ DLLGRAGHL++A LV+ + VW
Sbjct: 606 LVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWW 665
Query: 416 ALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKN 475
AL A HG+ + ++V++ L E E ++ Y+ LSN YA AG W + R+ +
Sbjct: 666 ALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIG 725
Query: 476 LKKNPGYSWV 485
K G SW+
Sbjct: 726 AMKQRGCSWM 735
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 149/282 (52%), Gaps = 11/282 (3%)
Query: 87 TLRGPFTEALRLYTSM-RNQRITPISFTFSALFSAVTNL---TLGTQLHAHALLLGFASD 142
T G AL+L+ + R + P ++ S + +L G Q+H +A+ G
Sbjct: 32 TRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCH 91
Query: 143 IFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDV 202
V+NT++ +Y + G L S +K FDE+ + DV SWT L++A + GD+ A E+FD++
Sbjct: 92 SHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPE 151
Query: 203 KDKVA-WTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADW 261
+D VA W AM+TG ++ + ++E FR + + G+ D+ A +S C G+
Sbjct: 152 RDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQ 210
Query: 262 VRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR--GMKERNAFTYSSMIVGFA 319
V + +GF A +V+ +AL+ MY C V +A VF + R+ T++ +I G A
Sbjct: 211 VHSLVIKAGFFIASSVV--NALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA 268
Query: 320 IHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
R + + +F +MLE ++P +TFV V+ +C+ A + Q
Sbjct: 269 GFKRDESLL-VFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQ 309
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 174/310 (56%), Gaps = 6/310 (1%)
Query: 180 LITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETD 239
LIT Y R D+ SA ++F + + +W +++ +QN +E + FR L+ +E +
Sbjct: 622 LITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK---LEPN 678
Query: 240 EVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNV 299
E+T G +SA QLG++ C GF N V +ALVDMYS CG +E V
Sbjct: 679 EITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQA--NPFVSAALVDMYSSCGMLETGMKV 736
Query: 300 FRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLE-TEIKPNHVTFVGVLVACTHAGL 358
FR + ++S+I HG A++LF E+ +E++PN +F+ +L AC+H+G
Sbjct: 737 FRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGF 796
Query: 359 VDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALL 418
+D+G + ME +GV P +H + D+LGRAG L +A + + + VWGALL
Sbjct: 797 IDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALL 856
Query: 419 GASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKK 478
A + HG+ + + V+ LFE+EP+N Y+ L+NTY G W++ R+RK++ D LKK
Sbjct: 857 SACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKK 916
Query: 479 NPGYSWVESR 488
PGYS ++ R
Sbjct: 917 LPGYSVIDVR 926
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 136/301 (45%), Gaps = 35/301 (11%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSM---RNQRITPISFTFSALFSAVTN 123
LF ++ + +++++I A G + A+ L+ M N+ + ++ S++
Sbjct: 144 LFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHL 203
Query: 124 LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
+ LH A+ G D + N ++ +Y K L SA VF M RD+VSW ++T
Sbjct: 204 SRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTK 263
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
NG P+++L++F+ + +G E D VT
Sbjct: 264 CLANGH-------------------------------PRKSLQYFKSMTGSGQEADTVTF 292
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
+ ISAC+ + + + + SG+ P +V VG++++ MYSKCG+ E A VF +
Sbjct: 293 SCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEEL 352
Query: 304 KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETE-IKPNHVTFVGVLVACTHAGLVDQG 362
R+ + ++++ GFA +G A + +M + I+P+ T V + C +G
Sbjct: 353 VCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREG 412
Query: 363 Q 363
+
Sbjct: 413 R 413
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/471 (22%), Positives = 195/471 (41%), Gaps = 71/471 (15%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRN-QRITPISFTFSALFSAVTNLT 125
+F ++ + +A++ + G F EA + M++ +I P T ++ S +L+
Sbjct: 348 VFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLS 407
Query: 126 L---GTQLHAHALLLGFASDIF-VNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
G +H + + + S V N++I MY K G A +F RD+VSW +I
Sbjct: 408 FSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMI 467
Query: 182 TAYARNG----------------------------------------------------- 188
+A+++NG
Sbjct: 468 SAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLG 527
Query: 189 DMNSARELFDEL-DVKDKVAWTAMVTGYAQNAMPKEALEFFRCL-REAGMETDEVTLAGA 246
D+ SA + + + +D +W ++++G A + E+L F+ + RE + D +TL G
Sbjct: 528 DLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGT 587
Query: 247 ISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER 306
ISA LG +A S + + + L+ MY +C ++E A VF + +
Sbjct: 588 ISASGNLGLVLQGRCFHGLAIKSL--RELDTQLQNTLITMYGRCKDIESAVKVFGLISDP 645
Query: 307 NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLF 366
N +++ +I + + R +LF + +++PN +TFVG+L A T G G
Sbjct: 646 NLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAH 702
Query: 367 SNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGN 426
++ G + A + D+ G LE +++ V A W +++ A HG
Sbjct: 703 CHLIR-RGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISA-WNSVISAHGFHGM 760
Query: 427 PDVAEIVSRHL---FELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDK 474
+ A + + L E+EPN +++ L + + +G D+ K M +K
Sbjct: 761 GEKAMELFKELSSNSEMEPNK-SSFISLLSACSHSGFIDEGLSYYKQMEEK 810
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 136/326 (41%), Gaps = 55/326 (16%)
Query: 48 LRHLTTTFPHLPIHSYPRL--------LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLY 99
LR L T + I Y R +F + PN ++ +I A + E +L+
Sbjct: 611 LRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLF 670
Query: 100 TSMRNQRITPISFTFSALFSAVTNL---TLGTQLHAHALLLGFASDIFVNNTMIKMYVKS 156
RN ++ P TF L SA T L + G Q H H + GF ++ FV+ ++ MY
Sbjct: 671 ---RNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSC 727
Query: 157 GCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYA 216
G L++ KVF + +W +I+A+ +G A ELF EL +
Sbjct: 728 GMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSE----------- 776
Query: 217 QNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDA-DWVRCIAESSGFGPAR 275
ME ++ + +SAC+ G + + + + E G P
Sbjct: 777 -------------------MEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVT 817
Query: 276 NVLVGSALVDMYSKCGNVEEAYNVFRGMKE-RNAFTYSSMIVGFAIHGRARAAIKLFYEM 334
V +VDM + G + EAY G+ E + A + +++ HG KL E+
Sbjct: 818 EHRV--WIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDT----KLGKEV 871
Query: 335 LET--EIKPNHVTFVGVLVACTHAGL 358
E E++P++ ++ + +A T+ GL
Sbjct: 872 AEVLFEMEPDNASYY-ISLANTYVGL 896
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 137/337 (40%), Gaps = 52/337 (15%)
Query: 94 EALRLYTSMRNQRITPISFTFSALFSA---VTNLTLGTQLHAHALLLGFASDIFVNNTMI 150
++L+ + SM + TFS + SA + LTLG LH + G++
Sbjct: 272 KSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYS---------- 321
Query: 151 KMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTA 210
P+ V +I+ Y++ GD +A +F+EL +D ++ A
Sbjct: 322 -------------------PEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNA 362
Query: 211 MVTGYAQNAMPKEALEFFRCLREAG-METDEVTLAGAISACAQLGASKDADWVRCIAESS 269
++ G+A N M +EA ++ ++ D T+ S C L S++ V
Sbjct: 363 ILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRM 422
Query: 270 GFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIK 329
+R + V ++++DMY KCG +A +F+ R+ +++SMI F+ +G A
Sbjct: 423 EM-QSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKN 481
Query: 330 LFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLL 389
LF E++ +E + + VL T D +F C+ L
Sbjct: 482 LFKEVV-SEYSCSKFSLSTVLAILTSCDSSD--SLIFGKSVHCW---------------L 523
Query: 390 GRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGN 426
+ G L A +ETM + W +++ G+
Sbjct: 524 QKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGH 560
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 102/194 (52%), Gaps = 2/194 (1%)
Query: 172 RDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCL 231
+D+ + ++L+T Y R G++ S+ LFDEL KD + W +M+T QN A+ F +
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
Query: 232 REAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCG 291
G E D TL A SA + L S+ + C+A +G ++ +AL+++Y+K
Sbjct: 180 IHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC--NALMNLYAKGE 237
Query: 292 NVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLV 351
N+ A VF M+ R+ ++++++ +G R +++ F M + + + VTF V+
Sbjct: 238 NLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVIS 297
Query: 352 ACTHAGLVDQGQYL 365
AC+ + G+ L
Sbjct: 298 ACSSIEELTLGESL 311
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 229/470 (48%), Gaps = 44/470 (9%)
Query: 22 LRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ---VPSPNPFL 78
L KQLH + + L S + I+ L+ + + Y +F Q + + +
Sbjct: 254 LTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLI----YAADVFHQEKLAVNSSVAV 309
Query: 79 YSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV---TNLTLGTQLHAHAL 135
+++++ + + AL L + + S+T S NL LG Q+H+ +
Sbjct: 310 WNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVV 369
Query: 136 LLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARE 195
+ G+ D V + ++ ++ A G++ A +
Sbjct: 370 VSGYELDYIVGSILVDLH-------------------------------ANVGNIQDAHK 398
Query: 196 LFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGA 255
LF L KD +A++ ++ G ++ A FR L + G++ D+ ++ + C+ L +
Sbjct: 399 LFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLAS 458
Query: 256 SKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMI 315
+ + G+ + +ALVDMY KCG ++ +F GM ER+ +++ +I
Sbjct: 459 LGWGKQIHGLCIKKGY--ESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGII 516
Query: 316 VGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGV 375
VGF +GR A + F++M+ I+PN VTF+G+L AC H+GL+++ + M+ YG+
Sbjct: 517 VGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGL 576
Query: 376 VPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSR 435
P +HY C+ DLLG+AG ++A +L+ MP+EP+ +W +LL A H N + +++
Sbjct: 577 EPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAE 636
Query: 436 HLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWV 485
L + P++ Y LSN YA+ G WD +S+VR+ + K++ G SW+
Sbjct: 637 KLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLGAKES-GMSWI 685
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 205/454 (45%), Gaps = 30/454 (6%)
Query: 22 LRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSA 81
+R + + AH+ + + Q+ +I N++ + + + S +F ++ N ++
Sbjct: 21 FKRGESIQAHVIKQGISQNVFIANNVI----SMYVDFRLLSDAHKVFDEMSERNIVTWTT 76
Query: 82 LIRAYTLRGPFTEALRLYTSMRN-QRITPISFTFSALFSA---VTNLTLGTQLHAHALLL 137
++ YT G +A+ LY M + + F +SA+ A V ++ LG ++
Sbjct: 77 MVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKE 136
Query: 138 GFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELF 197
D+ + N+++ MYVK+G L A F E+ + SW LI+ Y + G M+ A LF
Sbjct: 137 NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLF 196
Query: 198 DELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASK 257
+ + V+W +++G+ P+ ALEF ++ G+ D L + AC+ G
Sbjct: 197 HRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCGLKACSFGGLLT 255
Query: 258 DADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK---ERNAFTYSSM 314
+ C SG + + SAL+DMYS CG++ A +VF K + ++SM
Sbjct: 256 MGKQLHCCVVKSGLESSPFAI--SALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSM 313
Query: 315 IVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTH-----AGLVDQGQYLFSNM 369
+ GF I+ AA+ L ++ ++++ + T G L C + GL + S
Sbjct: 314 LSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGY 373
Query: 370 EGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDV 429
E Y +V S + DL G+++ A +L +P + A G + G G +
Sbjct: 374 ELDY-IVGSI-----LVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVK-SGFNSL 426
Query: 430 AEIVSRHLFELEPNN----IGNYLLLSNTYASAG 459
A + R L +L + + N L + ++ AS G
Sbjct: 427 AFYLFRELIKLGLDADQFIVSNILKVCSSLASLG 460
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 136/430 (31%), Positives = 214/430 (49%), Gaps = 41/430 (9%)
Query: 62 SYPRLLFSQVP-SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA 120
S R +F ++P S + +S L+ Y AL L+ MR + T + SA
Sbjct: 177 SDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSA 236
Query: 121 VTNL-TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTE 179
+++L L AH L + D+ D+ T
Sbjct: 237 ISDLGDLSGAESAHVLCIKIGLDL-----------------------------DLHLITA 267
Query: 180 LITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETD 239
LI Y + G ++SAR +FD KD V W M+ YA+ + +E + R ++ M+ +
Sbjct: 268 LIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPN 327
Query: 240 EVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNV 299
T G +S+CA A+ V + E A + ++G+ALVDMY+K G +E+A +
Sbjct: 328 SSTFVGLLSSCAYSEAAFVGRTVADLLEEERI--ALDAILGTALVDMYAKVGLLEKAVEI 385
Query: 300 FRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLE--TEIKPNHVTFVGVLVACTHAG 357
F MK+++ ++++MI G+ HG AR A+ LF +M E +++PN +TF+ VL AC+H G
Sbjct: 386 FNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGG 445
Query: 358 LVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGAL 417
LV +G F M Y P +HY C+ DLLGRAG LE+A +L+ +P+ + W AL
Sbjct: 446 LVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRAL 505
Query: 418 LGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNL- 476
L A V+GN D+ E V L E+ + + +LL+ T+A AG + + L + N
Sbjct: 506 LAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPE-----KSLDNELNKG 560
Query: 477 KKNPGYSWVE 486
+K GYS +E
Sbjct: 561 RKEAGYSAIE 570
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 201/458 (43%), Gaps = 51/458 (11%)
Query: 11 QVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
++++ L +C ++H ++ + L + + ++ LL F + Y +F
Sbjct: 30 KLINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLL-----AFSSVLDIRYASSIFEH 84
Query: 71 VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN---LTLG 127
V + N F+++ +IR Y++ A ++ +R + +T F+F + + +++G
Sbjct: 85 VSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIG 144
Query: 128 TQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARN 187
LH AL GF + N +I Y G + ARKVFDEMPQ
Sbjct: 145 EGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQS--------------- 189
Query: 188 GDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAI 247
D V ++ ++ GY Q + AL+ FR +R++ + + TL +
Sbjct: 190 ---------------VDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFL 234
Query: 248 SACAQLG--ASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE 305
SA + LG + ++ V CI G ++ + +AL+ MY K G + A +F
Sbjct: 235 SAISDLGDLSGAESAHVLCIK----IGLDLDLHLITALIGMYGKTGGISSARRIFDCAIR 290
Query: 306 RNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYL 365
++ T++ MI +A G + L +M ++KPN TFVG+L +C ++ G+ +
Sbjct: 291 KDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTV 350
Query: 366 FSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHG 425
+E + A + D+ + G LEKA+++ M + + W A++ HG
Sbjct: 351 ADLLEE-ERIALDAILGTALVDMYAKVGLLEKAVEIFNRMK-DKDVKSWTAMISGYGAHG 408
Query: 426 NPDVAEIVSRHLFE----LEPNNIGNYLLLSNTYASAG 459
A + + E + PN I +L++ N + G
Sbjct: 409 LAREAVTLFNKMEEENCKVRPNEI-TFLVVLNACSHGG 445
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 133/490 (27%), Positives = 237/490 (48%), Gaps = 46/490 (9%)
Query: 6 RALEWQVVSILNTCT---TLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHS 62
+A ++ S+L +C L+ Q+H + + N + + + LL + +
Sbjct: 110 KANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALL----SLYARCGKME 165
Query: 63 YPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA-- 120
RL F + + ++A+I YT + L+ M + P FTF +L A
Sbjct: 166 EARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASI 225
Query: 121 -VTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTE 179
V L + ++LH A+ LGF ++ +I+
Sbjct: 226 VVKCLEIVSELHGLAIKLGFGR----SSALIR---------------------------S 254
Query: 180 LITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQ-NAMPKEALEFFRCLREAGMET 238
L+ AY + G + +A +L + +D ++ TA++TG++Q N +A + F+ + +
Sbjct: 255 LVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKM 314
Query: 239 DEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYN 298
DEV ++ + C + + + A S +V +G++L+DMY+K G +E+A
Sbjct: 315 DEVVVSSMLKICTTIASVTIGRQIHGFALKSS-QIRFDVALGNSLIDMYAKSGEIEDAVL 373
Query: 299 VFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGL 358
F MKE++ +++S+I G+ HG AI L+ M IKPN VTF+ +L AC+H G
Sbjct: 374 AFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQ 433
Query: 359 VDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMP--VEPNGAVWGA 416
+ G ++ M +G+ +H +C+ D+L R+G+LE+A L+ + V + + WGA
Sbjct: 434 TELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGA 493
Query: 417 LLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDK-N 475
L A HGN ++++ + L +EP NY+ L++ YA+ G WD+ RKLM++ +
Sbjct: 494 FLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGS 553
Query: 476 LKKNPGYSWV 485
K PGYS V
Sbjct: 554 CNKAPGYSLV 563
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 171/396 (43%), Gaps = 40/396 (10%)
Query: 63 YPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT 122
+ R LF ++ + ++A+I ++ G +AL L+ M + + FT+ ++ +
Sbjct: 65 HARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCK 124
Query: 123 NLTL---GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTE 179
+L G Q+H A ++ V + ++ +Y + G ++ AR FD M +RD+VSW
Sbjct: 125 DLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSW-- 182
Query: 180 LITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETD 239
AM+ GY NA + F+ + G + D
Sbjct: 183 -----------------------------NAMIDGYTANACADTSFSLFQLMLTEGKKPD 213
Query: 240 EVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNV 299
T + A + + + +A GFG R+ + +LV+ Y KCG++ A+ +
Sbjct: 214 CFTFGSLLRASIVVKCLEIVSELHGLAIKLGFG--RSSALIRSLVNAYVKCGSLANAWKL 271
Query: 300 FRGMKERNAFTYSSMIVGFAIHGRARA-AIKLFYEMLETEIKPNHVTFVGVLVACTHAGL 358
G K+R+ + +++I GF+ + A +F +M+ + K + V +L CT
Sbjct: 272 HEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIAS 331
Query: 359 VDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALL 418
V G+ + + + D+ ++G +E A+ E M E + W +L+
Sbjct: 332 VTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMK-EKDVRSWTSLI 390
Query: 419 GASHVHGNPDVA-EIVSRHLFE-LEPNNIGNYLLLS 452
HGN + A ++ +R E ++PN++ LLS
Sbjct: 391 AGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLS 426
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 111/223 (49%), Gaps = 33/223 (14%)
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGD 189
+H +++ GF S++ + + +I +Y+K G + ARK+FD + +RDVVSWT +I+ ++R G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 190 MNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISA 249
A LF E+ +D ++ ++ T + +
Sbjct: 94 HPDALLLFKEMHRED-------------------------------VKANQFTYGSVLKS 122
Query: 250 CAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAF 309
C LG K+ + E A N++V SAL+ +Y++CG +EEA F MKER+
Sbjct: 123 CKDLGCLKEGMQIHGSVEKG--NCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLV 180
Query: 310 TYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVA 352
++++MI G+ + A + LF ML KP+ TF +L A
Sbjct: 181 SWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 14/173 (8%)
Query: 272 GPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLF 331
G N+ + L+D+Y K G+V+ A +F + +R+ ++++MI F+ G A+ LF
Sbjct: 42 GFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLF 101
Query: 332 YEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNME--GCYG--VVPSADHYACMAD 387
EM ++K N T+ VL +C G + +G + ++E C G +V SA +
Sbjct: 102 KEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSA-----LLS 156
Query: 388 LLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFEL 440
L R G +E+A ++M E + W A++ + D S LF+L
Sbjct: 157 LYARCGKMEEARLQFDSMK-ERDLVSWNAMIDGYTANACAD----TSFSLFQL 204
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/337 (33%), Positives = 174/337 (51%), Gaps = 20/337 (5%)
Query: 283 LVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPN 342
L++MYS CG EA +VF M E+N T+ +I FA +G AI +F E P+
Sbjct: 295 LLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPD 354
Query: 343 HVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLV 402
F G+ AC G VD+G F +M YG+ PS + Y + ++ G L++AL+ V
Sbjct: 355 GQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFV 414
Query: 403 ETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAG--- 459
E MP+EPN VW L+ S VHGN ++ + + + L+P + N + G
Sbjct: 415 ERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRL-------NKQSREGFIP 467
Query: 460 -RWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLER 518
+ DV + ++LKK G + + EF AGD PE +E+ + L +L
Sbjct: 468 VKASDVEK-------ESLKKRSGI--LHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMH 518
Query: 519 LKAIGYLPNLSSVPYDIGDKEKRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDC 578
+ +GY+ +DI + K LL+ HSE++A A +LN+ ++KNLR+C DC
Sbjct: 519 MVEVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDC 578
Query: 579 HIVMCGASKVTGRKIVVRDNMRFHHFLNGACSCGDFW 615
H + S + GR+++ RD RFH NGAC+C D+W
Sbjct: 579 HNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 2/151 (1%)
Query: 173 DVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLR 232
D+ S L+ Y+ G N A +F+++ K+ W ++ +A+N ++A++ F +
Sbjct: 288 DLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFK 347
Query: 233 EAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGN 292
E G D G AC LG D + + S +G A ++ +LV+MY+ G
Sbjct: 348 EEGNIPDGQLFRGIFYACGMLG-DVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGF 406
Query: 293 VEEAYNVFRGMK-ERNAFTYSSMIVGFAIHG 322
++EA M E N + +++ +HG
Sbjct: 407 LDEALEFVERMPMEPNVDVWETLMNLSRVHG 437
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 142/502 (28%), Positives = 247/502 (49%), Gaps = 32/502 (6%)
Query: 6 RALEWQVVSILNTCTTL---RRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHS 62
RA E+ S++ C L + +H I + H+ + + N L + F + +
Sbjct: 181 RADEFTYPSVIKACAALLDFAYGRVVHGSIEVSS-HRCNLYVCNALISMYKRFGKVDV-- 237
Query: 63 YPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT 122
R LF ++ + ++A+I YT EA +L M + T++ + A
Sbjct: 238 -ARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTI--AGG 294
Query: 123 NLTLGTQLHAHALLLG-------FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR--- 172
L G + A ++G S +N +K G L KVF + R
Sbjct: 295 CLEAGNYIGALNCVVGMRNCNVRIGSVAMING--LKACSHIGALKWG-KVFHCLVIRSCS 351
Query: 173 -----DVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEF 227
D V LIT Y+R D+ A +F +++ W ++++G+A N +E
Sbjct: 352 FSHDIDNVR-NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFL 410
Query: 228 FRCLREAGMETDEVTLAGAISACAQLGASKDADWVRC-IAESSGFGPARNVLVGSALVDM 286
+ + +G + +TLA + A++G + C I + +++ ++LVDM
Sbjct: 411 LKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDC--LILWNSLVDM 468
Query: 287 YSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTF 346
Y+K G + A VF M++R+ TY+S+I G+ G+ A+ F +M + IKP+HVT
Sbjct: 469 YAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTM 528
Query: 347 VGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMP 406
V VL AC+H+ LV +G +LF+ ME +G+ +HY+CM DL RAG+L+KA + T+P
Sbjct: 529 VAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
Query: 407 VEPNGAVWGALLGASHVHGNPDVAEIVS-RHLFELEPNNIGNYLLLSNTYASAGRWDDVS 465
EP+ A+ LL A +HGN ++ E + + L E +P ++G+Y+LL++ YA G W +
Sbjct: 589 YEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLV 648
Query: 466 RVRKLMRDKNLKKNPGYSWVES 487
V+ L+ D ++K ++ +E+
Sbjct: 649 TVKTLLSDLGVQKAHEFALMET 670
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 183/419 (43%), Gaps = 26/419 (6%)
Query: 3 GERRALEWQVVSILNTCTTLRR---AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLP 59
G + + S+L+TC +QLHAH L S ++ L+ T +
Sbjct: 77 GSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLV----TFYSAFN 132
Query: 60 IHSYPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALF- 118
+ + + +P ++ LI +Y F E++ +Y M ++ I FT+ ++
Sbjct: 133 LLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIK 192
Query: 119 --SAVTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVS 176
+A+ + G +H + +++V N +I MY + G +D AR++FD M +RD VS
Sbjct: 193 ACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVS 252
Query: 177 WTELITAYARNGDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLR 232
W +I Y + A +L D + + V W + G + AL +R
Sbjct: 253 WNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMR 312
Query: 233 EAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGN 292
+ V + + AC+ +GA K C+ S V ++L+ MYS+C +
Sbjct: 313 NCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSD 372
Query: 293 VEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVA 352
+ A+ VF+ ++ + T++S+I GFA + R+ L EML + PNH+T +L
Sbjct: 373 LRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPL 432
Query: 353 CTHAGLVDQGQYLFSNMEGCYGVVPSADHYAC------MADLLGRAGHLEKALQLVETM 405
G + G+ CY ++ + C + D+ ++G + A ++ ++M
Sbjct: 433 FARVGNLQHGKEFH-----CY-ILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 142/502 (28%), Positives = 247/502 (49%), Gaps = 32/502 (6%)
Query: 6 RALEWQVVSILNTCTTL---RRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHS 62
RA E+ S++ C L + +H I + H+ + + N L + F + +
Sbjct: 181 RADEFTYPSVIKACAALLDFAYGRVVHGSIEVSS-HRCNLYVCNALISMYKRFGKVDV-- 237
Query: 63 YPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT 122
R LF ++ + ++A+I YT EA +L M + T++ + A
Sbjct: 238 -ARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTI--AGG 294
Query: 123 NLTLGTQLHAHALLLG-------FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR--- 172
L G + A ++G S +N +K G L KVF + R
Sbjct: 295 CLEAGNYIGALNCVVGMRNCNVRIGSVAMING--LKACSHIGALKWG-KVFHCLVIRSCS 351
Query: 173 -----DVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEF 227
D V LIT Y+R D+ A +F +++ W ++++G+A N +E
Sbjct: 352 FSHDIDNVR-NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFL 410
Query: 228 FRCLREAGMETDEVTLAGAISACAQLGASKDADWVRC-IAESSGFGPARNVLVGSALVDM 286
+ + +G + +TLA + A++G + C I + +++ ++LVDM
Sbjct: 411 LKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDC--LILWNSLVDM 468
Query: 287 YSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTF 346
Y+K G + A VF M++R+ TY+S+I G+ G+ A+ F +M + IKP+HVT
Sbjct: 469 YAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTM 528
Query: 347 VGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMP 406
V VL AC+H+ LV +G +LF+ ME +G+ +HY+CM DL RAG+L+KA + T+P
Sbjct: 529 VAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
Query: 407 VEPNGAVWGALLGASHVHGNPDVAEIVS-RHLFELEPNNIGNYLLLSNTYASAGRWDDVS 465
EP+ A+ LL A +HGN ++ E + + L E +P ++G+Y+LL++ YA G W +
Sbjct: 589 YEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLV 648
Query: 466 RVRKLMRDKNLKKNPGYSWVES 487
V+ L+ D ++K ++ +E+
Sbjct: 649 TVKTLLSDLGVQKAHEFALMET 670
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 183/419 (43%), Gaps = 26/419 (6%)
Query: 3 GERRALEWQVVSILNTCTTLRR---AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLP 59
G + + S+L+TC +QLHAH L S ++ L+ T +
Sbjct: 77 GSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLV----TFYSAFN 132
Query: 60 IHSYPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALF- 118
+ + + +P ++ LI +Y F E++ +Y M ++ I FT+ ++
Sbjct: 133 LLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIK 192
Query: 119 --SAVTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVS 176
+A+ + G +H + +++V N +I MY + G +D AR++FD M +RD VS
Sbjct: 193 ACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVS 252
Query: 177 WTELITAYARNGDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLR 232
W +I Y + A +L D + + V W + G + AL +R
Sbjct: 253 WNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMR 312
Query: 233 EAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGN 292
+ V + + AC+ +GA K C+ S V ++L+ MYS+C +
Sbjct: 313 NCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSD 372
Query: 293 VEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVA 352
+ A+ VF+ ++ + T++S+I GFA + R+ L EML + PNH+T +L
Sbjct: 373 LRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPL 432
Query: 353 CTHAGLVDQGQYLFSNMEGCYGVVPSADHYAC------MADLLGRAGHLEKALQLVETM 405
G + G+ CY ++ + C + D+ ++G + A ++ ++M
Sbjct: 433 FARVGNLQHGKEFH-----CY-ILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 128/399 (32%), Positives = 199/399 (49%), Gaps = 29/399 (7%)
Query: 222 KEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWV-RCIAESSGFGPARNVLVG 280
K+A+E + R G D L C A ++A V I S G ++
Sbjct: 163 KKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGIS---DISAY 219
Query: 281 SALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIK 340
+++++MYS CG+VE+A VF M ERN T+ +I FA +G+ AI F + K
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNK 279
Query: 341 PNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQ 400
P+ F + AC G +++G F +M YG++P +HY + +L G+L++AL+
Sbjct: 280 PDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALR 339
Query: 401 LVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAG- 459
VE+M EPN +W L+ S VHG+ + + + +L+ + + N + AG
Sbjct: 340 FVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRL-------NKESKAGL 390
Query: 460 ---RWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLL 516
+ D+ + KL R + K P Y I AGD+ PE E+ AL L
Sbjct: 391 VPVKSSDLVK-EKLQR---MAKGPNYG--------IRYMAAGDISRPENRELYMALKSLK 438
Query: 517 ERLKAIGYLPNLSSVPYDIGDKEKRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICE 576
E + IGY+P +D+ + K L H+E+ A L+T A S I++MKNLR+C
Sbjct: 439 EHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCA 498
Query: 577 DCHIVMCGASKVTGRKIVVRDNMRFHHFLNGACSCGDFW 615
DCH + SK+ GR+++ RD RFHH +G CSC ++W
Sbjct: 499 DCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/495 (28%), Positives = 233/495 (47%), Gaps = 83/495 (16%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT- 125
LF ++P + ++ + ++ G + L L+ + S TF+ + A + L+
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSY 99
Query: 126 --LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
G Q+HA + G + +I MY K G L + +VF+ + ++D+VSW L++
Sbjct: 100 PETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSG 159
Query: 184 YARNGDMNSARELF-----DELDVKD---------------------------------K 205
+ RNG A +F + +++ +
Sbjct: 160 FLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLV 219
Query: 206 VAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQ------------- 252
V TAM++ Y+ + EA++ + L + TDEV L IS C +
Sbjct: 220 VLGTAMISFYSSVGLINEAMKVYNSL---NVHTDEVMLNSLISGCIRNRNYKEAFLLMSR 276
Query: 253 ------------LGASKDAD-WV----RCIAESSGFGPARNVLVGSALVDMYSKCGNVEE 295
G S ++D W+ C+A +GF + G L+DMY KCG + +
Sbjct: 277 QRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNG--LMDMYGKCGQIVQ 334
Query: 296 AYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLE--TEIKPNHVTFVGVLVAC 353
A +FR + ++ +++SMI +A++G A+++F EM E + + PN VTF+ V+ AC
Sbjct: 335 ARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISAC 394
Query: 354 THAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNG-- 411
HAGLV +G+ F M+ Y +VP +HY C D+L +AG E+ +LVE M N
Sbjct: 395 AHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSI 454
Query: 412 --AVWGALLGASHVHGNPDVAEIVSRHLF-ELEPNNIGNYLLLSNTYASAGRWDDVSRVR 468
A+W A+L A ++ + E V+R L E P N Y+L+SN YA+ G+WD V +R
Sbjct: 455 PCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELR 514
Query: 469 KLMRDKNLKKNPGYS 483
+++K L K G+S
Sbjct: 515 GKLKNKGLVKTAGHS 529
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 206/422 (48%), Gaps = 48/422 (11%)
Query: 68 FSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV---TNL 124
F ++P + ++AL + YT G +A +Y +M+ + P S T + ++
Sbjct: 459 FERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDY 518
Query: 125 TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAY 184
G+ ++ + GF S+ V + +I M+ K L +A +FD+
Sbjct: 519 ARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCG-------------- 564
Query: 185 ARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLA 244
F+ K V+W M+ GY + +EA+ FR ++ + + VT
Sbjct: 565 ------------FE----KSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFV 608
Query: 245 GAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK 304
+ A A+L A + V GF VG++LVDMY+KCG +E + F +
Sbjct: 609 NIVRAAAELSALRVGMSVHSSLIQCGF--CSQTPVGNSLVDMYAKCGMIESSEKCFIEIS 666
Query: 305 ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQY 364
+ ++++M+ +A HG A A+ LF M E E+KP+ V+F+ VL AC HAGLV++G+
Sbjct: 667 NKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKR 726
Query: 365 LFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVH 424
+F M + + +HYACM DLLG+AG +A++++ M V+ + VWGALL +S +H
Sbjct: 727 IFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMH 786
Query: 425 GNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSW 484
N ++ L +LEP N +Y + G ++VSR++K+ P SW
Sbjct: 787 CNLWLSNAALCQLVKLEPLNPSHY----SQDRRLGEVNNVSRIKKV---------PACSW 833
Query: 485 VE 486
+E
Sbjct: 834 IE 835
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 196/445 (44%), Gaps = 67/445 (15%)
Query: 15 ILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRH--LTTTFPHLPIHSYPRLLFSQVP 72
+L C R Q+H S I++ L H L + R++F V
Sbjct: 11 MLRECKNFRCLLQVHG----------SLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVR 60
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQR-ITPISFTFS-ALFSAVTNLTLGTQL 130
P L++++IR YT G EAL + M ++ I P ++F+ AL + ++ L
Sbjct: 61 DPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGL 120
Query: 131 HAHALL--LGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNG 188
H L+ +G SD+++ +++MY K+ RD+VS
Sbjct: 121 RIHDLIAEMGLESDVYIGTALVEMYCKA---------------RDLVS------------ 153
Query: 189 DMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAIS 248
AR++FD++ VKD V W MV+G AQN AL F +R ++ D V+L I
Sbjct: 154 ----ARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIP 209
Query: 249 ACAQLGASKDADWVRC---IAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE 305
A ++L + +D RC + GF A S L+DMY C ++ A +VF +
Sbjct: 210 AVSKL---EKSDVCRCLHGLVIKKGFIFA----FSSGLIDMYCNCADLYAAESVFEEVWR 262
Query: 306 RNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYL 365
++ ++ +M+ +A +G ++LF M +++ N V L A + G + +G +
Sbjct: 263 KDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAI 322
Query: 366 --FSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAV-WGALLGASH 422
++ +G G V A + + + G LE A QL + +E V W A++ +
Sbjct: 323 HDYAVQQGLIGDVSVATS---LMSMYSKCGELEIAEQLF--INIEDRDVVSWSAMIASYE 377
Query: 423 VHGNPDVAEIVSRHLFE--LEPNNI 445
G D A + R + ++PN +
Sbjct: 378 QAGQHDEAISLFRDMMRIHIKPNAV 402
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 160/384 (41%), Gaps = 39/384 (10%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQ--RITPISFTFSALFSA-VTN 123
+F +V + + ++ AY G F E L L+ MRN R+ ++ + +A V +
Sbjct: 256 VFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGD 315
Query: 124 LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
L G +H +A+ G D+ V T L++
Sbjct: 316 LVKGIAIHDYAVQQGLIGDVSVA-------------------------------TSLMSM 344
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
Y++ G++ A +LF ++ +D V+W+AM+ Y Q EA+ FR + ++ + VTL
Sbjct: 345 YSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTL 404
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
+ CA + AS+ + C A + + +A++ MY+KCG A F +
Sbjct: 405 TSVLQGCAGVAASRLGKSIHCYAIKADI--ESELETATAVISMYAKCGRFSPALKAFERL 462
Query: 304 KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQ 363
++A ++++ G+ G A A ++ M + P+ T VG+L C +G
Sbjct: 463 PIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGS 522
Query: 364 YLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHV 423
++ + +G + ++ + L A+ L + E + W ++ +
Sbjct: 523 CVYGQIIK-HGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLL 581
Query: 424 HGNPDVAEIVSRHLF--ELEPNNI 445
HG + A R + + +PN +
Sbjct: 582 HGQAEEAVATFRQMKVEKFQPNAV 605
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 197/401 (49%), Gaps = 40/401 (9%)
Query: 217 QNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGF--GPA 274
Q + K+A+E L + G D +CA L + + + V S F P
Sbjct: 217 QRRLYKDAIE----LLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPK 272
Query: 275 RNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEM 334
N +V + M+ +C ++ +A VF M +++ ++ M+ ++ +G A+ LF EM
Sbjct: 273 LNNMV----ISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEM 328
Query: 335 LETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGH 394
+ +KPN TF+ V +AC G +++ F +M+ +G+ P +HY + +LG+ GH
Sbjct: 329 TKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGH 388
Query: 395 LEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNT 454
L +A Q + +P EP W A+ + +HG+ D+ + + + +++P+ + +
Sbjct: 389 LVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKAVINKIPTPP 448
Query: 455 YASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDD 514
S + V+ +++ +NL F + K
Sbjct: 449 PKSFKETNMVTSKSRILEFRNLT-----------------FYKDEAKE------------ 479
Query: 515 LLERLKAIGYLPNLSSVPYDIGDKEKRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRI 574
+ K + Y+P+ V +DI + K L+ HSE+LA+A+G++ T T+ I+KNLR+
Sbjct: 480 -MAAKKGVVYVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRV 538
Query: 575 CEDCHIVMCGASKVTGRKIVVRDNMRFHHFLNGACSCGDFW 615
C DCH + SK+ GR ++VRDN RFHHF +G CSCGD+W
Sbjct: 539 CGDCHNFIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 97/239 (40%), Gaps = 40/239 (16%)
Query: 109 PISFTFSALFSAVTNLTL---GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKV 165
P F LF + NL ++H H L F D +NN +I M+ + + A++V
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRV 293
Query: 166 FDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEAL 225
FD M +D+ SW ++ AY+ NG M +AL
Sbjct: 294 FDHMVDKDMDSWHLMMCAYSDNG-------------------------------MGDDAL 322
Query: 226 EFFRCLREAGMETDEVTLAGAISACAQLGASKDADW-VRCIAESSGFGPARNVLVGSALV 284
F + + G++ +E T ACA +G ++A + G P +G ++
Sbjct: 323 HLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLG--VL 380
Query: 285 DMYSKCGNVEEAYNVFRGMK-ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPN 342
+ KCG++ EA R + E A + +M +HG ++ + E L ++ P+
Sbjct: 381 GVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHG--DIDLEDYMEELMVDVDPS 437
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 126/397 (31%), Positives = 188/397 (47%), Gaps = 25/397 (6%)
Query: 222 KEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWV-RCIAESSGFGPARNVLVG 280
+EA+E L G D + L G C + A + A V CI + P +V
Sbjct: 101 REAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECII--ALVSPC-DVGAR 157
Query: 281 SALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIK 340
+A+++MYS C +V++A VF M E N+ T M+ F +G AI LF E K
Sbjct: 158 NAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNK 217
Query: 341 PNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQ 400
PN F V CT G V +G F M YG+VPS +HY + +L +GHL++AL
Sbjct: 218 PNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALN 277
Query: 401 LVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGR 460
VE MP+EP+ VW L+ S VHG+ ++ + + + +L+ A R
Sbjct: 278 FVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLD----------------ATR 321
Query: 461 WDDVSRVRKLMRDKN--LKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLER 518
D VS + + +KK P S F D HP++N I + L L +
Sbjct: 322 LDKVSSAGLVATKASDFVKKEPS---TRSEPYFYSTFRPVDSSHPQMNIIYETLMSLRSQ 378
Query: 519 LKAIGYLPNLSSVPYDIGDKEKRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDC 578
LK +GY+P+ I E + + + E++A+ LL + S I ++ N+RI DC
Sbjct: 379 LKEMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRIVGDC 438
Query: 579 HIVMCGASKVTGRKIVVRDNMRFHHFLNGACSCGDFW 615
H +M S +TGR ++ RD +H F NG C C + W
Sbjct: 439 HDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 185/345 (53%), Gaps = 14/345 (4%)
Query: 175 VSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREA 234
V+ + LI AY ++ A + D + KD V+ + M++G A EA+ F +R+
Sbjct: 364 VALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT 423
Query: 235 GMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVE 294
++L A S A L SK W IA ++ VG+++VD Y+KCG +E
Sbjct: 424 PNAITVISLLNACSVSADLRTSK---WAHGIAIRRSLA-INDISVGTSIVDAYAKCGAIE 479
Query: 295 EAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACT 354
A F + E+N +++ +I +AI+G A+ LF EM + PN VT++ L AC
Sbjct: 480 MARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACN 539
Query: 355 HAGLVDQGQYLFSNM-EGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMP--VEPNG 411
H GLV +G +F +M E + PS HY+C+ D+L RAG ++ A++L++ +P V+
Sbjct: 540 HGGLVKKGLMIFKSMVEEDHK--PSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGA 597
Query: 412 AVWGALL-GASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKL 470
+ WGA+L G + + V + ELEP YLL S+T+A+ W+DV+ +R+L
Sbjct: 598 SAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRL 657
Query: 471 MRDKNLKKNPGYSWVESRNGVIHEFLAGD---VKHPEINEIKKAL 512
++++ ++ GYS V N + FLAGD E+N++ ++L
Sbjct: 658 VKERKVRVVAGYSMVREGN-LAKRFLAGDKLSQSDSELNDVVQSL 701
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 163/371 (43%), Gaps = 42/371 (11%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQ-RITPISFTFSALFSAVT- 122
R LF ++ + +S +IR+Y L+L+ M ++ + P T +++ A T
Sbjct: 179 RKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTV 238
Query: 123 --NLTLGTQLHAHALLLGF-ASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTE 179
++ +G +H ++ GF +D+FV N++I MY
Sbjct: 239 MEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMY-------------------------- 272
Query: 180 LITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETD 239
++ D++SA +FDE ++ V+W +++ G+ N EALE F + + +E D
Sbjct: 273 -----SKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVD 327
Query: 240 EVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNV 299
EVT+ + C + + G+ N + S+L+D Y+ C V++A V
Sbjct: 328 EVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGY--ESNEVALSSLIDAYTSCSLVDDAGTV 385
Query: 300 FRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLV 359
M ++ + S+MI G A GR+ AI +F M +T PN +T + +L AC+ + +
Sbjct: 386 LDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADL 442
Query: 360 DQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLG 419
++ + + D + G +E A + + + E N W ++
Sbjct: 443 RTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQI-TEKNIISWTVIIS 501
Query: 420 ASHVHGNPDVA 430
A ++G PD A
Sbjct: 502 AYAINGLPDKA 512
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 199/472 (42%), Gaps = 92/472 (19%)
Query: 94 EALRLYTSMRNQRITPISFTFSALFSAVTNLTL-GTQLHAHALLLGFASDIFVNNTMIKM 152
E L ++ +R P + T + A +L G ++H + + GF V N+++ M
Sbjct: 110 EGLWWFSKLRVWGFEPNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCM 169
Query: 153 YVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMV 212
Y S L SARK+FDEM +RDV+SW+ +I +Y ++ + +LF E+
Sbjct: 170 YADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEM------------ 216
Query: 213 TGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESS--- 269
+ EA E D VT+ + AC + +D D R + S
Sbjct: 217 ------------------VHEAKTEPDCVTVTSVLKACTVM---EDIDVGRSVHGFSIRR 255
Query: 270 GFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIK 329
GF A +V V ++L+DMYSK +V+ A+ VF RN +++S++ GF + R A++
Sbjct: 256 GFDLA-DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALE 314
Query: 330 LFYEMLETEIKPNHVTFVGVLVAC-----------THAGLVDQG----QYLFSNMEGCY- 373
+F+ M++ ++ + VT V +L C H ++ +G + S++ Y
Sbjct: 315 MFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYT 374
Query: 374 --------GVVPSADHY------ACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLG 419
G V + Y + M L AG ++A+ + M PN +LL
Sbjct: 375 SCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLN 434
Query: 420 ASHVHGNPDVAE----IVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKN 475
A V + ++ I R + ++G ++ + YA G + R + +KN
Sbjct: 435 ACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIV--DAYAKCGAIEMARRTFDQITEKN 492
Query: 476 LKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPN 527
+ SW VI + IN + L + +K GY PN
Sbjct: 493 I-----ISWT-----VI-------ISAYAINGLPDKALALFDEMKQKGYTPN 527
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 16/246 (6%)
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
Y + GD+ S FD ++ +D V+W +V G +E L +F LR G E + TL
Sbjct: 71 YMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTL 130
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
I AC L D + + SGF + V ++++ MY+ ++ A +F M
Sbjct: 131 VLVIHACRSLWF--DGEKIHGYVIRSGFCGISS--VQNSILCMYADSDSL-SARKLFDEM 185
Query: 304 KERNAFTYSSMIVGFAIHGRARAAIKLFYEML-ETEIKPNHVTFVGVLVACTHAGLVDQG 362
ER+ ++S +I + +KLF EM+ E + +P+ VT VL ACT +D G
Sbjct: 186 SERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVG 245
Query: 363 QYL--FSNMEGCYGVVPSADHYAC--MADLLGRAGHLEKALQLVETMPVEPNGAVWGALL 418
+ + FS G AD + C + D+ + ++ A ++ + N W ++L
Sbjct: 246 RSVHGFSIRRG----FDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCR-NIVSWNSIL 300
Query: 419 GASHVH 424
A VH
Sbjct: 301 -AGFVH 305
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 123/301 (40%), Gaps = 41/301 (13%)
Query: 9 EWQVVSILNTCTTLRR---AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPR 65
E VVS+L C + K +H I R + +++L+ T+ +
Sbjct: 328 EVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSC----SLVDDAG 383
Query: 66 LLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT-NL 124
+ + + S +I G EA+ ++ MR+ TP + T +L +A + +
Sbjct: 384 TVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD---TPNAITVISLLNACSVSA 440
Query: 125 TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAY 184
L T AH + + R+ + D+ T ++ AY
Sbjct: 441 DLRTSKWAHGIAI-------------------------RR---SLAINDISVGTSIVDAY 472
Query: 185 ARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLA 244
A+ G + AR FD++ K+ ++WT +++ YA N +P +AL F +++ G + VT
Sbjct: 473 AKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYL 532
Query: 245 GAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK 304
A+SAC G K + P+ S +VDM S+ G ++ A + + +
Sbjct: 533 AALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHY--SCIVDMLSRAGEIDTAVELIKNLP 590
Query: 305 E 305
E
Sbjct: 591 E 591
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 221/472 (46%), Gaps = 44/472 (9%)
Query: 25 AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIR 84
KQLH+ + + + S+ + N+L + L S F+ VP + +++++
Sbjct: 232 GKQLHSLVVKSGWNISNIFVANVLVDYYSACGDL---SGSMRSFNAVPEKDVISWNSIVS 288
Query: 85 AYTLRGPFTEALRLYTSM----RNQRITPISFTFSALFSAVTNLTLGTQLHAHALLLGF- 139
G ++L L++ M + I P +F S +++ G Q+H + L +GF
Sbjct: 289 VCADYGSVLDSLDLFSKMQFWGKRPSIRPF-MSFLNFCSRNSDIQSGKQIHCYVLKMGFD 347
Query: 140 ASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDE 199
S + V + +I MY K ++++ ++ +P ++ L+T+ G
Sbjct: 348 VSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCG----------- 396
Query: 200 LDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACA-QLGAS-K 257
+ K+ +E F + + G DEVTL+ + A + L S
Sbjct: 397 --------------------ITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLH 436
Query: 258 DADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVG 317
V C A SG+ A +V V +L+D Y+K G E + VF + N F +S+I G
Sbjct: 437 SCTLVHCCAIKSGY--AADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIING 494
Query: 318 FAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVP 377
+A +G +K+ EM + P+ VT + VL C+H+GLV++G+ +F ++E YG+ P
Sbjct: 495 YARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISP 554
Query: 378 SADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHL 437
YACM DLLGRAG +EKA +L+ + + W +LL + +H N + + L
Sbjct: 555 GRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVL 614
Query: 438 FELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRN 489
LEP N Y+ +S Y G ++ ++R++ + L + GYS V +N
Sbjct: 615 MNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSVVVKN 666
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 148/347 (42%), Gaps = 45/347 (12%)
Query: 68 FSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL- 126
F ++ + Y+ LI + G A+ LY M + + + TF ++ S ++
Sbjct: 69 FDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFC 128
Query: 127 --GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAY 184
G Q+H + LGF ++FV + ++ +Y +D A K+FDEM R++ L+ +
Sbjct: 129 REGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCF 188
Query: 185 ARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLA 244
+ G+ E++ ++++ G A+N + T
Sbjct: 189 CQTGESKRLFEVYLRMELE----------GVAKNGL---------------------TYC 217
Query: 245 GAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK 304
I C+ + + + SG+ + N+ V + LVD YS CG++ + F +
Sbjct: 218 YMIRGCSHDRLVYEGKQLHSLVVKSGWNIS-NIFVANVLVDYYSACGDLSGSMRSFNAVP 276
Query: 305 ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQY 364
E++ +++S++ A +G ++ LF +M +P+ F+ L C+ + G+
Sbjct: 277 EKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQ 336
Query: 365 LFSNMEGCYGV-----VPSADHYACMADLLGRAGHLEKALQLVETMP 406
+ CY + V S + + D+ G+ +E + L +++P
Sbjct: 337 IH-----CYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLP 378
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 106/232 (45%), Gaps = 9/232 (3%)
Query: 166 FDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEAL 225
+E P V + I ++G++ SA E FDE+ V+D V + +++G ++ A+
Sbjct: 38 LEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAI 97
Query: 226 EFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVD 285
E + + G+ T +S C+ ++ V C S GFG N+ V SALV
Sbjct: 98 ELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGC--NMFVRSALVG 155
Query: 286 MYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVT 345
+Y+ V+ A +F M +RN + ++ F G ++ +++ M + N +T
Sbjct: 156 LYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLT 215
Query: 346 FVGVLVACTHAGLVDQGQYLFS-------NMEGCYGVVPSADHYACMADLLG 390
+ ++ C+H LV +G+ L S N+ + D+Y+ DL G
Sbjct: 216 YCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSG 267
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 233/492 (47%), Gaps = 41/492 (8%)
Query: 4 ERRALEWQVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSY 63
E R E+ + + T +R +Q+H + + + + ++ N + + + L + Y
Sbjct: 131 EIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDM---YRRLGVFDY 187
Query: 64 PRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN 123
+F + + ++ LI + + G AL + MR I P +T S + S ++
Sbjct: 188 ALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSD 247
Query: 124 L---TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTEL 180
L + G Q A + +GF S+ V I M+ K LD + K
Sbjct: 248 LRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVK---------------- 291
Query: 181 ITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
LF EL+ D V +M+ Y+ + ++AL F + D+
Sbjct: 292 ---------------LFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDK 336
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
T + +S+ + AD V + GF + V ++L++MY K G+V+ A VF
Sbjct: 337 FTFSSVLSSMNAVMLDHGAD-VHSLVIKLGFD--LDTAVATSLMEMYFKTGSVDLAMGVF 393
Query: 301 RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETE-IKPNHVTFVGVLVACTHAGLV 359
++ ++++I+G A + RA ++ +F ++L + +KP+ VT +G+LVAC +AG V
Sbjct: 394 AKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFV 453
Query: 360 DQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLG 419
++G +FS+ME +GV P +HYAC+ +LL R G + +A + + +P EP+ +W +L
Sbjct: 454 NEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILC 513
Query: 420 ASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKN 479
AS G+ +AE V++ + E EP + YL+L Y RW++ ++R M + LK
Sbjct: 514 ASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSA 573
Query: 480 PGYSWVESRNGV 491
G S + + V
Sbjct: 574 QGSSKISIESSV 585
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 140/297 (47%), Gaps = 35/297 (11%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL 126
LF ++P + ++ +I G +R++ M+ I P FTFS L S VT +
Sbjct: 92 LFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRH 151
Query: 127 GTQLHAHALLLGFAS-DIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYA 185
G Q+H +A+ G + ++ V N+++ MY + G D A VF M RDVVSW LI + +
Sbjct: 152 GEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCS 211
Query: 186 RNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
+G+ + AL+ F +RE ++ DE T++
Sbjct: 212 DSGN-------------------------------KEVALDQFWLMREMEIQPDEYTVSM 240
Query: 246 AISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE 305
+S C+ L + GF N +V A +DM+SKC ++++ +FR +++
Sbjct: 241 VVSICSDLRELSKGKQALALCIKMGF--LSNSIVLGAGIDMFSKCNRLDDSVKLFRELEK 298
Query: 306 RNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQG 362
++ +SMI ++ H A++LF + ++P+ TF VL + +A ++D G
Sbjct: 299 WDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVL-SSMNAVMLDHG 354
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 124/241 (51%), Gaps = 8/241 (3%)
Query: 125 TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAY 184
TL +HA L GF + N +++Y KSG + +A ++FD++P ++ ++W +
Sbjct: 21 TLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGL 80
Query: 185 ARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLA 244
+NG +N+A +LFDE+ +D V+W M++G + + F ++ + E T +
Sbjct: 81 FKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFS 140
Query: 245 --GAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
++ C + G + A SG N++V ++++DMY + G + A +VF
Sbjct: 141 ILASLVTCVRHGEQIHGN-----AICSGVS-RYNLVVWNSVMDMYRRLGVFDYALSVFLT 194
Query: 303 MKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQG 362
M++R+ +++ +I+ + G A+ F+ M E EI+P+ T V+ C+ + +G
Sbjct: 195 MEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKG 254
Query: 363 Q 363
+
Sbjct: 255 K 255
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 176/356 (49%), Gaps = 7/356 (1%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLR-GPFTEALRLYTSMRNQRITPISFTFSALFSAVTN 123
RL F + N ++AL+ Y + GP L L+ M P +TFS +
Sbjct: 371 RLCFDYIRDKNIVCWNALLSGYANKDGPI--CLSLFLQMLQMGFRPTEYTFSTALKSCCV 428
Query: 124 LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFD-EMPQRDVVSWTELIT 182
L QLH+ + +G+ + +V +++++ Y K+ ++ A + D VV +
Sbjct: 429 TEL-QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAG 487
Query: 183 AYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
Y+R G + + +L L+ D V+W + +++ +E +E F+ + ++ + D+ T
Sbjct: 488 IYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYT 547
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
+S C++L + + + F A + V + L+DMY KCG++ VF
Sbjct: 548 FVSILSLCSKLCDLTLGSSIHGLITKTDFSCA-DTFVCNVLIDMYGKCGSIRSVMKVFEE 606
Query: 303 MKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQG 362
+E+N T++++I IHG + A++ F E L KP+ V+F+ +L AC H G+V +G
Sbjct: 607 TREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEG 666
Query: 363 QYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALL 418
LF M+ YGV P DHY C DLL R G+L++A L+ MP + VW L
Sbjct: 667 MGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFL 721
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 176/420 (41%), Gaps = 52/420 (12%)
Query: 11 QVVSILNTC---TTLRRAKQLHAH--IYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPR 65
+VVS+LN C + R K LHA L Q Y+ N++ + + L S
Sbjct: 14 RVVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNII----SLYEKLGEVSLAG 69
Query: 66 LLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT-NL 124
+F Q+P N ++ +I+ Y+ G +A +++ MR P T S L S + ++
Sbjct: 70 KVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDV 129
Query: 125 TLGTQLHAHALLLG-FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITA 183
GTQLH +L G F +D FV ++ +Y + L+ A +VF++MP + + +W +++
Sbjct: 130 RAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSL 189
Query: 184 YARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
G + KE + FFR L G E +
Sbjct: 190 LGHRGFL-------------------------------KECMFFFRELVRMGASLTESSF 218
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
G + + + + + C A G +V+ ++L+ Y KCGN A +F+
Sbjct: 219 LGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVV--NSLISAYGKCGNTHMAERMFQDA 276
Query: 304 KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQ 363
+ +++++I A A+KLF M E PN T+V VL + L+ G+
Sbjct: 277 GSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGR 336
Query: 364 YLFSNM--EGC-YGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGA 420
+ + GC G+V + D + G+LE + +L + N W ALL
Sbjct: 337 QIHGMLIKNGCETGIVLG----NALIDFYAKCGNLEDS-RLCFDYIRDKNIVCWNALLSG 391
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 174/415 (41%), Gaps = 36/415 (8%)
Query: 25 AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIR 84
+KQLH + L ++ +L+ + + +F S + ++A+I
Sbjct: 234 SKQLHCSATKKGLDCEISVVNSLI----SAYGKCGNTHMAERMFQDAGSWDIVSWNAIIC 289
Query: 85 AYTLRGPFTEALRLYTSMRNQRITPISFTFSALF---SAVTNLTLGTQLHAHALLLGFAS 141
A +AL+L+ SM +P T+ ++ S V L+ G Q+H + G +
Sbjct: 290 ATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCET 349
Query: 142 DIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELD 201
I + N +I Y K G L+ +R FD + +++V W L++ YA N D LF ++
Sbjct: 350 GIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQML 408
Query: 202 VKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDA-- 259
+ ++ E + + G E ++ L+ + + A+ DA
Sbjct: 409 QMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALL 468
Query: 260 --DWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVG 317
DW GP +V+ + + +YS+ G E+ + +++ + +++ I
Sbjct: 469 LLDWAS--------GPT-SVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAA 519
Query: 318 FAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVV- 376
+ I+LF ML++ I+P+ TFV +L C+ + G + +G++
Sbjct: 520 CSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSI-------HGLIT 572
Query: 377 ----PSADHYAC--MADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHG 425
AD + C + D+ G+ G + +++ E E N W AL+ +HG
Sbjct: 573 KTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETR-EKNLITWTALISCLGIHG 626
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 182/345 (52%), Gaps = 15/345 (4%)
Query: 51 LTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPI 110
+ T F + R F ++P + ++A++ Y G +ALRL+ M + P
Sbjct: 204 MITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPN 263
Query: 111 SFTFSALFSAVTNLTLGTQLHAHALLLGFAS---DIFVNNTMIKMYVKSGCLDSARKVFD 167
T+ + SA + + + L+ + FV ++ M+ K + SAR++F+
Sbjct: 264 ETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFN 323
Query: 168 EM-PQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALE 226
E+ QR++V+W +I+ Y R GDM+SAR+LFD + ++ V+W +++ GYA N A+E
Sbjct: 324 ELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIE 383
Query: 227 FFRCLREAG-METDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVG-SALV 284
FF + + G + DEVT+ +SAC + + D CI + + G +L+
Sbjct: 384 FFEDMIDYGDSKPDEVTMISVLSACGHMADLELGD---CIVDYIRKNQIKLNDSGYRSLI 440
Query: 285 DMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHV 344
MY++ GN+ EA VF MKER+ +Y+++ FA +G + L +M + I+P+ V
Sbjct: 441 FMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRV 500
Query: 345 TFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLL 389
T+ VL AC AGL+ +GQ +F ++ P ADHYACM DLL
Sbjct: 501 TYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYACM-DLL 539
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 135/533 (25%), Positives = 237/533 (44%), Gaps = 73/533 (13%)
Query: 6 RALEWQVVSILNTCTTLRRAKQLHAHIYRHN-LHQSSYIITNLLRHLTTTFPHLPIHSYP 64
R L + +I + T + Q+HA + N L + SY + ++ T P + Y
Sbjct: 3 RELTVSLAAIASQALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRL--RAPSY-YT 59
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL 124
RL+F V PN F+ +++ + ++ + LRLY I P +F+F + +
Sbjct: 60 RLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRF 119
Query: 125 TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAY 184
G A LGF D +V N ++ MYVK ++SARKVFD++ QR W +I+ Y
Sbjct: 120 --GILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGY 177
Query: 185 ARNGDMNSARELFDELDVKDKVAWTAMVT------------------------------- 213
+ G+ A +LFD + D V+WT M+T
Sbjct: 178 WKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLS 237
Query: 214 GYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACA---------QLGASKDADWVR- 263
GYAQN ++AL F + G+ +E T ISAC+ L D VR
Sbjct: 238 GYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRL 297
Query: 264 -CIAESS-------------------GFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
C +++ G RN++ +A++ Y++ G++ A +F M
Sbjct: 298 NCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTM 357
Query: 304 KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLET-EIKPNHVTFVGVLVACTHAGLVDQG 362
+RN +++S+I G+A +G+A AI+ F +M++ + KP+ VT + VL AC H ++ G
Sbjct: 358 PKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELG 417
Query: 363 QYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASH 422
+ + + + Y + + R G+L +A ++ + M E + + L A
Sbjct: 418 DCIVDYIRK-NQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK-ERDVVSYNTLFTAFA 475
Query: 423 VHGNP-DVAEIVSRHLFE-LEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRD 473
+G+ + ++S+ E +EP+ + Y + AG + R+ K +R+
Sbjct: 476 ANGDGVETLNLLSKMKDEGIEPDRV-TYTSVLTACNRAGLLKEGQRIFKSIRN 527
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 190/369 (51%), Gaps = 22/369 (5%)
Query: 6 RALEWQVVSILNTC---TTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHS 62
RA E +L +C LR +QLH + ++ + +L + + + S
Sbjct: 159 RATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGN----VDLETSIVDVYGKCRVMS 214
Query: 63 YPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT 122
R +F ++ +P+ ++ ++R Y G EA+ ++ M + P++ T S++ A +
Sbjct: 215 DARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACS 274
Query: 123 N---LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTE 179
L +G +HA A+ L +D V+ ++ MYVK L+SAR+VFD+ +D+ SWT
Sbjct: 275 RSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTS 334
Query: 180 LITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETD 239
++ YA +G ARELFD + ++ V+W AM+ GY EAL+F +R+ D
Sbjct: 335 AMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENID 394
Query: 240 EVTLAGAISACAQLGASKDADWVRCIAESSGF----GPARNVLVGSALVDMYSKCGNVEE 295
VTL ++ C+ + V+ ++ GF G NV+V +AL+DMY KCG ++
Sbjct: 395 NVTLVWILNVCSGISD------VQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQS 448
Query: 296 AYNVFRGMKE-RNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACT 354
A FR M E R+ ++++++ G A GR+ A+ F+E ++ E KP+ T +L C
Sbjct: 449 ANIWFRQMSELRDEVSWNALLTGVARVGRSEQALS-FFEGMQVEAKPSKYTLATLLAGCA 507
Query: 355 HAGLVDQGQ 363
+ ++ G+
Sbjct: 508 NIPALNLGK 516
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 165/348 (47%), Gaps = 36/348 (10%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALF---SAV 121
R LF +P N ++A++ Y + EAL T MR + + T + S +
Sbjct: 349 RELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGI 408
Query: 122 TNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
+++ +G Q H G+ +++ V N ++ MY K G L SA F +M +
Sbjct: 409 SDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSE---------- 458
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
++D+V+W A++TG A+ ++AL FF + + + +
Sbjct: 459 --------------------LRDEVSWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKY 497
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
TLA ++ CA + A + G+ +V++ A+VDMYSKC + A VF+
Sbjct: 498 TLATLLAGCANIPALNLGKAIHGFLIRDGYKI--DVVIRGAMVDMYSKCRCFDYAIEVFK 555
Query: 302 GMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
R+ ++S+I G +GR++ +LF + +KP+HVTF+G+L AC G V+
Sbjct: 556 EAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVEL 615
Query: 362 GQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEP 409
G FS+M Y + P +HY CM +L + G L + + + MP +P
Sbjct: 616 GFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDP 663
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 164/371 (44%), Gaps = 44/371 (11%)
Query: 109 PISF-TFSALFSAVTNLTLGTQ---LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARK 164
P+S+ + LF + ++ L Q + +H + IF+ N I+ Y K GC+D AR+
Sbjct: 58 PVSYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARE 117
Query: 165 VFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEA 224
+F+EMP+RD SW +ITA A+NG + E
Sbjct: 118 LFEEMPERDGGSWNAVITACAQNG-------------------------------VSDEV 146
Query: 225 LEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALV 284
FR + G+ E + AG + +C + + + C G+ + NV + +++V
Sbjct: 147 FRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGY--SGNVDLETSIV 204
Query: 285 DMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHV 344
D+Y KC + +A VF + + +++ ++ + G A+ +F++MLE ++P +
Sbjct: 205 DVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNH 264
Query: 345 TFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVET 404
T V++AC+ + ++ G+ + + + VV + D+ + LE A ++ +
Sbjct: 265 TVSSVMLACSRSLALEVGKVIHA-IAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQ 323
Query: 405 MPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPN-NIGNYLLLSNTYASAGRWDD 463
+ W + + + G A R LF+L P NI ++ + Y A WD+
Sbjct: 324 TR-SKDLKSWTSAMSGYAMSGLTREA----RELFDLMPERNIVSWNAMLGGYVHAHEWDE 378
Query: 464 VSRVRKLMRDK 474
LMR +
Sbjct: 379 ALDFLTLMRQE 389
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 100/250 (40%), Gaps = 43/250 (17%)
Query: 12 VVSILNTCTTL---RRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLF 68
+V ILN C+ + + KQ H IYRH + ++ I+ N L + L + F
Sbjct: 398 LVWILNVCSGISDVQMGKQAHGFIYRHG-YDTNVIVANALLDMYGKCGTL---QSANIWF 453
Query: 69 SQVPS-PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN---L 124
Q+ + ++AL+ G +AL + M+ + P +T + L + N L
Sbjct: 454 RQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVE-AKPSKYTLATLLAGCANIPAL 512
Query: 125 TLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAY 184
LG +H + G+ D+ + M+ MY K C D A +VF E RD++ W +I
Sbjct: 513 NLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGC 572
Query: 185 ARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLA 244
RNG KE E F L G++ D VT
Sbjct: 573 CRNGR-------------------------------SKEVFELFMLLENEGVKPDHVTFL 601
Query: 245 GAISACAQLG 254
G + AC + G
Sbjct: 602 GILQACIREG 611
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 197/396 (49%), Gaps = 22/396 (5%)
Query: 222 KEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGS 281
+EALE L + G D L G C ++ A ++A R + + AR+
Sbjct: 94 REALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEA---RVVHDCITPLDARSY---H 147
Query: 282 ALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKP 341
+++MYS C + ++A NVF M +RN+ T+ +MI A +G AI +F +E KP
Sbjct: 148 TVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKP 207
Query: 342 NHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQL 401
+ F V AC G +++G F +M YG+V S + Y + ++L GHL++AL
Sbjct: 208 DKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDF 267
Query: 402 VETMPVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRW 461
VE M VEP+ +W L+ V G ++ + + + +L+ + + SN A +
Sbjct: 268 VERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKE---SNAGLVAAKA 324
Query: 462 DD--VSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERL 519
D + ++++L + ++ +P +HEF AGD H + + A L ++
Sbjct: 325 SDSAMEKLKELRYCQMIRDDPKKR--------MHEFRAGDTSH--LGTV-SAFRSLKVQM 373
Query: 520 KAIGYLPNLSSVPYDIGDKEKRFLLMAHSEKLALAFGLLNTDAGSTIKIMKNLRICEDCH 579
IG++P + ++EK L+ S KLA A ++N++A + +++N+R C D H
Sbjct: 374 LDIGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMRTCIDGH 433
Query: 580 IVMCGASKVTGRKIVVRDNMRFHHFLNGACSCGDFW 615
S +TGR ++ RD ++H + NG CSC D+W
Sbjct: 434 NTFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 165/351 (47%), Gaps = 43/351 (12%)
Query: 9 EWQVVSILNTCT---TLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPR 65
E+ V SIL C+ LR +Q+H+ + + + ++ T+L+ + S R
Sbjct: 284 EFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLM----DMYAKCGEISDCR 339
Query: 66 LLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VT 122
+F + + N ++++I A+ G EA+ L+ M+ + + + T ++ A V
Sbjct: 340 KVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVG 399
Query: 123 NLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELIT 182
L LG +LHA + ++++ +T++ +Y K G A V ++P R
Sbjct: 400 ALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSR---------- 449
Query: 183 AYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
D V+WTAM++G + EAL+F + + + G+E + T
Sbjct: 450 ---------------------DVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFT 488
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
+ A+ ACA + + IA+ + NV VGSAL+ MY+KCG V EA+ VF
Sbjct: 489 YSSALKACANSESLLIGRSIHSIAKKNH--ALSNVFVGSALIHMYAKCGFVSEAFRVFDS 546
Query: 303 MKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVAC 353
M E+N ++ +MI+G+A +G R A+KL Y M + + F +L C
Sbjct: 547 MPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 176/362 (48%), Gaps = 27/362 (7%)
Query: 70 QVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQ 129
+V N + S+L+ Y G T ALR + M + + +++A+ SA + G
Sbjct: 212 KVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDV----ISWTAVISACSRK--GHG 265
Query: 130 LHAHALLLGFASDIFVNN-----TMIKMYVKSGCLDSARKV----FDEMPQRDVVSWTEL 180
+ A + +G + F+ N +++K + L R+V M + DV T L
Sbjct: 266 IKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSL 325
Query: 181 ITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
+ YA+ G+++ R++FD + ++ V WT+++ +A+ +EA+ FR ++ + +
Sbjct: 326 MDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANN 385
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
+T+ + AC +GA + A+ +NV +GS LV +Y KCG +A+NV
Sbjct: 386 LTVVSILRACGSVGALLLGKELH--AQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVL 443
Query: 301 RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVD 360
+ + R+ ++++MI G + G A+ EM++ ++PN T+ L AC ++ +
Sbjct: 444 QQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLL 503
Query: 361 QGQYLFSNMEGCYGV----VPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGA 416
G+ + S + + + V SA + + + G + +A ++ ++MP E N W A
Sbjct: 504 IGRSIHSIAKKNHALSNVFVGSA-----LIHMYAKCGFVSEAFRVFDSMP-EKNLVSWKA 557
Query: 417 LL 418
++
Sbjct: 558 MI 559
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 129/535 (24%), Positives = 217/535 (40%), Gaps = 99/535 (18%)
Query: 9 EWQVVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLF 68
EW L + +R K++HA + Q Y NL+ ++ L Y R +F
Sbjct: 90 EW-----LQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLI----SSCVRLGDLVYARKVF 140
Query: 69 SQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT--- 125
+P N ++A+I Y G EA L+ I FT +F + NL
Sbjct: 141 DSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKH---GIRFTNERMFVCLLNLCSRR 197
Query: 126 ----LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELI 181
LG Q+H + + +G V N +++ + L+
Sbjct: 198 AEFELGRQVHGNMVKVG------VGNLIVE--------------------------SSLV 225
Query: 182 TAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
YA+ G++ SA FD ++ KD ++WTA+++ ++ +A+ F + +E
Sbjct: 226 YFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEF 285
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
T+ + AC++ A + V + +V VG++L+DMY+KCG + + VF
Sbjct: 286 TVCSILKACSEEKALRFGRQVHSLVVKRMIKT--DVFVGTSLMDMYAKCGEISDCRKVFD 343
Query: 302 GMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGL--- 358
GM RN T++S+I A G AI LF M + N++T V +L AC G
Sbjct: 344 GMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLL 403
Query: 359 ------------VDQGQYLFSNMEGCY-------------GVVPSADHYACMADLLGRA- 392
+++ Y+ S + Y +PS D + A + G +
Sbjct: 404 GKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSS 463
Query: 393 -GHLEKALQLVETM---PVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNN---- 444
GH +AL ++ M VEPN + + L A N + + ++ R + + N
Sbjct: 464 LGHESEALDFLKEMIQEGVEPNPFTYSSALKAC---ANSE-SLLIGRSIHSIAKKNHALS 519
Query: 445 ---IGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFL 496
+G+ L+ + YA G + RV M +KNL +RNG E L
Sbjct: 520 NVFVGSALI--HMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREAL 572
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 108/248 (43%), Gaps = 41/248 (16%)
Query: 12 VVSILNTCTT---LRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLF 68
VVSIL C + L K+LHA I ++++ ++ YI + L+ + +
Sbjct: 388 VVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFN----VL 443
Query: 69 SQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN---LT 125
Q+PS + ++A+I + G +EAL M + + P FT+S+ A N L
Sbjct: 444 QQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLL 503
Query: 126 LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYA 185
+G +H+ A S++FV + +I MY K G + A +V
Sbjct: 504 IGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRV-------------------- 543
Query: 186 RNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
FD + K+ V+W AM+ GYA+N +EAL+ + G E D+ A
Sbjct: 544 -----------FDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFAT 592
Query: 246 AISACAQL 253
+S C +
Sbjct: 593 ILSTCGDI 600
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 174/399 (43%), Gaps = 51/399 (12%)
Query: 12 VVSILNTCTTLRRAKQLHAHIYR-HNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
++ +L L+ K++HAH+ + N + ++ + L+ + + R +F
Sbjct: 322 ILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLI----DLYCKCGDMASGRRVFYG 377
Query: 71 VPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL---TLG 127
N ++AL+ Y G F +ALR M+ + P T + + L G
Sbjct: 378 SKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQG 437
Query: 128 TQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARN 187
++H +AL F ++ + +++ MY K G E P R
Sbjct: 438 KEIHCYALKNLFLPNVSLVTSLMVMYSKCGV--------PEYPIR--------------- 474
Query: 188 GDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAI 247
LFD L+ ++ AWTAM+ Y +N + +E FR + + D VT+ +
Sbjct: 475 --------LFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVL 526
Query: 248 SACAQLGASK-----DADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
+ C+ L A K ++ ES F AR ++ MY KCG++ A F
Sbjct: 527 TVCSDLKALKLGKELHGHILKKEFESIPFVSAR-------IIKMYGKCGDLRSANFSFDA 579
Query: 303 MKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQG 362
+ + + T++++I + + R AI F +M+ PN TF VL C+ AG VD+
Sbjct: 580 VAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEA 639
Query: 363 QYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQL 401
F+ M Y + PS +HY+ + +LL R G +E+A +L
Sbjct: 640 YRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 186/419 (44%), Gaps = 57/419 (13%)
Query: 14 SILNTCT---TLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQ 70
++L C +L KQ+H HI + L + ++ T L+ H+ T + + +F +
Sbjct: 116 ALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLV-HMYTACGSV---KDAQKVFDE 171
Query: 71 VPSPNPFLYSALIRAYTLRGP--FTEALRLYTSMRNQRITPISFTFSALF---SAVTNLT 125
S N + ++AL+R + G + + L +T MR + ++ S +F + + L
Sbjct: 172 STSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALR 231
Query: 126 LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYA 185
G + HA A+ G + +F+ +++ MY K G + AR+VFDE+ +RD+V W
Sbjct: 232 QGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVW-------- 283
Query: 186 RNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCL-REAGMETDEVTLA 244
AM+ G A N EAL FR + E + + V L
Sbjct: 284 -----------------------GAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILT 320
Query: 245 GAISACAQLGASKDADWVRC-IAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
+ + A K V + +S + V S L+D+Y KCG++ VF G
Sbjct: 321 TILPVLGDVKALKLGKEVHAHVLKSKNY--VEQPFVHSGLIDLYCKCGDMASGRRVFYGS 378
Query: 304 KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQ 363
K+RNA ++++++ G+A +GR A++ M + +P+ VT VL C + QG+
Sbjct: 379 KQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGK 438
Query: 364 YLFSNMEGCYGV----VPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGALL 418
+ CY + +P+ + + + G E ++L + + + N W A++
Sbjct: 439 EIH-----CYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLE-QRNVKAWTAMI 491
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 161/381 (42%), Gaps = 48/381 (12%)
Query: 55 FPH-LPIHSYPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFT 113
FP LP+HS NP++ I+ + + AL + + + I + T
Sbjct: 65 FPSSLPLHS-----------KNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATT 113
Query: 114 FSALFSAVT---NLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMP 170
FSAL A +L G Q+H H + G S+ F+ ++ MY G + A+KVFDE
Sbjct: 114 FSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDEST 173
Query: 171 QRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRC 230
+V SW L+ G + S ++ + ++ L F
Sbjct: 174 SSNVYSWNALL-----RGTVISGKKRY------------------------QDVLSTFTE 204
Query: 231 LREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKC 290
+RE G++ + +L+ + A GAS ++ A + G +V + ++LVDMY KC
Sbjct: 205 MRELGVDLNVYSLSNVFKSFA--GASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKC 262
Query: 291 GNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEML-ETEIKPNHVTFVGV 349
G V A VF + ER+ + +MI G A + R A+ LF M+ E +I PN V +
Sbjct: 263 GKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTI 322
Query: 350 LVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEP 409
L + G+ + +++ V ++ + DL + G + ++ +
Sbjct: 323 LPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSK-QR 381
Query: 410 NGAVWGALLGASHVHGNPDVA 430
N W AL+ +G D A
Sbjct: 382 NAISWTALMSGYAANGRFDQA 402
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 73/104 (70%)
Query: 512 LDDLLERLKAIGYLPNLSSVPYDIGDKEKRFLLMAHSEKLALAFGLLNTDAGSTIKIMKN 571
L L + ++ GY+P V +DI ++ K LM HSE+LA+AFG++NT G+TI++MKN
Sbjct: 136 LKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRVMKN 195
Query: 572 LRICEDCHIVMCGASKVTGRKIVVRDNMRFHHFLNGACSCGDFW 615
LRIC DCH + S + R+I+VRDN RFHHF +G CSCGD+W
Sbjct: 196 LRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 163/340 (47%), Gaps = 23/340 (6%)
Query: 77 FLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHAHALL 136
+ +SALI AY G EA+ ++ SM+ + P T++A+ A G + A
Sbjct: 269 YAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGK--GGMEFKQVAKF 326
Query: 137 L------GFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYAR 186
G D N+++ + + G ++AR +FDEM R DV S+ L+ A +
Sbjct: 327 FDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
Query: 187 NGDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
G M+ A E+ ++ VK + V+++ ++ G+A+ EAL F +R G+ D V+
Sbjct: 387 GGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
+S ++G S++A + + E + G ++V+ +AL+ Y K G +E VF
Sbjct: 447 YNTLLSIYTKVGRSEEA--LDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 303 MKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGL 358
MK N TYS++I G++ G + A+++F E ++ + V + ++ A GL
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564
Query: 359 VDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKA 398
V L M G+ P+ Y + D GR+ ++++
Sbjct: 565 VGSAVSLIDEMTK-EGISPNVVTYNSIIDAFGRSATMDRS 603
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 141/344 (40%), Gaps = 50/344 (14%)
Query: 77 FLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSAL---FSAVTNLTLGTQLHAH 133
F Y+ L+ A G A + M +RI P ++S + F+ L
Sbjct: 375 FSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGE 434
Query: 134 ALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMP----QRDVVSWTELITAYARNGD 189
LG A D NT++ +Y K G + A + EM ++DVV++ L+ Y + G
Sbjct: 435 MRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGK 494
Query: 190 MNSARELFDELD----VKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
+ +++F E+ + + + ++ ++ GY++ + KEA+E FR + AG+ D V +
Sbjct: 495 YDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSA 554
Query: 246 AISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE 305
I A + G A V I E + G + NV+ ++++D + + ++ + + G
Sbjct: 555 LIDALCKNGLVGSA--VSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNG--- 609
Query: 306 RNAFTYSSMIVGFAIHGRARAAIKL-----------------------------FYEMLE 336
+ +SS + I+L F +M +
Sbjct: 610 -GSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQ 668
Query: 337 TEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNME----GCYGVV 376
EIKPN VTF +L AC+ + L + YGVV
Sbjct: 669 LEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVV 712
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 139/315 (44%), Gaps = 16/315 (5%)
Query: 178 TELITAYARNGDMNSARELFDELDV----KDKVAWTAMVTGYAQNAMPKEALEFFRCLRE 233
+ +I+ R G + A+ +F+ A++A+++ Y ++ + +EA+ F ++E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 234 AGMETDEVTLAGAISACAQLGAS-KDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGN 292
G+ + VT I AC + G K + +G P R + ++L+ + S+ G
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDR--ITFNSLLAVCSRGGL 354
Query: 293 VEEAYNVFRGMK----ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVG 348
E A N+F M E++ F+Y++++ G+ A ++ +M I PN V++
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 349 VLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMP-- 406
V+ AG D+ LF M G+ Y + + + G E+AL ++ M
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMR-YLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 407 -VEPNGAVWGALLGASHVHGNPD-VAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDV 464
++ + + ALLG G D V ++ + E N+ Y L + Y+ G + +
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 465 SRVRKLMRDKNLKKN 479
+ + + L+ +
Sbjct: 534 MEIFREFKSAGLRAD 548
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 279 VGSALVDMYSKCGNVEEAYNVFR----GMKERNAFTYSSMIVGFAIHGRARAAIKLFYEM 334
+ SA++ + G V A +F G + +S++I + G AI +F M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 335 LETEIKPNHVTFVGVLVACTHAGL-VDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAG 393
E ++PN VT+ V+ AC G+ Q F M+ GV P + + + R G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQR-NGVQPDRITFNSLLAVCSRGG 353
Query: 394 HLEKALQLVETMP---VEPNGAVWGALLGASHVHGNPDVA-EIVSRHLFELEPNNIGNYL 449
E A L + M +E + + LL A G D+A EI+++ + N+ +Y
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 450 LLSNTYASAGRWDDVSRVRKLMR 472
+ + +A AGR+D+ + MR
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMR 436
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 173/409 (42%), Gaps = 57/409 (13%)
Query: 63 YPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT 122
+ +L SQV SPN F Y+ LIR + G AL L+ M + P T++ L
Sbjct: 193 FKEMLESQV-SPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 123 NLT----------------LGTQLHAHALLL----------------------GFASDIF 144
L L L ++ +++ G++ D
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 145 VNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYARNGDMNSARELFDEL 200
NT+IK Y K G A + EM + V+++T LI + + G+MN A E D++
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 201 DVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGAS 256
V+ ++ +T +V G++Q EA R + + G VT I+ G
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 257 KDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER----NAFTYS 312
+DA V + G P +V+ S ++ + + +V+EA V R M E+ + TYS
Sbjct: 432 EDAIAVLEDMKEKGLSP--DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 313 SMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGC 372
S+I GF R + A L+ EML + P+ T+ ++ A G +++ L + M
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE- 548
Query: 373 YGVVPSADHYACMADLLGRAGHLEKALQLVETMPVE---PNGAVWGALL 418
GV+P Y+ + + L + +A +L+ + E P+ + L+
Sbjct: 549 KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 155/364 (42%), Gaps = 35/364 (9%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT---NLTLGTQ 129
S + Y+ LI+ Y G F +AL ++ M +TP T+++L ++ N+ +
Sbjct: 307 SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME 366
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYA 185
+ G + T++ + + G ++ A +V EM VV++ LI +
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHC 426
Query: 186 RNGDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
G M A + +++ K D V+++ +++G+ ++ EAL R + E G++ D +
Sbjct: 427 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 486
Query: 242 TLAGAISA-CAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
T + I C Q + D E G + +AL++ Y G++E+A +
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYE---EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLH 543
Query: 301 RGMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTH- 355
M E+ + TYS +I G R R A +L ++ E P+ VT+ ++ C++
Sbjct: 544 NEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNI 603
Query: 356 --------------AGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQL 401
G++ + +F +M G P Y M RAG + KA L
Sbjct: 604 EFKSVVSLIKGFCMKGMMTEADQVFESMLG-KNHKPDGTAYNIMIHGHCRAGDIRKAYTL 662
Query: 402 VETM 405
+ M
Sbjct: 663 YKEM 666
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 173/376 (46%), Gaps = 28/376 (7%)
Query: 79 YSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSAL---FSAVTNLTLGTQLHAHAL 135
Y+ L+ + G E ++Y M ++ P +T++ + + + N+ Q + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 136 LLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMP----QRDVVSWTELITAYARNGDMN 191
G D F ++I Y + LDSA KVF+EMP +R+ V++T LI ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 192 SARELFDELDVKDKVA------WTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
A +LF + +KD +T ++ + EAL + + E G++ + T
Sbjct: 306 EAMDLF--VKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 246 AI-SACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK 304
I S C+Q K + + + E G P NV+ +AL++ Y K G +E+A +V M+
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLE-KGLMP--NVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 305 ER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVD 360
R N TY+ +I G+ A+ + +MLE ++ P+ VT+ ++ +G D
Sbjct: 421 SRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479
Query: 361 QGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMP---VEPNGAVWGAL 417
L S M G+VP Y M D L ++ +E+A L +++ V PN ++ AL
Sbjct: 480 SAYRLLSLMND-RGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 418 LGASHVHGNPDVAEIV 433
+ G D A ++
Sbjct: 539 IDGYCKAGKVDEAHLM 554
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 117/517 (22%), Positives = 201/517 (38%), Gaps = 108/517 (20%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV--TNLTLGTQLH 131
PN Y+ALI Y RG +A+ + M +++++P + T++ L +N+ +
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVL 450
Query: 132 AHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVV----SWTELITAYARN 187
L D+ N++I +SG DSA ++ M R +V ++T +I + ++
Sbjct: 451 NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKS 510
Query: 188 GDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
+ A +LFD L+ K + V +TA++ GY + EA + + +T
Sbjct: 511 KRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTF 570
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
I G K+A + G P V + L+ K G+ + AY+ F+ M
Sbjct: 571 NALIHGLCADGKLKEATLLEEKMVKIGLQPT--VSTDTILIHRLLKDGDFDHAYSRFQQM 628
Query: 304 ----KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLV 359
+ +A TY++ I + GR A + +M E + P+ T+ ++ G
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI-----KGYG 683
Query: 360 DQGQYLFS-------NMEGC------------------YGVVPSADHYAC-MADLLGRAG 393
D GQ F+ GC YG ++ C M++++
Sbjct: 684 DLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMM---- 739
Query: 394 HLEKALQLVETM---PVEPNGAVWGAL-LGASHVHGNPDVAEIVSRHLFELEPNNIGNYL 449
+ ++L+E M V PN + L LG V GN VAE V H
Sbjct: 740 EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEV-GNLRVAEKVFDH------------- 785
Query: 450 LLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIK 509
+++N G S E V + L+ K + NE
Sbjct: 786 --------------------------MQRNEGISPSEL---VFNALLSCCCKLKKHNEAA 816
Query: 510 KALDDLLERLKAIGYLPNLSSVP------YDIGDKEK 540
K +DD++ +G+LP L S Y G+KE+
Sbjct: 817 KVVDDMI----CVGHLPQLESCKVLICGLYKKGEKER 849
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 138/347 (39%), Gaps = 32/347 (9%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSAL---FSAVTNLTLGTQ 129
+PN +Y+ALI Y G EA + M ++ P S TF+AL A L T
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEM----PQRDVVSWTELITAYA 185
L + +G + + +I +K G D A F +M + D ++T I Y
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648
Query: 186 RNGDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
R G + A ++ ++ D +++++ GY A + + +R+ G E +
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQH 708
Query: 242 TLAGAISACAQL--GASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNV 299
T I ++ G K ++ C N++ +V++ K VE +
Sbjct: 709 TFLSLIKHLLEMKYGKQKGSEPELC--------AMSNMMEFDTVVELLEKM--VEHSVT- 757
Query: 300 FRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETE-IKPNHVTFVGVLVACTHAGL 358
NA +Y +I+G G R A K+F M E I P+ + F +L C
Sbjct: 758 ------PNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKK 811
Query: 359 VDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM 405
++ + +M C G +P + + L + G E+ + + +
Sbjct: 812 HNEAAKVVDDM-ICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNL 857
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 15/215 (6%)
Query: 276 NVLVGSALVDMYSKCGNVEEAYNVFRGMKER----NAFTYSSMIVGFAIHGRARAAIKLF 331
N+ + +V+ Y K GNVEEA + E + FTY+S+I+G+ +A K+F
Sbjct: 217 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVF 276
Query: 332 YEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEG--CYGVVPSADHYACMADLL 389
EM + N V + ++ A +D+ LF M+ C+ P+ Y + L
Sbjct: 277 NEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECF---PTVRTYTVLIKSL 333
Query: 390 GRAGHLEKALQLVETMP---VEPNGAVWGALLGASHVHGNPDVAEIVSRHLFE--LEPNN 444
+ +AL LV+ M ++PN + L+ + + A + + E L PN
Sbjct: 334 CGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNV 393
Query: 445 IGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKN 479
I Y L N Y G +D V +LM + L N
Sbjct: 394 I-TYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 154/347 (44%), Gaps = 18/347 (5%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL---TLGTQL 130
P +Y+ +I A +AL L+T M N+ I P T+++L + N + ++L
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYAR 186
+ + ++ + +I +VK G L A K++DEM +R D+ +++ LI +
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 187 NGDMNSARELFDELDVKD----KVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
+ ++ A+ +F+ + KD V + ++ G+ + E +E FR + + G+ + VT
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF-- 300
I Q +A V S G P +++ S L+D G VE A VF
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLP--DIMTYSILLDGLCNNGKVETALVVFEY 491
Query: 301 --RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGL 358
R E + +TY+ MI G G+ LF + +KPN VT+ ++ GL
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 551
Query: 359 VDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM 405
++ LF M+ G +P + Y + R G + +L+ M
Sbjct: 552 KEEADALFREMKE-EGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 171/411 (41%), Gaps = 24/411 (5%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN---LTLGTQ 129
S N + YS LI + R + AL + M P T ++L + + ++
Sbjct: 113 SHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVS 172
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMP----QRDVVSWTELITAYA 185
L + +G+ D F NT+I + A + D M Q D+V++ ++
Sbjct: 173 LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLC 232
Query: 186 RNGDMNSARELFDELDVKD----KVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
+ GD++ A L +++ V + ++ +AL F + G+ + V
Sbjct: 233 KRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
T I G DA + P NV+ SAL+D + K G + EA ++
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINP--NVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 302 GMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAG 357
M +R + FTYSS+I GF +H R A +F M+ + PN VT+ ++ A
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 358 LVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM---PVEPNGAVW 414
VD+G LF M G+V + Y + +A + A + + M V P+ +
Sbjct: 411 RVDEGMELFREMSQ-RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Query: 415 GALLGASHVHGNPDVAEIVSRHL--FELEPNNIGNYLLLSNTYASAGRWDD 463
LL +G + A +V +L ++EP +I Y ++ AG+ +D
Sbjct: 470 SILLDGLCNNGKVETALVVFEYLQRSKMEP-DIYTYNIMIEGMCKAGKVED 519
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 139/315 (44%), Gaps = 19/315 (6%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN---LTLGTQL 130
PN Y++LIR G +++A RL + M ++I P TFSAL A L +L
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRD----VVSWTELITAYAR 186
+ + DIF +++I + LD A+ +F+ M +D VV++ LI + +
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 187 NGDMNSARELFDELD----VKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
++ ELF E+ V + V +T ++ G+ Q A F+ + G+ D +T
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 468
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF-- 300
+ + G + A V + S P ++ + +++ K G VE+ +++F
Sbjct: 469 YSILLDGLCNNGKVETALVVFEYLQRSKMEP--DIYTYNIMIEGMCKAGKVEDGWDLFCS 526
Query: 301 ---RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAG 357
+G+K N TY++M+ GF G A LF EM E P+ T+ ++ A G
Sbjct: 527 LSLKGVKP-NVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Query: 358 LVDQGQYLFSNMEGC 372
L M C
Sbjct: 586 DKAASAELIREMRSC 600
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 150/344 (43%), Gaps = 47/344 (13%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHAH 133
PN Y++LIR G +++A RL + M ++I P TFSAL A
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA------------- 334
Query: 134 ALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYARNGD 189
+VK G L A K++DEM +R D+ +++ LI + +
Sbjct: 335 -------------------FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 190 MNSARELFDELDVKD----KVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
++ A+ +F+ + KD V + ++ G+ + +E +E FR + + G+ + VT
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 246 AISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK- 304
I Q G A + S G P +++ S L+D K G +E+A VF ++
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPP--DIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Query: 305 ---ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
E + +TY+ MI G G+ LF + +KPN + + ++ GL ++
Sbjct: 494 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Query: 362 GQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM 405
LF M+ G +P++ Y + R G + +L++ M
Sbjct: 554 ADALFREMKE-DGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 134/280 (47%), Gaps = 23/280 (8%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLH- 131
+PN +SALI A+ G EA +LY M + I P FT+S+L + + +L
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL---INGFCMHDRLDE 378
Query: 132 -AHALLLGFASDIFVN----NTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELIT 182
H L + D F N NT+IK + K+ ++ ++F EM QR + V++ LI
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 183 AYARNGDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET 238
+ GD + A+++F ++ D + ++ ++ G + ++AL F L+++ ME
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
Query: 239 DEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYN 298
D T I + G +D + C G P NV++ + ++ + + G EEA
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP--NVIIYTTMISGFCRKGLKEEADA 556
Query: 299 VFRGMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEM 334
+FR MKE N+ TY+++I G A+ +L EM
Sbjct: 557 LFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 165/406 (40%), Gaps = 51/406 (12%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV---TNLTLGTQL 130
P+ S+L+ Y +EA+ L M P + TF+ L + + L
Sbjct: 148 PDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVAL 207
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMP----QRDVVSWTELITAYAR 186
+ G D+F T++ K G +D A + +M + DVV +T +I A
Sbjct: 208 IDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCN 267
Query: 187 NGDMNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGA 246
++N A LF E+D K G+ + VT
Sbjct: 268 YKNVNDALNLFTEMDNK-------------------------------GIRPNVVTYNSL 296
Query: 247 ISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER 306
I G DA + P NV+ SAL+D + K G + EA ++ M +R
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINP--NVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 307 ----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQG 362
+ FTYSS+I GF +H R A +F M+ + PN VT+ ++ A V++G
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 363 QYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM---PVEPNGAVWGALLG 419
LF M G+V + Y + L +AG + A ++ + M V P+ + LL
Sbjct: 415 MELFREMSQ-RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 420 ASHVHGNPDVAEIVSRHL--FELEPNNIGNYLLLSNTYASAGRWDD 463
+G + A +V +L ++EP +I Y ++ AG+ +D
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEP-DIYTYNIMIEGMCKAGKVED 518
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 156/343 (45%), Gaps = 18/343 (5%)
Query: 78 LYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL---TLGTQLHAHA 134
+YS +I + +AL L+T M N+ I P FT+S+L S + N + ++L +
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 135 LLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYARNGDM 190
L ++ N++I + K G L A K+FDEM QR ++V++ LI + + +
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 191 NSARELFDELDVKD----KVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGA 246
+ A+++F + KD V + ++ G+ + + +E FR + G+ + VT
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 247 ISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK-- 304
I Q +A V S G P N++ + L+D K G +E+A VF ++
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHP--NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Query: 305 --ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQG 362
E + +TY+ M G G+ LF + +KP+ + + ++ GL ++
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Query: 363 QYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM 405
LF M+ G +P + Y + R G + +L++ M
Sbjct: 540 YTLFIKMKE-DGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 173/411 (42%), Gaps = 24/411 (5%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN---LTLGTQ 129
S N + Y+ +I R + AL + M P T ++L + + ++
Sbjct: 97 SHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 156
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMP----QRDVVSWTELITAYA 185
L + +G+ D T++ + A + + M Q D+V++ +I
Sbjct: 157 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 216
Query: 186 RNGDMNSARELFDELDV----KDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
+ G+ + A L ++++ D V ++ ++ + +AL F + G+ D
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
T + IS G DA + P NV+ ++L+D ++K G + EA +F
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINP--NVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 302 GMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAG 357
M +R N TY+S+I GF +H R A ++F M+ + P+ VT+ ++ A
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAK 394
Query: 358 LVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM---PVEPNGAVW 414
V G LF +M G+V + Y + +A + A + + M V PN +
Sbjct: 395 KVVDGMELFRDMSR-RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 415 GALLGASHVHGNPDVAEIVSRHL--FELEPNNIGNYLLLSNTYASAGRWDD 463
LL +G + A +V +L ++EP +I Y ++S AG+ +D
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEP-DIYTYNIMSEGMCKAGKVED 503
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 129/303 (42%), Gaps = 17/303 (5%)
Query: 82 LIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT---LGTQLHAHALLLG 138
L R L EA+ L+ M R P FS L SA+ + L +LG
Sbjct: 36 LSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILG 95
Query: 139 FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYARNGDMNSAR 194
+ +++ N MI + L A + +M + +V+ L+ + ++ A
Sbjct: 96 VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155
Query: 195 ELFDELD----VKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISAC 250
L D++ D V +T +V G Q+ EA+ + G + D VT I+
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215
Query: 251 AQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER---- 306
+ G A + + + +V++ S ++D K +V++A N+F M +
Sbjct: 216 CKRGEPDLA--LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273
Query: 307 NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLF 366
+ FTYSS+I +GR A +L +MLE +I PN VTF ++ A G + + + LF
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 367 SNM 369
M
Sbjct: 334 DEM 336
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 167/397 (42%), Gaps = 33/397 (8%)
Query: 72 PSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV---TNLTLGT 128
P P+ +S L+ A F + M ++ +T++ + + + + L+
Sbjct: 61 PFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFAL 120
Query: 129 QLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMP----QRDVVSWTELITAY 184
+ + LG+ I N+++ + + A + D+M Q D V++T L+
Sbjct: 121 AILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGL 180
Query: 185 ARNGDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
++ + A L + + VK D V + A++ G + P AL + + +E D
Sbjct: 181 FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADV 240
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
V + I + + DA + ++ G P +V S+L+ G +A +
Sbjct: 241 VIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP--DVFTYSSLISCLCNYGRWSDASRLL 298
Query: 301 RGMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVA-CTH 355
M ER N T++S+I FA G+ A KLF EM++ I PN VT+ ++ C H
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 356 AGLVDQGQYLFSNM--EGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAV 413
L D+ Q +F+ M + C +P Y + + +A + ++L M G V
Sbjct: 359 DRL-DEAQQIFTLMVSKDC---LPDVVTYNTLINGFCKAKKVVDGMELFRDM--SRRGLV 412
Query: 414 WGALLGASHVHG-----NPDVAEIVSRHLFE--LEPN 443
+ + +HG + D A++V + + + PN
Sbjct: 413 GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 166/398 (41%), Gaps = 59/398 (14%)
Query: 92 FTEALRLYTSMRNQRITPISFTFSAL---------FSAVTNLT----------------- 125
F EAL L+T M R P F+ L F V NL
Sbjct: 53 FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 126 ------------LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR- 172
L + + LGF DI ++I + ++ A + ++M +
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 173 ---DVVSWTELITAYARNGDMNSARELFDELD----VKDKVAWTAMVTGYAQNAMPKEAL 225
DVV +T +I + +NG +N A LFD+++ D V +T++V G + ++A
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 226 EFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVD 285
R + + ++ D +T I A + G DA+ + E A N+ ++L++
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEEL--YNEMIRMSIAPNIFTYTSLIN 290
Query: 286 MYSKCGNVEEAYNVFRGMKERNAF----TYSSMIVGFAIHGRARAAIKLFYEMLETEIKP 341
+ G V+EA +F M+ + F Y+S+I GF + A+K+FYEM + +
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 342 NHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQL 401
N +T+ ++ G + Q +FS+M GV P+ Y + L G ++KAL +
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVS-RGVPPNIRTYNVLLHCLCYNGKVKKALMI 409
Query: 402 VETMP------VEPNGAVWGALLGASHVHGNPDVAEIV 433
E M V PN + LL +G + A +V
Sbjct: 410 FEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMV 447
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 147/329 (44%), Gaps = 20/329 (6%)
Query: 62 SYPRLLFSQVPS----PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSAL 117
+Y LF Q+ + P+ +Y++L+ G + +A L M ++I P TF+AL
Sbjct: 194 NYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNAL 253
Query: 118 FSAVTN---LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR-- 172
A +L+ + + A +IF ++I + GC+D AR++F M +
Sbjct: 254 IDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGC 313
Query: 173 --DVVSWTELITAYARNGDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALE 226
DVV++T LI + + ++ A ++F E+ K + + +T ++ G+ Q P A E
Sbjct: 314 FPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQE 373
Query: 227 FFRCLREAGMETDEVTLAGAISACAQLGASKDADWV-RCIAESSGFGPARNVLVGSALVD 285
F + G+ + T + G K A + + + G A N+ + L+
Sbjct: 374 VFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH 433
Query: 286 MYSKCGNVEEAYNVFRGMKERN----AFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKP 341
G +E+A VF M++R TY+ +I G G+ + A+ LF + +KP
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKP 493
Query: 342 NHVTFVGVLVACTHAGLVDQGQYLFSNME 370
N VT+ ++ GL + LF M+
Sbjct: 494 NVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 115/281 (40%), Gaps = 51/281 (18%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSAL---FSAVTNLTLGTQL 130
P+ ++ALI A+ G F +A LY M I P FT+++L F + Q+
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYAR 186
G D+ ++I + K +D A K+F EM Q+ + +++T LI + +
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 187 NGDMNSARELFDEL---------------------------------DVK----DKVA-- 207
G N A+E+F + D++ D VA
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPN 424
Query: 208 -WT--AMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRC 264
WT ++ G N ++AL F +R+ M+ +T I + G K+A + C
Sbjct: 425 IWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFC 484
Query: 265 IAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE 305
S G P NV+ + ++ + G EA+ +FR MKE
Sbjct: 485 SLPSKGVKP--NVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 5/174 (2%)
Query: 305 ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQY 364
E + T++S+I GF + R A+ + +M+E IKP+ V + ++ + G V+
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 365 LFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM---PVEPNGAVWGALLGAS 421
LF ME YG+ P Y + + L +G A L+ M ++P+ + AL+ A
Sbjct: 199 LFDQMEN-YGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257
Query: 422 HVHGNPDVAEIVSRHLFELE-PNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDK 474
G AE + + + NI Y L N + G D+ ++ LM K
Sbjct: 258 VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 116/475 (24%), Positives = 195/475 (41%), Gaps = 37/475 (7%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN---LTLGTQ 129
S + + YS I + R + AL + M P T S+L + + ++
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYA 185
L + +G+ D F T+I A + D+M QR D+V++ ++
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 186 RNGDMNSARELFDELDV----KDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
+ GD++ A L +++ D V + ++ G + +AL F + G+ D
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
T + IS G DA + P NV+ SAL+D + K G + EA ++
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINP--NVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 302 GMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAG 357
M +R + FTYSS+I GF +H R A +F M+ + PN VT+ ++ A
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 358 LVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM---PVEPNGAVW 414
V++G LF M G+V + Y + +A + A + + M V PN +
Sbjct: 413 RVEEGMELFREMSQ-RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 415 GALLGASHVHGNPDVAEIVSRHLFE--LEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMR 472
LL +G A +V +L +EP +I Y ++ AG+ +D + +
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEP-DIYTYNIMIEGMCKAGKVEDGWELFCNLS 530
Query: 473 DKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPN 527
K + N V + N +I F K D LL+++K G LPN
Sbjct: 531 LKGVSPN-----VIAYNTMISGFCRKGSKEEA--------DSLLKKMKEDGPLPN 572
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 148/344 (43%), Gaps = 47/344 (13%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHAH 133
P+ F YS+LI G +++A RL + M ++I P TFSAL A
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA------------- 337
Query: 134 ALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYARNGD 189
+VK G L A K++DEM +R D+ +++ LI + +
Sbjct: 338 -------------------FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 378
Query: 190 MNSARELFDELDVKD----KVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
++ A+ +F+ + KD V ++ ++ G+ + +E +E FR + + G+ + VT
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 246 AISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF----R 301
I Q +A V S G P N+L + L+D K G + +A VF R
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHP--NILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Query: 302 GMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
E + +TY+ MI G G+ +LF + + PN + + ++ G ++
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEE 556
Query: 362 GQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM 405
L M+ G +P++ Y + R G E + +L++ M
Sbjct: 557 ADSLLKKMKE-DGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 144/307 (46%), Gaps = 24/307 (7%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLH- 131
+PN +SALI A+ G EA +LY M + I P FT+S+L + + +L
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL---INGFCMHDRLDE 381
Query: 132 -AHALLLGFASDIFVN----NTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELIT 182
H L + D F N +T+IK + K+ ++ ++F EM QR + V++T LI
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441
Query: 183 AYARNGDMNSARELFDELDV----KDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET 238
+ + D ++A+ +F ++ + + + ++ G +N +A+ F L+ + ME
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Query: 239 DEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYN 298
D T I + G +D + C G P NV+ + ++ + + G+ EEA +
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSP--NVIAYNTMISGFCRKGSKEEADS 559
Query: 299 VFRGMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACT 354
+ + MKE N+ TY+++I G A+ +L EM + T +G++
Sbjct: 560 LLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST-IGLVTNML 618
Query: 355 HAGLVDQ 361
H G +D+
Sbjct: 619 HDGRLDK 625
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 141/310 (45%), Gaps = 17/310 (5%)
Query: 75 NPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL---TLGTQLH 131
N +YS +I + +AL L+T M N+ + P T+S+L S + N + ++L
Sbjct: 259 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLL 318
Query: 132 AHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYARN 187
+ + ++ N +I +VK G L A K++DEM +R D+ +++ LI + +
Sbjct: 319 SDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 378
Query: 188 GDMNSARELFDELDVKD----KVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
++ A+ +F+ + KD V + ++ G+ + E +E FR + + G+ + VT
Sbjct: 379 DRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTY 438
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF--- 300
I Q +A V S G P N++ + L+D K G +E+A VF
Sbjct: 439 TTLIHGFFQARDCDNAQMVFKQMVSDGVHP--NIMTYNTLLDGLCKNGKLEKAMVVFEYL 496
Query: 301 -RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLV 359
R E +TY+ MI G G+ LF + +KP+ + + ++ GL
Sbjct: 497 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLK 556
Query: 360 DQGQYLFSNM 369
++ LF M
Sbjct: 557 EEADALFRKM 566
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 173/411 (42%), Gaps = 24/411 (5%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN---LTLGTQ 129
S N + Y+ LI + R + AL L M P T S+L + + ++
Sbjct: 117 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYA 185
L + +G+ D T+I A + D M QR ++V++ ++
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 186 RNGDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
+ GD++ A L ++++ + V ++ ++ + +AL F + G+ + +
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
T + IS DA + P NV+ +AL+D + K G + EA ++
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINP--NVVTFNALIDAFVKEGKLVEAEKLYD 354
Query: 302 GMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAG 357
M +R + FTYSS+I GF +H R A +F M+ + PN VT+ ++ A
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414
Query: 358 LVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM---PVEPNGAVW 414
+D+G LF M G+V + Y + +A + A + + M V PN +
Sbjct: 415 RIDEGVELFREMSQ-RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY 473
Query: 415 GALLGASHVHGNPDVAEIVSRHL--FELEPNNIGNYLLLSNTYASAGRWDD 463
LL +G + A +V +L ++EP I Y ++ AG+ +D
Sbjct: 474 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEP-TIYTYNIMIEGMCKAGKVED 523
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 118/248 (47%), Gaps = 21/248 (8%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLH- 131
+PN ++ALI A+ G EA +LY M + I P FT+S+L + + +L
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL---INGFCMHDRLDE 383
Query: 132 -AHALLLGFASDIFVN----NTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELIT 182
H L + D F N NT+I + K+ +D ++F EM QR + V++T LI
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH 443
Query: 183 AYARNGDMNSARELFDELDVKDKV-----AWTAMVTGYAQNAMPKEALEFFRCLREAGME 237
+ + D ++A+ +F ++ V D V + ++ G +N ++A+ F L+ + ME
Sbjct: 444 GFFQARDCDNAQMVFKQM-VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 238 TDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAY 297
T I + G +D + C G P +V++ + ++ + + G EEA
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP--DVIIYNTMISGFCRKGLKEEAD 560
Query: 298 NVFRGMKE 305
+FR M+E
Sbjct: 561 ALFRKMRE 568
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 151/364 (41%), Gaps = 29/364 (7%)
Query: 79 YSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT---LGTQLHAHAL 135
Y ++R +A+ L+ M R P F F+ L SA+ + L L
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 136 LLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMP----QRDVVSWTELITAYARNGDMN 191
LG + +++ N +I + + + A + +M + +V+ + L+ Y ++
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 192 SARELFDELDV----KDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAI 247
A L D++ D + +T ++ G + EA+ + + G + + VT +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 248 SACAQLGASKDADWV-RCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER 306
+ + G D D + + NV++ S ++D K + ++A N+F M+ +
Sbjct: 233 NGLCKRG---DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 307 ----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQG 362
N TYSS+I + R A +L +M+E +I PN VTF ++ A G + +
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 363 QYLFSNMEGCYGVVPSADHYA------CMADLLGRAGHLEKALQLVETMPVEPNGAVWGA 416
+ L+ M + P Y+ CM D L A H+ +L+ + PN +
Sbjct: 350 EKLYDEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHM---FELMISKDCFPNVVTYNT 405
Query: 417 LLGA 420
L+
Sbjct: 406 LING 409
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 80/188 (42%), Gaps = 11/188 (5%)
Query: 66 LLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSAL---FSAVT 122
L+ S+ PN Y+ LI + E + L+ M + + + T++ L F
Sbjct: 390 LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQAR 449
Query: 123 NLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRD----VVSWT 178
+ + + G +I NT++ K+G L+ A VF+ + + + ++
Sbjct: 450 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 509
Query: 179 ELITAYARNGDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREA 234
+I + G + +LF L +K D + + M++G+ + + +EA FR +RE
Sbjct: 510 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRED 569
Query: 235 GMETDEVT 242
G D T
Sbjct: 570 GPLPDSGT 577
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 149/344 (43%), Gaps = 47/344 (13%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHAH 133
PN YS+LI G +++A RL + M ++I P FTFSAL A
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA------------- 335
Query: 134 ALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYARNGD 189
+VK G L A K++DEM +R +V+++ LI + +
Sbjct: 336 -------------------FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 190 MNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
++ A+++F+ + K D V + ++ G+ + +E +E FR + + G+ + VT
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 246 AISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF----R 301
I Q G A + S G P N++ + L+D K G +E+A VF R
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPP--NIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 302 GMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
E +TY+ MI G G+ LF + +KP+ V + ++ G ++
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554
Query: 362 GQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM 405
LF M+ G +P++ Y + R G E + +L++ M
Sbjct: 555 ADALFKEMKE-DGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 139/305 (45%), Gaps = 20/305 (6%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSAL---FSAVTNLTLGTQ 129
+P+ F +SALI A+ G EA +LY M + I P T+S+L F L Q
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYA 185
+ + D+ NT+IK + K ++ +VF EM QR + V++ LI
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 442
Query: 186 RNGDMNSARELFDELDVKDKV-----AWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
+ GD + A+E+F E+ V D V + ++ G +N ++A+ F L+ + ME
Sbjct: 443 QAGDCDMAQEIFKEM-VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
T I + G +D + C G P +V+ + ++ + + G+ EEA +F
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP--DVVAYNTMISGFCRKGSKEEADALF 559
Query: 301 RGMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHA 356
+ MKE N+ Y+++I G A+ +L EM + T +G++ H
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST-IGLVTNMLHD 618
Query: 357 GLVDQ 361
G +D+
Sbjct: 619 GRLDK 623
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/447 (21%), Positives = 179/447 (40%), Gaps = 59/447 (13%)
Query: 72 PSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSAL---FSAVTNLTLGT 128
P P+ +S L+ A F + L M+N I +T+S L F + L L
Sbjct: 77 PFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLAL 136
Query: 129 QLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEM------------------- 169
+ + LG+ +I ++++ Y S + A + D+M
Sbjct: 137 AVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGL 196
Query: 170 --------------------PQRDVVSWTELITAYARNGDMNSARELFDELDVKD----K 205
Q D+V++ ++ + GD + A L ++++
Sbjct: 197 FLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGV 256
Query: 206 VAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCI 265
+ + ++ G + +AL F+ + G+ + VT + IS G DA +
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316
Query: 266 AESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER----NAFTYSSMIVGFAIH 321
P +V SAL+D + K G + EA ++ M +R + TYSS+I GF +H
Sbjct: 317 MIERKINP--DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 374
Query: 322 GRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADH 381
R A ++F M+ P+ VT+ ++ V++G +F M G+V +
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ-RGLVGNTVT 433
Query: 382 YACMADLLGRAGHLEKALQLVETM---PVEPNGAVWGALLGASHVHGNPDVAEIVSRHL- 437
Y + L +AG + A ++ + M V PN + LL +G + A +V +L
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 438 -FELEPNNIGNYLLLSNTYASAGRWDD 463
++EP I Y ++ AG+ +D
Sbjct: 494 RSKMEP-TIYTYNIMIEGMCKAGKVED 519
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 169/407 (41%), Gaps = 69/407 (16%)
Query: 21 TLRRAKQLHAHIY-RHNLHQSSYIIT-----NLLRHLTTTFPHLPIHSYPRLLFSQVPSP 74
+LR K + I+ + N H + +I+ LL F +P R +FS
Sbjct: 124 SLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFS----- 178
Query: 75 NPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQ----L 130
Y+ALI AY G + +L L M+N++I+P T++ + +A L + L
Sbjct: 179 ----YTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGL 234
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQ----RDVVSWTELITAYAR 186
A G DI NT++ G D A VF M D+ +++ L+ + +
Sbjct: 235 FAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGK 294
Query: 187 NGDMNSARELFDEL----DVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
+ +L E+ + D ++ ++ YA++ KEA+ F ++ AG
Sbjct: 295 LRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG------- 347
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
C ++ + S L++++ + G ++ +F
Sbjct: 348 ---------------------CTPNANTY---------SVLLNLFGQSGRYDDVRQLFLE 377
Query: 303 MKERN----AFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGL 358
MK N A TY+ +I F G + + LF++M+E I+P+ T+ G++ AC GL
Sbjct: 378 MKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGL 437
Query: 359 VDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM 405
+ + + M +VPS+ Y + + G+A E+AL TM
Sbjct: 438 HEDARKILQYMT-ANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTM 483
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 151/382 (39%), Gaps = 53/382 (13%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSAL---FSAVTNLTLGTQL 130
P+ Y+ L+ A +RG EA ++ +M + I P T+S L F + L L
Sbjct: 245 PDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDL 304
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYAR 186
G DI N +++ Y KSG + A VF +M + +++ L+ + +
Sbjct: 305 LGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQ 364
Query: 187 NGDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
+G + R+LF E+ D + ++ + + KE + F + E +E D T
Sbjct: 365 SGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMET 424
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
G I AC + G +DA + ++ P+ G +++ + + EEA F
Sbjct: 425 YEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTG--VIEAFGQAALYEEALVAFNT 482
Query: 303 MKE---------------------------------------RNAFTYSSMIVGFAIHGR 323
M E RN T+++ I + G+
Sbjct: 483 MHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGK 542
Query: 324 ARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYA 383
A+K + +M ++ P+ T VL + A LVD+ + F M+ ++PS Y
Sbjct: 543 FEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKAS-DILPSIMCYC 601
Query: 384 CMADLLGRAGHLEKALQLVETM 405
M + G+ + +L+E M
Sbjct: 602 MMLAVYGKTERWDDVNELLEEM 623
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 10/213 (4%)
Query: 272 GPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER----NAFTYSSMIVGFAIHGRA-RA 326
G +R+V +AL++ Y + G E + + MK + TY+++I A G
Sbjct: 171 GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEG 230
Query: 327 AIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMA 386
+ LF EM I+P+ VT+ +L AC GL D+ + +F M G+VP Y+ +
Sbjct: 231 LLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDG-GIVPDLTTYSHLV 289
Query: 387 DLLGRAGHLEKALQLVETMPVE---PNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPN 443
+ G+ LEK L+ M P+ + LL A G+ A V +
Sbjct: 290 ETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCT 349
Query: 444 -NIGNYLLLSNTYASAGRWDDVSRVRKLMRDKN 475
N Y +L N + +GR+DDV ++ M+ N
Sbjct: 350 PNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 382
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 161/364 (44%), Gaps = 21/364 (5%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSA---LFSAVTNLTLGTQ 129
+P+ YS ++ Y G + +L M+ + + P S+ + + L + L +
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYA 185
+ + G D V T+I + K G + +A K F EM R DV+++T +I+ +
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 186 RNGDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
+ GDM A +LF E+ K D V +T ++ GY + K+A + +AG + V
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
T I + G A+ + E G N+ +++V+ K GN+EEA +
Sbjct: 458 TYTTLIDGLCKEGDLDSAN--ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 302 GMK----ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAG 357
+ + TY++++ + G A ++ EML ++P VTF ++ G
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 358 LVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM---PVEPNGAVW 414
+++ G+ L + M G+ P+A + + +L+ A + + M V P+G +
Sbjct: 576 MLEDGEKLLNWMLA-KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTY 634
Query: 415 GALL 418
L+
Sbjct: 635 ENLV 638
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 167/390 (42%), Gaps = 17/390 (4%)
Query: 22 LRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSA 81
L + +L + R L +SYI +++ L + Q P+ +Y+
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 82 LIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSAL---FSAVTNLTLGTQLHAHALLLG 138
LI + RG A + + M ++ ITP T++A+ F + ++ +L G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 139 FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYARNGDMNSAR 194
D +I Y K+G + A +V + M Q +VV++T LI + GD++SA
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 195 ELFDEL---DVKDKV-AWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISAC 250
EL E+ ++ + + ++V G ++ +EA++ AG+ D VT + A
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 251 AQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER---- 306
+ G A + + E G G ++ + L++ + G +E+ + M +
Sbjct: 537 CKSGEMDKAQEI--LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 307 NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLF 366
NA T++S++ + I +AA ++ +M + P+ T+ ++ A + + +LF
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 367 SNMEGCYGVVPSADHYACMADLLGRAGHLE 396
M+G V + + + L R LE
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 145/348 (41%), Gaps = 24/348 (6%)
Query: 139 FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSAREL-- 196
+ SD V + ++ V G L AR+VF++M +V + Y + +
Sbjct: 171 WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATA 230
Query: 197 ------FDELDVKDKVAWTAMVTGYA-QNAMPKEALEFFRCLREAGMETDEVTLAGAISA 249
F E+ V VA +V + Q KEA + G D ++ + ++
Sbjct: 231 IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNG 290
Query: 250 CAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER--- 306
+ G + + + G P N + +++ + + + EA F M +
Sbjct: 291 YCRFGELDKVWKLIEVMKRKGLKP--NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 307 -NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVA-CTHAGLVDQGQY 364
+ Y+++I GF G RAA K FYEM +I P+ +T+ ++ C +V+ G+
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK- 407
Query: 365 LFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM---PVEPNGAVWGALLGAS 421
LF M C G+ P + + + + +AGH++ A ++ M PN + L+
Sbjct: 408 LFHEM-FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 422 HVHGNPDVAEIVSRHLFE--LEPNNIGNYLLLSNTYASAGRWDDVSRV 467
G+ D A + +++ L+P NI Y + N +G ++ ++
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQP-NIFTYNSIVNGLCKSGNIEEAVKL 513
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 161/364 (44%), Gaps = 21/364 (5%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSA---LFSAVTNLTLGTQ 129
+P+ YS ++ Y G + +L M+ + + P S+ + + L + L +
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYA 185
+ + G D V T+I + K G + +A K F EM R DV+++T +I+ +
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 186 RNGDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
+ GDM A +LF E+ K D V +T ++ GY + K+A + +AG + V
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
T I + G A+ + E G N+ +++V+ K GN+EEA +
Sbjct: 458 TYTTLIDGLCKEGDLDSAN--ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 302 GMK----ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAG 357
+ + TY++++ + G A ++ EML ++P VTF ++ G
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 358 LVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM---PVEPNGAVW 414
+++ G+ L + M G+ P+A + + +L+ A + + M V P+G +
Sbjct: 576 MLEDGEKLLNWMLA-KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTY 634
Query: 415 GALL 418
L+
Sbjct: 635 ENLV 638
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 167/390 (42%), Gaps = 17/390 (4%)
Query: 22 LRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSA 81
L + +L + R L +SYI +++ L + Q P+ +Y+
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 82 LIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSAL---FSAVTNLTLGTQLHAHALLLG 138
LI + RG A + + M ++ ITP T++A+ F + ++ +L G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 139 FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYARNGDMNSAR 194
D +I Y K+G + A +V + M Q +VV++T LI + GD++SA
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 195 ELFDEL---DVKDKV-AWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISAC 250
EL E+ ++ + + ++V G ++ +EA++ AG+ D VT + A
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 251 AQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER---- 306
+ G A + + E G G ++ + L++ + G +E+ + M +
Sbjct: 537 CKSGEMDKAQEI--LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 307 NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLF 366
NA T++S++ + I +AA ++ +M + P+ T+ ++ A + + +LF
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 367 SNMEGCYGVVPSADHYACMADLLGRAGHLE 396
M+G V + + + L R LE
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 145/348 (41%), Gaps = 24/348 (6%)
Query: 139 FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSAREL-- 196
+ SD V + ++ V G L AR+VF++M +V + Y + +
Sbjct: 171 WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATA 230
Query: 197 ------FDELDVKDKVAWTAMVTGYA-QNAMPKEALEFFRCLREAGMETDEVTLAGAISA 249
F E+ V VA +V + Q KEA + G D ++ + ++
Sbjct: 231 IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNG 290
Query: 250 CAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER--- 306
+ G + + + G P N + +++ + + + EA F M +
Sbjct: 291 YCRFGELDKVWKLIEVMKRKGLKP--NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 307 -NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVA-CTHAGLVDQGQY 364
+ Y+++I GF G RAA K FYEM +I P+ +T+ ++ C +V+ G+
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK- 407
Query: 365 LFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM---PVEPNGAVWGALLGAS 421
LF M C G+ P + + + + +AGH++ A ++ M PN + L+
Sbjct: 408 LFHEM-FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 422 HVHGNPDVAEIVSRHLFE--LEPNNIGNYLLLSNTYASAGRWDDVSRV 467
G+ D A + +++ L+P NI Y + N +G ++ ++
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQP-NIFTYNSIVNGLCKSGNIEEAVKL 513
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 171/420 (40%), Gaps = 70/420 (16%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV---TNLTLGTQL 130
PN L + LI Y +G EA Y SM +Q I + T++ L + + + ++
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYAR 186
G A D+F +I + K G + A +FDEM + +V+ + L+ + R
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCR 674
Query: 187 NGDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
+G++ A+EL DE+ VK + V + ++ GY ++ EA F ++ G+ D
Sbjct: 675 SGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV 734
Query: 243 LAGAISACAQL----------GASKDA------------DWVRCIAES------------ 268
+ C +L G +K +WV ++
Sbjct: 735 YTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMD 794
Query: 269 ---SGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERN----AFTYSSMIVGFAIH 321
FG +V + ++D K GN+E A +F M+ N TY+S++ G+
Sbjct: 795 GSFDRFGKPNDVTY-NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853
Query: 322 GRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNM-------EGCYG 374
GR +F E + I+P+H+ + ++ A G+ + L M +GC
Sbjct: 854 GRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKL 913
Query: 375 VVPSADHYACMADLLG--RAGHLEKALQLVETM---PVEPNGAVWGALLGASHVHGNPDV 429
+ + C A L G + G +E A +++E M P+ A L+ S + N V
Sbjct: 914 SIST-----CRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRV 968
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 162/364 (44%), Gaps = 23/364 (6%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT---NLTLGTQL 130
P Y++LI Y + L M+ + I +T+ + + +L +
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYAR 186
+ G ++ + T+IK ++++ A +V EM ++ D+ + LI ++
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 187 NGDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
M+ AR E+ + + A ++GY + + A ++ + +RE G+ ++V
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559
Query: 243 LAGAISACAQLGASKDA-DWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
G I+ + G +A R + + G A+ V L++ K V++A +FR
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV---LMNGLFKNDKVDDAEEIFR 616
Query: 302 GMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAG 357
M+ + + F+Y +I GF+ G + A +F EM+E + PN + + +L +G
Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG 676
Query: 358 LVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVE---PNGAVW 414
+++ + L M G+ P+A Y + D ++G L +A +L + M ++ P+ V+
Sbjct: 677 EIEKAKELLDEM-SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVY 735
Query: 415 GALL 418
L+
Sbjct: 736 TTLV 739
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 110/519 (21%), Positives = 199/519 (38%), Gaps = 103/519 (19%)
Query: 70 QVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQ 129
Q +P+ F Y++LI + EA M + P +FT+ A S
Sbjct: 481 QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG--------- 531
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDV----VSWTELITAYA 185
Y+++ SA K EM + V V T LI Y
Sbjct: 532 -----------------------YIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 186 RNGDMNSA----RELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
+ G + A R + D+ + D +T ++ G +N +A E FR +R G+ D
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
+ I+ ++LG + A + G P NV++ + L+ + + G +E+A +
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTP--NVIIYNMLLGGFCRSGEIEKAKELLD 686
Query: 302 GMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAG 357
M + NA TY ++I G+ G A +LF EM + P+ + ++ C
Sbjct: 687 EMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLN 746
Query: 358 LVDQGQYLF-SNMEGC----------------YGVV--------------------PSAD 380
V++ +F +N +GC +G P+
Sbjct: 747 DVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV 806
Query: 381 HYACMADLLGRAGHLEKALQLVETMP---VEPNGAVWGALLGASHVHGN-----PDVAEI 432
Y M D L + G+LE A +L M + P + +LL G P E
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEA 866
Query: 433 VSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVI 492
++ +EP++I Y ++ N + G ++ ++ D+ KN +
Sbjct: 867 IAAG---IEPDHI-MYSVIINAFLKEG----MTTKALVLVDQMFAKNAVDDGCKLSISTC 918
Query: 493 HEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLSSV 531
L+G K E+ +K +++++ RL+ Y+P+ ++V
Sbjct: 919 RALLSGFAKVGEMEVAEKVMENMV-RLQ---YIPDSATV 953
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/476 (22%), Positives = 193/476 (40%), Gaps = 76/476 (15%)
Query: 25 AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIR 84
KQ+ HNL+ S +I R + + +L + P+ +S LI
Sbjct: 95 CKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYE----PDTVTFSTLIN 150
Query: 85 AYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHAHALLL------G 138
L G +EAL L M P T +AL V L L ++ LL+ G
Sbjct: 151 GLCLEGRVSEALELVDRMVEMGHKPTLITLNAL---VNGLCLNGKVSDAVLLIDRMVETG 207
Query: 139 FASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYARNGDMNSAR 194
F + ++K+ KSG A ++ +M +R D V ++ +I ++G +++A
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 195 ELFDELDVK---------------------------------------DKVAWTAMVTGY 215
LF+E+++K D VA++A++ +
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 216 AQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPAR 275
+ +EA E + + + G+ D VT I + A+ + + S G GP
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP-- 385
Query: 276 NVLVGSALVDMYSKCGNVEEAYNVFRGMKER----NAFTYSSMIVGFAIHGRARAAIKLF 331
N+ + L++ Y K +++ +FR M R + TY+++I GF G+ A +LF
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELF 445
Query: 332 YEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLF-----SNMEGCYGVVPSADHYACMA 386
EM+ ++P+ V++ +L G ++ +F S ME G+ H C
Sbjct: 446 QEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC-- 503
Query: 387 DLLGRAGHLEKALQLVETMP---VEPNGAVWGALLGASHVHGNPDVAEIVSRHLFE 439
A ++ A L ++P V+P+ + ++G G+ A+++ R + E
Sbjct: 504 ----NASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 124/288 (43%), Gaps = 23/288 (7%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSAL---FSAV 121
R + + +P+ +SALI + G EA L+ M + I+P + T+++L F
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365
Query: 122 TNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSW 177
L + + G +I N +I Y K+ +D ++F +M R D V++
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425
Query: 178 TELITAYARNGDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLRE 233
LI + G + A+ELF E+ + D V++ ++ G N P++ALE F + +
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Query: 234 AGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGP---ARNVLVGSALVDMYSKC 290
+ ME D I DA + C G P N+++G K
Sbjct: 486 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGG-----LCKK 540
Query: 291 GNVEEAYNVFRGMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEM 334
G++ EA +FR M+E N TY+ +I G A + KL E+
Sbjct: 541 GSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 159/436 (36%), Gaps = 49/436 (11%)
Query: 43 IITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSM 102
+I L T L + Y R+ S Y +R+ + +A+ L+ M
Sbjct: 4 LIQTRLLETGTLRTALFLSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEM 63
Query: 103 RNQRITPISFTFSALFSAVT---NLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCL 159
R P FS LFS V L L L G A +++ + MI C
Sbjct: 64 TRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI------NCC 117
Query: 160 DSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNA 219
RK L A++ M +L E D V ++ ++ G
Sbjct: 118 CRCRK---------------LSLAFSA---MGKIIKLGYE---PDTVTFSTLINGLCLEG 156
Query: 220 MPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLV 279
EALE + E G + +TL ++ G DA + +GF P N +
Sbjct: 157 RVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQP--NEVT 214
Query: 280 GSALVDMYSKCGNVEEAYNVFRGMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEML 335
++ + K G A + R M+ER +A YS +I G G A LF EM
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274
Query: 336 ETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHL 395
K + + + ++ +AG D G L +M + P ++ + D + G L
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK-RKITPDVVAFSALIDCFVKEGKL 333
Query: 396 EKALQLVETM---PVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPN-----NIGN 447
+A +L + M + P+ + +L+ D A H+ +L + NI
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN----HMLDLMVSKGCGPNIRT 389
Query: 448 YLLLSNTYASAGRWDD 463
+ +L N Y A DD
Sbjct: 390 FNILINGYCKANLIDD 405
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 170/389 (43%), Gaps = 29/389 (7%)
Query: 62 SYPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRIT--PISFTFSA--- 116
SY L+ P+ ++ +I + G ++AL L+ SMR +R P TF++
Sbjct: 269 SYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMH 328
Query: 117 LFSAVTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR---- 172
L+S + + + G +I N ++ Y G +A V ++ Q
Sbjct: 329 LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP 388
Query: 173 DVVSWTELITAYARNGDMNSARELF----DELDVKDKVAWTAMVTGYAQNAMPKEALEFF 228
DVVS+T L+ +Y R+ A+E+F E + V + A++ Y N EA+E F
Sbjct: 389 DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIF 448
Query: 229 RCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFG---PARNVLVGSALVD 285
R + + G++ + V++ ++AC++ + D V A+S G A N +GS
Sbjct: 449 RQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGS---- 504
Query: 286 MYSKCGNVEEAYNVFRGMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKP 341
Y +E+A +++ M+++ ++ T++ +I G + AI EM + I
Sbjct: 505 -YINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPL 563
Query: 342 NHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQL 401
+ VL A + G V + + +F+ M+ G P Y M + KA +L
Sbjct: 564 TKEVYSSVLCAYSKQGQVTEAESIFNQMKMA-GCEPDVIAYTSMLHAYNASEKWGKACEL 622
Query: 402 ---VETMPVEPNGAVWGALLGASHVHGNP 427
+E +EP+ AL+ A + G P
Sbjct: 623 FLEMEANGIEPDSIACSALMRAFNKGGQP 651
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 150/349 (42%), Gaps = 20/349 (5%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV---TNLTLGTQL 130
P+ Y ALI A+ G + A+ L M I P T++ L +A N ++
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 235
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMP----QRDVVSWTELITAYAR 186
G D+ +N ++ Y A F+ M + D ++ +I ++
Sbjct: 236 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 295
Query: 187 NGDMNSARELFDELDVK------DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
G + A +LF+ + K D V +T+++ Y+ + F + G++ +
Sbjct: 296 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 355
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
V+ + A A G S A V + +G P +V+ + L++ Y + +A VF
Sbjct: 356 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP--DVVSYTCLLNSYGRSRQPGKAKEVF 413
Query: 301 RGM-KER---NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHA 356
M KER N TY+++I + +G A+++F +M + IKPN V+ +L AC+ +
Sbjct: 414 LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 473
Query: 357 GLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM 405
+ S + + +A + + + + A LEKA+ L ++M
Sbjct: 474 KKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYIN-AAELEKAIALYQSM 521
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 170/389 (43%), Gaps = 29/389 (7%)
Query: 62 SYPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRIT--PISFTFSA--- 116
SY L+ P+ ++ +I + G ++AL L+ SMR +R P TF++
Sbjct: 137 SYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMH 196
Query: 117 LFSAVTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR---- 172
L+S + + + G +I N ++ Y G +A V ++ Q
Sbjct: 197 LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP 256
Query: 173 DVVSWTELITAYARNGDMNSARELF----DELDVKDKVAWTAMVTGYAQNAMPKEALEFF 228
DVVS+T L+ +Y R+ A+E+F E + V + A++ Y N EA+E F
Sbjct: 257 DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIF 316
Query: 229 RCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFG---PARNVLVGSALVD 285
R + + G++ + V++ ++AC++ + D V A+S G A N +GS
Sbjct: 317 RQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGS---- 372
Query: 286 MYSKCGNVEEAYNVFRGMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKP 341
Y +E+A +++ M+++ ++ T++ +I G + AI EM + I
Sbjct: 373 -YINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPL 431
Query: 342 NHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQL 401
+ VL A + G V + + +F+ M+ G P Y M + KA +L
Sbjct: 432 TKEVYSSVLCAYSKQGQVTEAESIFNQMKMA-GCEPDVIAYTSMLHAYNASEKWGKACEL 490
Query: 402 ---VETMPVEPNGAVWGALLGASHVHGNP 427
+E +EP+ AL+ A + G P
Sbjct: 491 FLEMEANGIEPDSIACSALMRAFNKGGQP 519
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 147/349 (42%), Gaps = 20/349 (5%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAV---TNLTLGTQL 130
P+ Y ALI A+ G + A+ L M I P T++ L +A N ++
Sbjct: 44 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 103
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMP----QRDVVSWTELITAYAR 186
G D+ +N ++ Y A F+ M + D ++ +I ++
Sbjct: 104 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 163
Query: 187 NGDMNSARELFDELDVK------DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
G + A +LF+ + K D V +T+++ Y+ + F + G++ +
Sbjct: 164 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 223
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
V+ + A A G S A V + +G P +V+ + L++ Y + +A VF
Sbjct: 224 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP--DVVSYTCLLNSYGRSRQPGKAKEVF 281
Query: 301 RGM-KER---NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHA 356
M KER N TY+++I + +G A+++F +M + IKPN V+ +L AC+ +
Sbjct: 282 LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 341
Query: 357 GLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM 405
+ S + G+ + Y A LEKA+ L ++M
Sbjct: 342 KKKVNVDTVLSAAQS-RGINLNTAAYNSAIGSYINAAELEKAIALYQSM 389
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/437 (20%), Positives = 192/437 (43%), Gaps = 33/437 (7%)
Query: 25 AKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPSPNPFLYSALIR 84
KQL + HN++ + +I R T F + + +L + P+ ++ LI+
Sbjct: 111 CKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYE----PDTTTFNTLIK 166
Query: 85 AYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT---NLTLGTQLHAHALLLGFAS 141
L G +EA+ L M P T++++ + + + +L L +
Sbjct: 167 GLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKA 226
Query: 142 DIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYARNGDMNSARELF 197
D+F +T+I + GC+D+A +F EM + VV++ L+ + G N L
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286
Query: 198 DEL----DVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISA-CAQ 252
++ V + + + ++ + + +EA E ++ + G+ + +T + C Q
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346
Query: 253 LGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER----NA 308
S+ + + + + + +++ ++L+ Y V++ VFR + +R NA
Sbjct: 347 NRLSEANNMLDLMVRNK---CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANA 403
Query: 309 FTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSN 368
TYS ++ GF G+ + A +LF EM+ + P+ +T+ +L G +++ +F +
Sbjct: 404 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 463
Query: 369 MEGC---YGVVPSADHYACMADLLGRAGHLEKALQLVETMP---VEPNGAVWGALLGASH 422
++ G+V Y + + + + G +E A L ++P V+PN + ++
Sbjct: 464 LQKSKMDLGIV----MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519
Query: 423 VHGNPDVAEIVSRHLFE 439
G+ A I+ R + E
Sbjct: 520 KKGSLSEANILLRKMEE 536
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/461 (23%), Positives = 189/461 (40%), Gaps = 43/461 (9%)
Query: 92 FTEALRLYTSMRNQRITPISFTFSALFSAVTNLT---LGTQLHAHALLLGFASDIFVNNT 148
F +AL L+T M + R P F+ L S + + + L +LG + N
Sbjct: 64 FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 149 MIKMYVKSGCLDSARKVFDEMP----QRDVVSWTELITAYARNGDMNSARELFDEL---- 200
++ S A +M + D+V++T L+ Y + A LFD++
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 201 DVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDAD 260
+ V +T ++ +N A+E F + G + VT ++ ++G DA
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 261 WVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEA---YNVFRGMKER-NAFTYSSMIV 316
W+ P NV+ +AL+D + K G + EA YNV M + FTY S+I
Sbjct: 244 WLLRDMMKRRIEP--NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 317 GFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVV 376
G ++G A ++FY M PN V + ++ + V+ G +F M GVV
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQ-KGVV 360
Query: 377 PSADHYACMAD---LLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHGNPDVAEIV 433
+ Y + L+GR ++ + + P+ + LL +G + A ++
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Query: 434 SRHLFELEPN-NIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNP-GYSWVES---R 488
++ + E + NI Y ++ G+ +D + + K +K N Y+ + S R
Sbjct: 421 FEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
Query: 489 NGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNLS 529
G+IHE D L +++K G+LPN S
Sbjct: 481 RGLIHE-----------------ADSLFKKMKEDGFLPNES 504
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 13/243 (5%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHAH 133
PN ++ALI A+ G EA LY M + P FT+ +L + + L +
Sbjct: 256 PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQM 315
Query: 134 ALLL---GFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVV----SWTELITAYAR 186
L+ G + + T+I + KS ++ K+F EM Q+ VV ++T LI Y
Sbjct: 316 FYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCL 375
Query: 187 NGDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
G + A+E+F+++ + D + ++ G N ++AL F +R+ M+ + VT
Sbjct: 376 VGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVT 435
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
I +LG +DA + C S G P NV+ + ++ + + G + EA ++F+
Sbjct: 436 YTIIIQGMCKLGKVEDAFDLFCSLFSKGMKP--NVITYTTMISGFCRRGLIHEADSLFKK 493
Query: 303 MKE 305
MKE
Sbjct: 494 MKE 496
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 137/335 (40%), Gaps = 57/335 (17%)
Query: 67 LFSQVPS----PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSAL---FS 119
LF+Q+ + PN Y+AL+ G + +A L M +RI P TF+AL F
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 120 AVTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVV 175
V L +L+ + + D+F ++I G LD AR++F M + + V
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329
Query: 176 SWTELITAYARNGDMNSARELFDELDVKDKVA----WTAMVTGYAQNAMPKEALEFFRCL 231
+T LI + ++ + ++F E+ K VA +T ++ GY P A E F
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFN-- 387
Query: 232 REAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCG 291
Q+ + + +R NVL+ + G
Sbjct: 388 --------------------QMSSRRAPPDIR----------TYNVLLDGLCCN-----G 412
Query: 292 NVEEAYNVFRGMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFV 347
VE+A +F M++R N TY+ +I G G+ A LF + +KPN +T+
Sbjct: 413 KVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYT 472
Query: 348 GVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHY 382
++ GL+ + LF M+ G +P+ Y
Sbjct: 473 TMISGFCRRGLIHEADSLFKKMKE-DGFLPNESVY 506
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 173/431 (40%), Gaps = 55/431 (12%)
Query: 67 LFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL 126
+ + P+ F Y+ALI + +A R+ MR++ +P + T+
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY------------ 196
Query: 127 GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEM----PQRDVVSWTELIT 182
N MI G LD A KV +++ Q V+++T LI
Sbjct: 197 --------------------NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIE 236
Query: 183 AYARNGDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET 238
A G ++ A +L DE+ + D + ++ G + M A E R L G E
Sbjct: 237 ATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEP 296
Query: 239 DEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYN 298
D ++ + A G ++ + + S P NV+ S L+ + G +EEA N
Sbjct: 297 DVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP--NVVTYSILITTLCRDGKIEEAMN 354
Query: 299 VFRGMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACT 354
+ + MKE+ +A++Y +I F GR AI+ M+ P+ V + VL
Sbjct: 355 LLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLC 414
Query: 355 HAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM---PVEPNG 411
G DQ +F + G G P++ Y M L +G +AL ++ M ++P+
Sbjct: 415 KNGKADQALEIFGKL-GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDE 473
Query: 412 AVWGALLGASHVHGNPDVA--EIVSRHLFELEPNNIG-NYLLLSNTYASAGRWDDVSRVR 468
+ +++ G D A +V E P+ + N +LL + A R +D V
Sbjct: 474 ITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG--FCKAHRIEDAINVL 531
Query: 469 KLMRDKNLKKN 479
+ M + N
Sbjct: 532 ESMVGNGCRPN 542
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 155/365 (42%), Gaps = 23/365 (6%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGT---- 128
SP+ Y+ +I + RG AL++ + + P T++ L A T L G
Sbjct: 190 SPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEA-TMLEGGVDEAL 248
Query: 129 QLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAY 184
+L L G D+F NT+I+ K G +D A ++ + + DV+S+ L+ A
Sbjct: 249 KLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRAL 308
Query: 185 ARNGDMNSAREL----FDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
G +L F E + V ++ ++T ++ +EA+ + ++E G+ D
Sbjct: 309 LNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 368
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
+ I+A + G A S G P +++ + ++ K G ++A +F
Sbjct: 369 YSYDPLIAAFCREGRLDVAIEFLETMISDGCLP--DIVNYNTVLATLCKNGKADQALEIF 426
Query: 301 RGMKE----RNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHA 356
+ E N+ +Y++M G A+ + EM+ I P+ +T+ ++
Sbjct: 427 GKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCRE 486
Query: 357 GLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM---PVEPNGAV 413
G+VD+ L +M C PS Y + +A +E A+ ++E+M PN
Sbjct: 487 GMVDEAFELLVDMRSC-EFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETT 545
Query: 414 WGALL 418
+ L+
Sbjct: 546 YTVLI 550
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 173/392 (44%), Gaps = 26/392 (6%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHAH 133
P+ + LIR + G +A ++ + P T++ + S G +A
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKA--GEINNAL 192
Query: 134 ALL--LGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYARN 187
++L + + D+ NT+++ SG L A +V D M QR DV+++T LI A R+
Sbjct: 193 SVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRD 252
Query: 188 GDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
+ A +L DE+ + D V + +V G + EA++F + +G + + +T
Sbjct: 253 SGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
+ + G DA+ + GF P+ V+ + L++ + G + A ++ M
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPS--VVTFNILINFLCRKGLLGRAIDILEKM 370
Query: 304 KER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLV 359
+ N+ +Y+ ++ GF + AI+ M+ P+ VT+ +L A G V
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430
Query: 360 DQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM---PVEPNGAVWGA 416
+ + + + G P Y + D L +AG KA++L++ M ++P+ + +
Sbjct: 431 EDAVEILNQLSS-KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS 489
Query: 417 LLGASHVHGNPDVAEIVSRHLFE---LEPNNI 445
L+G G D A I H FE + PN +
Sbjct: 490 LVGGLSREGKVDEA-IKFFHEFERMGIRPNAV 520
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 151/349 (43%), Gaps = 22/349 (6%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN---LTLGTQL 130
P+ Y+ LI A A++L MR++ TP T++ L + + L +
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYAR 186
G ++ +N +++ +G A K+ +M ++ VV++ LI R
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 187 NGDMNSARELFDELDV----KDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
G + A ++ +++ + +++ ++ G+ + A+E+ + G D VT
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
++A + G +DA + S G P ++ + ++D +K G +A +
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPV--LITYNTVIDGLAKAGKTGKAIKLLDE 474
Query: 303 MKERN----AFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGL 358
M+ ++ TYSS++ G + G+ AIK F+E I+PN VTF +++ +
Sbjct: 475 MRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQ 534
Query: 359 VDQGQ--YLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM 405
D+ +F GC P+ Y + + L G ++AL+L+ +
Sbjct: 535 TDRAIDFLVFMINRGCK---PNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 157/368 (42%), Gaps = 29/368 (7%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT-NLTLGTQLH 131
SP+ Y+ ++R+ G +A+ + M + P T++ L A + +G H
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG---H 257
Query: 132 AHALL-----LGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMP----QRDVVSWTELIT 182
A LL G D+ N ++ K G LD A K ++MP Q +V++ ++
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 183 AYARNGDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET 238
+ G A +L ++ K V + ++ + + A++ + + G +
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 239 DEVTLAGAISA-CAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAY 297
+ ++ + C + + +++ + S G P +++ + ++ K G VE+A
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMV-SRGCYP--DIVTYNTMLTALCKDGKVEDAV 434
Query: 298 NVFRGMKERNA----FTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVAC 353
+ + + TY+++I G A G+ AIKL EM ++KP+ +T+ ++
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Query: 354 THAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM---PVEPN 410
+ G VD+ F E G+ P+A + + L ++ ++A+ + M +PN
Sbjct: 495 SREGKVDEAIKFFHEFER-MGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPN 553
Query: 411 GAVWGALL 418
+ L+
Sbjct: 554 ETSYTILI 561
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 157/379 (41%), Gaps = 30/379 (7%)
Query: 138 GFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYARNGDMNSA 193
G DI T+I+ + + G A K+ + + DV+++ +I+ Y + G++N+A
Sbjct: 132 GNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNA 191
Query: 194 RELFDELDVK-DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISA-CA 251
+ D + V D V + ++ + K+A+E + + D +T I A C
Sbjct: 192 LSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 252 QLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK----ERN 307
G ++ + E G +V+ + LV+ K G ++EA M + N
Sbjct: 252 DSGV---GHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
Query: 308 AFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFS 367
T++ ++ GR A KL +ML P+ VTF ++ GL+ + +
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368
Query: 368 NMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVE---PNGAVWGALLGASHVH 424
M +G P++ Y + + +++A++ +E M P+ + +L A
Sbjct: 369 KMPQ-HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427
Query: 425 GN-PDVAEIVSRHLFELEPNNIGNYLLLSNT----YASAGRWDDVSRVRKLMRDKNLKKN 479
G D EI L +L L+ NT A AG+ ++ MR K+LK +
Sbjct: 428 GKVEDAVEI----LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPD 483
Query: 480 P-GYSWVE---SRNGVIHE 494
YS + SR G + E
Sbjct: 484 TITYSSLVGGLSREGKVDE 502
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 149/364 (40%), Gaps = 53/364 (14%)
Query: 92 FTEALRLYTSMRNQRITPISFTFSALFSAVTNLT---LGTQLHAHALLLGFASDIFVNNT 148
F +A L+ M R P F+ + + + + + L+ LG + D++
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 149 MIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYARNGDMNSARELFDELD--- 201
+I + + L A + +M + +V+ L+ + + A L D +D
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 202 -VKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDAD 260
V + V + ++ G +N ALE F C+ + G+ D VT IS + G DA
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA- 238
Query: 261 WVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER----NAFTYSSMIV 316
R + + NV+ +AL+D + K GN+ EA N+++ M R N FTY+S+I
Sbjct: 239 -ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 317 GFAIHG-----------------------------------RARAAIKLFYEMLETEIKP 341
GF IHG R +KLF EM +
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 342 NHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQL 401
+ T+ ++ AG ++ Q +F+ M C GV P Y + D L G +EKAL +
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC-GVSPDIVTYNILLDCLCNNGKIEKALVM 416
Query: 402 VETM 405
VE +
Sbjct: 417 VEDL 420
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 13/216 (6%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSAL---FSAVTNLTLGTQL 130
PN F Y++LI + + G +A ++ M ++ P T++ L F + G +L
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 346
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQ----RDVVSWTELITAYAR 186
G D F NT+I Y ++G L+ A+KVF+ M D+V++ L+
Sbjct: 347 FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 406
Query: 187 NGDMNSARELFD-----ELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
NG + A + + E+DV D + + ++ G + KEA FR L G++ D +
Sbjct: 407 NGKIEKALVMVEDLQKSEMDV-DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAI 465
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNV 277
IS + G ++AD + + GF P+ +
Sbjct: 466 AYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 501
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 120/280 (42%), Gaps = 17/280 (6%)
Query: 79 YSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSAL---FSAVTNLTLGTQLHAHAL 135
Y+ LI + G +T+A RL M ++I P F+AL F NL L+ +
Sbjct: 222 YNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMI 281
Query: 136 LLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYARNGDMN 191
++F N++I + GCL A+ +FD M + DVV++ LIT + ++ +
Sbjct: 282 RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE 341
Query: 192 SARELFDELD----VKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAI 247
+LF E+ V D + ++ GY Q A + F + + G+ D VT +
Sbjct: 342 DGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILL 401
Query: 248 SACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER- 306
G + A + + + +++ + ++ + ++EA+ +FR + +
Sbjct: 402 DCLCNNGKIEKA--LVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG 459
Query: 307 ---NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNH 343
+A Y +MI G G R A KL M E P+
Sbjct: 460 VKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 499
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 169/408 (41%), Gaps = 66/408 (16%)
Query: 77 FLYSALIRAYTLRGPFTEALRLYTSMRNQRI-TPISFTFSALFSAVTNLTLGT--QLHAH 133
FL AL+ YT G +A++ + R R PI + L + GT +
Sbjct: 171 FLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYME 230
Query: 134 ALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR--------------------- 172
L GF +++V N ++ + K G + A+KVFDE+ +R
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 173 ------------------DVVSWTELITAYARNGDMNSARELFDELD----VKDKVAWTA 210
DV +++ LI A + M+ A LFDE+ + + V +T
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 211 MVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWV--RCIAES 268
++ G+++N E ++ + G++ D V ++ G K+ D V R I +
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN-----GFCKNGDLVAARNIVDG 405
Query: 269 ---SGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK----ERNAFTYSSMIVGFAIH 321
G P + + + L+D + + G+VE A + + M E + +S+++ G
Sbjct: 406 MIRRGLRPDK--ITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKE 463
Query: 322 GRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADH 381
GR A + EML IKP+ VT+ ++ A G G L M+ G VPS
Sbjct: 464 GRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQS-DGHVPSVVT 522
Query: 382 YACMADLLGRAGHLEKALQLVETM---PVEPNGAVWGALLGASHVHGN 426
Y + + L + G ++ A L++ M V P+ + LL H H N
Sbjct: 523 YNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN 570
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 133/295 (45%), Gaps = 21/295 (7%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHA 132
P ++ LI Y G E RL M R P FT+SAL +A+ A
Sbjct: 272 QPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKEN--KMDGA 329
Query: 133 HALL-----LGFASDIFVNNTMIKMYVKSGCLDSARKVFDEM----PQRDVVSWTELITA 183
H L G + + T+I + ++G +D ++ + +M Q D+V + L+
Sbjct: 330 HGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNG 389
Query: 184 YARNGDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETD 239
+ +NGD+ +AR + D + + DK+ +T ++ G+ + + ALE + + + G+E D
Sbjct: 390 FCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELD 449
Query: 240 EVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNV 299
V + + + G DA+ R + E G + + + ++D + K G+ + + +
Sbjct: 450 RVGFSALVCGMCKEGRVIDAE--RALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKL 507
Query: 300 FRGMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVL 350
+ M+ + TY+ ++ G G+ + A L ML + P+ +T+ +L
Sbjct: 508 LKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 155/364 (42%), Gaps = 21/364 (5%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHA 132
+P Y LI YT G ++AL + M+ + + T+S + + L A
Sbjct: 481 TPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFA 540
Query: 133 ---HALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQ----RDVVSWTELITAYA 185
+ G D+ + N +I + G +D A + EM + ++ +I YA
Sbjct: 541 VFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYA 600
Query: 186 RNGDMNSARELFDELD----VKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
++GDM + E+FD + V + ++ G + ++A+E + AG+ +E
Sbjct: 601 KSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEH 660
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
T + A +G + A ++ G ++ AL+ K G ++ A V +
Sbjct: 661 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDV--DIFTYEALLKACCKSGRMQSALAVTK 718
Query: 302 GMK----ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAG 357
M RN+F Y+ +I G+A G A L +M + +KP+ T+ + AC+ AG
Sbjct: 719 EMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAG 778
Query: 358 LVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMP---VEPNGAVW 414
+++ ME GV P+ Y + RA EKAL E M ++P+ AV+
Sbjct: 779 DMNRATQTIEEMEAL-GVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVY 837
Query: 415 GALL 418
LL
Sbjct: 838 HCLL 841
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 100/469 (21%), Positives = 188/469 (40%), Gaps = 58/469 (12%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHA 132
+P +Y++LI AY + EAL M+ + I T+S + + HA
Sbjct: 341 TPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAG-----HA 395
Query: 133 HALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNS 192
A F D A+++ + + + ++I A+ + +M
Sbjct: 396 EAADYWF--------------------DEAKRIHKTL---NASIYGKIIYAHCQTCNMER 432
Query: 193 ARELFDELDVKDKVA----WTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAIS 248
A L E++ + A + M+ GY A K+ L F+ L+E G VT I+
Sbjct: 433 AEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLIN 492
Query: 249 ACAQLGA-SKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER- 306
++G SK + R + E G N+ S +++ + K + A+ VF M +
Sbjct: 493 LYTKVGKISKALEVSRVMKEE---GVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549
Query: 307 ---NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQ 363
+ Y+++I F G AI+ EM + +P TF+ ++ +G + +
Sbjct: 550 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 609
Query: 364 YLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMP---VEPNGAVWGALL-G 419
+F M C G VP+ + + + L +EKA+++++ M V N + ++ G
Sbjct: 610 EVFDMMRRC-GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQG 668
Query: 420 ASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKN 479
+ V E +R E +I Y L +GR V K M +N+ +N
Sbjct: 669 YASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRN 728
Query: 480 PGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLPNL 528
+ V + + G + ++ E DL++++K G P++
Sbjct: 729 ---------SFVYNILIDGWARRGDVWEAA----DLIQQMKKEGVKPDI 764
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 104/247 (42%), Gaps = 38/247 (15%)
Query: 166 FDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVA----WTAMVTGYAQNAMP 221
F+++ + + ++ Y R GDM+ ARE F+ + + +T+++ YA
Sbjct: 301 FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDM 360
Query: 222 KEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGS 281
EAL R ++E G+E VT + + ++ G ++ AD+ E+ N +
Sbjct: 361 DEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADY--WFDEAKRIHKTLNASIYG 418
Query: 282 ALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKP 341
++ + + N+E A + R M+E A I +++ M++
Sbjct: 419 KIIYAHCQTCNMERAEALVREMEEEG----------------IDAPIAIYHTMMDGY--- 459
Query: 342 NHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQL 401
+VA GLV +F ++ C G P+ Y C+ +L + G + KAL++
Sbjct: 460 -------TMVADEKKGLV-----VFKRLKEC-GFTPTVVTYGCLINLYTKVGKISKALEV 506
Query: 402 VETMPVE 408
M E
Sbjct: 507 SRVMKEE 513
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 150/359 (41%), Gaps = 24/359 (6%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSAL---FSAVTNLTLGTQL 130
PN + YSA+I Y G +A LY + + P F L F L L
Sbjct: 267 PNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSL 326
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYAR 186
H + G +++V N +I + KSG + A + EM DV ++T LI
Sbjct: 327 FVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCI 386
Query: 187 NGDMNSARELFDELD----VKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
+ A LF ++ + +++ GY + ++AL+ + +G+E + +T
Sbjct: 387 EDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIIT 446
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
+ I + K A + G P +V+ +AL+D + K N++EA ++
Sbjct: 447 FSTLIDGYCNVRDIKAAMGLYFEMTIKGIVP--DVVTYTALIDAHFKEANMKEALRLYSD 504
Query: 303 MKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGL 358
M E N T++ ++ GF GR AI + E + NHV F ++ G
Sbjct: 505 MLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGY 564
Query: 359 VDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAVWGAL 417
+ + FS+M C G+ P Y M GHL++ ++ +TM ++ + G L
Sbjct: 565 ILRASRFFSDMRSC-GITPDICSYVSMLK-----GHLQEK-RITDTMMLQCDMIKTGIL 616
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 135/288 (46%), Gaps = 25/288 (8%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQL-HA 132
PN ++Y+ LI + G EA+ L + M + ++P FT++ L + L + Q+ A
Sbjct: 337 PNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTIL---INGLCIEDQVAEA 393
Query: 133 HALLLGFASD-IFVN----NTMIKMYVKSGCLDSARKVFDEMP----QRDVVSWTELITA 183
+ L ++ IF + N++I Y K ++ A + EM + ++++++ LI
Sbjct: 394 NRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDG 453
Query: 184 YARNGDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETD 239
Y D+ +A L+ E+ +K D V +TA++ + + A KEAL + + EAG+ +
Sbjct: 454 YCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPN 513
Query: 240 EVTLAGAISACAQLG-ASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYN 298
+ T A + + G S D+ + E++ N + + L++ + G + A
Sbjct: 514 DHTFACLVDGFWKEGRLSVAIDFYQ---ENNQQRSCWNHVGFTCLIEGLCQNGYILRASR 570
Query: 299 VFRGMKE----RNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPN 342
F M+ + +Y SM+ G R + L +M++T I PN
Sbjct: 571 FFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPN 618
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 103/270 (38%), Gaps = 48/270 (17%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSAL---FSAVTNLTLGTQ 129
SP+ F Y+ LI + EA RL+ M+N+RI P S T+++L + N+
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALD 430
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYA 185
L + G +I +T+I Y + +A ++ EM + DVV++T LI A+
Sbjct: 431 LCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHF 490
Query: 186 RNGDMNSARELFDEL---------------------------------------DVKDKV 206
+ +M A L+ ++ + V
Sbjct: 491 KEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHV 550
Query: 207 AWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIA 266
+T ++ G QN A FF +R G+ D + + Q D ++C
Sbjct: 551 GFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDM 610
Query: 267 ESSGFGPARNVLVGSALVDMYSKCGNVEEA 296
+G P N+LV L Y G V+ A
Sbjct: 611 IKTGILP--NLLVNQLLARFYQANGYVKSA 638
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 263 RCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER----NAFTYSSMIVGF 318
+ + E + G NV + + + + +EEA +F MK+ N +TYS+MI G+
Sbjct: 220 KLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGY 279
Query: 319 AIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVA--CTHAGLVDQGQYLFSNMEGCYGVV 376
G R A L+ E+L E+ PN V F G LV C LV + LF +M +GV
Sbjct: 280 CKTGNVRQAYGLYKEILVAELLPNVVVF-GTLVDGFCKARELV-TARSLFVHMVK-FGVD 336
Query: 377 PSADHYACMADLLGRAGHLEKALQLV---ETMPVEPNGAVWGALLGA 420
P+ Y C+ ++G++ +A+ L+ E++ + P+ + L+
Sbjct: 337 PNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILING 383
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 141/305 (46%), Gaps = 20/305 (6%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSAL---FSAVTNLTLGTQ 129
+PN ++ALI A+ G F EA +LY M + I P FT+++L F L Q
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYA 185
+ + D+ NT+IK + KS ++ ++F EM R D V++T LI
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 186 RNGDMNSARELFDELDVKDKV-----AWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
+GD ++A+++F ++ V D V ++ ++ G N ++ALE F ++++ ++ D
Sbjct: 447 HDGDCDNAQKVFKQM-VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
I + G D + C G P NV+ + ++ ++EAY +
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP--NVVTYNTMISGLCSKRLLQEAYALL 563
Query: 301 RGMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHA 356
+ MKE N+ TY+++I G A+ +L EM + T +G++ H
Sbjct: 564 KKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST-IGLVANMLHD 622
Query: 357 GLVDQ 361
G +D+
Sbjct: 623 GRLDK 627
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 145/347 (41%), Gaps = 48/347 (13%)
Query: 94 EALRLYTSMRNQRITPISFTFSALFSAVTNL---TLGTQLHAHALLLGFASDIFVNNTMI 150
+AL L+ M + I P T+S+L S + + + +QL + + ++ N +I
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 337
Query: 151 KMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYARNGDMNSARELFDELDVKD-- 204
+VK G A K++D+M +R D+ ++ L+ + + ++ A+++F+ + KD
Sbjct: 338 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 397
Query: 205 --KVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWV 262
V + ++ G+ ++ ++ E FR + G+ D VT I G +A V
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 263 RCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHG 322
S G P + TYS ++ G +G
Sbjct: 458 FKQMVSDGVPP---------------------------------DIMTYSILLDGLCNNG 484
Query: 323 RARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHY 382
+ A+++F M ++EIK + + ++ AG VD G LF ++ GV P+ Y
Sbjct: 485 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS-LKGVKPNVVTY 543
Query: 383 ACMADLLGRAGHLEKALQLVETMPVE---PNGAVWGALLGASHVHGN 426
M L L++A L++ M + PN + L+ A G+
Sbjct: 544 NTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 167/406 (41%), Gaps = 22/406 (5%)
Query: 77 FLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN---LTLGTQLHAH 133
+ Y+ LI + R + AL L M P T S+L + + ++ L
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 134 ALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYARNGD 189
+ +G+ D T+I A + D M QR ++V++ ++ + GD
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 190 MNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
+ A L ++++ D V + ++ + +AL F+ + G+ + VT +
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 246 AISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE 305
IS G DA + P N++ +AL+D + K G EA ++ M +
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINP--NLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 306 R----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
R + FTY+S++ GF +H R A ++F M+ + P+ VT+ ++ + V+
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 362 GQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM---PVEPNGAVWGALL 418
G LF M G+V Y + L G + A ++ + M V P+ + LL
Sbjct: 419 GTELFREMSH-RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Query: 419 GASHVHGNPDVAEIVSRHLFELEPN-NIGNYLLLSNTYASAGRWDD 463
+G + A V ++ + E +I Y + AG+ DD
Sbjct: 478 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 149/346 (43%), Gaps = 26/346 (7%)
Query: 79 YSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNL-------TLGTQLH 131
Y ++R +A+ L+ M R P F+ L SA+ + +LG ++
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 132 AHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMP----QRDVVSWTELITAYARN 187
++ G ++ N +I + + + A + +M + +V+ + L+ Y
Sbjct: 113 RLEIVHG----LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 188 GDMNSARELFDELDV----KDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTL 243
++ A L D++ D + +T ++ G + EA+ + + G + + VT
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 244 AGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGM 303
++ + G + A + + + +V++ + ++D K +V++A N+F+ M
Sbjct: 229 GVVVNGLCKRGDTDLA--LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
Query: 304 KER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLV 359
+ + N TYSS+I +GR A +L +M+E +I PN VTF ++ A G
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346
Query: 360 DQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM 405
+ + L+ +M + P Y + + L+KA Q+ E M
Sbjct: 347 VEAEKLYDDMIK-RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM 391
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 166/372 (44%), Gaps = 24/372 (6%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL---GTQ 129
SPN +Y+ LI +G +A L+ M + T++ L + + + G +
Sbjct: 195 SPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFE 254
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYA 185
++ G +++ N ++ K G A +VFDEM +R ++V++ LI
Sbjct: 255 MYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLC 314
Query: 186 RNGDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
R +N A ++ D++ + + + ++ G+ +AL R L+ G+ V
Sbjct: 315 REMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLV 374
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
T +S + G + A + E G P++ + + L+D +++ N+E+A +
Sbjct: 375 TYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK--VTYTILIDTFARSDNMEKAIQLRL 432
Query: 302 GMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAG 357
M+E + TYS +I GF I G+ A +LF M+E +PN V + +++ G
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Query: 358 LVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM---PVEPNGAVW 414
+ L ME + P+ Y M ++L + ++A +LVE M ++P+ ++
Sbjct: 493 SSYRALKLLKEMEE-KELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSIL 551
Query: 415 GALLGA---SHV 423
+ A SHV
Sbjct: 552 SLISRAKNDSHV 563
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 161/357 (45%), Gaps = 21/357 (5%)
Query: 137 LGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVV----SWTELITAYARNGDMNS 192
GF+ ++ + T+I K G ++ A+ +F EM + +V ++T LI +NG
Sbjct: 192 FGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQ 251
Query: 193 ARELFDELDVKDKV-----AWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAI 247
E+++++ +D V + ++ ++ K+A + F +RE G+ + VT I
Sbjct: 252 GFEMYEKMQ-EDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLI 310
Query: 248 SACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER- 306
+ +A+ V +S G P N++ + L+D + G + +A ++ R +K R
Sbjct: 311 GGLCREMKLNEANKVVDQMKSDGINP--NLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368
Query: 307 ---NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQ 363
+ TY+ ++ GF G A K+ EM E IKP+ VT+ ++ + +++
Sbjct: 369 LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428
Query: 364 YLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM---PVEPNGAVWGALLGA 420
L +ME G+VP Y+ + G + +A +L ++M EPN ++ ++
Sbjct: 429 QLRLSMEE-LGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILG 487
Query: 421 SHVHGNPDVAEIVSRHLFELE-PNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNL 476
G+ A + + + E E N+ +Y + + + R+ + M D +
Sbjct: 488 YCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/465 (21%), Positives = 183/465 (39%), Gaps = 59/465 (12%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT---NLTLGTQL 130
P+ Y+ LI AY+ +G EA L +M + +P +T++ + + + ++
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDV----VSWTELITAYAR 186
A L G + D +++ K G + KVF +M RDV V ++ +++ + R
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 187 NGDMNSARELFDELD----VKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
+G+++ A F+ + + D V +T ++ GY + M A+ + + G D VT
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
+ + +AD + P L + L+D + K GN++ A +F+
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTL--TILIDGHCKLGNLQNAMELFQK 505
Query: 303 MKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTF---VGVLVACTH 355
MKE+ + TY++++ GF G A +++ +M+ EI P +++ V L + H
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGH 565
Query: 356 --------------------------------AGLVDQGQYLFSNMEGCYGVVPSADHYA 383
+G G+ M G VP Y
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMIS-EGFVPDCISYN 624
Query: 384 CMADLLGRAGHLEKALQLVETMPVEPNGAVWGALLGASHVHG-----NPDVAEIVSRHLF 438
+ R ++ KA LV+ M E G V S +HG AE+V R +
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Query: 439 ELEPN-NIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGY 482
E N + Y + N + S + R+ M + + +
Sbjct: 685 ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDKF 729
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 150/372 (40%), Gaps = 64/372 (17%)
Query: 106 RITPISFTFSALFSAVTNLTLGTQLHAHALLLGFASDIFVNNT-----MIKMYVKSGCLD 160
R+ P++ L+ +LTLG + LGF F + + MI + V+SG L
Sbjct: 75 RLNPLAVV-EVLYRCRNDLTLGQRFVDQ---LGFHFPNFKHTSLSLSAMIHILVRSGRLS 130
Query: 161 SARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELDVKDKVAWTAMVTGYAQNAM 220
A+ M +R VS E++ NS F D V + ++ Y Q
Sbjct: 131 DAQSCLLRMIRRSGVSRLEIV---------NSLDSTFSNCGSNDSV-FDLLIRTYVQARK 180
Query: 221 PKEALEFFRCLREAGMET-------------------------DEVTLAGA--------- 246
+EA E F LR G E++ +G
Sbjct: 181 LREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNI 240
Query: 247 -ISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE 305
++A + G + + G P +++ + L+ YS G +EEA+ + M
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYP--DIVTYNTLISAYSSKGLMEEAFELMNAMPG 298
Query: 306 RN----AFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
+ +TY+++I G HG+ A ++F EML + + P+ T+ +L+ G V +
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVE 358
Query: 362 GQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQL---VETMPVEPNGAVWGALL 418
+ +FS+M VVP ++ M L R+G+L+KAL V+ + P+ ++ L+
Sbjct: 359 TEKVFSDMRS-RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417
Query: 419 GASHVHGNPDVA 430
G VA
Sbjct: 418 QGYCRKGMISVA 429
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 149/333 (44%), Gaps = 37/333 (11%)
Query: 171 QRDVVSWTELITAYARNGDMNSAR--ELFDELDVKDKVAWTA-----MVTGYAQNAMPKE 223
Q D V+++ +I + R+ ++S L+ E++ +DK+ ++ G+A++ P +
Sbjct: 229 QSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIE-RDKLELDVQLVNDIIMGFAKSGDPSK 287
Query: 224 ALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSAL 283
AL+ + G+ TL ISA A G + +A+ + SG P +AL
Sbjct: 288 ALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY--NAL 345
Query: 284 VDMYSKCGNVEEAYNVFRGMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEI 339
+ Y K G +++A ++ M++R + TYS +I + GR +A + EM ++
Sbjct: 346 LKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDV 405
Query: 340 KPNHVTFVGVLVACTHAGLVDQGQY-----LFSNMEGCYGVVPSADHYACMADLLGRAGH 394
+PN F +L AG D+G++ + M+ GV P Y + D G+
Sbjct: 406 QPNSFVFSRLL-----AGFRDRGEWQKTFQVLKEMKSI-GVKPDRQFYNVVIDTFGKFNC 459
Query: 395 LEKALQLVETM---PVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNN-----IG 446
L+ A+ + M +EP+ W L+ HG IV+ +FE
Sbjct: 460 LDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR----HIVAEEMFEAMERRGCLPCAT 515
Query: 447 NYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKN 479
Y ++ N+Y RWDD+ R+ M+ + + N
Sbjct: 516 TYNIMINSYGDQERWDDMKRLLGKMKSQGILPN 548
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 146/378 (38%), Gaps = 19/378 (5%)
Query: 12 VVSILNTCTTLRRAKQLHAHIYRHNLHQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQV 71
++S L A+ L + + + + LL+ T P S + +
Sbjct: 310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 369
Query: 72 PSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN---LTLGT 128
SP+ YS LI AY G + A + M + P SF FS L + +
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 129 QLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEM----PQRDVVSWTELITAY 184
Q+ +G D N +I + K CLD A FD M + D V+W LI +
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 489
Query: 185 ARNGDMNSARELFDELDVKD----KVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
++G A E+F+ ++ + + M+ Y + ++ G+ +
Sbjct: 490 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 549
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
VT + + G DA + C+ E G + + +AL++ Y++ G E+A N F
Sbjct: 550 VTHTTLVDVYGKSGRFNDA--IECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF 607
Query: 301 RGMK----ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHA 356
R M + + +S+I F R A + M E +KP+ VT+ ++ A
Sbjct: 608 RVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRV 667
Query: 357 GLVDQGQYLFSN--MEGC 372
+ ++ M GC
Sbjct: 668 DKFQKVPVVYEEMIMSGC 685
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 176/422 (41%), Gaps = 33/422 (7%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT---NLTLGTQL 130
P+ S LI L+G +EAL L M P T+ + + + N L L
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYAR 186
+ + + +I K G D A +F+EM + DVV+++ LI
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 187 NGDMNSA----RELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
+G + RE+ + D V ++A++ + + EA E + + G+ D +T
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 352
Query: 243 LAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
I + +A+ + + S G P +++ S L++ Y K V++ +FR
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKGCEP--DIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 303 MKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGL 358
+ + N TY+++++GF G+ AA +LF EM+ + P+ VT+ +L G
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 359 VDQGQYLFSNME--------GCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPN 410
+++ +F M+ G Y ++ H C A + A L +L V+P+
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIII---HGMCNASKVDDAWSLFCSLS---DKGVKPD 524
Query: 411 GAVWGALLGASHVHGNPDVAEIVSRHLFE--LEPNNIGNYLLLSNTYASAGRWDDVSRVR 468
+ ++G G+ A+++ R + E P++ +L+ +G V +
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIE 584
Query: 469 KL 470
++
Sbjct: 585 EM 586
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 114/484 (23%), Positives = 214/484 (44%), Gaps = 48/484 (9%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQ-RITPISFTFSALFSAVTNLTLGTQLH 131
S +P ++ +++ Y +G AL ++ +M N RI + S L + V LH
Sbjct: 152 SFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALH 211
Query: 132 AHALLLGF--ASDIFVNNTMIKMYVKSGCLDSARKVFDEMP-----QRDVVSWTELITAY 184
+ ++ F + D+F + ++ Y +SG +D A E + +VV++ LI Y
Sbjct: 212 VYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGY 271
Query: 185 ARNGD---MNSARELFDELDV-KDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
A GD M L E V ++ V +T+++ GY + + +EA F L+E + D+
Sbjct: 272 AMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQ 331
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
+ + G +DA VR G N + ++L++ Y K G + EA +F
Sbjct: 332 HMYGVLMDGYCRTGQIRDA--VRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIF 389
Query: 301 RGMKE----RNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHA 356
M + + TY++++ G+ G A+KL +M + E+ P +T+ +L +
Sbjct: 390 SRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRI 449
Query: 357 GLVDQGQYLFSNMEGCYGVVPSADHYAC--MADLLGRAGHLEKALQLVE--------TMP 406
G L+ M GV +AD +C + + L + G +A++L E T
Sbjct: 450 GAFHDVLSLWKMMLK-RGV--NADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDT 506
Query: 407 VEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPNNIGNYLLLSNTYASAGRWDDVSR 466
+ N + G L V+ ++ + V ++F +P + Y LS+ Y G +
Sbjct: 507 ITLNVMISG-LCKMEKVNEAKEILDNV--NIFRCKP-AVQTYQALSHGYYKVGNLKEAFA 562
Query: 467 VRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKKALDDLLERLKAIGYLP 526
V++ M K + + +E N +I +G K+ +N++ DL+ L+A G P
Sbjct: 563 VKEYMERKGI-----FPTIEMYNTLI----SGAFKYRHLNKVA----DLVIELRARGLTP 609
Query: 527 NLSS 530
+++
Sbjct: 610 TVAT 613
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 149/344 (43%), Gaps = 20/344 (5%)
Query: 78 LYSALIRAYTLRGPFTEALRLYTSMRNQRI---TPISFTFSALFSAVTNLTLGTQLHAHA 134
+Y L+ Y G +A+R++ +M + T I + + L Q+ +
Sbjct: 333 MYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRM 392
Query: 135 LLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVV----SWTELITAYARNGDM 190
D NT++ Y ++G +D A K+ D+M Q++VV ++ L+ Y+R G
Sbjct: 393 NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAF 452
Query: 191 NSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGA 246
+ L+ + + D+++ + ++ + EA++ + + G+ TD +TL
Sbjct: 453 HDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVM 512
Query: 247 ISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER 306
IS ++ +A + + + F V AL Y K GN++EA+ V M+ +
Sbjct: 513 ISGLCKMEKVNEAKEI--LDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERK 570
Query: 307 NAF----TYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQG 362
F Y+++I G + L E+ + P T+ ++ + G++D+
Sbjct: 571 GIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKA 630
Query: 363 -QYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM 405
F +E G+ + + + +A+ L R +++A L++ +
Sbjct: 631 YATCFEMIEK--GITLNVNICSKIANSLFRLDKIDEACLLLQKI 672
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 100/466 (21%), Positives = 180/466 (38%), Gaps = 69/466 (14%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSAL---FSAVTNLTLGTQ 129
P+ Y+ L+ Y G EAL+L M + + P T++ L +S +
Sbjct: 398 KPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLS 457
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYA 185
L L G +D +T+++ K G + A K+++ + R D ++ +I+
Sbjct: 458 LWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLC 517
Query: 186 RNGDMNSARELFDELDV---KDKV-AWTAMVTGYAQNAMPKEALEFFRCLREAGM----E 237
+ +N A+E+ D +++ K V + A+ GY + KEA + G+ E
Sbjct: 518 KMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIE 577
Query: 238 TDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAY 297
++GA +K AD V E G V AL+ + G +++AY
Sbjct: 578 MYNTLISGAFK---YRHLNKVADLV---IELRARGLTPTVATYGALITGWCNIGMIDKAY 631
Query: 298 -----------------------NVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEM 334
++FR K A IV F + ++K F E
Sbjct: 632 ATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEA 691
Query: 335 -----LETE--------------IKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGV 375
L+T+ + PN++ + + AG ++ + LFS++
Sbjct: 692 SATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRF 751
Query: 376 VPSADHYACMADLLGRAGHLEKALQLVETMPVE---PNGAVWGALLGASHVHGNPDVAEI 432
+P Y + AG + KA L + M ++ PN + AL+ GN D A+
Sbjct: 752 IPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQR 811
Query: 433 VSRHLFE--LEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNL 476
+ L + + PN I Y L + +G + R+++ M +K L
Sbjct: 812 LLHKLPQKGITPNAI-TYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 182/429 (42%), Gaps = 65/429 (15%)
Query: 76 PFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHAHAL 135
P+ ++ LI Y +G F +A + M N I P + T++ A+ + G A L
Sbjct: 308 PYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDF--GRIDDAREL 365
Query: 136 LLGFAS-DIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDV----VSWTELITAYARNGDM 190
L A+ D+ NT++ Y+K G A +FD++ D+ V++ LI +G++
Sbjct: 366 LSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 425
Query: 191 NSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGA 246
A+ L +E+ + D + +T +V G+ +N A E + + G++ D
Sbjct: 426 EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTR 485
Query: 247 ISACAQLGASKDADWVRCIAESSGFGP-ARNVLVGSALVDMYSKCGN----VEEAYNVFR 301
+LG S A R E A ++ + + +D K GN +E +FR
Sbjct: 486 AVGELRLGDSDKA--FRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFR 543
Query: 302 GMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
+ TY+++I G+ +G+ + A L+ EML + P+ +T+ ++ HA
Sbjct: 544 VGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYG--HA----- 596
Query: 362 GQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMP---VEPNGAVWGALL 418
+AG LE+A Q M V PN ALL
Sbjct: 597 -----------------------------KAGRLEQAFQYSTEMKKRGVRPNVMTHNALL 627
Query: 419 GASHVHGNPDVAEIVSRHLFELE----PNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDK 474
GN D A R+L ++E P N +Y +L + +W++V ++ K M DK
Sbjct: 628 YGMCKAGNIDEA---YRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDK 684
Query: 475 NLKKNPGYS 483
++ + GY+
Sbjct: 685 EIEPD-GYT 692
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 132/332 (39%), Gaps = 53/332 (15%)
Query: 65 RLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT-- 122
R L S + +P+ Y+ L+ Y G F EA L+ +R I P T++ L +
Sbjct: 363 RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCES 422
Query: 123 -NLTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSW 177
NL +L D+ T++K +VK+G L A +V+DEM ++ D ++
Sbjct: 423 GNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAY 482
Query: 178 TELITAYARNGDMNSARELFDELD------------------------------------ 201
T R GD + A L +E+
Sbjct: 483 TTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIF 542
Query: 202 ----VKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASK 257
V D V +T ++ GY +N K A + + + +T I A+ G +
Sbjct: 543 RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLE 602
Query: 258 DADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER----NAFTYSS 313
A + G P NV+ +AL+ K GN++EAY M+E N ++Y+
Sbjct: 603 QAFQYSTEMKKRGVRP--NVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTM 660
Query: 314 MIVGFAIHGRARAAIKLFYEMLETEIKPNHVT 345
+I + +KL+ EML+ EI+P+ T
Sbjct: 661 LISKNCDFEKWEEVVKLYKEMLDKEIEPDGYT 692
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 156/391 (39%), Gaps = 53/391 (13%)
Query: 138 GFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDV----VSWTELITAYARNGDMNSA 193
G + NTM+ K+G L+ K++ EM +R++ V++ LI +++NG M A
Sbjct: 233 GIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEA 292
Query: 194 RELFDELD----VKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISA 249
R ++ ++ ++ GY + + +A + AG+ T I A
Sbjct: 293 RRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICA 352
Query: 250 CAQLGASKDA----------DWV-------------RCIAESSGFGPAR------NVLVG 280
G DA D V + + S F R +++
Sbjct: 353 LCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTY 412
Query: 281 SALVDMYSKCGNVEEAYNVFRGMKERNAF----TYSSMIVGFAIHGRARAAIKLFYEMLE 336
+ L+D + GN+E A + M + F TY++++ GF +G A +++ EML
Sbjct: 413 NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLR 472
Query: 337 TEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLE 396
IKP+ + V G D+ L M P Y D L + G+L
Sbjct: 473 KGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLV 532
Query: 397 KALQL---VETMPVEPNGAVWGALLGASHVHGNPDVA-----EIVSRHLFELEPNNIGNY 448
KA++ + + + P+ + ++ +G +A E++ + L+ P+ I Y
Sbjct: 533 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLY---PSVI-TY 588
Query: 449 LLLSNTYASAGRWDDVSRVRKLMRDKNLKKN 479
+L +A AGR + + M+ + ++ N
Sbjct: 589 FVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 619
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 144/346 (41%), Gaps = 56/346 (16%)
Query: 78 LYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSA---VTNLT--LGTQLHA 132
+Y+A++ Y+ G F++A L +MR + P +F+ L +A LT L +L
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 133 HALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMP----QRDVVSWTELITAYARNG 188
G D NT++ + LD A KVF++M Q D+ ++ +I+ Y R G
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCG 346
Query: 189 DMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLA 244
A LF EL++K D V + +++ +A+ ++ E ++ +++ G DE+T
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTY- 405
Query: 245 GAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK 304
+ ++ MY K G ++ A +++ MK
Sbjct: 406 ------------------------------------NTIIHMYGKQGQLDLALQLYKDMK 429
Query: 305 -----ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLV 359
+A TY+ +I R A L EML+ IKP T+ ++ AG
Sbjct: 430 GLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKR 489
Query: 360 DQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM 405
++ + FS M G P Y+ M D+L R KA L M
Sbjct: 490 EEAEDTFSCMLRS-GTKPDNLAYSVMLDVLLRGNETRKAWGLYRDM 534
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 163/392 (41%), Gaps = 62/392 (15%)
Query: 143 IFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYARNGDMNSARELFD 198
+ V N M+ +Y +SG A+++ D M QR D++S+ LI A ++G +
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLT------- 277
Query: 199 ELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKD 258
P A+E +R +G+ D +T +SAC S+D
Sbjct: 278 ----------------------PNLAVELLDMVRNSGLRPDAITYNTLLSAC-----SRD 310
Query: 259 ADW---VRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER----NAFTY 311
++ V+ + ++ +A++ +Y +CG EA +F ++ + +A TY
Sbjct: 311 SNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTY 370
Query: 312 SSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEG 371
+S++ FA +++ +M + + +T+ ++ G +D L+ +M+G
Sbjct: 371 NSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKG 430
Query: 372 CYGVVPSADHYACMADLLGRAGHLEKALQLVETM---PVEPNGAVWGALLGASHVHGNPD 428
G P A Y + D LG+A +A L+ M ++P + AL+ G +
Sbjct: 431 LSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKRE 490
Query: 429 VAEIVSRHLFE--LEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDK-NLKKNPGYSWV 485
AE + +P+N+ ++L R ++ + L RD + P Y+
Sbjct: 491 EAEDTFSCMLRSGTKPDNLAYSVMLDVLL----RGNETRKAWGLYRDMISDGHTPSYTLY 546
Query: 486 ESRNGVIHEFLAGDVKHPEINEIKKALDDLLE 517
E + G +K ++I+K + D+ E
Sbjct: 547 EL-------MILGLMKENRSDDIQKTIRDMEE 571
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSAL---FSAVTNLTLGTQL 130
P+ + Y+A+I Y G EA RL+ + + P + T+++L F+ N ++
Sbjct: 330 PDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEV 389
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMP-----QRDVVSWTELITAYA 185
+ +GF D NT+I MY K G LD A +++ +M D +++T LI +
Sbjct: 390 YQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLG 449
Query: 186 RNGDMNSARELFDE-LDVKDK---VAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
+ A L E LDV K ++A++ GYA+ +EA + F C+ +G + D +
Sbjct: 450 KANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNL 509
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 136/319 (42%), Gaps = 18/319 (5%)
Query: 138 GFASDIFVNNTMIKMYVKSGCLDSARKVFDEM----PQRDVVSWTELITAYARNGDMNSA 193
G D+ N+++ Y + GC + AR +F+ M P V S L+ A +G +
Sbjct: 782 GRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEEL 841
Query: 194 RELFDEL-DVKDKVAWTA---MVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISA 249
+ +EL D+ K++ ++ M+ +A+ E + + ++ AG I
Sbjct: 842 YVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIEL 901
Query: 250 CAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER--- 306
+ +DA+ + E + F + + ++++ MY+ + ++ V++ +KE
Sbjct: 902 LCKGKRVRDAEIMVSEMEEANFKV--ELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLE 959
Query: 307 -NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYL 365
+ TY+++I+ + R L +M + P T+ ++ A ++Q + L
Sbjct: 960 PDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQL 1019
Query: 366 FSNMEGCYGVVPSADHYACMADLLGRAG---HLEKALQLVETMPVEPNGAVWGALLGASH 422
F + G+ Y M + +G EK LQ+++ +EP A L+ +
Sbjct: 1020 FEELLS-KGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYS 1078
Query: 423 VHGNPDVAEIVSRHLFELE 441
GNP AE V +L + E
Sbjct: 1079 SSGNPQEAEKVLSNLKDTE 1097
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 179/416 (43%), Gaps = 54/416 (12%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHAH 133
P+ ++ L+ A G F EA MR+Q I P LH +
Sbjct: 361 PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP-------------------NLHTY 401
Query: 134 ALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDV----VSWTELITAYARNGD 189
NT+I ++ LD A ++F M V ++ I Y ++GD
Sbjct: 402 -------------NTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448
Query: 190 MNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
SA E F+++ K + VA A + A+ +EA + F L++ G+ D VT
Sbjct: 449 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 508
Query: 246 AISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE 305
+ +++G +A ++ ++E G +V+V ++L++ K V+EA+ +F MKE
Sbjct: 509 MMKCYSKVGEIDEA--IKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKE 566
Query: 306 R----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVL-VACTHAGLVD 360
TY++++ G +G+ + AI+LF M++ PN +TF + C + +
Sbjct: 567 MKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTL 626
Query: 361 QGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMP--VEPNGAVWGALL 418
+ LF M+ G VP Y + L + G +++A+ M V P+ LL
Sbjct: 627 ALKMLFKMMD--MGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLL 684
Query: 419 -GASHVHGNPDVAEIVSRHLFEL--EPNNIGNYLLLSNTYASAGRWDDVSRVRKLM 471
G D +I++ L+ +P N+ L+ + A AG + VS +L+
Sbjct: 685 PGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLV 740
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 159/367 (43%), Gaps = 31/367 (8%)
Query: 75 NPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHAHA 134
N + Y+ LI TEA+ +Y M + P T+S+L + LG + +
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLM-----VGLGKRRDIDS 241
Query: 135 LL--------LGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELIT 182
++ LG +++ I++ ++G ++ A ++ M DVV++T LI
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 183 AYARNGDMNSARELFDELDV----KDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET 238
A ++ A+E+F+++ D+V + ++ ++ N +F+ + + G
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361
Query: 239 DEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYN 298
D VT + A + G +A + G P N+ + L+ + +++A
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP--NLHTYNTLICGLLRVHRLDDALE 419
Query: 299 VFRGMK----ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACT 354
+F M+ + A+TY I + G + +A++ F +M I PN V L +
Sbjct: 420 LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLA 479
Query: 355 HAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM---PVEPNG 411
AG + + +F ++ G+VP + Y M + G +++A++L+ M EP+
Sbjct: 480 KAGRDREAKQIFYGLKD-IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDV 538
Query: 412 AVWGALL 418
V +L+
Sbjct: 539 IVVNSLI 545
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 153/362 (42%), Gaps = 27/362 (7%)
Query: 149 MIKMYVKSGCLDSARKVFDEMP-----QRDVVSWTELITAYARNGDMNSARELFDELD-- 201
+I+ K + AR +F++ Q + ++ LI + A+++F ++
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 202 --VKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDA 259
+ D + ++ Y ++ E E ++ + E + +T IS + G DA
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 260 -DWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER----NAFTYSSM 314
D + F P L+D SK G + EA +F GM + N Y+ +
Sbjct: 875 LDLYYDLMSDRDFSPT--ACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNIL 932
Query: 315 IVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVAC-THAGLVDQGQYLFSNMEGCY 373
I GF G A AA LF M++ ++P+ T+ VLV C G VD+G + F ++
Sbjct: 933 INGFGKAGEADAACALFKRMVKEGVRPDLKTY-SVLVDCLCMVGRVDEGLHYFKELKES- 990
Query: 374 GVVPSADHYACMADLLGRAGHLEKALQLVETMP----VEPNGAVWGALLGASHVHGNPDV 429
G+ P Y + + LG++ LE+AL L M + P+ + +L+ + G +
Sbjct: 991 GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1050
Query: 430 AEIVSRHLFE--LEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPG-YSWVE 486
A + + LEP N+ + L Y+ +G+ + V + M N G Y +
Sbjct: 1051 AGKIYNEIQRAGLEP-NVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLP 1109
Query: 487 SR 488
+R
Sbjct: 1110 NR 1111
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 129/307 (42%), Gaps = 35/307 (11%)
Query: 67 LFSQVPS----PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT 122
+F QV S P+ Y+ L+ AY G E LY M + T + + S +
Sbjct: 807 VFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGL- 865
Query: 123 NLTLGTQLHAHALLLGFASDIFVNNT------MIKMYVKSGCLDSARKVFDEM----PQR 172
+ G A L SD + T +I KSG L A+++F+ M +
Sbjct: 866 -VKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP 924
Query: 173 DVVSWTELITAYARNGDMNSARELFDELDVKDKV-----AWTAMVTGYAQNAMPKEALEF 227
+ + LI + + G+ ++A LF + VK+ V ++ +V E L +
Sbjct: 925 NCAIYNILINGFGKAGEADAACALFKRM-VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 983
Query: 228 FRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCI----AESSGFGPARNVLVGSAL 283
F+ L+E+G+ D V I+ LG S + + S G P ++ ++L
Sbjct: 984 FKELKESGLNPDVVCYNLIING---LGKSHRLEEALVLFNEMKTSRGITP--DLYTYNSL 1038
Query: 284 VDMYSKCGNVEEAYNVF----RGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEI 339
+ G VEEA ++ R E N FT++++I G+++ G+ A ++ M+
Sbjct: 1039 ILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGF 1098
Query: 340 KPNHVTF 346
PN T+
Sbjct: 1099 SPNTGTY 1105
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 141/305 (46%), Gaps = 20/305 (6%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSAL---FSAVTNLTLGTQ 129
+PN ++ALI A+ G F EA +L+ M + I P FT+++L F L Q
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYA 185
+ + D+ NT+IK + KS ++ ++F EM R D V++T LI
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 186 RNGDMNSARELFDELDVKDKV-----AWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
+GD ++A+++F ++ V D V ++ ++ G N ++ALE F ++++ ++ D
Sbjct: 372 HDGDCDNAQKVFKQM-VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVF 300
I + G D + C G P NV+ + ++ ++EAY +
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP--NVVTYNTMISGLCSKRLLQEAYALL 488
Query: 301 RGMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHA 356
+ MKE ++ TY+++I G A+ +L EM + T +G++ H
Sbjct: 489 KKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST-IGLVANMLHD 547
Query: 357 GLVDQ 361
G +D+
Sbjct: 548 GRLDK 552
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 150/383 (39%), Gaps = 53/383 (13%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN---LTLGTQ 129
S N + Y+ LI + R + AL L M P T S+L + + ++
Sbjct: 42 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 101
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYA 185
L + +G+ D T+I A + D M QR ++V++ ++
Sbjct: 102 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 161
Query: 186 RNGDMNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEV 241
+ GD++ A L ++++ D V + ++ + +AL F+ + G+ + V
Sbjct: 162 KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 221
Query: 242 TLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFR 301
T + IS G DA + P N++ +AL+D + K G EA +
Sbjct: 222 TYSSLISCLCSYGRWSDASQLLSDMIEKKINP--NLVTFNALIDAFVKEGKFVEAEKLHD 279
Query: 302 GMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKP---------------- 341
M +R + FTY+S+I GF +H R A ++F M+ + P
Sbjct: 280 DMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSK 339
Query: 342 -------------------NHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHY 382
+ VT+ ++ H G D Q +F M GV P Y
Sbjct: 340 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS-DGVPPDIMTY 398
Query: 383 ACMADLLGRAGHLEKALQLVETM 405
+ + D L G LEKAL++ + M
Sbjct: 399 SILLDGLCNNGKLEKALEVFDYM 421
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 143/347 (41%), Gaps = 48/347 (13%)
Query: 94 EALRLYTSMRNQRITPISFTFSALFSAVTNL---TLGTQLHAHALLLGFASDIFVNNTMI 150
+AL L+ M + I P T+S+L S + + + +QL + + ++ N +I
Sbjct: 203 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 262
Query: 151 KMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYARNGDMNSARELFDELDVKDKV 206
+VK G A K+ D+M +R D+ ++ LI + + ++ A+++F+ + KD
Sbjct: 263 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 322
Query: 207 ----AWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWV 262
+ ++ G+ ++ ++ E FR + G+ D VT I G +A V
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 263 RCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKERNAFTYSSMIVGFAIHG 322
S G P + TYS ++ G +G
Sbjct: 383 FKQMVSDGVPP---------------------------------DIMTYSILLDGLCNNG 409
Query: 323 RARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHY 382
+ A+++F M ++EIK + + ++ AG VD G LF ++ GV P+ Y
Sbjct: 410 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVTY 468
Query: 383 ACMADLLGRAGHLEKALQLVETMPVE---PNGAVWGALLGASHVHGN 426
M L L++A L++ M + P+ + L+ A G+
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 137/320 (42%), Gaps = 20/320 (6%)
Query: 102 MRNQRITPISFTFSALFSAVTNLT---LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGC 158
M R P F F+ L SA+ + L L LG + +++ N +I + +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 159 LDSARKVFDEMP----QRDVVSWTELITAYARNGDMNSARELFDELDV----KDKVAWTA 210
+ A + +M + +V+ + L+ Y ++ A L D++ D + +T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 211 MVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWV-RCIAESS 269
++ G + EA+ + + G + + VT ++ + G D D + +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG---DIDLAFNLLNKME 177
Query: 270 GFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER----NAFTYSSMIVGFAIHGRAR 325
+V++ + ++D K +V++A N+F+ M+ + N TYSS+I +GR
Sbjct: 178 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 237
Query: 326 AAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACM 385
A +L +M+E +I PN VTF ++ A G + + L +M + P Y +
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK-RSIDPDIFTYNSL 296
Query: 386 ADLLGRAGHLEKALQLVETM 405
+ L+KA Q+ E M
Sbjct: 297 INGFCMHDRLDKAKQMFEFM 316
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 161/374 (43%), Gaps = 49/374 (13%)
Query: 80 SALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHAHALLL-- 137
+ L+ RG EA ++ ++ + P T++ L +A+T Q H H+LL
Sbjct: 323 TKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTR-----QKHFHSLLSLI 377
Query: 138 ------GFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYARN 187
G D + N +I +SG LD A K+F++M + ++ LI Y +
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 188 GDMNSARELF-----DELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVT 242
G + + L DE+ + +V + +EA ++ G++ D VT
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 243 LAGAISACAQLGASKDADWVRCIAES--------SGFGPARNVLVGSALVDMYSKCGNVE 294
A A++G++ C AE + P NV +V+ Y + G +E
Sbjct: 498 FNTLAKAYARIGST-------CTAEDMIIPRMLHNKVKP--NVRTCGTIVNGYCEEGKME 548
Query: 295 EAYNVFRGMKE----RNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVL 350
EA F MKE N F ++S+I GF ++ M E +KP+ VTF ++
Sbjct: 549 EALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLM 608
Query: 351 VACTHAGLVDQGQYLFSNM-EGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM---P 406
A + G + + + ++++M EG G+ P ++ +A RAG EKA Q++ M
Sbjct: 609 NAWSSVGDMKRCEEIYTDMLEG--GIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFG 666
Query: 407 VEPNGAVWGALLGA 420
V PN ++ ++
Sbjct: 667 VRPNVVIYTQIISG 680
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 172/411 (41%), Gaps = 34/411 (8%)
Query: 22 LRRAKQLHAHIYRHNL----HQSSYIITNLLRHLTTTFPHLPIHSYPRLLFSQVPS---- 73
+ R + AH + L H+ S I L T H HS L+ S+V
Sbjct: 330 IERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHF--HSLLSLI-SKVEKNGLK 386
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHAH 133
P+ L++A+I A + G +A++++ M+ P + TF+ L + G +
Sbjct: 387 PDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI--GKLEESS 444
Query: 134 ALLLGFASDIFVN------NTMIKMYVKSGCLDSARKVFDEMP----QRDVVSWTELITA 183
LL D + N +++ + ++ A + +M + DVV++ L A
Sbjct: 445 RLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKA 504
Query: 184 YARNGDMNSARELFDELDVKDKV-----AWTAMVTGYAQNAMPKEALEFFRCLREAGMET 238
YAR G +A ++ + +KV +V GY + +EAL FF ++E G+
Sbjct: 505 YARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHP 564
Query: 239 DEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNV---EE 295
+ I + V + E G P +V+ S L++ +S G++ EE
Sbjct: 565 NLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKP--DVVTFSTLMNAWSSVGDMKRCEE 622
Query: 296 AY-NVFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACT 354
Y ++ G + + +S + G+A G A ++ +M + ++PN V + ++
Sbjct: 623 IYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWC 682
Query: 355 HAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM 405
AG + + ++ M G G+ P+ Y + G A KA +L++ M
Sbjct: 683 SAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDM 733
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 115/513 (22%), Positives = 220/513 (42%), Gaps = 80/513 (15%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTL---GTQ 129
+P + ++ LIRA A L+ M + P FTF L L G +
Sbjct: 144 APQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLE 203
Query: 130 LHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYA 185
L G + + NT++ + + G D + K+ ++M + D+V++ I+A
Sbjct: 204 LLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALC 263
Query: 186 RNGDMNSARELFDELDVKD--------KVAWTAMVTGYAQNAMPKEALEFFRCLRE---- 233
+ G + A +F ++++ + + + M+ G+ + + ++A F +RE
Sbjct: 264 KEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDL 323
Query: 234 AGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNV 293
A +++ + L G + + G +A+ V G GP+ + + L+D K G +
Sbjct: 324 ASLQSYNIWLQGLV----RHGKFIEAETVLKQMTDKGIGPS--IYSYNILMDGLCKLGML 377
Query: 294 EEAYNVFRGMKERN-----AFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVG 348
+A + G+ +RN A TY ++ G+ G+ AA L EM+ PN T
Sbjct: 378 SDAKTIV-GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI 436
Query: 349 VLVACTHAGLVDQGQYLFSNM-EGCYGVVPSADHYAC--MADLLGRAGHLEKALQLVETM 405
+L + G + + + L M E YG+ D C + D L +G L+KA+++V+ M
Sbjct: 437 LLHSLWKMGRISEAEELLRKMNEKGYGL----DTVTCNIIVDGLCGSGELDKAIEIVKGM 492
Query: 406 PVEPNGAV------WGALLGASHVHGN--PDVAEIVS--------------RHLF----- 438
V + A+ + L+ S + N PD+ + ++LF
Sbjct: 493 RVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMG 552
Query: 439 -ELEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLA 497
+L+P+++ Y + + + G+ RV K M K K+ +E+ N +I L
Sbjct: 553 EKLQPDSVA-YNIFIHHFCKQGKISSAFRVLKDMEKKGCHKS-----LETYNSLI---LG 603
Query: 498 GDVKHPEINEIKKALDDLLERLKAIGYLPNLSS 530
+K+ +I EI +D++ E+ G PN+ +
Sbjct: 604 LGIKN-QIFEIHGLMDEMKEK----GISPNICT 631
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 190/451 (42%), Gaps = 73/451 (16%)
Query: 22 LRRAKQLHAHIYR-HNLHQSSYI----ITNLL---------RHLTTTFPHLPIHSYPRLL 67
L RAK +H I HNL SS I +++LL H+ FP +L+
Sbjct: 49 LVRAK-MHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQF------QLV 101
Query: 68 FSQVPS--PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLT 125
S+ P P+ +LY+ L L + ++ +R+ +S+
Sbjct: 102 RSRFPENKPSVYLYNLL---------------LESCIKERRVEFVSW------------- 133
Query: 126 LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELI 181
L+ +L G A + N +I+ S C+D+AR++FDEMP++ + ++ L+
Sbjct: 134 ----LYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILV 189
Query: 182 TAYARNGDMNSARELFDELD----VKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGME 237
Y + G + EL + ++ + +KV + +V+ + + ++ + +RE G+
Sbjct: 190 RGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLV 249
Query: 238 TDEVTLAGAISACAQLGASKDADWVRCIAESSGF--GPARNVLVGSALVDMYSKCGNVEE 295
D VT ISA + G DA + E + P N + + ++ + K G +E+
Sbjct: 250 PDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLED 309
Query: 296 AYNVFRGMKERNAF----TYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLV 351
A +F ++E + +Y+ + G HG+ A + +M + I P+ ++ ++
Sbjct: 310 AKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMD 369
Query: 352 ACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVE--- 408
G++ + + M+ GV P A Y C+ G ++ A L++ M
Sbjct: 370 GLCKLGMLSDAKTIVGLMKR-NGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCL 428
Query: 409 PNGAVWGALLGASHVHGNPDVAEIVSRHLFE 439
PN LL + G AE + R + E
Sbjct: 429 PNAYTCNILLHSLWKMGRISEAEELLRKMNE 459
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/400 (19%), Positives = 147/400 (36%), Gaps = 77/400 (19%)
Query: 79 YSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHAHALLL- 137
Y+ ++ G F EA + M ++ I P ++++ L + L + + L+
Sbjct: 329 YNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMK 388
Query: 138 --GFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDVV----SWTELITAYARNGDMN 191
G D ++ Y G +D+A+ + EM + + + + L+ + + G ++
Sbjct: 389 RNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRIS 448
Query: 192 SARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET--------- 238
A EL +++ K D V +V G + +A+E + +R G
Sbjct: 449 EAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYI 508
Query: 239 --------------DEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALV 284
D +T + ++ + G +A AE G + + + +
Sbjct: 509 GLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAK--NLFAEMMGEKLQPDSVAYNIFI 566
Query: 285 DMYSKCGNVEEAYNVFRGMKERNAF----TYSSMIVG-------FAIHG----------- 322
+ K G + A+ V + M+++ TY+S+I+G F IHG
Sbjct: 567 HHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGIS 626
Query: 323 -----------------RARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYL 365
+ A L EM++ I PN +F ++ A D Q +
Sbjct: 627 PNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEV 686
Query: 366 FSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM 405
F G Y+ M + L AG L KA +L+E +
Sbjct: 687 FETAVSICG--QKEGLYSLMFNELLAAGQLLKATELLEAV 724
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 163/376 (43%), Gaps = 21/376 (5%)
Query: 70 QVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSAL---FSAVTNLTL 126
V P ++ AL G EA++ ++ M+ R+ P + + + L F+ +
Sbjct: 186 NVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDD 245
Query: 127 GTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELIT 182
+ + G +F N MI K G +++AR +F+EM R D V++ +I
Sbjct: 246 VKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMID 305
Query: 183 AYARNGDMNSARELFDELD----VKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET 238
+ + G ++ F+E+ D + + A++ + + LEF+R ++ G++
Sbjct: 306 GFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKP 365
Query: 239 DEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYN 298
+ V+ + + A + G + A ++ + G N ++L+D K GN+ +A+
Sbjct: 366 NVVSYSTLVDAFCKEGMMQQA--IKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423
Query: 299 VFRGM----KERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACT 354
+ M E N TY+++I G R + A +LF +M + PN ++ ++
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483
Query: 355 HAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMP---VEPNG 411
A +D+ L + ++G G+ P Y L +E A ++ M ++ N
Sbjct: 484 KAKNMDRALELLNELKG-RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANS 542
Query: 412 AVWGALLGASHVHGNP 427
++ L+ A GNP
Sbjct: 543 LIYTTLMDAYFKSGNP 558
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 166/417 (39%), Gaps = 59/417 (14%)
Query: 39 QSSYIITNLLRHLTTTFPHLPIH-SYPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALR 97
+ I N L + F LPI + R + PN YS L+ A+ G +A++
Sbjct: 329 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 388
Query: 98 LYTSMRNQRITPISFTFSALFSA---VTNLTLGTQLHAHALLLGFASDIFVNNTMIKMYV 154
Y MR + P +T+++L A + NL+ +L L +G ++ +I
Sbjct: 389 FYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 448
Query: 155 KSGCLDSARKVFDEMPQRDVV----SWTELITAYARNGDMNSARELFDELDVK------- 203
+ + A ++F +M V+ S+ LI + + +M+ A EL +EL +
Sbjct: 449 DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL 508
Query: 204 --------------------------------DKVAWTAMVTGYAQNAMPKEALEFFRCL 231
+ + +T ++ Y ++ P E L +
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Query: 232 REAGMETDEVTLAGAISA-CAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKC 290
+E +E VT I C SK D+ I S+ FG N + +A++D K
Sbjct: 569 KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI--SNDFGLQANAAIFTAMIDGLCKD 626
Query: 291 GNVEEAYNVFRGMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTF 346
VE A +F M ++ + Y+S++ G G A+ L +M E +K + + +
Sbjct: 627 NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAY 686
Query: 347 VGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLG--RAGHLEKALQL 401
++ +H + + + M G G+ P D C++ L G +++A++L
Sbjct: 687 TSLVWGLSHCNQLQKARSFLEEMIG-EGIHP--DEVLCISVLKKHYELGCIDEAVEL 740
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 136/318 (42%), Gaps = 24/318 (7%)
Query: 219 AMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVL 278
M +EA++ F ++ + + G + A+LG + D R + G G V
Sbjct: 206 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVK--RFFKDMIGAGARPTVF 263
Query: 279 VGSALVDMYSKCGNVEEAYNVFRGMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEM 334
+ ++D K G+VE A +F MK R + TY+SMI GF GR + F EM
Sbjct: 264 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 323
Query: 335 LETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGH 394
+ +P+ +T+ ++ G + G + M+G G+ P+ Y+ + D + G
Sbjct: 324 KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG-NGLKPNVVSYSTLVDAFCKEGM 382
Query: 395 LEKALQLVETM---PVEPNGAVWGALLGASHVHGNPDVAEIVSRHLFELEPN-NIGNYLL 450
+++A++ M + PN + +L+ A+ GN A + + ++ N+ Y
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 451 LSNTYASAGRWDDVSRVRKLMRDKNLKKNPGYSWVESRNGVIHEFLAGDVKHPEINEIKK 510
L + A R + + M + N + S N +IH F+ + +
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPN-----LASYNALIHGFVKA-------KNMDR 490
Query: 511 ALDDLLERLKAIGYLPNL 528
AL +LL LK G P+L
Sbjct: 491 AL-ELLNELKGRGIKPDL 507
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 150/365 (41%), Gaps = 21/365 (5%)
Query: 72 PSPNPFLYSALIRAYTLRGP---FTEALRLYTSMRNQRITPISFTFSALFSAVT---NLT 125
P PF+ R ++ + E + L+ M R P FS + S + N
Sbjct: 27 PVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYD 86
Query: 126 LGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMP----QRDVVSWTELI 181
L L H + G D++ N +I + A V +M + DVV+ + LI
Sbjct: 87 LVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLI 146
Query: 182 TAYARNGDMNSARELFDELDV----KDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGME 237
+ + + A +L +++ D V + ++ G + + +A+E F + G+
Sbjct: 147 NGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVR 206
Query: 238 TDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAY 297
D VT ++ G DA R + + NV+ +A++D++ K G EA
Sbjct: 207 ADAVTYNSLVAGLCCSGRWSDA--ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAM 264
Query: 298 NVFRGMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVAC 353
++ M R + FTY+S+I G +HGR A ++ M+ P+ VT+ ++
Sbjct: 265 KLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGF 324
Query: 354 THAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMPVEPNGAV 413
+ VD+G LF M G+V Y + +AG + A ++ M PN
Sbjct: 325 CKSKRVDEGTKLFREMAQ-RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRT 383
Query: 414 WGALL 418
+ LL
Sbjct: 384 YSILL 388
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 125/280 (44%), Gaps = 49/280 (17%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVT---NLTLGTQL 130
PN ++A+I + G F+EA++LY M + + P FT+++L + + + Q+
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
Query: 131 HAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYAR 186
+ G D+ NT+I + KS +D K+F EM QR D +++ +I Y +
Sbjct: 302 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 361
Query: 187 NGDMNSARELFDELDVKDKV-AWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
G ++A+E+F +D + + ++ ++ G N ++AL F ++++ +E D T
Sbjct: 362 AGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 421
Query: 246 AISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE 305
I ++ GNVE+A+++FR +
Sbjct: 422 VIHGMCKI-------------------------------------GNVEDAWDLFRSLSC 444
Query: 306 R----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKP 341
+ + +Y++MI GF + + L+ +M E + P
Sbjct: 445 KGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 142/341 (41%), Gaps = 48/341 (14%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHAH 133
P Y++L+ Y +G +ALRLY M + I P +TF+ L S +
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL------------ 517
Query: 134 ALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRDV----VSWTELITAYARNGD 189
++G + A K+F+EM + +V V++ +I Y GD
Sbjct: 518 --------------------FRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557
Query: 190 MNSARELFDELD----VKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
M+ A E E+ V D ++ ++ G EA F L + E +E+ G
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617
Query: 246 AISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE 305
+ + G ++A + E G +++ L+D K + + + + + M +
Sbjct: 618 LLHGFCREGKLEEA--LSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD 675
Query: 306 R----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQ 361
R + Y+SMI + G + A ++ M+ PN VT+ V+ AG V++
Sbjct: 676 RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNE 735
Query: 362 GQYLFSNMEGCYGVVPSADHYACMADLLGRAG-HLEKALQL 401
+ L S M+ VP+ Y C D+L + ++KA++L
Sbjct: 736 AEVLCSKMQP-VSSVPNQVTYGCFLDILTKGEVDMQKAVEL 775
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/431 (20%), Positives = 175/431 (40%), Gaps = 64/431 (14%)
Query: 73 SPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHA 132
SP+ S+L+ RG EAL L + + ++P F ++AL + +L G + H
Sbjct: 329 SPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNAL---IDSLCKGRKFHE 385
Query: 133 HALL------LGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMP----QRDVVSWTELIT 182
LL +G + + +I M+ + G LD+A EM + V + LI
Sbjct: 386 AELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLIN 445
Query: 183 AYARNGDMNSARELFDELDVKD----KVAWTAMVTGYAQNAMPKEALEFFRCLREAGMET 238
+ + GD+++A E+ K V +T+++ GY +AL + + G+
Sbjct: 446 GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAP 505
Query: 239 DEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYN 298
T +S + G +DA V+ E + + N + + +++ Y + G++ +A+
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDA--VKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE 563
Query: 299 VFRGMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEML-ETEIKPNHVTFVGVLVAC 353
+ M E+ + ++Y +I G + G+A A K+F + L + + N + + G+L
Sbjct: 564 FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLLHGF 622
Query: 354 THAGLVDQGQYLFSNMEG--------CYGVV--------------------------PSA 379
G +++ + M CYGV+ P
Sbjct: 623 CREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDD 682
Query: 380 DHYACMADLLGRAGHLEKALQLVETMPVE---PNGAVWGALLGASHVHGNPDVAEIVSRH 436
Y M D + G ++A + + M E PN + A++ G + AE++
Sbjct: 683 VIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSK 742
Query: 437 LFELE--PNNI 445
+ + PN +
Sbjct: 743 MQPVSSVPNQV 753
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 144/351 (41%), Gaps = 26/351 (7%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHAH 133
PN Y+ +I Y G ++A M + I P ++++ L + LT G A
Sbjct: 540 PNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC-LT-GQASEAK 597
Query: 134 ALLLGFAS-----DIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAY 184
+ G + ++ + + G L+ A V EM QR D+V + LI
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657
Query: 185 ARNGD----MNSARELFDELDVKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDE 240
++ D +E+ D D V +T+M+ ++ KEA + + G +E
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717
Query: 241 VTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVE-----E 295
VT I+ + G +A+ V C ++ N + +D+ +K G V+ E
Sbjct: 718 VTYTAVINGLCKAGFVNEAE-VLC-SKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVE 774
Query: 296 AYN-VFRGMKERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACT 354
+N + +G+ N TY+ +I GF GR A +L M+ + P+ +T+ ++
Sbjct: 775 LHNAILKGLLA-NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELC 833
Query: 355 HAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETM 405
V + L+++M G+ P Y + AG + KA +L M
Sbjct: 834 RRNDVKKAIELWNSMTE-KGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 154/368 (41%), Gaps = 61/368 (16%)
Query: 92 FTEALRLYTSMRNQRITPISFTFSALFSAVTNL-------TLGTQLHAHALLLGFASDIF 144
+A+ L++ M R P F+ L SA+ L +LG ++ +LG +D++
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKME----VLGIRNDLY 121
Query: 145 VNNTMIKMYVKSGCLDSARKVFDEMP----QRDVVSWTELITAYARNGDMNSARELFD-- 198
N +I + + A + +M + D V+ L+ + R ++ A L D
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 199 -ELDVK-DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGAS 256
E+ K D VA+ A++ + +A +FF+ + G+ + VT ++ +S
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN--SS 239
Query: 257 KDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMK----ERNAFTYS 312
+ +D R +++ NV+ SAL+D + K G V EA +F M + + TYS
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Query: 313 SMIVGFAIHGRARAA-----------------------------------IKLFYEMLET 337
S+I G +H R A +KLF EM +
Sbjct: 300 SLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Query: 338 EIKPNHVTFVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEK 397
+ N VT+ ++ AG VD+ Q FS M+ +G+ P Y + L G LEK
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF-FGISPDIWTYNILLGGLCDNGELEK 418
Query: 398 ALQLVETM 405
AL + E M
Sbjct: 419 ALVIFEDM 426
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 140/312 (44%), Gaps = 52/312 (16%)
Query: 74 PNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHAH 133
PN Y+AL+ +++A RL + M ++ITP T+SAL A
Sbjct: 223 PNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA------------- 269
Query: 134 ALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYARNGD 189
+VK+G + A+++F+EM + D+V+++ LI +
Sbjct: 270 -------------------FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 190 MNSARELFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAG 245
++ A ++FD + K D V++ ++ G+ + ++ ++ FR + + G+ ++ VT
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 246 AISACAQLGASKDADWVRCIAESSGFGP---ARNVLVGSALVDMYSKCGNVEEAYNVFRG 302
I Q G A + G P N+L+G L D G +E+A +F
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG-GLCDN----GELEKALVIFED 425
Query: 303 MKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGL 358
M++R + TY+++I G G+ A LF + +KP+ VT+ ++ GL
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Query: 359 VDQGQYLFSNME 370
+ + + L++ M+
Sbjct: 486 LHEVEALYTKMK 497
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 178/418 (42%), Gaps = 24/418 (5%)
Query: 79 YSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTN---LTLGTQLHAHAL 135
Y+AL+ Y EA+++ M +P T+++L SA L +L
Sbjct: 317 YNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMA 376
Query: 136 LLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMP----QRDVVSWTELITAYARNGDMN 191
G D+F T++ + ++G ++SA +F+EM + ++ ++ I Y G
Sbjct: 377 EKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFT 436
Query: 192 SARELFDELDV----KDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAI 247
++FDE++V D V W ++ + QN M E F+ ++ AG + T I
Sbjct: 437 EMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLI 496
Query: 248 SACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKE-- 305
SA ++ G+ + A V +G P ++ + ++ ++ G E++ V M++
Sbjct: 497 SAYSRCGSFEQAMTVYRRMLDAGVTP--DLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Query: 306 --RNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQ 363
N TY S++ +A L E+ I+P V +++ C+ L+ + +
Sbjct: 555 CKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAE 614
Query: 364 YLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMP---VEPNGAVWGALLGA 420
FS ++ G P M + GR + KA +++ M P+ A + +L+
Sbjct: 615 RAFSELKE-RGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYM 673
Query: 421 SHVHGNPDVAEIVSRHLFE--LEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNL 476
+ +E + R + ++P+ I +Y + Y R D SR+ MR+ +
Sbjct: 674 HSRSADFGKSEEILREILAKGIKPDII-SYNTVIYAYCRNTRMRDASRIFSEMRNSGI 730
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 156/360 (43%), Gaps = 22/360 (6%)
Query: 138 GFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYARNGD-MNS 192
GF+ D++ ++I + SG A VF +M + ++++ ++ + + G N
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 193 ARELFDELD----VKDKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAIS 248
L +++ D + ++T + ++ +EA + F ++ AG D+VT +
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 249 ACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER-- 306
+ K+A V +GF P+ ++ ++L+ Y++ G ++EA + M E+
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPS--IVTYNSLISAYARDGMLDEAMELKNQMAEKGT 380
Query: 307 --NAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQY 364
+ FTY++++ GF G+ +A+ +F EM KPN TF + + G +
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMK 440
Query: 365 LFSNMEGCYGVVPSADHYACMADLLGRAGHLEKALQLVETMP---VEPNGAVWGALLGAS 421
+F + C G+ P + + + G+ G + + + M P + L+ A
Sbjct: 441 IFDEINVC-GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 422 HVHGNPDVAEIVSRHLFE--LEPNNIGNYLLLSNTYASAGRWDDVSRVRKLMRDKNLKKN 479
G+ + A V R + + + P ++ Y + A G W+ +V M D K N
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTP-DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPN 558
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 91/211 (43%), Gaps = 11/211 (5%)
Query: 60 IHSYPRLLFSQVPSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSALFS 119
+HS ++S V P L L+ + EA R ++ ++ + +P T +++ S
Sbjct: 578 MHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVS 637
Query: 120 AVTNLTLGTQLHA---HALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR---- 172
+ + + + GF + N+++ M+ +S + ++ E+ +
Sbjct: 638 IYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKP 697
Query: 173 DVVSWTELITAYARNGDMNSARELFDELD----VKDKVAWTAMVTGYAQNAMPKEALEFF 228
D++S+ +I AY RN M A +F E+ V D + + + YA ++M +EA+
Sbjct: 698 DIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVV 757
Query: 229 RCLREAGMETDEVTLAGAISACAQLGASKDA 259
R + + G ++ T + +L +A
Sbjct: 758 RYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 155/354 (43%), Gaps = 19/354 (5%)
Query: 61 HSYPRLLFSQV----PSPNPFLYSALIRAYTLRGPFTEALRLYTSMRNQRITPISFTFSA 116
HS + LFS++ +PN F Y+ +I + G +++A RL M + I P TF+A
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371
Query: 117 LFSAVTN---LTLGTQLHAHALLLGFASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQRD 173
L SA L +L L D N+MI + K D A+ +FD M D
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPD 431
Query: 174 VVSWTELITAYARNGDMNSARELFDELD----VKDKVAWTAMVTGYAQNAMPKEALEFFR 229
VV++ +I Y R ++ +L E+ V + + ++ G+ + A + F+
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 230 CLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAESSGFGPARNVLVGSALVDMYSK 289
+ G+ D +T + + ++A + + + S + + + ++ K
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID--LDTVAYNIIIHGMCK 549
Query: 290 CGNVEEAYNVFRGMK----ERNAFTYSSMIVGFAIHGRARAAIKLFYEMLETEIKPNHVT 345
V+EA+++F + E + TY+ MI GF A LF++M + +P++ T
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNST 609
Query: 346 FVGVLVACTHAGLVDQGQYLFSNMEGCYGVVPSADHYACMADLLGRAGHLEKAL 399
+ ++ C AG +D+ L S M G A +ADL+ G L+K+
Sbjct: 610 YNTLIRGCLKAGEIDKSIELISEMRS-NGFSGDAFTIKMVADLI-TDGRLDKSF 661
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 117/286 (40%), Gaps = 29/286 (10%)
Query: 95 ALRLYTSMRNQRITPISFTFSAL---FSAVTNLTLGTQLHAHALLLGFASDIFVNNTMIK 151
A+ LY M +RI ++F+ L F L+ LGF D+ NT++
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 152 MYVKSGCLDSARKVFDEMPQRDVVSWTELITAYARNGDMNSARELFDELD----VKDKVA 207
CL+ D +S + Y A LFD++ +
Sbjct: 185 ----GLCLE------------DRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVIT 228
Query: 208 WTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACAQLGASKDADWVRCIAE 267
+ ++ G EA + G+ D VT ++ ++G +K A + E
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 268 SSGFGPARNVLVGSALVDMYSKCGNVEEAYNVFRGMKER----NAFTYSSMIVGFAIHGR 323
+ P +V++ SA++D K G+ +A +F M E+ N FTY+ MI GF GR
Sbjct: 289 ETHIKP--DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR 346
Query: 324 ARAAIKLFYEMLETEIKPNHVTFVGVLVACTHAGLVDQGQYLFSNM 369
A +L +M+E EI P+ +TF ++ A G + + + L M
Sbjct: 347 WSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 127/307 (41%), Gaps = 48/307 (15%)
Query: 85 AYTLRGPFTEALRLYTSMRNQRITPISFTFSALFSAVTNLTLGTQLHAHALL-----LGF 139
Y + F EA+ L+ M +TP+ TF+ L + + G L A AL+ G
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLC--LEGRVLEAAALVNKMVGKGL 257
Query: 140 ASDIFVNNTMIKMYVKSGCLDSARKVFDEMPQR----DVVSWTELITAYARNGDMNSARE 195
D+ T++ K G SA + +M + DVV ++ +I ++G + A+
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317
Query: 196 LFDELDVK----DKVAWTAMVTGYAQNAMPKEALEFFRCLREAGMETDEVTLAGAISACA 251
LF E+ K + + M+ G+ +A R + E + D +T ISA
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377
Query: 252 QLGASKDADWV------RCI--------------AESSGFGPAR---------NVLVGSA 282
+ G +A+ + RCI + + F A+ +V+ +
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNT 437
Query: 283 LVDMYSKCGNVEEAYNVFRGMKER----NAFTYSSMIVGFAIHGRARAAIKLFYEMLETE 338
++D+Y + V+E + R + R N TY+++I GF AA LF EM+
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 339 IKPNHVT 345
+ P+ +T
Sbjct: 498 VCPDTIT 504