Miyakogusa Predicted Gene

Lj4g3v2604460.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v2604460.1 tr|G7LIP3|G7LIP3_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_8g0,76.3,0,PPR,Pentatricopeptide repeat; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; TPR-like,NULL; PPR: p,CUFF.51411.1
         (1848 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57792 weakly similar to UniRef100_Q9FFG8 Cluster: Sel...  1021   0.0  
gnl|LJGI|TC60434 similar to UniRef100_A7QE77 Cluster: Chromosome...   301   8e-81

>gnl|LJGI|TC57792 weakly similar to UniRef100_Q9FFG8 Cluster: Selenium-binding
           protein-like; n=1; Arabidopsis thaliana|Rep:
           Selenium-binding protein-like - Arabidopsis thaliana
           (Mouse-ear cress), partial (22%)
          Length = 837

 Score = 1021 bits (515), Expect = 0.0
 Identities = 518/519 (99%)
 Strand = Plus / Plus

                                                                       
Query: 247 atccgcgcctacaccctccgaggacccttcaccgaagcccttcgcttatacacgtccatg 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 atccgcgcctacaccctccgaggacccttcaccgaagcccttcgcttatacacgtccatg 378

                                                                       
Query: 307 agaaaccaacgcatcacccccatctccttcaccttctccgctctcttctccgccgtcaca 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 agaaaccaacgcatcacccccatctccttcaccttctccgctctcttctccgccgtcaca 438

                                                                       
Query: 367 aacctcacgttgggaacccagctccatgcacatgccctcttgcttggctttgcctctgat 426
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aacctcacgttgggaacccagctccatgcacatgccctcttgcttggctttgcctctgat 498

                                                                       
Query: 427 atcttcgtcaacaatacaatgatcaaaatgtacgtgaagtccgggtgtttggactccgcg 486
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 499 atcttcgtcaacaatacaatgaccaaaatgtacgtgaagtccgggtgtttggactccgcg 558

                                                                       
Query: 487 cgcaaggtgttcgatgaaatgcctcaacgggatgttgtttcatggactgagttgattact 546
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 cgcaaggtgttcgatgaaatgcctcaacgggatgttgtttcatggactgagttgattact 618

                                                                       
Query: 547 gcgtatgccaggaatggtgacatgaattccgcgcgcgagttgtttgatgagttggatgtg 606
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gcgtatgccaggaatggtgacatgaattccgcgcgcgagttgtttgatgagttggatgtg 678

                                                                       
Query: 607 aaggataaggtggcttggactgccatggttactgggtatgctcagaatgccatgccgaag 666
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 aaggataaggtggcttggactgccatggttactgggtatgctcagaatgccatgccgaag 738

                                                                       
Query: 667 gaggcgttggagttttttcggtgcttgcgggaggcgggtatggagactgatgaggttaca 726
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gaggcgttggagttttttcggtgcttgcgggaggcgggtatggagactgatgaggttaca 798

                                                  
Query: 727 ttggctggtgcgatttctgcttgtgctcaattgggtgcg 765
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ttggctggtgcgatttctgcttgtgctcaattgggtgcg 837



 Score =  252 bits (127), Expect = 7e-66
 Identities = 130/131 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggttggtgagcgaagggctttggagtggcaagtggtgagtattctcaacacttgcacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73  atggttggtgagcgaagggctttggagtggcaagtggtgagtattctcaacacttgcacc 132

                                                                       
Query: 61  accctccgccgcgccaaacaactccacgcccacatctaccgccacaacctccaccaatcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 accctccgccgcgccaaacaactccacgcccacatctaccgccacaacctccaccaatcc 192

                      
Query: 121 tcgtacatcat 131
           || ||||||||
Sbjct: 193 tcctacatcat 203


>gnl|LJGI|TC60434 similar to UniRef100_A7QE77 Cluster: Chromosome chr4 scaffold_83,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr4 scaffold_83, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (9%)
          Length = 822

 Score =  301 bits (152), Expect = 8e-81
 Identities = 152/152 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1697 taaagattatgaagaaccttaggatatgtgaggattgtcatattgtgatgtgtggcgcat 1756
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    taaagattatgaagaaccttaggatatgtgaggattgtcatattgtgatgtgtggcgcat 60

                                                                        
Query: 1757 caaaagttacaggaagaaaaattgttgtgagggataacatgagattccaccacttcctta 1816
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   caaaagttacaggaagaaaaattgttgtgagggataacatgagattccaccacttcctta 120

                                            
Query: 1817 atggggcctgctcttgcggtgatttttggtga 1848
            ||||||||||||||||||||||||||||||||
Sbjct: 121  atggggcctgctcttgcggtgatttttggtga 152