Miyakogusa Predicted Gene

Lj4g3v2593510.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2593510.1 tr|G7JEN0|G7JEN0_MEDTR Exocyst complex subunit
SEC6 OS=Medicago truncatula GN=MTR_4g024570 PE=4
SV=1,92.32,0,seg,NULL; EXOCYST COMPLEX COMPONENT SEC6,NULL; EXOCYST
COMPLEX COMPONENT SEC6-RELATED,Exocyst comple,CUFF.51200.1
         (756 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g024570.1 | exocyst complex subunit SEC6, putative | HC | ...  1416   0.0  

>Medtr4g024570.1 | exocyst complex subunit SEC6, putative | HC |
           chr4:8282729-8303725 | 20130731
          Length = 757

 Score = 1416 bits (3665), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 681/756 (90%), Positives = 702/756 (92%)

Query: 1   MMVEDLGXXXXXXXXXXXXXLLPLPELLHSISSIKADYISRQQANDAQLSTMVVEQVEEA 60
           MM EDLG             LLPLPELL SI+SIKADYISRQQANDAQLSTMV EQVE++
Sbjct: 2   MMAEDLGVEAKEASVREVAKLLPLPELLQSIASIKADYISRQQANDAQLSTMVAEQVEKS 61

Query: 61  QAGLKSLSSSEKTVNQLRENFLSIEKLCQECQTLIDNHDQIKLLSNARNNLNTTLKDVEG 120
           QAGLKSLS SEKT+NQLRENFL+IE LCQECQTLI+NHDQIK+LSNARNNLNTTLKDVEG
Sbjct: 62  QAGLKSLSFSEKTINQLRENFLAIENLCQECQTLIENHDQIKILSNARNNLNTTLKDVEG 121

Query: 121 MMSISVEAAEARDSLSDDKEIVNTYERLTALDGKRRFALAAAGSHKEEVGRLREYFEDVD 180
           MMSISVEAAEARDSL+DDKEIVNTYERLTALDGKRRFALAAAGSHKEEVGRLREYFEDVD
Sbjct: 122 MMSISVEAAEARDSLTDDKEIVNTYERLTALDGKRRFALAAAGSHKEEVGRLREYFEDVD 181

Query: 181 QTWETFEKTLWGHISNYYKLSKESPQTLVRALRVVEMQEVHXXXXXXXXXXXXXXXXXXX 240
           QTWE FEKTLWGH+ N+YKLSKESPQTLVRALRVVEMQE+                    
Sbjct: 182 QTWENFEKTLWGHVGNFYKLSKESPQTLVRALRVVEMQEILDQQVAEDLAEAEGDGALAS 241

Query: 241 XPNPRRTTVKSTSTMASSKNLAQQKLKVQGKGYKDKCYEHIRKTVESRFDKLLNELVFED 300
             NP R+ +KSTS MASSKNL QQKLK+QGKGYKDKCYE IRKTVE RFDKLLNELV ED
Sbjct: 242 TANPHRSAIKSTSAMASSKNLTQQKLKIQGKGYKDKCYEQIRKTVEGRFDKLLNELVIED 301

Query: 301 LKAALEEARAIGEELGDVYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTN 360
           LKAALEEAR IGEELGD+YDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDR+N+LTN
Sbjct: 302 LKAALEEARVIGEELGDIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRSNDLTN 361

Query: 361 IEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGAMDPLMNSYVERMQATTRKWYLNILE 420
           IEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGAMDPLMNSYVERMQATTRKWYLNILE
Sbjct: 362 IEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGAMDPLMNSYVERMQATTRKWYLNILE 421

Query: 421 ADKTQPPKKTEDGKLYTPAAVDLFRILGEQVQIVRDNSTDVMLYRISLATIQVMIDFQAA 480
           ADKTQPPKKTEDGKLYTPAAVDLFRILGEQVQIVRDNSTDVMLYRISLATIQVMIDFQAA
Sbjct: 422 ADKTQPPKKTEDGKLYTPAAVDLFRILGEQVQIVRDNSTDVMLYRISLATIQVMIDFQAA 481

Query: 481 EKKRLEEPASEIGLEPLCAMINNNLRCYDLAMELSNSTIEALPQNYAEQVNFEDTCKGFL 540
           EKKRL+EPASEIGLEPLCAMINNNLRCYDLAMELSNSTIEALPQNYAEQVNFEDTCKGFL
Sbjct: 482 EKKRLQEPASEIGLEPLCAMINNNLRCYDLAMELSNSTIEALPQNYAEQVNFEDTCKGFL 541

Query: 541 EVAKEAVHQTVSVIFEDPGVQELLVKLYHKEWSEGQITEYLVATFGDYFTDVKMYIEERS 600
           EVAKEAVHQTVSVIFEDPGVQELLVKLYHKEWSEGQ+TEYLVATFGDYFTDVKMYIEERS
Sbjct: 542 EVAKEAVHQTVSVIFEDPGVQELLVKLYHKEWSEGQVTEYLVATFGDYFTDVKMYIEERS 601

Query: 601 FRRFVEACLEETVVVYVDHLLTQKNYIKEETIERMRLDEEVIMDFFREHISVSKVENRVS 660
           FRRFVEACLEETVVVYVD LLTQKNYIKEETIERMRLDEEVIMDFFREHISVSKVENRVS
Sbjct: 602 FRRFVEACLEETVVVYVDRLLTQKNYIKEETIERMRLDEEVIMDFFREHISVSKVENRVS 661

Query: 661 VLSDLRELASAESLDTFTLIYTNILEHQPDCPPEVVEKLVGLREGIPRKDAKEVIQECKE 720
           VLSDLRELASAESLDTFTLIYTNILEHQPDCPPEVVEKLVGLREGIPRKDAKEVIQECK+
Sbjct: 662 VLSDLRELASAESLDTFTLIYTNILEHQPDCPPEVVEKLVGLREGIPRKDAKEVIQECKD 721

Query: 721 IYENSLVDGRPPKAGFVFRRVKCLQASKGGLWRKLT 756
           IYENSLVDGRPPK GFVF RVKCL ASKGG+WRKLT
Sbjct: 722 IYENSLVDGRPPKTGFVFHRVKCLTASKGGIWRKLT 757