Miyakogusa Predicted Gene

Lj4g3v2573890.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2573890.1 Non Chatacterized Hit- tr|I1K3P3|I1K3P3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.29530
PE,83.05,0,Rho_GDI,RHO protein GDP dissociation inhibitor; E set
domains,Immunoglobulin E-set; seg,NULL; no des,CUFF.51145.1
         (237 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G07880.1 | Symbols: SCN1 | Immunoglobulin E-set superfamily p...   226   8e-60
AT1G62450.1 | Symbols:  | Immunoglobulin E-set superfamily prote...   204   4e-53
AT1G12070.1 | Symbols:  | Immunoglobulin E-set superfamily prote...   197   4e-51

>AT3G07880.1 | Symbols: SCN1 | Immunoglobulin E-set superfamily
           protein | chr3:2514175-2515544 FORWARD LENGTH=240
          Length = 240

 Score =  226 bits (577), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 109/176 (61%), Positives = 132/176 (75%), Gaps = 1/176 (0%)

Query: 62  GPQFSLKEQLEKDKDDESLRKWKEQLLGSVDMPAVGENKEPEVKILSLTIICQGRPELLL 121
           GPQ+++KE LEKDKDDESLRKWKEQLLGSVD+  +GE  +PEV+I SL II  GRP+++L
Sbjct: 65  GPQYTIKEHLEKDKDDESLRKWKEQLLGSVDVTNIGETLDPEVRIDSLAIISPGRPDIVL 124

Query: 122 PIPFTTNSKKSSIFTLKEGSRYRLKFSFTVSNNIVSGLKYTNVVWKTGVRVDNAKRMLGT 181
            +P   N  K   FTLKEGS+Y LKF+F V+NNIVSGL+YTN VWKTGV+VD AK MLGT
Sbjct: 125 LVPENGNP-KGMWFTLKEGSKYNLKFTFHVNNNIVSGLRYTNTVWKTGVKVDRAKEMLGT 183

Query: 182 YSXXXXXXXXXXXXXXXXSGLFARGTYSARTKFVDDDRKCYLDATYHFEIQKNWPA 237
           +S                SG+FARG+YSARTKF+DDD KCYL+  Y F+I+K WPA
Sbjct: 184 FSPQLEPYNHVMPEETTPSGMFARGSYSARTKFLDDDNKCYLEINYSFDIRKEWPA 239


>AT1G62450.1 | Symbols:  | Immunoglobulin E-set superfamily protein
           | chr1:23115958-23117370 REVERSE LENGTH=223
          Length = 223

 Score =  204 bits (519), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 101/175 (57%), Positives = 124/175 (70%), Gaps = 1/175 (0%)

Query: 62  GPQFSLKEQLEKDKDDESLRKWKEQLLGSVDMPAVGENKEPEVKILSLTIICQGRPELLL 121
           GP  +LKEQLE+DKDDESLR+WKEQLLG VD+  VGE  +P VKIL LTI    R E++L
Sbjct: 48  GPMIALKEQLERDKDDESLRRWKEQLLGVVDLEDVGETPDPVVKILDLTIRSPDREEMVL 107

Query: 122 PIPFT-TNSKKSSIFTLKEGSRYRLKFSFTVSNNIVSGLKYTNVVWKTGVRVDNAKRMLG 180
            IP     + K   FT+KEGS+Y L F+F V+NNIVSGL+Y N VWKTGV+VD+ K MLG
Sbjct: 108 TIPEDGLPNPKGPWFTIKEGSKYTLVFNFRVTNNIVSGLRYNNTVWKTGVKVDSTKAMLG 167

Query: 181 TYSXXXXXXXXXXXXXXXXSGLFARGTYSARTKFVDDDRKCYLDATYHFEIQKNW 235
           T+S                SG+FARG+YSARTKF+DDD KCYL+  Y F+I+K+W
Sbjct: 168 TFSPQAESYQHVMPEEMTPSGMFARGSYSARTKFIDDDNKCYLEINYTFDIRKSW 222


>AT1G12070.1 | Symbols:  | Immunoglobulin E-set superfamily protein
           | chr1:4078913-4080106 REVERSE LENGTH=223
          Length = 223

 Score =  197 bits (502), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 98/175 (56%), Positives = 123/175 (70%), Gaps = 1/175 (0%)

Query: 62  GPQFSLKEQLEKDKDDESLRKWKEQLLGSVDMPAVGENKEPEVKILSLTIICQGRPELLL 121
           GP  +LKEQLEKDKDDESLR+WKEQLLGSVD+  VGE  +P VKIL+LTI    R +++L
Sbjct: 48  GPMIALKEQLEKDKDDESLRRWKEQLLGSVDLEEVGETPDPLVKILTLTIRSPDREDMVL 107

Query: 122 PIPFTTN-SKKSSIFTLKEGSRYRLKFSFTVSNNIVSGLKYTNVVWKTGVRVDNAKRMLG 180
            IP     + K   FTLKEGS+Y L F+F V+NNIVSGL+Y+N VWKTG++V + K MLG
Sbjct: 108 TIPENGKPASKGPWFTLKEGSKYTLIFTFRVTNNIVSGLQYSNTVWKTGIKVYSRKEMLG 167

Query: 181 TYSXXXXXXXXXXXXXXXXSGLFARGTYSARTKFVDDDRKCYLDATYHFEIQKNW 235
           T+S                SGL  RG+YS ++KFVDDD +CYL+  Y F+I+KNW
Sbjct: 168 TFSPQAEPYTHVMFEETAPSGLLVRGSYSVKSKFVDDDNQCYLENNYTFDIRKNW 222