Miyakogusa Predicted Gene
- Lj4g3v2573890.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2573890.1 Non Chatacterized Hit- tr|I1K3P3|I1K3P3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.29530
PE,83.05,0,Rho_GDI,RHO protein GDP dissociation inhibitor; E set
domains,Immunoglobulin E-set; seg,NULL; no des,CUFF.51145.1
(711 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72256 similar to UniRef100_A7Q9J6 Cluster: Chromosome... 1269 0.0
gnl|LJGI|TC61752 similar to UniRef100_A7Q9J6 Cluster: Chromosome... 1179 0.0
gnl|LJGI|TC62824 homologue to UniRef100_Q705X3 Cluster: Rho GDP ... 72 5e-12
>gnl|LJGI|TC72256 similar to UniRef100_A7Q9J6 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (62%)
Length = 775
Score = 1269 bits (640), Expect = 0.0
Identities = 640/640 (100%)
Strand = Plus / Plus
Query: 1 atgtctgctgctgttggagctgtgtccacaaccaaagatgttacattcaatgctcattta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 atgtctgctgctgttggagctgtgtccacaaccaaagatgttacattcaatgctcattta 195
Query: 61 gaggaagagctcaaaaacaaaggaatcaacaaggttgatgaggaacaagaccagctcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gaggaagagctcaaaaacaaaggaatcaacaaggttgatgaggaacaagaccagctcctt 255
Query: 121 tacaatgatgctgctgaagaaactgagctagaagaggaagattccaagttggaattggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tacaatgatgctgctgaagaaactgagctagaagaggaagattccaagttggaattggat 315
Query: 181 cttggccctcagttttccctcaaggaacagcttgagaaagataaagatgatgagagtttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 cttggccctcagttttccctcaaggaacagcttgagaaagataaagatgatgagagtttg 375
Query: 241 aggaaatggaaggagcaacttcttggaagtgttgacatgcctgctgttggagagaacaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aggaaatggaaggagcaacttcttggaagtgttgacatgcctgctgttggagagaacaaa 435
Query: 301 gagccagaagtgaagatattgagcctcaccatcatatgccaaggaaggcctgaactcctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gagccagaagtgaagatattgagcctcaccatcatatgccaaggaaggcctgaactcctc 495
Query: 361 ttgccaattccattcactaccaattcaaagaagagtagtatcttcacccttaaggaagga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ttgccaattccattcactaccaattcaaagaagagtagtatcttcacccttaaggaagga 555
Query: 421 agccggtaccgtctgaaattctccttcactgtctctaacaacattgtttccggcctcaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 agccggtaccgtctgaaattctccttcactgtctctaacaacattgtttccggcctcaaa 615
Query: 481 tacaccaatgttgtttggaaaactggagttagagtggacaacgcaaaaagaatgttggga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tacaccaatgttgtttggaaaactggagttagagtggacaacgcaaaaagaatgttggga 675
Query: 541 acatacagccctcaacaggaaccgtatacatatgaattagaagaggaaactaccccttct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 acatacagccctcaacaggaaccgtatacatatgaattagaagaggaaactaccccttct 735
Query: 601 ggcttatttgctaggggaacctattcagcaagaaccaagt 640
||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 ggcttatttgctaggggaacctattcagcaagaaccaagt 775
>gnl|LJGI|TC61752 similar to UniRef100_A7Q9J6 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (72%)
Length = 742
Score = 1179 bits (595), Expect = 0.0
Identities = 613/619 (99%)
Strand = Plus / Plus
Query: 93 ggttgatgaggaacaagaccagctcctttacaatgatgctgctgaagaaactgagctaga 152
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggttgatgtggagcaagaccagctcctttacaatgatgctgctgaagaaactgagctaga 61
Query: 153 agaggaagattccaagttggaattggatcttggccctcagttttccctcaaggaacagct 212
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 62 agaggaagattccaagttggaattggatcttggccctcagtattccctcaaggaacagct 121
Query: 213 tgagaaagataaagatgatgagagtttgaggaaatggaaggagcaacttcttggaagtgt 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tgagaaagataaagatgatgagagtttgaggaaatggaaggagcaacttcttggaagtgt 181
Query: 273 tgacatgcctgctgttggagagaacaaagagccagaagtgaagatattgagcctcaccat 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tgacatgcctgctgttggagagaacaaagagccagaagtgaagatattgagcctcaccat 241
Query: 333 catatgccaaggaaggcctgaactcctcttgccaattccattcactaccaattcaaagaa 392
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 catatgccgaggaaggcctgaactcctcttgccaattccattcactaccaattcaaagaa 301
Query: 393 gagtagtatcttcacccttaaggaaggaagccggtaccgtctgaaattctccttcactgt 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gagtagtatcttcacccttaaggaaggaagccggtaccgtctgaaattctccttcactgt 361
Query: 453 ctctaacaacattgtttccggcctcaaatacaccaatgttgtttggaaaactggagttag 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ctctaacaacattgtttccggcctcaaatacaccaatgttgtttggaaaactggagttag 421
Query: 513 agtggacaacgcaaaaagaatgttgggaacatacagccctcaacaggaaccgtatacata 572
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 422 agtggacaacgcaaaaagaatgttgggaacatacagccctcaacgggaaccgtatacata 481
Query: 573 tgaattagaagaggaaactaccccttctggcttatttgctaggggaacctattcagcaag 632
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tgaattggaagaggaaactaccccttctggcttatttgctaggggaacctattcagcaag 541
Query: 633 aaccaagtttgtagatgatgatcgcaaatgctacttggatgccacttaccactttgaaat 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 aaccaagtttgtagatgatgatcgcaaatgctacttggatgccacttaccactttgaaat 601
Query: 693 tcagaagaattggcctgca 711
|||||||||||||||||||
Sbjct: 602 tcagaagaattggcctgca 620
>gnl|LJGI|TC62824 homologue to UniRef100_Q705X3 Cluster: Rho GDP dissociation
inhibitor 2; n=1; Medicago truncatula|Rep: Rho GDP
dissociation inhibitor 2 - Medicago truncatula (Barrel
medic), partial (85%)
Length = 1236
Score = 71.9 bits (36), Expect = 5e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 226 gatgatgagagtttgaggaaatggaaggagcaacttcttggaagtgttgacatgcctgct 285
||||||||||| ||||||| ||||||||||| ||||||||||||||||| || ||||
Sbjct: 558 gatgatgagagcttgaggaggtggaaggagcagcttcttggaagtgttgatataaatgct 617
Query: 286 gttggaga 293
||||||||
Sbjct: 618 gttggaga 625