Miyakogusa Predicted Gene
- Lj4g3v2370480.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2370480.2 Non Chatacterized Hit- tr|I1KN21|I1KN21_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,79.05,0,no
description,Galactose oxidase, beta-propeller; no
description,Kelch-type beta propeller; RANGAP1-,CUFF.50850.2
(2121 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74007 similar to UniRef100_A7NW70 Cluster: Chromosome... 569 e-161
gnl|LJGI|BP056370 similar to UniRef100_A7NW70 Cluster: Chromosom... 323 3e-87
gnl|LJGI|TC63231 similar to UniRef100_A7PLS7 Cluster: Chromosome... 244 2e-63
gnl|LJGI|FS325905 similar to UniRef100_A7NW70 Cluster: Chromosom... 94 4e-18
>gnl|LJGI|TC74007 similar to UniRef100_A7NW70 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (14%)
Length = 535
Score = 569 bits (287), Expect = e-161
Identities = 309/315 (98%), Gaps = 1/315 (0%)
Strand = Plus / Plus
Query: 1808 tggctgacacactgaaggaaatggaatcgcttagagagaagcttggaagtctagagtttt 1867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 tggctgacacactgaaggaaatggaatcgcttagagagaagcttggaagtctagagtttt 73
Query: 1868 cccaagaagaggccaacaacctatcaaacattgtccactctgataacgttcggctcgagc 1927
||| ||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 74 ccctagaagaggccaaccacctatccaaccttgtccactctgataacgttcggctcgagc 133
Query: 1928 atgatgtggccttcctcaaggctgttttagatgatacacagaaggaattgcattctacaa 1987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 atgatgtggccttcctcaaggctgttttagatgatacacagaaggaattgcattctacaa 193
Query: 1988 ggggagttattgcaggagaaagagctcgggcattccaacttcagtatgaagtatttcatc 2047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ggggagttattgcaggagaaagagctcgggcattccaacttcagtatgaagtatttcatc 253
Query: 2048 tcaaacagagattgcaatctatggaaaatcgagcatctacacccagga-aaccatttcac 2106
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 254 tcaaacagagattgctatctatggaaaatcgagcatctacacccaggacaaccatttcac 313
Query: 2107 catgtgcaatgaagt 2121
|||||||||||||||
Sbjct: 314 catgtgcaatgaagt 328
>gnl|LJGI|BP056370 similar to UniRef100_A7NW70 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (12%)
Length = 462
Score = 323 bits (163), Expect = 3e-87
Identities = 239/259 (92%), Gaps = 4/259 (1%)
Strand = Plus / Minus
Query: 1841 gagagaagcttggaagtctagagttttcccaagaagaggccaacaacctatcaaacattg 1900
||||||||||||||| ||||||| |||||| |||||||||| |||||||||| ||| ||
Sbjct: 462 gagagaagcttggaaatctagagatttccccagaagaggcccacaacctatccaaccctg 403
Query: 1901 tccactctgataacgttcggctcgagcatgatgtggccttcctcaaggctgttttagatg 1960
||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tcccctctgaaaacgttcggctcgagcatgatgtggccttcctcaaggctgttttagatg 343
Query: 1961 ataca-cagaaggaattgca-ttctacaaggggagttattgca-ggagaaagagctcggg 2017
||||| ||||||| |||||| || || ||||||| |||||||| ||||||||||||||||
Sbjct: 342 atacaccagaagg-attgcacttgtaaaaggggacttattgcacggagaaagagctcggg 284
Query: 2018 cattccaacttcagtatgaagtatttcatctcaaacagagattgcaatctatggaaaatc 2077
|||||| ||||||||||||||||||||||||| | |||||||||| ||||||||||||||
Sbjct: 283 cattcccacttcagtatgaagtatttcatctccaccagagattgccatctatggaaaatc 224
Query: 2078 gagcatctacacccaggaa 2096
|||||||||||||||||||
Sbjct: 223 gagcatctacacccaggaa 205
>gnl|LJGI|TC63231 similar to UniRef100_A7PLS7 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 1652
Score = 244 bits (123), Expect = 2e-63
Identities = 218/233 (93%), Gaps = 14/233 (6%)
Strand = Plus / Minus
Query: 1903 cactctgataacgttcggctcgagcatgatgtggccttcctcaaggctgttttagatgat 1962
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1652 cactctgataacgttcggctcgagcatgatgtgnccttcctcaaggctgttttagatgat 1593
Query: 1963 acacagaaggaattgcattctacaaggggagttattg-caggagaaagagctc-gggcat 2020
||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 1592 acacagaaggaattgcattctacaaggggagttattgccaggagaaagagctctgggcat 1533
Query: 2021 -tccaa-cttcagta-tgaagtat-ttca-tctcaaa-cagagat-tgcaatcta-tgga 2072
||||| |||||||| |||||||| |||| ||||||| ||||||| ||||||||| ||||
Sbjct: 1532 ntccaagcttcagtactgaagtatcttcattctcaaancagagatntgcaatctactgga 1473
Query: 2073 aaa-tcgagcatctacaccca-ggaaaccatttcaccatg--tgcaatgaagt 2121
||| ||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 1472 aaactcgagcatctacacccacggaaaccatttcaccatgnntgcaatgaagt 1420
>gnl|LJGI|FS325905 similar to UniRef100_A7NW70 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 682
Score = 93.7 bits (47), Expect = 4e-18
Identities = 101/119 (84%)
Strand = Plus / Plus
Query: 1 atgtttggcttctctcgtcgccgcatgaaacttggcaggttgaaggttcagctttctgat 60
|||||||| ||||||||| | | ||||||||||||||| ||||||||||||||||||||
Sbjct: 477 atgtttggtttctctcgtaggcacatgaaacttggcagattgaaggttcagctttctgac 536
Query: 61 ggcactcagggaactagcagccctgtaaggcatctcaaaagaaatgcaaattccaatgg 119
|| ||||||||||| || ||||| ||||| | ||| ||||||| ||| ||||||||
Sbjct: 537 aatacccagggaactagaagtcctgtgaggcaccacaagagaaatggaaactccaatgg 595